primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG TTAGCTGGTGTTGAAGCTCC 20 20 55.0 50.0 58.1 57.8 0.0 0.0 0.313924 65 318 311-323 1.000000 79.5 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 GATCCACTTGGCTACATCCG CTGGTGTTGAAGCTCCTTCT 20 20 55.0 50.0 58.1 57.4 0.0 6.5 0.686839 65 318 307-319 1.000000 76.6 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 CGCATGGTGGATTCACAATC TTAGCTGGTGTTGAAGCTCC 20 20 50.0 50.0 57.5 57.8 6.4 0.0 0.665228 65 318 340-352 1.000000 76.5 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 GATTCACAATCCACCGCCTT TTAGCTGGTGTTGAAGCTCC 20 20 50.0 50.0 58.5 57.8 0.0 0.0 0.721330 65 318 331-343 1.000000 76.1 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 GATCCACTTGGCTACATCCG TAGCTGGTGTTGAAGCTCCT 20 20 55.0 50.0 58.1 58.6 0.0 0.0 0.776837 65 318 310-322 1.000000 75.8 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAGTCGCACGTTGCTTTCTA TGGTCCTGTTATTCGGAGGT 20 20 45.0 50.0 58.1 58.1 8.1 0.0 0.192340 6025 7092 1156-1157 1.000000 83.1 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6025 7092 1141-1142 1.000000 83.0 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AAGTCGCACGTTGCTTTCTA TTCGGAGGTTCGAATCCTTC 20 20 45.0 50.0 58.1 57.3 8.1 16.9 0.806797 6025 7092 1145-1146 1.000000 78.2 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AAGTCGCACGTTGCTTTCTA TAAGGCAACCGGTTTTGGTC 20 20 45.0 50.0 58.1 58.7 8.1 19.6 0.818817 6025 7092 1171-1172 1.000000 78.0 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 CGTTGCTTTCTACCACATCG TGGTCCTGTTATTCGGAGGT 20 20 50.0 50.0 57.2 58.1 0.0 0.0 0.840738 6025 7092 1148-1149 1.000000 77.9 psbI-trnS-GCU_p1 psbI-trnS-GCU 1 GTAATCCTGGGCGTGATGAA TGGACTAAAGCGTCGGATTG 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.330166 8482 8593 203-208 1.000000 81.6 psbI-trnS-GCU_p2 psbI-trnS-GCU 2 GTAATCCTGGGCGTGATGAA GTGGACTAAAGCGTCGGATT 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.331554 8482 8593 204-209 1.000000 81.6 psbI-trnS-GCU_p3 psbI-trnS-GCU 3 GTAATCCTGGGCGTGATGAA GGGTTCGAATCCCTCTCTCT 20 20 50.0 55.0 57.7 58.2 0.0 17.2 0.542512 8482 8593 153-158 1.000000 81.3 psbI-trnS-GCU_p4 psbI-trnS-GCU 4 GTAATCCTGGGCGTGATGAA TTCGAATCCCTCTCTCTCCG 20 20 50.0 55.0 57.7 58.3 0.0 0.0 0.644045 8482 8593 150-155 1.000000 80.6 psbI-trnS-GCU_p5 psbI-trnS-GCU 5 GTAATCCTGGGCGTGATGAA ATTGGGAGAGATGGCTGAGT 20 20 50.0 50.0 57.7 58.1 0.0 0.0 0.435031 8482 8593 222-227 1.000000 80.4 atpH-atpI_p1 atpH-atpI 1 ATAACGGAAGCGGCAGAAAT TTTTTGCAACTTTAGCCGCG 20 20 45.0 45.0 58.0 58.5 1.4 0.0 0.556109 14638 15454 864-905 1.000000 80.9 atpH-atpI_p2 atpH-atpI 2 TACCTTGACCAACTCCAGGT TTTTTGCAACTTTAGCCGCG 20 20 50.0 45.0 57.9 58.5 0.0 0.0 0.630002 14638 15454 920-961 1.000000 80.2 atpH-atpI_p3 atpH-atpI 3 AACGGAAGCGGCAGAAATAA TTTTTGCAACTTTAGCCGCG 20 20 45.0 45.0 58.2 58.5 1.4 0.0 0.701648 14638 15454 862-903 1.000000 79.7 atpH-atpI_p4 atpH-atpI 4 AATAACGGAAGCGGCAGAAA TTTTTGCAACTTTAGCCGCG 20 20 45.0 45.0 58.2 58.5 1.4 0.0 0.701648 14638 15454 865-906 1.000000 79.7 atpH-atpI_p5 atpH-atpI 5 GCAGTACCTTGACCAACTCC TTTTTGCAACTTTAGCCGCG 20 20 55.0 45.0 58.2 58.5 0.0 0.0 0.708039 14638 15454 924-965 1.000000 79.6 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 AGAGATGTCCTGAACCGCTA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.151367 32354 32884 618-619 1.000000 80.9 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 AGATGTCCTGAACCGCTAGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.151367 32354 32884 616-617 1.000000 80.9 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 AGAGATGTCCTGAACCGCTA CCATGGCGTTACTCTACCAC 20 20 50.0 55.0 57.9 58.1 0.0 0.0 0.209464 32354 32884 597-598 1.000000 80.5 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 AGATGTCCTGAACCGCTAGA CCATGGCGTTACTCTACCAC 20 20 50.0 55.0 57.9 58.1 0.0 0.0 0.209464 32354 32884 595-596 1.000000 80.5 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 GATGTCCTGAACCGCTAGAC GAACCGATGACTTACGCCTT 20 20 55.0 50.0 57.8 58.0 0.0 0.0 0.217323 32354 32884 615-616 1.000000 80.3 pafI-trnS-UCC_p1 pafI-trnS-UCC 1 TCTCCTGAGGTTGTGGGAAT CCCTCGGTAAACAAAAGCCT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.139155 45493 45960 628-631 1.000000 80.7 pafI-trnS-UCC_p2 pafI-trnS-UCC 2 TCTCCTGAGGTTGTGGGAAT ACGGAAAGAGAGGGATTCGA 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.196141 45493 45960 649-652 1.000000 80.2 pafI-trnS-UCC_p3 pafI-trnS-UCC 3 TCTCCTGAGGTTGTGGGAAT TTCCAATGCTACGCCTTGAA 20 20 50.0 45.0 58.0 57.8 0.0 5.6 0.237456 45493 45960 599-602 1.000000 80.0 pafI-trnS-UCC_p4 pafI-trnS-UCC 4 TTCTCCTGAGGTTGTGGGAA CCCTCGGTAAACAAAAGCCT 20 20 50.0 50.0 58.2 58.1 0.0 0.0 0.279934 45493 45960 629-632 1.000000 79.5 pafI-trnS-UCC_p5 pafI-trnS-UCC 5 TTTCTCCTGAGGTTGTGGGA CCCTCGGTAAACAAAAGCCT 20 20 50.0 50.0 58.2 58.1 0.0 0.0 0.279934 45493 45960 630-633 1.000000 79.5 rps4-trnT-ACA_p1 rps4-trnT-ACA 1 AGTTAGTCCCGGTAAAGCCC CTCAGAGGTTAGAGCATCGC 20 20 55.0 55.0 59.1 57.9 0.0 0.0 1.225254 46962 47353 522-544 1.000000 71.4 rps4-trnT-ACA_p2 rps4-trnT-ACA 2 AGTTAGTCCCGGTAAAGCCC GATGGTCATCGGTTCGACTC 20 20 55.0 55.0 59.1 58.2 0.0 0.0 1.251064 46962 47353 491-513 1.000000 71.3 rps4-trnT-ACA_p3 rps4-trnT-ACA 3 TCACTTCCGGATCTAGGTCT CTCAGAGGTTAGAGCATCGC 20 20 50.0 55.0 56.9 57.9 4.1 0.0 1.258465 46962 47353 548-570 1.000000 71.1 rps4-trnT-ACA_p4 rps4-trnT-ACA 4 CCCCAGACGGCGTATTTTT CTCAGAGGTTAGAGCATCGC 19 20 52.6 55.0 58.1 57.9 14.7 0.0 1.270002 46962 47353 504-526 1.000000 71.1 rps4-trnT-ACA_p5 rps4-trnT-ACA 5 TCACTTCCGGATCTAGGTCT GATGGTCATCGGTTCGACTC 20 20 50.0 55.0 56.9 58.2 4.1 0.0 1.284276 46962 47353 517-539 1.000000 70.9 trnM-CAU-atpE_p1 trnM-CAU-atpE 1 CACAAAGCAGTCGGTCTCTT GGTCGAGGCTATCAATGCAA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.175361 53409 53554 292-294 1.000000 80.2 trnM-CAU-atpE_p2 trnM-CAU-atpE 2 TTCACAAAGCAGTCGGTCTC GGTCGAGGCTATCAATGCAA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.180576 53409 53554 294-296 1.000000 80.2 trnM-CAU-atpE_p3 trnM-CAU-atpE 3 TATTGCTTTCATACGGCGGG GGTCGAGGCTATCAATGCAA 20 20 50.0 50.0 58.4 58.0 13.2 0.0 0.457767 53409 53554 226-228 1.000000 78.5 trnM-CAU-atpE_p4 trnM-CAU-atpE 4 ATTCACAAAGCAGTCGGTCT GGTCGAGGCTATCAATGCAA 20 20 45.0 50.0 57.4 58.0 0.0 0.0 0.597271 53409 53554 295-297 1.000000 76.8 trnM-CAU-atpE_p5 trnM-CAU-atpE 5 ACAAAGCAGTCGGTCTCTTT GGTCGAGGCTATCAATGCAA 20 20 45.0 50.0 57.4 58.0 0.0 0.0 0.668505 53409 53554 291-293 1.000000 76.3 rbcL-psbE_p1 rbcL-psbE 1 CGTGAAGCTTGCAAATGGAG CAACCCGCAATGAATAGGGA 20 20 50.0 50.0 58.0 57.9 2.1 6.4 0.078196 57644 58810 1354-1364 1.000000 81.3 rbcL-psbE_p2 rbcL-psbE 2 CGTGAAGCTTGCAAATGGAG ACTGACGAATAACCAACCCG 20 20 50.0 50.0 58.0 57.9 2.1 0.0 0.115811 57644 58810 1367-1377 1.000000 81.0 rbcL-psbE_p3 rbcL-psbE 3 GTTCAAACCGGTAGACACGA CAACCCGCAATGAATAGGGA 20 20 50.0 50.0 57.9 57.9 8.0 6.4 0.189930 57644 58810 1286-1296 1.000000 80.5 rbcL-psbE_p4 rbcL-psbE 4 AGTTCAAACCGGTAGACACG CAACCCGCAATGAATAGGGA 20 20 50.0 50.0 57.9 57.9 8.0 6.4 0.195816 57644 58810 1287-1297 1.000000 80.5 rbcL-psbE_p5 rbcL-psbE 5 CGTGAAGCTTGCAAATGGAG ACGAATAACCAACCCGCAAT 20 20 50.0 45.0 58.0 58.2 2.1 0.0 0.197883 57644 58810 1363-1373 1.000000 80.3 psbT-pbf1_p1 psbT-pbf1 1 ACCACGATCGAACCTATGGA TCGCCATCTCCATATCTGGT 20 20 50.0 50.0 58.2 58.0 24.3 0.0 0.243892 75100 75174 305-305 1.000000 79.1 psbT-pbf1_p2 psbT-pbf1 2 ACCACGATCGAACCTATGGA CCCTAGTCGCCATCTCCATA 20 20 50.0 55.0 58.2 58.1 24.3 0.0 0.303704 75100 75174 311-311 1.000000 78.6 psbT-pbf1_p3 psbT-pbf1 3 CGATCGAACCTATGGAAGCA TCGCCATCTCCATATCTGGT 20 20 50.0 50.0 57.5 58.0 10.3 0.0 0.524509 75100 75174 301-301 1.000000 76.9 psbT-pbf1_p4 psbT-pbf1 4 ACGATCGAACCTATGGAAGC TCGCCATCTCCATATCTGGT 20 20 50.0 50.0 57.5 58.0 24.3 0.0 0.526224 75100 75174 302-302 1.000000 76.8 psbT-pbf1_p5 psbT-pbf1 5 CGATCGAACCTATGGAAGCA CCCTAGTCGCCATCTCCATA 20 20 50.0 55.0 57.5 58.1 10.3 0.0 0.584321 75100 75174 307-307 1.000000 76.4 rpl16_p1 rpl16 1 ACCCAATATCTATATATCCATATCC ACCATTTTATTTGGTGAAATTGCT 25 24 32.0 29.2 52.9 56.3 0.0 0.0 15.835915 82114 83587 1523-1531 1.000000 41.4 rpl16_p2 rpl16 2 ACCCAATATCTATATATCCATATCC ACCATTTTATTTGGTGAAATTGC 25 23 32.0 30.4 52.9 54.9 0.0 0.0 16.219438 82114 83587 1523-1531 1.000000 41.4 rpl16_p3 rpl16 3 ACCCAATATCTATATATCCATATCC CCATTTTATTTGGTGAAATTGCT 25 23 32.0 30.4 52.9 54.6 0.0 0.0 16.484827 82114 83587 1522-1530 1.000000 41.4 rpl16_p4 rpl16 4 ACCCAATATCTATATATCCATATCC TCGATTGACCATTTTATTTGG 25 21 32.0 33.3 52.9 52.5 0.0 0.0 16.650152 82114 83587 1530-1538 1.000000 41.4 rpl16_p5 rpl16 5 ACCCAATATCTATATATCCATATCC TTCGATTGACCATTTTATTTGG 25 22 32.0 31.8 52.9 53.4 0.0 0.0 16.761079 82114 83587 1531-1539 1.000000 41.4 rpl22-rps19_p1 rpl22-rps19 1 GCGATCTCTTCCAGGTCTTC TGGTAGACATGCGAGAAACG 20 20 55.0 50.0 57.8 58.0 0.0 0.0 0.226630 84845 85049 273-292 1.000000 83.6 rpl22-rps19_p2 rpl22-rps19 2 TAGGCGATCTCTTCCAGGTC TGGTAGACATGCGAGAAACG 20 20 55.0 50.0 58.3 58.0 0.0 0.0 0.315574 84845 85049 276-295 1.000000 82.8 rpl22-rps19_p3 rpl22-rps19 3 ATAGGCGATCTCTTCCAGGT TGGTAGACATGCGAGAAACG 20 20 50.0 50.0 57.6 58.0 0.0 0.0 0.399426 84845 85049 277-296 1.000000 82.1 rpl22-rps19_p4 rpl22-rps19 4 GCGATCTCTTCCAGGTCTTC GGAGAATTCGCACCTACTCG 20 20 55.0 55.0 57.8 58.2 0.0 11.5 0.375980 84845 85049 299-318 1.000000 81.9 rpl22-rps19_p5 rpl22-rps19 5 GCGATCTCTTCCAGGTCTTC GGGAGAATTCGCACCTACTC 20 20 55.0 55.0 57.8 57.8 0.0 11.5 0.444031 84845 85049 300-319 1.000000 81.4 rps19_p1 rps19 1 TCGGGCTTTGAAAACAGACA CGTTTTATTCTTCGTCGCCG 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.099313 85050 85328 721-870 1.000000 83.7 rps19_p2 rps19 2 TCGGGCTTTGAAAACAGACA GGGTAGAGCCGGATCTAAGT 20 20 45.0 55.0 58.0 58.0 0.0 29.9 0.047339 85050 85328 908-1057 1.000000 83.3 rps19_p3 rps19 3 TCGGGCTTTGAAAACAGACA TGGGTAGAGCCGGATCTAAG 20 20 45.0 55.0 58.0 58.0 0.0 29.9 0.048763 85050 85328 909-1058 1.000000 83.3 rps19_p4 rps19 4 TCGGGCTTTGAAAACAGACA GAGCCGGATCTAAGTGTTGG 20 20 45.0 55.0 58.0 58.1 0.0 13.7 0.104236 85050 85328 903-1052 1.000000 82.8 rps19_p5 rps19 5 TCGGGCTTTGAAAACAGACA GAGGGTAAATCGGCCACATT 20 20 45.0 50.0 58.0 57.9 0.0 2.2 0.098344 85050 85328 1021-1170 1.000000 82.5 rps19-rpl2_p1 rps19-rpl2 1 TGGTTAGCCACAAAAGGATT CGTTTTATTCTTCGTCGCCG 20 20 40.0 50.0 55.1 57.9 0.0 0.0 2.935262 85329 85454 194-324 1.000000 61.8 rps19-rpl2_p2 rps19-rpl2 2 TGGTTAGCCACAAAAGGATT CCCCTTGGGGTTATCCTACA 20 20 40.0 55.0 55.1 58.1 0.0 16.5 2.979862 85329 85454 253-383 1.000000 61.2 rps19-rpl2_p3 rps19-rpl2 3 TGGTTAGCCACAAAAGGATTT CGTTTTATTCTTCGTCGCCG 21 20 38.1 50.0 55.9 57.9 0.0 0.0 3.110066 85329 85454 194-324 1.000000 60.4 rps19-rpl2_p4 rps19-rpl2 4 TGGTTAGCCACAAAAGGATTT CCCCTTGGGGTTATCCTACA 21 20 38.1 55.0 55.9 58.1 0.0 16.5 3.154667 85329 85454 253-383 1.000000 59.8 rps19-rpl2_p5 rps19-rpl2 5 TGGTTAGCCACAAAAGGATT AAAAACCCATGACCCCTTGG 20 20 40.0 50.0 55.1 58.3 0.0 0.0 3.153186 85329 85454 265-395 1.000000 59.7 trnR-ACG-trnN-GUU_p1 trnR-ACG-trnN-GUU 1 CAGAGGATTAGAGCACGTGG CCGTTGTTCCTCAGTAGCTC 20 20 55.0 55.0 57.8 58.0 18.9 0.0 0.218238 109466 110068 695-744 1.000000 82.6 trnR-ACG-trnN-GUU_p2 trnR-ACG-trnN-GUU 2 CAGAGGATTAGAGCACGTGG TGGTCGTAGGTTCGAATCCT 20 20 55.0 50.0 57.8 58.2 18.9 18.9 0.372539 109466 110068 646-695 1.000000 81.4 trnR-ACG-trnN-GUU_p3 trnR-ACG-trnN-GUU 3 CAGAGGATTAGAGCACGTGG CGGTCGGCTGTTAACTGATT 20 20 55.0 50.0 57.8 58.3 18.9 15.9 0.493896 109466 110068 665-714 1.000000 80.4 trnR-ACG-trnN-GUU_p4 trnR-ACG-trnN-GUU 4 CAGAGGATTAGAGCACGTGG TTCCTCAGTAGCTCAGTGGT 20 20 55.0 50.0 57.8 57.7 18.9 0.0 0.526686 109466 110068 689-738 1.000000 80.1 trnR-ACG-trnN-GUU_p5 trnR-ACG-trnN-GUU 5 CAGAGGATTAGAGCACGTGG GGTTCGAATCCTACTTGGGG 20 20 55.0 55.0 57.8 57.7 18.9 0.0 0.543107 109466 110068 638-687 1.000000 80.0 ycf1_p1 ycf1 1 AGGCTGTACGAAATGAAGTGT ACATCTAGAACAAAGGATTCTCT 21 23 42.9 34.8 57.6 54.8 0.0 0.0 7.609935 111523 111642 280-280 1.000000 42.3 ycf1_p2 ycf1 2 AGGCTGTACGAAATGAAGTGT ACATCTAGAACAAAGGATTCTCTT 21 24 42.9 33.3 57.6 55.5 0.0 0.0 7.870031 111523 111642 280-280 1.000000 42.3 ycf1_p3 ycf1 3 GGCTGTACGAAATGAAGTGTC ACATCTAGAACAAAGGATTCTCT 21 23 47.6 34.8 57.3 54.8 0.0 0.0 7.931602 111523 111642 279-279 1.000000 42.3 ycf1_p4 ycf1 4 AGGCTGTACGAAATGAAGTGT AGTACATCTAGAACAAAGGATTCTCT 21 26 42.9 34.6 57.6 57.4 0.0 0.0 8.005099 111523 111642 283-283 1.000000 42.3 ycf1_p5 ycf1 5 AGGCTGTACGAAATGAAGTGT ACATCTAGAACAAAGGATTCTC 21 22 42.9 36.4 57.6 53.3 0.0 0.0 8.110835 111523 111642 280-280 1.000000 42.3 trnL-UAG-rpl32_p1 trnL-UAG-rpl32 1 AGCGTGTCTACCGATTTCAC CCGCGGTTAAAGCTTTTTCC 20 20 50.0 50.0 58.0 58.3 0.0 19.5 0.314363 126147 126840 806-806 0.500000 57.5 trnL-UAG-rpl32_p2 trnL-UAG-rpl32 2 CAGCGTGTCTACCGATTTCA CCGCGGTTAAAGCTTTTTCC 20 20 50.0 50.0 58.0 58.3 0.0 19.5 0.315734 126147 126840 807-807 0.500000 57.5 trnL-UAG-rpl32_p3 trnL-UAG-rpl32 3 TCCTAAGAGCAGCGTGTCTA CCGCGGTTAAAGCTTTTTCC 20 20 50.0 50.0 57.9 58.3 0.0 19.5 0.430810 126147 126840 816-816 0.500000 56.6 trnL-UAG-rpl32_p4 trnL-UAG-rpl32 4 CCTAAGAGCAGCGTGTCTAC CCGCGGTTAAAGCTTTTTCC 20 20 55.0 50.0 57.8 58.3 0.0 19.5 0.502828 126147 126840 815-815 0.500000 56.0 trnL-UAG-rpl32_p5 trnL-UAG-rpl32 5 CTAAGAGCAGCGTGTCTACC CCGCGGTTAAAGCTTTTTCC 20 20 55.0 50.0 57.8 58.3 0.0 19.5 0.502828 126147 126840 814-814 0.500000 56.0