feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GUG tRNA trnH-GUG trnH-GUG 11 84 -1 74 LSC 0.000000 0 0 257 51 no 0.000000 1 0.000000 0.000000 1.000000 22.600000 IGS_001 igs trnH-GUG|psbA trnH-GUG-psbA 85 490 0 406 LSC 0.008210 8 20 300 189 yes 0.714286 6 0.833333 0.008611 0.967980 59.500000 psbA gene psbA psbA 491 1552 -1 1062 LSC 0.001614 4 0 145 136 no 0.428571 4 0.750000 0.001614 1.000000 44.400000 IGS_002 igs psbA|trnK-UUU psbA-trnK-UUU 1553 1776 0 224 LSC 0.005102 2 0 266 53 no 0.142857 3 0.333333 0.005102 1.000000 28.800000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1777 1812 -1 36 LSC 0.000000 0 0 77 17 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 IGS_003 igs trnK-UUU|matK trnK-UUU-matK 1813 2104 0 292 LSC 0.009785 5 0 113 21 no 0.142857 4 0.250000 0.009785 1.000000 29.500000 matK gene matK matK 2105 3625 -1 1521 LSC 0.002567 11 0 2 14 no 0.714286 6 0.833333 0.002567 1.000000 40.600000 IGS_004 igs matK|trnK-UUU matK-trnK-UUU 3626 4351 0 726 LSC 0.002361 5 1 282 49 no 0.571429 5 0.800000 0.002363 1.000000 41.500000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4352 4389 -1 38 LSC 0.000000 0 0 53 11 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 IGS_005 igs trnK-UUU|rps16 trnK-UUU-rps16 4390 5151 0 762 LSC 0.005774 9 39 91 172 yes 0.714286 6 0.833333 0.004825 1.000000 55.200000 rps16 gene rps16 rps16 5152 6276 -1 1125 LSC 0.001947 5 8 107 45 no 0.714286 6 0.833333 0.001951 1.000000 44.100000 IGS_006 igs rps16|trnQ-UUG rps16-trnQ-UUG 6277 7270 0 994 LSC 0.004599 13 22 133 184 no 0.714286 6 0.833333 0.004670 0.993964 54.500000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 7271 7342 -1 72 LSC 0.000000 0 0 231 112 no 0.000000 1 0.000000 0.000000 1.000000 27.200000 IGS_007 igs trnQ-UUG|psbK trnQ-UUG-psbK 7343 7706 0 364 LSC 0.003140 2 7 300 226 no 0.142857 3 0.333333 0.003160 1.000000 42.200000 psbK gene psbK psbK 7707 7886 1 180 LSC 0.000000 0 0 21 46 no 0.000000 1 0.000000 0.000000 1.000000 20.300000 IGS_008 igs psbK|psbI psbK-psbI 7887 8298 0 412 LSC 0.004623 5 7 201 145 no 0.714286 6 0.833333 0.004703 0.983010 50.500000 psbI gene psbI psbI 8299 8409 1 111 LSC 0.000000 0 0 150 34 no 0.000000 1 0.000000 0.000000 1.000000 21.300000 IGS_009 igs psbI|trnS-GCU psbI-trnS-GCU 8410 8543 0 134 LSC 0.002132 1 1 261 144 no 0.285714 3 0.666667 0.002135 1.000000 37.700000 trnS-GCU tRNA trnS-GCU trnS-GCU 8544 8631 -1 88 LSC 0.000000 0 0 99 56 no 0.000000 1 0.000000 0.000000 1.000000 22.900000 IGS_010 igs trnS-GCU|trnC-GCA trnS-GCU-trnC-GCA 8632 9144 0 513 LSC 0.004456 6 0 187 199 no 0.571429 5 0.800000 0.004456 1.000000 51.400000 trnC-GCA tRNA trnC-GCA trnC-GCA 9145 9215 1 71 LSC 0.000000 0 0 45 128 no 0.000000 1 0.000000 0.000000 1.000000 22.100000 IGS_011 igs trnC-GCA|petN trnC-GCA-petN 9216 10069 0 854 LSC 0.004639 8 194 116 45 no 0.714286 6 0.833333 0.004836 0.994145 48.300000 petN gene petN petN 10070 10159 1 90 LSC 0.006349 1 0 115 300 no 0.000000 2 0.000000 0.006349 1.000000 31.600000 IGS_012 igs petN|psbM petN-psbM 10160 10650 0 491 LSC 0.001164 1 0 44 120 no 0.000000 2 0.000000 0.001164 1.000000 26.800000 psbM gene psbM psbM 10651 10755 -1 105 LSC 0.000000 0 0 183 15 no 0.000000 1 0.000000 0.000000 1.000000 19.900000 IGS_013 igs psbM|trnD-GUC psbM-trnD-GUC 10756 11416 0 661 LSC 0.003746 7 8 288 106 no 0.714286 6 0.833333 0.003792 0.987897 50.400000 trnD-GUC tRNA trnD-GUC trnD-GUC 11417 11490 -1 74 LSC 0.000000 0 0 235 32 no 0.000000 1 0.000000 0.000000 1.000000 21.100000 IGS_014 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 11491 11603 0 113 LSC 0.005057 2 0 300 300 no 0.285714 3 0.666667 0.005057 1.000000 43.600000 trnY-GUA tRNA trnY-GUA trnY-GUA 11604 11687 -1 84 LSC 0.000000 0 0 43 297 no 0.000000 1 0.000000 0.000000 1.000000 22.000000 IGS_015 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 11688 11790 0 103 LSC 0.000000 0 0 127 194 no 0.000000 1 0.000000 0.000000 1.000000 28.300000 trnE-UUC tRNA trnE-UUC trnE-UUC 11791 11862 -1 72 LSC 0.000000 0 0 230 122 no 0.000000 1 0.000000 0.000000 1.000000 27.900000 IGS_016 igs trnE-UUC|rpoB trnE-UUC-rpoB 11863 12834 0 972 LSC 0.003135 7 23 300 300 yes 0.714286 6 0.833333 0.003171 0.997942 58.500000 rpoB gene rpoB rpoB 12835 16017 1 3183 LSC 0.000778 7 0 87 34 no 0.714286 6 0.833333 0.000778 1.000000 38.200000 IGS_017 igs rpoB|rpoC1 rpoB-rpoC1 16018 16043 0 26 LSC 0.000000 0 0 300 8 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 rpoC1 gene rpoC1 rpoC1 16044 18798 1 2755 LSC 0.000899 7 0 300 134 no 0.714286 6 0.833333 0.000899 1.000000 46.600000 IGS_018 igs rpoC1|rpoC2 rpoC1-rpoC2 18799 18911 0 113 LSC 0.000000 0 0 300 21 no 0.000000 1 0.000000 0.000000 1.000000 20.300000 rpoC2 gene rpoC2 rpoC2 18912 23027 1 4116 LSC 0.002013 23 0 300 109 no 0.714286 6 0.833333 0.002013 1.000000 43.300000 IGS_019 igs rpoC2|rps2 rpoC2-rps2 23028 23283 0 256 LSC 0.004464 3 1 2 98 no 0.285714 4 0.500000 0.004480 1.000000 28.200000 rps2 gene rps2 rps2 23284 23994 1 711 LSC 0.001875 3 0 59 300 no 0.142857 3 0.333333 0.001875 1.000000 33.500000 IGS_020 igs rps2|atpI rps2-atpI 23995 24209 0 215 LSC 0.000000 0 0 39 169 no 0.000000 1 0.000000 0.000000 1.000000 21.700000 atpI gene atpI atpI 24210 24953 1 744 LSC 0.001408 2 0 254 14 no 0.142857 3 0.333333 0.001408 1.000000 29.700000 IGS_021 igs atpI|atpH atpI-atpH 24954 26088 0 1135 LSC 0.003189 10 6 36 265 no 0.714286 6 0.833333 0.003203 1.000000 44.200000 atpH gene atpH atpH 26089 26334 1 246 LSC 0.000000 0 0 139 19 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 IGS_022 igs atpH|atpF atpH-atpF 26335 26706 0 372 LSC 0.009729 7 0 300 300 no 0.285714 4 0.500000 0.009729 1.000000 47.300000 atpF gene atpF atpF 26707 27972 1 1266 LSC 0.001354 4 4 66 25 no 0.428571 4 0.750000 0.001355 1.000000 36.300000 IGS_023 igs atpF|atpA atpF-atpA 27973 28035 0 63 LSC 0.004535 1 0 300 280 no 0.142857 2 0.500000 0.004535 1.000000 40.500000 atpA gene atpA atpA 28036 29562 1 1527 LSC 0.002370 9 0 37 221 no 0.714286 6 0.833333 0.002370 1.000000 42.900000 IGS_024 igs atpA|trnR-UCU atpA-trnR-UCU 29563 29688 0 126 LSC 0.000000 0 0 117 95 no 0.000000 1 0.000000 0.000000 1.000000 25.900000 trnR-UCU tRNA trnR-UCU trnR-UCU 29689 29760 -1 72 LSC 0.000000 0 0 243 23 no 0.000000 1 0.000000 0.000000 1.000000 20.500000 IGS_025 igs trnR-UCU|trnS-CGA trnR-UCU-trnS-CGA 29761 29976 0 216 LSC 0.005291 3 20 300 134 no 0.428571 5 0.600000 0.005787 0.916667 44.300000 trnS-CGA_part2 tRNA trnS-CGA trnS-CGA 29977 30036 -1 60 LSC 0.000000 0 0 10 74 no 0.000000 1 0.000000 0.000000 1.000000 19.500000 IGS_026 igs trnS-CGA|trnS-CGA trnS-CGA-trnS-CGA 30037 30742 0 706 LSC 0.000405 1 0 70 137 no 0.142857 2 0.500000 0.000405 1.000000 33.300000 trnS-CGA_part1 tRNA trnS-CGA trnS-CGA 30743 30773 -1 31 LSC 0.000000 0 0 300 106 no 0.000000 1 0.000000 0.000000 1.000000 26.700000 IGS_027 igs trnS-CGA|trnT-GGU trnS-CGA-trnT-GGU 30774 30954 0 181 LSC 0.008945 4 0 300 168 no 0.142857 4 0.250000 0.008945 1.000000 40.800000 trnT-GGU tRNA trnT-GGU trnT-GGU 30955 31024 1 70 LSC 0.000000 0 0 25 98 no 0.000000 1 0.000000 0.000000 1.000000 20.600000 IGS_028 igs trnT-GGU|psbD trnT-GGU-psbD 31025 32227 0 1203 LSC 0.003642 10 9 95 71 no 0.714286 6 0.833333 0.003655 1.000000 47.300000 psbD gene psbD psbD 32228 33289 1 1062 LSC 0.001435 3 0 185 262 no 0.142857 4 0.250000 0.001435 1.000000 42.600000 psbC gene psbC psbC 33237 34658 1 1422 LSC 0.000804 3 0 300 300 no 0.428571 4 0.750000 0.000804 1.000000 48.700000 IGS_030 igs psbC|trnS-UGA psbC-trnS-UGA 34659 34885 0 227 LSC 0.000000 0 1 114 300 no 0.142857 2 0.500000 0.000000 1.000000 30.500000 trnS-UGA tRNA trnS-UGA trnS-UGA 34886 34968 -1 83 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_031 igs trnS-UGA|psbZ trnS-UGA-psbZ 34969 35317 0 349 LSC 0.000000 0 0 300 192 no 0.000000 1 0.000000 0.000000 1.000000 34.200000 psbZ gene psbZ psbZ 35318 35506 1 189 LSC 0.000000 0 0 300 3 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 IGS_032 igs psbZ|trnG-GCC psbZ-trnG-GCC 35507 35821 0 315 LSC 0.004535 4 7 300 82 no 0.428571 5 0.600000 0.004616 0.993651 39.300000 trnG-GCC tRNA trnG-GCC trnG-GCC 35822 35892 1 71 LSC 0.000000 0 0 99 11 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 IGS_033 igs trnG-GCC|trnfM-CAU trnG-GCC-trnfM-CAU 35893 36064 0 172 LSC 0.004430 2 0 170 222 no 0.142857 3 0.333333 0.004430 1.000000 37.600000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 36065 36138 -1 74 LSC 0.000000 0 0 119 148 no 0.000000 1 0.000000 0.000000 1.000000 27.700000 IGS_034 igs trnfM-CAU|rps14 trnfM-CAU-rps14 36139 36292 0 154 LSC 0.003711 1 0 193 300 no 0.000000 2 0.000000 0.003711 1.000000 35.700000 rps14 gene rps14 rps14 36293 36595 -1 303 LSC 0.000000 0 0 5 280 no 0.000000 1 0.000000 0.000000 1.000000 19.200000 IGS_035 igs rps14|psaB rps14-psaB 36596 36728 0 133 LSC 0.000000 0 0 300 147 no 0.000000 1 0.000000 0.000000 1.000000 29.800000 psaB gene psaB psaB 36729 38933 -1 2205 LSC 0.000777 5 0 300 300 no 0.714286 6 0.833333 0.000777 1.000000 52.600000 IGS_036 igs psaB|psaA psaB-psaA 38934 38958 0 25 LSC 0.000000 0 0 92 300 no 0.000000 1 0.000000 0.000000 1.000000 25.700000 psaA gene psaA psaA 38959 41211 -1 2253 LSC 0.001310 7 0 117 124 no 0.714286 6 0.833333 0.001310 1.000000 46.600000 IGS_037 igs psaA|ycf3 psaA-ycf3 41212 41942 0 731 LSC 0.004065 6 10 86 221 no 0.428571 4 0.750000 0.003829 1.000000 43.900000 ycf3 gene ycf3 ycf3 41943 43872 -1 1930 LSC 0.001875 9 1 67 245 no 0.714286 6 0.833333 0.001876 1.000000 44.000000 IGS_038 igs ycf3|trnS-GGA ycf3-trnS-GGA 43873 44789 0 917 LSC 0.001558 4 17 300 179 yes 0.714286 6 0.833333 0.001566 1.000000 55.300000 trnS-GGA tRNA trnS-GGA trnS-GGA 44790 44876 1 87 LSC 0.000000 0 0 165 92 no 0.000000 1 0.000000 0.000000 1.000000 25.700000 IGS_039 igs trnS-GGA|rps4 trnS-GGA-rps4 44877 45193 0 317 LSC 0.003305 3 0 252 300 no 0.428571 4 0.750000 0.003305 1.000000 44.800000 rps4 gene rps4 rps4 45194 45799 -1 606 LSC 0.000000 0 0 12 237 no 0.000000 1 0.000000 0.000000 1.000000 25.900000 IGS_040 igs rps4|trnT-UGU rps4-trnT-UGU 45800 46143 0 344 LSC 0.003322 2 0 300 250 no 0.000000 2 0.000000 0.003322 1.000000 36.900000 trnT-UGU tRNA trnT-UGU trnT-UGU 46144 46216 -1 73 LSC 0.000000 0 0 21 177 no 0.000000 1 0.000000 0.000000 1.000000 20.300000 IGS_041 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 46217 46797 0 581 LSC 0.006229 8 18 94 156 no 0.714286 6 0.833333 0.006382 0.991394 52.900000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 46798 46832 1 35 LSC 0.000000 0 0 78 121 no 0.000000 1 0.000000 0.000000 1.000000 24.600000 IGS_042 igs trnL-UAA|trnL-UAA trnL-UAA-trnL-UAA 46833 47274 0 442 LSC 0.003017 4 0 113 136 no 0.285714 4 0.500000 0.003017 1.000000 38.000000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 47275 47324 1 50 LSC 0.000000 0 0 113 86 no 0.000000 1 0.000000 0.000000 1.000000 25.200000 IGS_043 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 47325 47680 0 356 LSC 0.020332 14 31 163 249 yes 0.714286 6 0.833333 0.022182 1.000000 64.700000 trnF-GAA tRNA trnF-GAA trnF-GAA 47681 47750 1 70 LSC 0.000000 0 0 13 179 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_044 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 47751 48381 0 631 LSC 0.005434 9 0 83 300 yes 0.714286 6 0.833333 0.005434 1.000000 48.800000 ndhJ gene ndhJ ndhJ 48382 48858 -1 477 LSC 0.001198 1 0 4 9 no 0.000000 2 0.000000 0.001198 1.000000 23.500000 IGS_045 igs ndhJ|ndhK ndhJ-ndhK 48859 48961 0 103 LSC 0.005548 2 0 152 300 no 0.285714 3 0.666667 0.005548 1.000000 40.400000 ndhK gene ndhK ndhK 48962 49639 -1 678 LSC 0.001545 3 0 86 300 no 0.285714 4 0.500000 0.001545 1.000000 38.100000 IGS_046 igs ndhK|ndhC ndhK-ndhC 49640 49690 0 51 LSC 0.000000 0 0 17 300 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 ndhC gene ndhC ndhC 49691 50053 -1 363 LSC 0.000000 0 0 68 16 no 0.000000 1 0.000000 0.000000 1.000000 21.300000 IGS_047 igs ndhC|trnV-UAC ndhC-trnV-UAC 50054 51265 0 1212 LSC 0.006915 22 33 300 275 yes 0.714286 6 0.833333 0.007089 0.995875 61.700000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 51266 51303 -1 38 LSC 0.000000 0 0 75 237 no 0.000000 1 0.000000 0.000000 1.000000 24.400000 IGS_048 igs trnV-UAC|trnV-UAC trnV-UAC-trnV-UAC 51304 51874 0 571 LSC 0.001334 2 0 113 46 no 0.142857 3 0.333333 0.001334 1.000000 31.600000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 51875 51912 -1 38 LSC 0.000000 0 0 58 8 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 IGS_049 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 51913 52105 0 193 LSC 0.012337 5 0 96 96 no 0.142857 4 0.250000 0.012337 1.000000 37.400000 trnM-CAU tRNA trnM-CAU trnM-CAU 52106 52178 1 73 LSC 0.000000 0 0 31 23 no 0.000000 1 0.000000 0.000000 1.000000 20.500000 IGS_050 igs trnM-CAU|atpE trnM-CAU-atpE 52179 52390 0 212 LSC 0.006739 3 11 104 300 no 0.428571 4 0.750000 0.006849 1.000000 45.400000 atpE gene atpE atpE 52391 52792 -1 402 LSC 0.000000 0 0 132 144 no 0.000000 1 0.000000 0.000000 1.000000 30.800000 atpB gene atpB atpB 52789 54285 -1 1497 LSC 0.001145 4 0 300 78 no 0.285714 4 0.500000 0.001145 1.000000 37.100000 IGS_052 igs atpB|rbcL atpB-rbcL 54286 55067 0 782 LSC 0.002192 4 16 47 300 no 0.428571 4 0.750000 0.002238 1.000000 40.500000 rbcL gene rbcL rbcL 55068 56495 1 1428 LSC 0.003535 11 0 250 300 yes 0.714286 6 0.833333 0.003535 1.000000 55.900000 IGS_053 igs rbcL|psaI rbcL-psaI 56496 59259 0 2764 LSC 0.003956 28 243 14 12 yes 0.714286 6 0.833333 0.003647 0.997467 45.400000 psaI gene psaI psaI 59260 59370 1 111 LSC 0.002574 1 0 300 11 no 0.142857 2 0.500000 0.002574 1.000000 24.500000 IGS_054 igs psaI|ycf4 psaI-ycf4 59371 59779 0 409 LSC 0.005356 6 1 98 44 no 0.714286 6 0.833333 0.005363 1.000000 42.200000 ycf4 gene ycf4 ycf4 59780 60334 1 555 LSC 0.002059 4 0 8 55 no 0.428571 4 0.750000 0.002059 1.000000 34.500000 IGS_055 igs ycf4|cemA ycf4-cemA 60335 61124 0 790 LSC 0.005666 11 0 300 300 yes 0.714286 6 0.833333 0.005666 1.000000 57.700000 cemA gene cemA cemA 61125 61814 1 690 LSC 0.000828 1 0 56 146 no 0.000000 2 0.000000 0.000828 1.000000 29.800000 IGS_056 igs cemA|petA cemA-petA 61815 62045 0 231 LSC 0.003298 2 0 300 84 no 0.142857 3 0.333333 0.003298 1.000000 30.300000 petA gene petA petA 62046 63008 1 963 LSC 0.001483 4 0 41 41 no 0.428571 5 0.600000 0.001483 1.000000 37.300000 IGS_057 igs petA|psbJ petA-psbJ 63009 63790 0 782 LSC 0.006333 12 1 30 300 no 0.428571 5 0.600000 0.006336 1.000000 40.200000 psbJ gene psbJ psbJ 63791 63913 -1 123 LSC 0.000000 0 0 60 300 no 0.000000 1 0.000000 0.000000 1.000000 23.200000 IGS_058 igs psbJ|psbL psbJ-psbL 63914 64061 0 148 LSC 0.000000 0 3 183 253 no 0.142857 2 0.500000 0.000000 1.000000 37.600000 psbL gene psbL psbL 64062 64178 -1 117 LSC 0.000000 0 0 300 136 no 0.000000 1 0.000000 0.000000 1.000000 28.900000 IGS_059 igs psbL|psbF psbL-psbF 64179 64200 0 22 LSC 0.000000 0 0 300 114 no 0.000000 1 0.000000 0.000000 1.000000 27.300000 psbF gene psbF psbF 64201 64320 -1 120 LSC 0.003968 1 0 300 273 no 0.000000 2 0.000000 0.003968 1.000000 36.600000 IGS_060 igs psbF|psbE psbF-psbE 64321 64329 0 9 LSC 0.000000 0 0 5 264 no 0.000000 1 0.000000 NA 1.000000 19.100000 psbE gene psbE psbE 64330 64581 -1 252 LSC 0.000000 0 0 14 12 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_061 igs psbE|petL psbE-petL 64582 65845 0 1264 LSC 0.006329 22 1 266 96 no 0.714286 6 0.833333 0.006331 1.000000 50.700000 petL gene petL petL 65846 65941 1 96 LSC 0.000000 0 0 0 0 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_062 igs petL|petG petL-petG 65942 66106 0 165 LSC 0.009235 3 0 96 26 no 0.428571 5 0.600000 0.009235 1.000000 35.200000 petG gene petG petG 66107 66220 1 114 LSC 0.006683 2 0 124 98 no 0.142857 3 0.333333 0.006683 1.000000 34.000000 IGS_063 igs petG|trnW-CCA petG-trnW-CCA 66221 66337 0 117 LSC 0.002442 1 0 6 115 no 0.142857 2 0.500000 0.002442 1.000000 24.000000 trnW-CCA tRNA trnW-CCA trnW-CCA 66338 66411 -1 74 LSC 0.000000 0 0 18 41 no 0.000000 1 0.000000 0.000000 1.000000 20.100000 IGS_064 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 66412 66591 0 180 LSC 0.001587 1 0 92 126 no 0.142857 2 0.500000 0.001587 1.000000 29.700000 trnP-UGG tRNA trnP-UGG trnP-UGG 66592 66665 -1 74 LSC 0.000000 0 0 138 52 no 0.000000 1 0.000000 0.000000 1.000000 22.700000 IGS_065 igs trnP-UGG|psaJ trnP-UGG-psaJ 66666 66974 0 309 LSC 0.004931 4 0 212 300 no 0.428571 5 0.600000 0.004931 1.000000 45.800000 psaJ gene psaJ psaJ 66975 67109 1 135 LSC 0.000000 0 0 7 180 no 0.000000 1 0.000000 0.000000 1.000000 19.300000 IGS_066 igs psaJ|rpl33 psaJ-rpl33 67110 67544 0 435 LSC 0.002189 2 25 142 300 no 0.285714 4 0.500000 0.002215 1.000000 45.100000 rpl33 gene rpl33 rpl33 67545 67751 1 207 LSC 0.000000 0 0 157 300 no 0.000000 1 0.000000 0.000000 1.000000 30.500000 IGS_067 igs rpl33|rps18 rpl33-rps18 67752 67939 0 188 LSC 0.000000 0 7 300 300 no 0.000000 3 0.000000 0.000000 0.968085 37.200000 rps18 gene rps18 rps18 67940 68281 1 342 LSC 0.002506 2 0 300 155 no 0.142857 3 0.333333 0.002506 1.000000 35.800000 IGS_068 igs rps18|rpl20 rps18-rpl20 68282 68439 0 158 LSC 0.003617 1 0 16 226 no 0.000000 2 0.000000 0.003617 1.000000 22.400000 rpl20 gene rpl20 rpl20 68440 68820 -1 381 LSC 0.001500 1 0 2 236 no 0.000000 2 0.000000 0.001500 1.000000 21.600000 IGS_069 igs rpl20|rps12 rpl20-rps12 68821 69560 0 740 LSC 0.002445 5 0 154 215 no 0.285714 4 0.500000 0.002445 1.000000 43.900000 rps12_part1 gene rps12 rps12 69561 69674 -1 114 LSC 0.000000 0 0 103 101 no 0.000000 1 0.000000 0.000000 1.000000 26.300000 IGS_070 igs rps12|clpP rps12-clpP 69675 69835 0 161 LSC 0.002958 1 0 217 204 no 0.000000 2 0.000000 0.002958 1.000000 35.900000 clpP_part3 gene clpP clpP 69836 70061 -1 226 LSC 0.001264 1 0 59 203 no 0.142857 2 0.500000 0.001264 1.000000 27.000000 IGS_071 igs clpP|clpP clpP-clpP 70062 70684 0 623 LSC 0.001834 2 1 21 300 no 0.000000 2 0.000000 0.001837 1.000000 28.000000 clpP_part2 gene clpP clpP 70685 70978 -1 294 LSC 0.000000 0 0 300 14 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 IGS_072 igs clpP|clpP clpP-clpP 70979 71787 0 809 LSC 0.005298 12 1 300 139 no 0.714286 6 0.833333 0.005299 1.000000 53.200000 clpP_part1 gene clpP clpP 71788 71858 -1 71 LSC 0.000000 0 0 51 68 no 0.000000 1 0.000000 0.000000 1.000000 22.600000 IGS_073 igs clpP|psbB clpP-psbB 71859 72301 0 443 LSC 0.004300 5 0 122 300 no 0.428571 5 0.600000 0.004300 1.000000 42.300000 psbB gene psbB psbB 72302 73828 1 1527 LSC 0.000873 3 0 37 44 no 0.142857 4 0.250000 0.000873 1.000000 31.000000 IGS_074 igs psbB|psbT psbB-psbT 73829 74017 0 189 LSC 0.004031 2 0 300 300 no 0.142857 3 0.333333 0.004031 1.000000 39.600000 psbT gene psbT psbT 74018 74119 1 102 LSC 0.000000 0 0 76 300 no 0.000000 1 0.000000 0.000000 1.000000 24.400000 IGS_075 igs psbT|psbN psbT-psbN 74120 74193 0 74 LSC 0.000000 0 0 178 300 no 0.000000 1 0.000000 0.000000 1.000000 32.100000 psbN gene psbN psbN 74194 74325 -1 132 LSC 0.000000 0 0 252 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_076 igs psbN|psbH psbN-psbH 74326 74427 0 102 LSC 0.000000 0 0 300 247 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psbH gene psbH psbH 74428 74649 1 222 LSC 0.000000 0 0 300 25 no 0.000000 1 0.000000 0.000000 1.000000 20.600000 IGS_077 igs psbH|petB psbH-petB 74650 74773 0 124 LSC 0.002304 1 0 300 197 no 0.142857 2 0.500000 0.002304 1.000000 38.200000 petB_part1 gene petB petB 74774 74779 1 6 LSC 0.000000 0 0 98 191 no 0.000000 1 0.000000 NA 1.000000 26.100000 IGS_078 igs petB|petB petB-petB 74780 75561 0 782 LSC 0.001827 4 19 104 300 no 0.428571 5 0.600000 0.001872 0.975703 44.500000 petB_part2 gene petB petB 75562 76203 1 642 LSC 0.000445 1 0 300 145 no 0.142857 2 0.500000 0.000445 1.000000 38.900000 IGS_079 igs petB|petD petB-petD 76204 76392 0 189 LSC 0.005543 2 0 75 73 no 0.000000 3 0.000000 0.005543 1.000000 28.000000 petD_part1 gene petD petD 76393 76400 1 8 LSC 0.000000 0 0 38 65 no 0.000000 1 0.000000 NA 1.000000 21.600000 IGS_080 igs petD|petD petD-petD 76401 77099 0 699 LSC 0.004632 9 0 46 84 no 0.714286 6 0.833333 0.004632 1.000000 45.500000 petD_part2 gene petD petD 77100 77574 1 475 LSC 0.001805 2 0 96 23 no 0.142857 3 0.333333 0.001805 1.000000 28.100000 IGS_081 igs petD|rpoA petD-rpoA 77575 77677 0 103 LSC 0.002774 1 0 147 43 no 0.142857 2 0.500000 0.002774 1.000000 27.100000 rpoA_part2 gene rpoA rpoA 77678 77738 -1 61 LSC 0.004684 1 0 79 1 no 0.142857 2 0.500000 0.004684 1.000000 25.700000 IGS_082 igs rpoA|rpoA rpoA-rpoA 77739 77784 0 46 LSC 0.006211 1 0 17 300 no 0.142857 2 0.500000 0.006211 1.000000 28.200000 rpoA_part1 gene rpoA rpoA 77785 78776 -1 992 LSC 0.001152 3 0 44 25 no 0.285714 4 0.500000 0.001152 1.000000 33.100000 IGS_083 igs rpoA|rps11 rpoA-rps11 78777 78870 0 94 LSC 0.008105 2 23 287 213 no 0.428571 5 0.600000 0.008532 1.000000 53.300000 rps11 gene rps11 rps11 78871 79281 -1 411 LSC 0.001159 1 0 30 85 no 0.000000 2 0.000000 0.001159 1.000000 24.100000 IGS_084 igs rps11|rpl36 rps11-rpl36 79282 79385 0 104 LSC 0.002747 1 0 197 202 no 0.142857 2 0.500000 0.002747 1.000000 38.600000 rpl36 gene rpl36 rpl36 79386 79499 -1 114 LSC 0.000000 0 0 18 88 no 0.000000 1 0.000000 0.000000 1.000000 20.100000 IGS_085 igs rpl36|infA rpl36-infA 79500 79621 0 122 LSC 0.004684 2 0 132 87 no 0.142857 2 0.500000 0.004684 1.000000 32.100000 infA gene infA infA 79622 79855 -1 234 LSC 0.003663 3 0 23 112 no 0.428571 4 0.750000 0.003663 1.000000 31.800000 IGS_086 igs infA|rps8 infA-rps8 79856 79976 0 121 LSC 0.003935 1 0 56 104 no 0.000000 2 0.000000 0.003935 1.000000 25.800000 rps8 gene rps8 rps8 79977 80381 -1 405 LSC 0.000705 1 0 8 17 no 0.142857 2 0.500000 0.000705 1.000000 24.800000 IGS_087 igs rps8|rpl14 rps8-rpl14 80382 80573 0 192 LSC 0.007440 4 0 300 300 no 0.428571 4 0.750000 0.007440 1.000000 47.700000 rpl14 gene rpl14 rpl14 80574 80942 -1 369 LSC 0.000000 0 0 23 28 no 0.000000 1 0.000000 0.000000 1.000000 21.900000 IGS_088 igs rpl14|rpl16 rpl14-rpl16 80943 81059 0 117 LSC 0.006512 2 2 300 7 no 0.428571 5 0.600000 0.006572 0.991453 34.200000 rpl16_part2 gene rpl16 rpl16 81060 81458 -1 399 LSC 0.003819 4 0 11 119 no 0.285714 4 0.500000 0.003819 1.000000 30.000000 IGS_089 igs rpl16|rpl16 rpl16-rpl16 81459 82516 0 1058 LSC 0.003871 10 4 66 33 no 0.428571 5 0.600000 0.003883 1.000000 38.900000 rpl16_part1 gene rpl16 rpl16 82517 82525 -1 9 LSC 0.000000 0 0 66 24 no 0.000000 1 0.000000 NA 1.000000 20.600000 IGS_090 igs rpl16|rps3 rpl16-rps3 82526 82676 0 151 LSC 0.005676 2 0 75 5 no 0.142857 3 0.333333 0.005676 1.000000 26.000000 rps3 gene rps3 rps3 82677 83333 -1 657 LSC 0.002319 4 0 99 252 no 0.285714 4 0.500000 0.002319 1.000000 39.600000 rpl22 gene rpl22 rpl22 83318 83791 -1 474 LSC 0.000603 1 0 43 5 no 0.142857 2 0.500000 0.000603 1.000000 26.000000 IGS_092 igs rpl22|rps19 rpl22-rps19 83792 83864 0 73 LSC 0.003914 1 0 205 300 no 0.142857 2 0.500000 0.003914 1.000000 39.900000 rps19 gene rps19 rps19 83865 84143 -1 279 LSC 0.000000 0 0 67 156 no 0.000000 1 0.000000 0.000000 1.000000 23.800000 IGS_093 igs rps19|rpl2 rps19-rpl2 84144 84201 0 58 IRb 0.000000 0 0 300 98 no 0.000000 1 0.000000 0.000000 1.000000 26.100000 rpl2_part2 gene rpl2 rpl2 84202 84635 -1 434 IRb 0.002633 3 0 300 300 no 0.142857 3 0.333333 0.002633 1.000000 41.300000 IGS_094 igs rpl2|rpl2 rpl2-rpl2 84636 85300 0 665 IRb 0.000430 1 0 300 300 no 0.142857 2 0.500000 0.000430 1.000000 43.100000 rpl2_part1 gene rpl2 rpl2 85301 85691 -1 391 IRb 0.000000 0 0 270 300 no 0.000000 1 0.000000 0.000000 1.000000 35.600000 IGS_095 igs rpl2|rpl23 rpl2-rpl23 85692 85709 0 18 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 85710 85991 -1 282 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_096 igs rpl23|trnI-CAU rpl23-trnI-CAU 85992 86156 0 165 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-CAU tRNA trnI-CAU trnI-CAU 86157 86230 -1 74 IRb 0.000000 0 0 300 242 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_097 igs trnI-CAU|ycf2 trnI-CAU-ycf2 86231 86341 0 111 IRb 0.000000 0 0 300 131 no 0.000000 1 0.000000 0.000000 1.000000 28.600000 ycf2_part1 gene ycf2 ycf2 86342 86903 1 562 IRb 0.000508 1 0 300 300 no 0.142857 2 0.500000 0.000508 1.000000 42.300000 IGS_098 igs ycf2|ycf2 ycf2-ycf2 86904 87506 0 603 IRb 0.000000 0 0 300 252 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 ycf2_part2 gene ycf2 ycf2 87507 93181 1 5675 IRb 0.000705 11 0 300 184 no 0.571429 5 0.800000 0.000705 1.000000 43.800000 IGS_099 igs ycf2|trnL-CAA ycf2-trnL-CAA 93182 93589 0 408 IRb 0.000700 1 0 300 178 no 0.142857 2 0.500000 0.000700 1.000000 37.700000 trnL-CAA tRNA trnL-CAA trnL-CAA 93590 93670 -1 81 IRb 0.000000 0 0 223 97 no 0.000000 1 0.000000 0.000000 1.000000 26.000000 IGS_100 igs trnL-CAA|ndhB trnL-CAA-ndhB 93671 94241 0 571 IRb 0.001001 2 0 300 300 no 0.285714 3 0.666667 0.001001 1.000000 45.600000 ndhB_part2 gene ndhB ndhB 94242 94997 -1 756 IRb 0.000630 1 0 11 300 no 0.000000 2 0.000000 0.000630 1.000000 26.300000 IGS_101 igs ndhB|ndhB ndhB-ndhB 94998 95666 0 669 IRb 0.001281 2 1 300 300 no 0.285714 4 0.500000 0.001283 1.000000 46.500000 ndhB_part1 gene ndhB ndhB 95667 96443 -1 777 IRb 0.000000 0 0 282 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_102 igs ndhB|rps7 ndhB-rps7 96444 96732 0 289 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps7 gene rps7 rps7 96733 97200 -1 468 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 37.300000 IGS_103 igs rps7|rps12 rps7-rps12 97201 97253 0 53 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps12_part3 gene rps12 rps12 97254 98046 -1 793 IRb 0.000721 1 0 300 300 no 0.000000 2 0.000000 0.000721 1.000000 40.500000 IGS_104 igs rps12|ycf15 rps12-ycf15 98047 98787 0 741 IRb 0.000000 0 0 300 204 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 ycf15 gene ycf15 ycf15 98788 98979 -1 192 IRb 0.000000 0 0 300 12 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_105 igs ycf15|trnV-GAC ycf15-trnV-GAC 98980 99411 0 432 IRb 0.001323 2 0 300 300 no 0.285714 3 0.666667 0.001323 1.000000 43.000000 trnV-GAC tRNA trnV-GAC trnV-GAC 99412 99483 1 72 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_106 igs trnV-GAC|rrn16S trnV-GAC-rrn16S 99484 99710 0 227 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn16S rRNA rrn16S rrn16S 99711 101201 1 1491 IRb 0.000383 1 0 300 91 no 0.000000 2 0.000000 0.000383 1.000000 32.100000 IGS_107 igs rrn16S|trnI-GAU rrn16S-trnI-GAU 101202 101494 0 293 IRb 0.001625 1 0 300 300 no 0.000000 2 0.000000 0.001625 1.000000 34.900000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 101495 101537 1 43 IRb 0.000000 0 0 201 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_108 igs trnI-GAU|trnI-GAU trnI-GAU-trnI-GAU 101538 102307 0 770 IRb 0.000000 0 1 244 300 no 0.142857 2 0.500000 0.000000 1.000000 42.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 102308 102342 1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_109 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 102343 102406 0 64 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 102407 102443 1 37 IRb 0.000000 0 0 300 264 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_110 igs trnA-UGC|trnA-UGC trnA-UGC-trnA-UGC 102444 103257 0 814 IRb 0.000702 2 0 300 300 no 0.285714 3 0.666667 0.000702 1.000000 46.000000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 103258 103293 1 36 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_111 igs trnA-UGC|rrn23S trnA-UGC-rrn23S 103294 103445 0 152 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn23S rRNA rrn23S rrn23S 103446 106255 1 2810 IRb 0.000712 4 0 300 300 no 0.142857 3 0.333333 0.000712 1.000000 40.400000 IGS_112 igs rrn23S|rrn4.5S rrn23S-rrn4.5S 106256 106353 0 98 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn4.5S rRNA rrn4.5S rrn4.5S 106354 106456 1 103 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_113 igs rrn4.5S|rrn5S rrn4.5S-rrn5S 106457 106700 0 244 IRb 0.000000 0 6 300 176 no 0.142857 2 0.500000 0.000000 1.000000 37.600000 rrn5S rRNA rrn5S rrn5S 106701 106821 1 121 IRb 0.000000 0 0 300 55 no 0.000000 1 0.000000 0.000000 1.000000 22.900000 IGS_114 igs rrn5S|trnR-ACG rrn5S-trnR-ACG 106822 107074 0 253 IRb 0.001882 1 0 300 205 no 0.000000 2 0.000000 0.001882 1.000000 35.100000 trnR-ACG tRNA trnR-ACG trnR-ACG 107075 107148 1 74 IRb 0.000000 0 0 197 131 no 0.000000 1 0.000000 0.000000 1.000000 28.600000 IGS_115 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 107149 107614 0 466 IRb 0.003474 3 0 271 220 no 0.000000 3 0.000000 0.003474 1.000000 39.600000 trnN-GUU tRNA trnN-GUU trnN-GUU 107615 107686 -1 72 IRb 0.000000 0 0 88 148 no 0.000000 1 0.000000 0.000000 1.000000 25.400000 IGS_116 igs trnN-GUU|ycf1 trnN-GUU-ycf1 107687 108009 0 323 IRb 0.002654 2 0 160 170 no 0.142857 3 0.333333 0.002654 1.000000 35.900000 ycf1 gene ycf1 ycf1 108010 108486 1 477 IRb 0.005391 5 14 135 2 no 0.428571 5 0.600000 0.005485 0.989518 37.600000 ndhF gene ndhF ndhF 108472 110691 -1 2220 SSC 0.005491 29 15 291 7 yes 0.714286 6 0.833333 0.004661 0.996847 42.200000 IGS_118 igs ndhF|rpl32 ndhF-rpl32 110692 111767 0 1076 SSC 0.009648 28 4 92 179 yes 0.714286 6 0.833333 0.009677 1.000000 53.300000 rpl32 gene rpl32 rpl32 111768 111932 1 165 SSC 0.000000 0 0 68 14 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 IGS_119 igs rpl32|trnL-UAG rpl32-trnL-UAG 111933 112811 0 879 SSC 0.007584 14 14 233 96 yes 0.714286 6 0.833333 0.007707 0.984073 52.400000 trnL-UAG tRNA trnL-UAG trnL-UAG 112812 112891 1 80 SSC 0.000000 0 0 114 16 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 IGS_120 igs trnL-UAG|ccsA trnL-UAG-ccsA 112892 113005 0 114 SSC 0.005013 1 33 194 77 no 0.142857 3 0.333333 0.005523 1.000000 35.500000 ccsA gene ccsA ccsA 113006 113980 1 975 SSC 0.001758 6 6 97 20 yes 0.428571 5 0.600000 0.001769 0.993846 36.700000 IGS_121 igs ccsA|ndhD ccsA-ndhD 113981 114254 0 274 SSC 0.024678 15 22 90 300 yes 0.714286 6 0.833333 0.024438 0.930657 60.600000 ndhD gene ndhD ndhD 114255 115754 -1 1500 SSC 0.002032 8 0 9 300 no 0.428571 5 0.600000 0.002032 1.000000 35.300000 IGS_122 igs ndhD|psaC ndhD-psaC 115755 115872 0 118 SSC 0.000000 0 0 93 248 no 0.000000 1 0.000000 0.000000 1.000000 25.700000 psaC gene psaC psaC 115873 116118 -1 246 SSC 0.000000 0 0 211 2 no 0.000000 1 0.000000 0.000000 1.000000 18.900000 IGS_123 igs psaC|ndhE psaC-ndhE 116119 116354 0 236 SSC 0.002421 2 0 300 300 no 0.285714 3 0.666667 0.002421 1.000000 41.300000 ndhE gene ndhE ndhE 116355 116660 -1 306 SSC 0.000000 0 0 225 67 no 0.000000 1 0.000000 0.000000 1.000000 23.900000 IGS_124 igs ndhE|ndhG ndhE-ndhG 116661 116878 0 218 SSC 0.003932 3 0 300 146 no 0.285714 3 0.666667 0.003932 1.000000 38.500000 ndhG gene ndhG ndhG 116879 117409 -1 531 SSC 0.001614 2 0 51 130 no 0.142857 3 0.333333 0.001614 1.000000 31.300000 IGS_125 igs ndhG|ndhI ndhG-ndhI 117410 117754 0 345 SSC 0.009248 8 14 122 141 no 0.714286 6 0.833333 0.009069 1.000000 54.200000 ndhI gene ndhI ndhI 117755 118255 -1 501 SSC 0.002851 3 0 27 57 no 0.142857 3 0.333333 0.002851 1.000000 29.700000 IGS_126 igs ndhI|ndhA ndhI-ndhA 118256 118328 0 73 SSC 0.007828 2 0 53 177 no 0.285714 3 0.666667 0.007828 1.000000 35.000000 ndhA_part2 gene ndhA ndhA 118329 118867 -1 539 SSC 0.002120 2 0 5 32 no 0.142857 4 0.250000 0.002120 1.000000 28.200000 IGS_127 igs ndhA|ndhA ndhA-ndhA 118868 119921 0 1054 SSC 0.004970 13 2 294 250 yes 0.714286 6 0.833333 0.004973 1.000000 57.400000 ndhA_part1 gene ndhA ndhA 119922 120474 -1 553 SSC 0.001033 1 0 51 300 no 0.000000 2 0.000000 0.001033 1.000000 28.500000 IGS_128 igs ndhA|ndhH ndhA-ndhH 120475 120475 0 1 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ndhH gene ndhH ndhH 120476 121657 -1 1182 SSC 0.001853 6 0 300 68 no 0.714286 6 0.833333 0.001853 1.000000 45.000000 IGS_129 igs ndhH|rps15 ndhH-rps15 121658 121747 0 90 SSC 0.003175 1 0 16 60 no 0.142857 2 0.500000 0.003175 1.000000 25.400000 rps15 gene rps15 rps15 121748 122026 -1 279 SSC 0.002048 1 0 21 44 no 0.000000 2 0.000000 0.002048 1.000000 21.700000 IGS_130 igs rps15|ycf1 rps15-ycf1 122027 122439 0 413 SSC 0.006365 6 20 218 132 yes 0.714286 6 0.833333 0.006104 1.000000 54.800000 ycf1 gene ycf1 ycf1 122440 127494 -1 5055 SSC 0.005935 75 15 43 135 yes 0.714286 6 0.833333 0.005944 1.000000 40.200000 IGS_131 igs ycf1|trnN-GUU ycf1-trnN-GUU 127495 127817 0 323 IRa 0.002654 2 0 170 160 no 0.142857 3 0.333333 0.002654 1.000000 35.900000 trnN-GUU tRNA trnN-GUU trnN-GUU 127818 127889 1 72 IRa 0.000000 0 0 148 88 no 0.000000 1 0.000000 0.000000 1.000000 25.400000 IGS_132 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 127890 128355 0 466 IRa 0.003474 3 0 220 271 no 0.000000 3 0.000000 0.003474 1.000000 39.600000 trnR-ACG tRNA trnR-ACG trnR-ACG 128356 128429 -1 74 IRa 0.000000 0 0 131 197 no 0.000000 1 0.000000 0.000000 1.000000 28.600000 IGS_133 igs trnR-ACG|rrn5S trnR-ACG-rrn5S 128430 128682 0 253 IRa 0.001882 1 0 205 300 no 0.000000 2 0.000000 0.001882 1.000000 35.100000 rrn5S rRNA rrn5S rrn5S 128683 128803 -1 121 IRa 0.000000 0 0 55 300 no 0.000000 1 0.000000 0.000000 1.000000 22.900000 IGS_134 igs rrn5S|rrn4.5S rrn5S-rrn4.5S 128804 129047 0 244 IRa 0.000000 0 6 176 300 no 0.142857 2 0.500000 0.000000 1.000000 37.600000 rrn4.5S rRNA rrn4.5S rrn4.5S 129048 129150 -1 103 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_135 igs rrn4.5S|rrn23S rrn4.5S-rrn23S 129151 129248 0 98 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn23S rRNA rrn23S rrn23S 129249 132058 -1 2810 IRa 0.000712 4 0 300 300 no 0.142857 3 0.333333 0.000712 1.000000 40.400000 IGS_136 igs rrn23S|trnA-UGC rrn23S-trnA-UGC 132059 132210 0 152 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 132211 132246 -1 36 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_137 igs trnA-UGC|trnA-UGC trnA-UGC-trnA-UGC 132247 133060 0 814 IRa 0.000702 2 0 300 300 no 0.285714 3 0.666667 0.000702 1.000000 46.000000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 133061 133097 -1 37 IRa 0.000000 0 0 264 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_138 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 133098 133161 0 64 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 133162 133196 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_139 igs trnI-GAU|trnI-GAU trnI-GAU-trnI-GAU 133197 133966 0 770 IRa 0.000000 0 1 300 244 no 0.142857 2 0.500000 0.000000 1.000000 42.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 133967 134009 -1 43 IRa 0.000000 0 0 300 201 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_140 igs trnI-GAU|rrn16S trnI-GAU-rrn16S 134010 134302 0 293 IRa 0.001625 1 0 300 300 no 0.000000 2 0.000000 0.001625 1.000000 34.900000 rrn16S rRNA rrn16S rrn16S 134303 135793 -1 1491 IRa 0.000383 1 0 91 300 no 0.000000 2 0.000000 0.000383 1.000000 32.100000 IGS_141 igs rrn16S|trnV-GAC rrn16S-trnV-GAC 135794 136020 0 227 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnV-GAC tRNA trnV-GAC trnV-GAC 136021 136092 -1 72 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_142 igs trnV-GAC|ycf15 trnV-GAC-ycf15 136093 136524 0 432 IRa 0.001323 2 0 300 300 no 0.285714 3 0.666667 0.001323 1.000000 43.000000 ycf15 gene ycf15 ycf15 136525 136716 1 192 IRa 0.000000 0 0 12 300 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_143 igs ycf15|rps12 ycf15-rps12 136717 137457 0 741 IRa 0.000000 0 0 204 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 rps12_part2 gene rps12 rps12 137458 138250 1 793 IRa 0.000721 1 0 300 300 no 0.000000 2 0.000000 0.000721 1.000000 40.500000 IGS_144 igs rps12|rps7 rps12-rps7 138251 138303 0 53 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps7 gene rps7 rps7 138304 138771 1 468 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 37.300000 IGS_145 igs rps7|ndhB rps7-ndhB 138772 139060 0 289 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_146 igs ndhB|trnL-CAA ndhB-trnL-CAA 141263 141833 0 571 IRa 0.001001 2 0 300 300 no 0.285714 3 0.666667 0.001001 1.000000 45.600000 trnL-CAA tRNA trnL-CAA trnL-CAA 141834 141914 1 81 IRa 0.000000 0 0 97 223 no 0.000000 1 0.000000 0.000000 1.000000 26.000000 IGS_147 igs trnL-CAA|ycf2 trnL-CAA-ycf2 141915 142322 0 408 IRa 0.000700 1 0 178 300 no 0.142857 2 0.500000 0.000700 1.000000 37.700000 IGS_148 igs ycf2|trnI-CAU ycf2-trnI-CAU 149163 149273 0 111 IRa 0.000000 0 0 131 300 no 0.000000 1 0.000000 0.000000 1.000000 28.600000 trnI-CAU tRNA trnI-CAU trnI-CAU 149274 149347 1 74 IRa 0.000000 0 0 242 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_149 igs trnI-CAU|rpl23 trnI-CAU-rpl23 149348 149512 0 165 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl23 gene rpl23 rpl23 149513 149794 1 282 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_150 igs rpl23|rpl2 rpl23-rpl2 149795 149812 0 18 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_151 igs rpl2|trnH-GUG rpl2-trnH-GUG 151303 10 0 159 IRa 0.000000 0 29 98 125 no 0.142857 3 0.333333 0.000000 1.000000 32.600000