primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score tatC_p1 tatC 1 TAAACTTGACCACGACCACG ACCACAAAGTACAGAAACTGCT 20 22 50.0 40.9 58.1 58.1 0.0 0.0 2.258364 13578 14324 1680-1680 0.333333 35.3 tatC_p2 tatC 2 TAAACTTGACCACGACCACG CCACAAAGTACAGAAACTGCTG 20 22 50.0 45.5 58.1 57.8 0.0 0.0 2.359467 13578 14324 1679-1679 0.333333 34.5 tatC_p3 tatC 3 TAAACTTGACCACGACCACG ACCACAAAGTACAGAAACTGC 20 21 50.0 42.9 58.1 56.7 0.0 0.0 2.475192 13578 14324 1680-1680 0.333333 33.5 tatC_p4 tatC 4 AACAGATGTTGGGGCTTCAA ACCACAAAGTACAGAAACTGCT 20 22 45.0 40.9 57.6 58.1 0.0 0.0 2.493941 13578 14324 1318-1318 0.333333 33.4 tatC_p5 tatC 5 ACAGATGTTGGGGCTTCAAA ACCACAAAGTACAGAAACTGCT 20 22 45.0 40.9 57.6 58.1 0.0 0.0 2.493941 13578 14324 1317-1317 0.333333 33.4 trnH(GUG)-rpl19_p1 trnH(GUG)-rpl19 1 GCACTTGGAATTGTTGGAGC AACCCAGTCGGATGCATTTT 20 20 50.0 45.0 57.9 58.1 0.0 0.0 0.146906 19034 20348 2224-2224 0.333333 52.2 trnH(GUG)-rpl19_p2 trnH(GUG)-rpl19 2 GCACTTGGAATTGTTGGAGC ACCCAGTCGGATGCATTTTT 20 20 50.0 45.0 57.9 58.1 0.0 0.0 0.146906 19034 20348 2223-2223 0.333333 52.2 trnH(GUG)-rpl19_p3 trnH(GUG)-rpl19 3 TGGCACTTGGAATTGTTGGA AACCCAGTCGGATGCATTTT 20 20 45.0 45.0 57.9 58.1 0.0 0.0 0.155814 19034 20348 2226-2226 0.333333 52.1 trnH(GUG)-rpl19_p4 trnH(GUG)-rpl19 4 TGGCACTTGGAATTGTTGGA ACCCAGTCGGATGCATTTTT 20 20 45.0 45.0 57.9 58.1 0.0 0.0 0.155814 19034 20348 2225-2225 0.333333 52.1 trnH(GUG)-rpl19_p5 trnH(GUG)-rpl19 5 TAAGATTCAGGCGAACGACG ACCCAGTCGGATGCATTTTT 20 20 50.0 45.0 58.1 58.1 0.0 0.0 0.172500 19034 20348 1787-1787 0.333333 52.0 rps2_p1 rps2 1 GACTAATCCCAGCAGGTTCG CGTTTGTTGGAGCAGCAAAT 20 20 55.0 45.0 58.1 57.9 0.0 0.0 0.197271 33720 34472 1415-1415 0.333333 51.8 rps2_p2 rps2 2 GACTAATCCCAGCAGGTTCG GGAATTAAAGCTCCTGCCCA 20 20 55.0 50.0 58.1 57.9 0.0 0.0 0.202551 33720 34472 1365-1365 0.333333 51.7 rps2_p3 rps2 3 GACTAATCCCAGCAGGTTCG AGCTCCTGCCCAATTACAAC 20 20 55.0 50.0 58.1 58.2 0.0 0.0 0.219251 33720 34472 1357-1357 0.333333 51.6 rps2_p4 rps2 4 GACTAATCCCAGCAGGTTCG GTCCCATTTGAGTGATGGCA 20 20 55.0 50.0 58.1 58.2 0.0 0.0 0.220563 33720 34472 1280-1280 0.333333 51.6 rps2_p5 rps2 5 GACTAATCCCAGCAGGTTCG TATCGTTTGTTGGAGCAGCA 20 20 55.0 45.0 58.1 57.8 0.0 0.0 0.236069 33720 34472 1418-1418 0.333333 51.4 psbW-clpC_p1 psbW-clpC 1 AATTGGGGTGTAGCCAAGTG CGCCAATTGTAAAGCACCAG 20 20 50.0 50.0 58.1 58.0 2.2 4.4 0.095391 45227 45861 1789-1789 0.333333 52.6 psbW-clpC_p2 psbW-clpC 2 TAGGTTCGAATCCTCCCTCC CGCCAATTGTAAAGCACCAG 20 20 55.0 50.0 57.9 58.0 18.6 4.4 0.102375 45227 45861 1738-1738 0.333333 52.5 psbW-clpC_p3 psbW-clpC 3 AATTGGGGTGTAGCCAAGTG GAACCAGCAACAATTCGAGC 20 20 50.0 50.0 58.1 58.0 2.2 0.0 0.107541 45227 45861 1422-1422 0.333333 52.5 psbW-clpC_p4 psbW-clpC 4 TAGGTTCGAATCCTCCCTCC GAACCAGCAACAATTCGAGC 20 20 55.0 50.0 57.9 58.0 18.6 0.0 0.114525 45227 45861 1371-1371 0.333333 52.4 psbW-clpC_p5 psbW-clpC 5 CCCTCCTCGCCCATTTATTC CGCCAATTGTAAAGCACCAG 20 20 55.0 50.0 58.1 58.0 0.0 4.4 0.121186 45227 45861 1844-1844 0.333333 52.4 dnaB_p1 dnaB 1 CCTCTTGAGATTAAGACAGGCC CCTGCGTTCTACCAACTGAA 22 20 50.0 50.0 58.2 57.8 0.0 0.0 2.360951 50414 52186 2183-2183 0.333333 34.4 dnaB_p2 dnaB 2 CCTCTTGAGATTAAGACAGGCC ACCAACTGAACTAAGGACGC 22 20 50.0 50.0 58.2 57.8 0.0 0.0 2.362452 50414 52186 2173-2173 0.333333 34.4 dnaB_p3 dnaB 3 CCTCTTGAGATTAAGACAGGCC AAAAGAACGGATGCAGGAGG 22 20 50.0 50.0 58.2 58.2 0.0 0.0 2.370749 50414 52186 2518-2518 0.333333 34.4 dnaB_p4 dnaB 4 CCTCTTGAGATTAAGACAGGCC ACCCTCGACACCAGATTTTG 22 20 50.0 50.0 58.2 57.8 0.0 0.0 2.382138 50414 52186 2207-2207 0.333333 34.3 dnaB_p5 dnaB 5 CCTCTTGAGATTAAGACAGGCC CAGATTTTGGAGACCTGCGT 22 20 50.0 50.0 58.2 58.2 0.0 0.0 2.383620 50414 52186 2196-2196 0.333333 34.3 acpP-trnP_p1 acpP-trnP 1 GGAACAACTGTACGCGTAGT AAAGCAGACACGCTACCAAA 20 20 50.0 45.0 57.9 58.0 21.3 0.0 0.094301 54539 55740 494-1479 0.666667 77.9 acpP-trnP_p2 acpP-trnP 2 TGTAGGAACAACTGTACGCG AAAGCAGACACGCTACCAAA 20 20 50.0 45.0 57.9 58.0 3.5 0.0 0.092894 54539 55740 1483-1483 0.333333 52.6 acpP-trnP_p3 acpP-trnP 3 GTAGGAACAACTGTACGCGT AAAGCAGACACGCTACCAAA 20 20 50.0 45.0 57.9 58.0 19.2 0.0 0.094301 54539 55740 1482-1482 0.333333 52.6 acpP-trnP_p4 acpP-trnP 4 TGTAGGAACAACTGTACGCG GGGATGACAGGATTCGAACC 20 20 50.0 55.0 57.9 58.0 3.5 0.0 0.099760 54539 55740 1520-1520 0.333333 52.5 acpP-trnP_p5 acpP-trnP 5 GGAACAACTGTACGCGTAGT GGGATGACAGGATTCGAACC 20 20 50.0 55.0 57.9 58.0 21.3 0.0 0.101167 54539 55740 1516-1516 0.333333 52.5 rpl4_p1 rpl4 1 ACGACGTTTATGACCACCAC TCGTGGAGCAATGACTCATG 20 20 50.0 50.0 58.2 58.0 0.0 6.9 0.227323 82666 83310 1394-1394 0.333333 51.5 rpl4_p2 rpl4 2 ACGACGTTTATGACCACCAC GTCGTGGAGCAATGACTCAT 20 20 50.0 50.0 58.2 58.0 0.0 6.9 0.228723 82666 83310 1395-1395 0.333333 51.5 rpl4_p3 rpl4 3 ACGACGTTTATGACCACCAC GTGGAGCAATGACTCATGGT 20 20 50.0 50.0 58.2 57.9 0.0 0.0 0.332789 82666 83310 1392-1392 0.333333 50.7 rpl4_p4 rpl4 4 ACGACGTTTATGACCACCAC GGAACTACTCCAGGACGAGT 20 20 50.0 55.0 58.2 58.2 0.0 0.0 0.376185 82666 83310 1336-1336 0.333333 50.3 rpl4_p5 rpl4 5 GACGTTTATGACCACCACCT TCGTGGAGCAATGACTCATG 20 20 50.0 50.0 57.5 58.0 0.0 6.9 0.481901 82666 83310 1392-1392 0.333333 49.5 psbD-rns_p1 psbD-rns 1 TTCAACCGTTGCTCCATGAA ATTCTCACGCGTTACTCACC 20 20 45.0 50.0 58.0 58.0 6.4 10.2 0.033565 91844 93923 2853-2853 0.333333 53.1 psbD-rns_p2 psbD-rns 2 TTTCAACCGTTGCTCCATGA ATTCTCACGCGTTACTCACC 20 20 45.0 50.0 58.0 58.0 6.4 10.2 0.033565 91844 93923 2854-2854 0.333333 53.1 psbD-rns_p3 psbD-rns 3 AAAGCTAGGGCATTGTACGG ATTCTCACGCGTTACTCACC 20 20 50.0 50.0 58.0 58.0 0.0 10.2 0.046217 91844 93923 2633-2633 0.333333 53.0 psbD-rns_p4 psbD-rns 4 TTGGCTGCATCTCCATCTTC ATTCTCACGCGTTACTCACC 20 20 50.0 50.0 58.0 58.0 0.5 10.2 0.056274 91844 93923 2885-2885 0.333333 52.9 psbD-rns_p5 psbD-rns 5 GCTGCATCTCCATCTTCGAA ATTCTCACGCGTTACTCACC 20 20 50.0 50.0 58.1 58.0 0.0 10.2 0.062443 91844 93923 2882-2882 0.333333 52.8 rnl-psaC_p1 rnl-psaC 1 AGTTATCGTGCCAACGGTAC GCCTGGGGTTCTTATTGGAG 20 20 50.0 55.0 58.0 57.9 0.0 0.0 0.059022 98617 99456 1549-1549 0.333333 52.9 rnl-psaC_p2 rnl-psaC 2 TGATCTGACGATGCTGTGTG GCCTGGGGTTCTTATTGGAG 20 20 50.0 55.0 58.0 57.9 0.0 0.0 0.059022 98617 99456 1853-1853 0.333333 52.9 rnl-psaC_p3 rnl-psaC 3 GTGATCTGACGATGCTGTGT GCCTGGGGTTCTTATTGGAG 20 20 50.0 55.0 58.0 57.9 0.0 0.0 0.060405 98617 99456 1854-1854 0.333333 52.9 rnl-psaC_p4 rnl-psaC 4 TCTTTCGGGACTGAAGGAGT GCCTGGGGTTCTTATTGGAG 20 20 50.0 55.0 58.0 57.9 2.0 0.0 0.069715 98617 99456 2102-2102 0.333333 52.8 rnl-psaC_p5 rnl-psaC 5 AGTTATCGTGCCAACGGTAC AAGGCTGGCAAGGAGAAAAA 20 20 50.0 45.0 58.0 57.9 0.0 3.4 0.087040 98617 99456 1455-1455 0.333333 52.6 ccs1_p1 ccs1 1 ACCTCTTGGTTCCTTGGTTC TAAATGGACGACGCCGAAAA 20 20 50.0 45.0 57.3 58.2 0.0 0.0 0.865549 102735 104105 2044-2044 0.333333 46.4 ccs1_p2 ccs1 2 ACCTCTTGGTTCCTTGGTTC TTAAATGGACGACGCCGAAA 20 20 50.0 45.0 57.3 58.2 0.0 0.0 0.865549 102735 104105 2045-2045 0.333333 46.4 ccs1_p3 ccs1 3 ACCTCTTGGTTCCTTGGTTC TTTAAATGGACGACGCCGAA 20 20 50.0 45.0 57.3 58.2 0.0 0.0 0.865549 102735 104105 2046-2046 0.333333 46.4 ccs1_p4 ccs1 4 CCTCTTGGTTCCTTGGTTCT TAAATGGACGACGCCGAAAA 20 20 50.0 45.0 57.0 58.2 0.0 0.0 1.166207 102735 104105 2043-2043 0.333333 44.0 ccs1_p5 ccs1 5 CCTCTTGGTTCCTTGGTTCT TTAAATGGACGACGCCGAAA 20 20 50.0 45.0 57.0 58.2 0.0 0.0 1.166207 102735 104105 2044-2044 0.333333 44.0 secA-rpl27_p1 secA-rpl27 1 TAATGGCGTTCTTGCTTCGT TCGTGGACATAGACAACCCT 20 20 45.0 50.0 58.2 58.1 0.0 0.0 0.263644 106980 107911 1932-1932 0.333333 51.2 secA-rpl27_p2 secA-rpl27 2 TAATGGCGTTCTTGCTTCGT CGATTGCACAGACTTCAGGA 20 20 45.0 50.0 58.2 57.9 0.0 0.0 0.281275 106980 107911 2185-2185 0.333333 51.1 secA-rpl27_p3 secA-rpl27 3 AAACCGGCTAAGATTTGGCT TCGTGGACATAGACAACCCT 20 20 45.0 50.0 57.8 58.1 0.0 0.0 0.282921 106980 107911 1538-1538 0.333333 51.1 secA-rpl27_p4 secA-rpl27 4 AAACCGGCTAAGATTTGGCT CGATTGCACAGACTTCAGGA 20 20 45.0 50.0 57.8 57.9 0.0 0.0 0.300552 106980 107911 1791-1791 0.333333 50.9 secA-rpl27_p5 secA-rpl27 5 TAATGGCGTTCTTGCTTCGT GGGCAGGAAGTACACGAAAT 20 20 45.0 50.0 58.2 57.9 0.0 0.0 0.306091 106980 107911 1807-1807 0.333333 50.9 ycf54_p1 ycf54 1 TCCTGAAGTCTGTGCAATCG TCCTGAAGTCTGTGCAATCG 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.169219 109044 109787 1913-1913 0.333333 52.0 ycf54_p2 ycf54 2 CCCCACATTCTAGCCAAACA TCCTGAAGTCTGTGCAATCG 20 20 50.0 50.0 57.8 57.9 0.0 0.0 0.298986 109044 109787 1785-1785 0.333333 50.9 ycf54_p3 ycf54 3 TCCTGAAGTCTGTGCAATCG CCCCACATTCTAGCCAAACA 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.298986 109044 109787 1785-1785 0.333333 50.9 ycf54_p4 ycf54 4 CCCCACATTCTAGCCAAACA CCCCACATTCTAGCCAAACA 20 20 50.0 50.0 57.8 57.8 0.0 0.0 0.428752 109044 109787 1657-1657 0.333333 49.9 ycf54_p5 ycf54 5 TCCTGAAGTCTGTGCAATCG ACCATTGACCCGGTTTTAGC 20 20 50.0 50.0 57.9 58.5 0.0 0.0 0.543230 109044 109787 1944-1944 0.333333 49.0 rpl27-secA_p1 rpl27-secA 1 TCGTGGACATAGACAACCCT TAATGGCGTTCTTGCTTCGT 20 20 50.0 45.0 58.1 58.2 0.0 0.0 0.263644 111025 111956 1932-1932 0.333333 51.2 rpl27-secA_p2 rpl27-secA 2 CGATTGCACAGACTTCAGGA TAATGGCGTTCTTGCTTCGT 20 20 50.0 45.0 57.9 58.2 0.0 0.0 0.281275 111025 111956 2185-2185 0.333333 51.1 rpl27-secA_p3 rpl27-secA 3 TCGTGGACATAGACAACCCT AAACCGGCTAAGATTTGGCT 20 20 50.0 45.0 58.1 57.8 0.0 0.0 0.282921 111025 111956 1538-1538 0.333333 51.1 rpl27-secA_p4 rpl27-secA 4 CGATTGCACAGACTTCAGGA AAACCGGCTAAGATTTGGCT 20 20 50.0 45.0 57.9 57.8 0.0 0.0 0.300552 111025 111956 1791-1791 0.333333 50.9 rpl27-secA_p5 rpl27-secA 5 GGGCAGGAAGTACACGAAAT TAATGGCGTTCTTGCTTCGT 20 20 50.0 45.0 57.9 58.2 0.0 0.0 0.306091 111025 111956 1807-1807 0.333333 50.9 ccs1_p1 ccs1 1 TAAATGGACGACGCCGAAAA ACCTCTTGGTTCCTTGGTTC 20 20 45.0 50.0 58.2 57.3 0.0 0.0 0.865549 114831 116201 2044-2044 0.333333 46.4 ccs1_p2 ccs1 2 TTAAATGGACGACGCCGAAA ACCTCTTGGTTCCTTGGTTC 20 20 45.0 50.0 58.2 57.3 0.0 0.0 0.865549 114831 116201 2045-2045 0.333333 46.4 ccs1_p3 ccs1 3 TTTAAATGGACGACGCCGAA ACCTCTTGGTTCCTTGGTTC 20 20 45.0 50.0 58.2 57.3 0.0 0.0 0.865549 114831 116201 2046-2046 0.333333 46.4 ccs1_p4 ccs1 4 TAAATGGACGACGCCGAAAA CCTCTTGGTTCCTTGGTTCT 20 20 45.0 50.0 58.2 57.0 0.0 0.0 1.166207 114831 116201 2043-2043 0.333333 44.0 ccs1_p5 ccs1 5 TTAAATGGACGACGCCGAAA CCTCTTGGTTCCTTGGTTCT 20 20 45.0 50.0 58.2 57.0 0.0 0.0 1.166207 114831 116201 2044-2044 0.333333 44.0 ccs1-trnN_p1 ccs1-trnN 1 GGTTGGTTTACTTCGATTCCA AACATCGTAGCTGCTCATGG 21 20 42.9 50.0 56.2 58.1 0.0 4.9 2.882211 116202 116807 1913-1913 0.333333 30.3 ccs1-trnN_p2 ccs1-trnN 2 GGTTGGTTTACTTCGATTCCA CATCGTAGCTGCTCATGGTT 21 20 42.9 50.0 56.2 58.1 0.0 4.9 2.882211 116202 116807 1911-1911 0.333333 30.3 ccs1-trnN_p3 ccs1-trnN 3 GGTTGGTTTACTTCGATTCCA TTCTTCTTAGCAGCTTGGCC 21 20 42.9 50.0 56.2 58.2 0.0 0.0 3.001213 116202 116807 1835-1835 0.333333 29.3 ccs1-trnN_p4 ccs1-trnN 4 GGTTGGTTTACTTCGATTCCA ATCCGTGAAACAGCTGAAGG 21 20 42.9 50.0 56.2 58.2 0.0 23.3 3.014085 116202 116807 1982-1982 0.333333 29.2 ccs1-trnN_p5 ccs1-trnN 5 TGTTGGGTAGGAGGATTAACA CATCGTAGCTGCTCATGGTT 21 20 42.9 50.0 56.0 58.1 0.0 4.9 3.087022 116202 116807 1278-1278 0.333333 28.6 psaC-rnl_p1 psaC-rnl 1 GCCTGGGGTTCTTATTGGAG AGTTATCGTGCCAACGGTAC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.059022 119480 120319 1549-1549 0.333333 52.9 psaC-rnl_p2 psaC-rnl 2 GCCTGGGGTTCTTATTGGAG TGATCTGACGATGCTGTGTG 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.059022 119480 120319 1853-1853 0.333333 52.9 psaC-rnl_p3 psaC-rnl 3 GCCTGGGGTTCTTATTGGAG GTGATCTGACGATGCTGTGT 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.060405 119480 120319 1854-1854 0.333333 52.9 psaC-rnl_p4 psaC-rnl 4 GCCTGGGGTTCTTATTGGAG TCTTTCGGGACTGAAGGAGT 20 20 55.0 50.0 57.9 58.0 0.0 2.0 0.069715 119480 120319 2102-2102 0.333333 52.8 psaC-rnl_p5 psaC-rnl 5 AAGGCTGGCAAGGAGAAAAA AGTTATCGTGCCAACGGTAC 20 20 45.0 50.0 57.9 58.0 3.4 0.0 0.087040 119480 120319 1455-1455 0.333333 52.6 rns-psbD_p1 rns-psbD 1 ATTCTCACGCGTTACTCACC TTCAACCGTTGCTCCATGAA 20 20 50.0 45.0 58.0 58.0 10.2 6.4 0.033565 125013 127092 2853-2853 0.333333 53.1 rns-psbD_p2 rns-psbD 2 ATTCTCACGCGTTACTCACC TTTCAACCGTTGCTCCATGA 20 20 50.0 45.0 58.0 58.0 10.2 6.4 0.033565 125013 127092 2854-2854 0.333333 53.1 rns-psbD_p3 rns-psbD 3 ATTCTCACGCGTTACTCACC AAAGCTAGGGCATTGTACGG 20 20 50.0 50.0 58.0 58.0 10.2 0.0 0.046217 125013 127092 2633-2633 0.333333 53.0 rns-psbD_p4 rns-psbD 4 ATTCTCACGCGTTACTCACC TTGGCTGCATCTCCATCTTC 20 20 50.0 50.0 58.0 58.0 10.2 0.5 0.056274 125013 127092 2885-2885 0.333333 52.9 rns-psbD_p5 rns-psbD 5 ATTCTCACGCGTTACTCACC GCTGCATCTCCATCTTCGAA 20 20 50.0 50.0 58.0 58.1 10.2 0.0 0.062443 125013 127092 2882-2882 0.333333 52.8