feature_id	feature_type	parent_gene	label_name	start	end	strand	length_bp	region	pi	variable_sites	indel_sites	conserved_left_bp	conserved_right_bp	primer_available	species_resolution	unique_haplotype_count	species_specific_haplotype_ratio	interspecific_divergence	alignment_reliability	markerseek_score
trnM	tRNA	trnM	trnM	190	263	1	74	LSC	NA	0	74	189	300	no	0.333333	2	0.500000	NA	0.000000	26.700000
IGS_001	igs	trnM|psaD	trnM-psaD	264	362	0	99	LSC	NA	0	99	263	300	no	0.333333	2	0.500000	NA	0.000000	27.500000
psaD	gene	psaD	psaD	363	794	1	432	LSC	NA	0	432	300	276	no	0.333333	2	0.500000	NA	0.000000	30.200000
IGS_002	igs	psaD|trnS	psaD-trnS	795	839	0	45	LSC	NA	0	45	300	231	no	0.333333	2	0.500000	NA	0.000000	27.500000
trnS	tRNA	trnS	trnS	840	924	1	85	LSC	NA	0	85	300	146	no	0.333333	2	0.500000	NA	0.000000	23.400000
IGS_003	igs	trnS|ilvB	trnS-ilvB	925	1066	0	142	LSC	NA	0	142	300	4	no	0.333333	2	0.500000	NA	0.000000	12.800000
ilvB	gene	ilvB	ilvB	1067	2959	1	1893	LSC	0.202239	498	157	300	5	no	1.000000	3	1.000000	0.200752	0.928156	82.000000
IGS_004	igs	ilvB|trnY(GUA)	ilvB-trnY(GUA)	2960	2968	0	9	LSC	0.416667	2	6	25	1	no	1.000000	3	1.000000	NA	0.444444	65.600000
trnY(GUA)	tRNA	trnY(GUA)	trnY(GUA)	2969	3051	-1	83	LSC	0.096386	12	0	1	2	no	1.000000	3	1.000000	0.096386	1.000000	72.600000
IGS_005	igs	trnY(GUA)|psaA	trnY(GUA)-psaA	3052	3242	0	191	LSC	0.241758	59	28	6	27	no	1.000000	3	1.000000	0.240736	0.952880	76.600000
psaA	gene	psaA	psaA	3243	5513	1	2271	LSC	0.118744	392	6	1	0	no	1.000000	3	1.000000	0.118962	1.000000	77.400000
IGS_006	igs	psaA|psaB	psaA-psaB	5514	5626	0	113	LSC	0.333333	38	37	2	29	no	1.000000	3	1.000000	0.336288	0.734513	69.400000
psaB	gene	psaB	psaB	5627	7831	1	2205	LSC	0.121088	385	0	1	0	no	1.000000	3	1.000000	0.121088	1.000000	77.300000
IGS_007	igs	psaB|rps14	psaB-rps14	7832	7886	0	55	LSC	0.266667	20	2	12	26	no	1.000000	3	1.000000	0.261864	1.000000	77.600000
rps14	gene	rps14	rps14	7887	8189	1	303	LSC	0.184818	81	0	5	1	no	1.000000	3	1.000000	0.184818	1.000000	72.600000
IGS_008	igs	rps14|petG	rps14-petG	8190	8239	0	50	LSC	0.440000	28	13	9	3	no	1.000000	3	1.000000	0.447250	1.000000	76.300000
petG	gene	petG	petG	8240	8353	-1	114	LSC	0.198830	32	0	0	2	no	1.000000	3	1.000000	0.198830	1.000000	72.500000
IGS_009	igs	petG|psbK	petG-psbK	8354	8483	0	130	LSC	0.407960	29	118	5	3	no	1.000000	3	1.000000	NA	0.515385	66.700000
psbK	gene	psbK	psbK	8484	8618	-1	135	LSC	0.101235	20	0	0	1	no	1.000000	3	1.000000	0.101235	1.000000	72.500000
IGS_010	igs	psbK|trnT(UGU)	psbK-trnT(UGU)	8619	8734	0	116	LSC	0.340278	42	38	9	14	no	1.000000	3	1.000000	0.345887	0.827586	72.100000
trnT(UGU)	tRNA	trnT(UGU)	trnT(UGU)	8735	8807	-1	73	LSC	0.027397	3	0	0	3	no	0.333333	2	0.500000	0.027397	1.000000	42.500000
IGS_011	igs	trnT(UGU)|rpl20	trnT(UGU)-rpl20	8808	8865	0	58	LSC	0.411765	27	17	15	0	no	1.000000	3	1.000000	0.361709	0.879310	72.900000
rpl20	gene	rpl20	rpl20	8866	9243	-1	378	LSC	0.194885	103	4	0	0	no	1.000000	3	1.000000	0.190820	1.000000	75.300000
IGS_012	igs	rpl20|rpl35	rpl20-rpl35	9244	9300	0	57	LSC	0.480769	35	5	9	3	no	1.000000	3	1.000000	0.480769	0.912281	76.100000
rpl35	gene	rpl35	rpl35	9301	9492	-1	192	LSC	0.203125	56	0	2	3	no	1.000000	3	1.000000	0.203125	1.000000	72.600000
IGS_013	igs	rpl35|acsF	rpl35-acsF	9493	9610	0	118	LSC	0.410494	53	57	6	5	no	1.000000	3	1.000000	0.363777	0.915254	72.200000
acsF	gene	acsF	acsF	9611	10669	-1	1059	LSC	0.189487	287	0	0	5	no	1.000000	3	1.000000	0.189487	1.000000	78.800000
IGS_014	igs	acsF|trnC(GCA)	acsF-trnC(GCA)	10670	10872	0	203	LSC	0.408602	102	46	2	1	no	1.000000	3	1.000000	0.424431	0.916256	74.500000
trnC(GCA)	tRNA	trnC(GCA)	trnC(GCA)	10873	10944	1	72	LSC	0.092593	9	2	2	1	no	1.000000	3	1.000000	0.094577	1.000000	75.800000
IGS_015	igs	trnC(GCA)|ilvH	trnC(GCA)-ilvH	10945	11217	0	273	LSC	0.138677	52	12	5	7	no	1.000000	3	1.000000	0.139013	0.959707	77.000000
ilvH	gene	ilvH	ilvH	11218	11724	-1	507	LSC	0.198935	140	6	0	0	no	1.000000	3	1.000000	0.198935	0.988166	77.900000
IGS_016	igs	ilvH|tsf	ilvH-tsf	11725	11912	0	188	LSC	0.379888	89	30	11	1	no	1.000000	3	1.000000	0.376112	0.952128	76.100000
tsf	gene	tsf	tsf	11913	12515	1	603	LSC	0.180210	153	3	0	0	no	1.000000	3	1.000000	0.178513	1.000000	79.300000
IGS_017	igs	tsf|petA	tsf-petA	12516	12570	0	55	LSC	0.341085	20	19	1	9	no	1.000000	3	1.000000	0.352283	0.781818	70.200000
petA	gene	petA	petA	12571	13530	-1	960	LSC	0.190476	258	15	4	5	no	1.000000	3	1.000000	0.190476	0.984375	80.500000
IGS_018	igs	petA|tatC	petA-tatC	13531	13577	0	47	LSC	0.248227	16	0	6	1	no	1.000000	3	1.000000	0.248227	1.000000	72.600000
tatC	gene	tatC	tatC	13578	14324	-1	747	LSC	0.446244	451	51	0	3	yes	1.000000	3	1.000000	0.453231	0.991968	84.100000
IGS_019	igs	tatC|atpE	tatC-atpE	14325	14352	0	28	LSC	0.384615	7	17	2	6	no	1.000000	3	1.000000	NA	0.464286	66.000000
atpE	gene	atpE	atpE	14353	14862	-1	510	LSC	0.242484	172	8	0	1	no	1.000000	3	1.000000	0.242494	1.000000	78.700000
IGS_020	igs	atpE|cbbX	atpE-cbbX	14863	14981	0	119	LSC	0.417367	64	28	3	1	no	1.000000	3	1.000000	0.400156	1.000000	76.400000
cbbX	gene	cbbX	cbbX	14982	15956	-1	975	LSC	0.190085	261	6	1	3	no	1.000000	3	1.000000	0.189529	1.000000	79.500000
IGS_021	igs	cbbX|rbcS	cbbX-rbcS	15957	16047	0	91	LSC	0.373626	46	12	9	3	no	1.000000	3	1.000000	0.367042	1.000000	77.600000
rbcS	gene	rbcS	rbcS	16048	16470	-1	423	LSC	0.148148	89	0	1	2	no	1.000000	3	1.000000	0.148148	1.000000	75.100000
IGS_022	igs	rbcS|rbcL	rbcS-rbcL	16471	16540	0	70	LSC	0.343750	29	8	9	6	no	1.000000	3	1.000000	0.340054	0.914286	76.000000
rbcL	gene	rbcL	rbcL	16541	18007	-1	1467	LSC	0.099750	216	0	0	2	no	1.000000	3	1.000000	0.099750	1.000000	78.800000
IGS_023	igs	rbcL|rps4	rbcL-rps4	18008	18175	0	168	LSC	0.406746	83	58	5	3	no	1.000000	3	1.000000	0.379973	1.000000	75.400000
rps4	gene	rps4	rps4	18176	18862	-1	687	LSC	0.176128	173	1	0	1	no	1.000000	3	1.000000	0.176313	1.000000	78.900000
IGS_024	igs	rps4|trnH(GUG)	rps4-trnH(GUG)	18863	18957	0	95	LSC	0.389474	50	18	1	1	no	1.000000	3	1.000000	0.386622	1.000000	76.900000
trnH(GUG)	tRNA	trnH(GUG)	trnH(GUG)	18958	19033	-1	76	LSC	0.105263	10	3	1	2	no	1.000000	3	1.000000	0.089522	1.000000	77.100000
IGS_025	igs	trnH(GUG)|rpl19	trnH(GUG)-rpl19	19034	20348	0	1315	LSC	0.360608	617	155	8	1	yes	1.000000	3	1.000000	0.353539	0.966540	83.100000
rpl19	gene	rpl19	rpl19	20349	20720	1	372	LSC	0.221326	118	7	1	3	no	1.000000	3	1.000000	0.220608	1.000000	76.200000
IGS_026	igs	rpl19|trnM(cau)	rpl19-trnM(cau)	20721	20723	0	3	LSC	0.000000	0	0	2	0	no	0.000000	1	0.000000	NA	1.000000	18.800000
trnM(cau)	tRNA	trnM(cau)	trnM(cau)	20724	20807	-1	84	LSC	0.119048	15	0	5	10	no	1.000000	3	1.000000	0.119048	1.000000	72.900000
IGS_027	igs	trnM(cau)|trnK(ttt)	trnM(cau)-trnK(ttt)	20808	20834	0	27	LSC	0.407407	8	19	3	9	no	1.000000	3	1.000000	NA	0.666667	68.600000
trnK(ttt)	tRNA	trnK(ttt)	trnK(ttt)	20835	20896	-1	62	LSC	0.096774	9	1	0	0	no	1.000000	3	1.000000	0.098096	1.000000	74.300000
IGS_028	igs	trnK(ttt)|trnR(ccg)	trnK(ttt)-trnR(ccg)	20897	20921	0	25	LSC	0.460317	11	10	22	0	no	1.000000	3	1.000000	NA	0.840000	70.900000
trnR(ccg)	tRNA	trnR(ccg)	trnR(ccg)	20922	20994	-1	73	LSC	0.500000	20	57	0	1	no	1.000000	3	1.000000	NA	0.465753	65.800000
IGS_029	igs	trnR(ccg)|atpB	trnR(ccg)-atpB	20995	21037	0	43	LSC	0.395062	13	31	28	6	no	1.000000	3	1.000000	NA	0.627907	68.300000
atpB	gene	atpB	atpB	21038	22468	-1	1431	LSC	0.131144	273	0	0	3	no	1.000000	3	1.000000	0.131144	1.000000	78.800000
IGS_030	igs	atpB|ycf3	atpB-ycf3	22469	22544	0	76	LSC	0.364444	36	11	3	14	no	1.000000	3	1.000000	0.352325	0.986842	77.200000
ycf3	gene	ycf3	ycf3	22545	23054	-1	510	LSC	0.111765	83	0	0	1	no	1.000000	3	1.000000	0.111765	1.000000	76.900000
IGS_031	igs	ycf3|rpl33	ycf3-rpl33	23055	23451	0	397	LSC	0.198122	97	61	5	6	no	1.000000	3	1.000000	0.189736	0.894207	77.100000
rpl33	gene	rpl33	rpl33	23452	23646	-1	195	LSC	0.165812	47	0	1	1	no	1.000000	3	1.000000	0.165812	1.000000	72.600000
IGS_032	igs	rpl33|rps20	rpl33-rps20	23647	23893	0	247	LSC	0.341308	92	87	11	20	no	1.000000	3	1.000000	0.320684	0.846154	72.400000
rps20	gene	rps20	rps20	23894	24226	1	333	LSC	0.307849	140	17	0	61	no	1.000000	3	1.000000	0.308723	0.981982	78.500000
IGS_033	igs	rps20|rpoB	rps20-rpoB	24227	24389	0	163	LSC	0.347032	34	98	3	5	no	1.000000	3	1.000000	0.343238	0.447853	65.800000
rpoB	gene	rpoB	rpoB	24390	28076	1	3687	LSC	0.216186	1085	144	2	1	no	1.000000	3	1.000000	0.215097	0.968538	78.400000
IGS_034	igs	rpoB|rpoC1	rpoB-rpoC1	28077	28133	0	57	LSC	0.366013	22	31	1	0	no	1.000000	3	1.000000	0.293694	0.894737	71.200000
rpoC1	gene	rpoC1	rpoC1	28134	30209	1	2076	LSC	0.231835	664	36	0	0	no	1.000000	3	1.000000	0.229873	0.996628	79.500000
IGS_035	igs	rpoC1|rpoC2	rpoC1-rpoC2	30210	30213	0	4	LSC	0.583333	3	0	0	3	no	1.000000	3	1.000000	NA	1.000000	72.500000
rpoC2	gene	rpoC2	rpoC2	30214	33672	1	3459	LSC	0.258776	1190	227	0	2	no	1.000000	3	1.000000	0.257243	0.952587	79.400000
IGS_036	igs	rpoC2|rps2	rpoC2-rps2	33673	33719	0	47	LSC	0.343137	14	25	0	3	no	1.000000	3	1.000000	0.273619	0.723404	69.000000
rps2	gene	rps2	rps2	33720	34472	1	753	LSC	0.168037	172	33	0	0	yes	1.000000	3	1.000000	0.166020	0.969456	83.100000
IGS_037	igs	rps2|atpI	rps2-atpI	34473	34643	0	171	LSC	0.354839	71	57	0	4	no	1.000000	3	1.000000	0.344063	0.906433	73.100000
atpI	gene	atpI	atpI	34644	35351	1	708	LSC	0.170433	171	0	2	2	no	1.000000	3	1.000000	0.170433	1.000000	78.900000
IGS_038	igs	atpI|atpH	atpI-atpH	35352	35406	0	55	LSC	0.278788	20	2	6	15	no	1.000000	3	1.000000	0.260263	1.000000	77.100000
atpH	gene	atpH	atpH	35407	35655	1	249	LSC	0.097724	35	0	7	2	no	1.000000	3	1.000000	0.097724	1.000000	72.600000
IGS_039	igs	atpH|atpG	atpH-atpG	35656	35726	0	71	LSC	0.356808	36	1	12	4	no	1.000000	3	1.000000	0.359759	1.000000	74.400000
atpG	gene	atpG	atpG	35727	36185	1	459	LSC	0.254902	164	0	1	0	no	1.000000	3	1.000000	0.254902	1.000000	75.800000
IGS_040	igs	atpG|atpF	atpG-atpF	36186	36232	0	47	LSC	0.222222	9	26	5	4	no	1.000000	3	1.000000	0.230159	0.638298	68.300000
atpF	gene	atpF	atpF	36233	36766	1	534	LSC	0.239076	178	0	1	5	no	1.000000	3	1.000000	0.239076	1.000000	77.400000
IGS_041	igs	atpF|atpD	atpF-atpD	36767	36861	0	95	LSC	0.256140	35	0	6	0	no	1.000000	3	1.000000	0.256140	1.000000	72.500000
atpD	gene	atpD	atpD	36862	37371	1	510	LSC	0.314191	223	8	2	6	no	1.000000	3	1.000000	0.312877	0.990196	78.600000
IGS_042	igs	atpD|atpA	atpD-atpA	37372	37523	0	152	LSC	0.388278	49	64	5	8	no	1.000000	3	1.000000	0.382742	0.598684	67.900000
atpA	gene	atpA	atpA	37524	39032	1	1509	LSC	0.145129	312	0	3	0	no	1.000000	3	1.000000	0.145129	1.000000	78.700000
IGS_043	igs	atpA|sufC	atpA-sufC	39033	39095	0	63	LSC	0.477477	24	26	0	3	no	1.000000	3	1.000000	0.477477	0.587302	67.300000
sufC	gene	sufC	sufC	39096	39848	-1	753	LSC	0.216910	227	11	0	0	no	1.000000	3	1.000000	0.217443	1.000000	80.400000
IGS_044	igs	sufC|sufB	sufC-sufB	39849	39853	0	5	LSC	0.333333	2	2	3	3	no	1.000000	3	1.000000	NA	1.000000	74.800000
sufB	gene	sufB	sufB	39854	41311	-1	1458	LSC	0.178326	368	3	2	1	no	1.000000	3	1.000000	0.178136	1.000000	79.100000
IGS_045	igs	sufB|trnL(CAA)	sufB-trnL(CAA)	41312	41429	0	118	LSC	0.419540	61	28	3	1	no	1.000000	3	1.000000	0.379776	0.983051	76.000000
trnL(CAA)	tRNA	trnL(CAA)	trnL(CAA)	41430	41511	1	82	LSC	0.113821	14	0	0	1	no	1.000000	3	1.000000	0.113821	1.000000	72.500000
IGS_046	igs	trnL(CAA)|psbV	trnL(CAA)-psbV	41512	41590	0	79	LSC	0.311966	29	30	2	2	no	1.000000	3	1.000000	0.291296	0.987342	74.700000
psbV	gene	psbV	psbV	41591	42085	1	495	LSC	0.164310	114	3	0	2	no	1.000000	3	1.000000	0.163661	1.000000	77.300000
IGS_047	igs	psbV|ycf19	psbV-ycf19	42086	42123	0	38	LSC	0.306306	15	5	6	3	no	1.000000	3	1.000000	0.295386	0.973684	77.000000
ycf19	gene	ycf19	ycf19	42124	42546	1	423	LSC	0.308117	180	31	0	0	no	1.000000	3	1.000000	0.305826	1.000000	80.500000
IGS_048	igs	ycf19|rps16	ycf19-rps16	42547	42672	0	126	LSC	0.447811	57	49	3	12	no	1.000000	3	1.000000	0.427137	0.785714	70.000000
rps16	gene	rps16	rps16	42673	42915	1	243	LSC	0.198903	67	0	0	1	no	1.000000	3	1.000000	0.198903	1.000000	72.500000
IGS_049	igs	rps16|groEL	rps16-groEL	42916	42951	0	36	LSC	0.425287	16	8	3	3	no	1.000000	3	1.000000	0.410509	0.805556	72.200000
groEL	gene	groEL	groEL	42952	44520	-1	1569	LSC	0.228808	508	2	0	1	no	1.000000	3	1.000000	0.229021	1.000000	78.800000
IGS_050	igs	groEL|trnR	groEL-trnR	44521	44661	0	141	LSC	0.383481	56	51	5	3	no	1.000000	3	1.000000	0.363495	0.801418	70.700000
trnR	tRNA	trnR	trnR	44662	44735	1	74	LSC	0.072072	8	0	2	0	no	1.000000	3	1.000000	0.072072	1.000000	72.500000
IGS_051	igs	trnR|trnQ(UUG)	trnR-trnQ(UUG)	44736	44780	0	45	LSC	0.444444	23	29	5	4	no	1.000000	3	1.000000	NA	1.000000	72.800000
trnQ(UUG)	tRNA	trnQ(UUG)	trnQ(UUG)	44781	44853	1	73	LSC	0.132420	14	0	0	1	no	1.000000	3	1.000000	0.132420	1.000000	72.500000
IGS_052	igs	trnQ(UUG)|psbW	trnQ(UUG)-psbW	44854	44875	0	22	LSC	0.318182	10	1	0	1	no	1.000000	3	1.000000	0.327561	1.000000	77.700000
psbW	gene	psbW	psbW	44876	45226	1	351	LSC	0.307692	153	22	0	0	no	1.000000	3	1.000000	0.316948	1.000000	79.200000
IGS_053	igs	psbW|clpC	psbW-clpC	45227	45861	0	635	LSC	0.343434	290	124	1	0	yes	1.000000	3	1.000000	0.343362	0.987402	82.700000
clpC	gene	clpC	clpC	45862	49128	1	3267	LSC	0.268250	1172	248	0	0	no	1.000000	3	1.000000	0.261908	0.979798	80.200000
IGS_054	igs	clpC|trnF(GAA)	clpC-trnF(GAA)	49129	49218	0	90	LSC	0.448718	48	16	1	4	no	1.000000	3	1.000000	0.445946	0.866667	73.900000
trnF(GAA)	tRNA	trnF(GAA)	trnF(GAA)	49219	49291	1	73	LSC	0.045662	5	0	0	0	no	0.333333	2	0.500000	0.045662	1.000000	54.100000
IGS_055	igs	trnF(GAA)|dnaB	trnF(GAA)-dnaB	49292	50413	0	1122	LSC	0.500000	1	1121	14	8	no	1.000000	3	1.000000	NA	0.001783	54.500000
dnaB	gene	dnaB	dnaB	50414	52186	-1	1773	LSC	0.267210	642	121	300	0	yes	1.000000	3	1.000000	0.262498	0.969543	83.000000
IGS_056	igs	dnaB|trnW	dnaB-trnW	52187	52290	0	104	LSC	0.453333	62	8	3	71	no	1.000000	3	1.000000	0.438472	0.961538	77.300000
trnW	tRNA	trnW	trnW	52291	52363	1	73	LSC	0.009132	1	0	0	0	no	0.333333	2	0.500000	0.009132	1.000000	30.800000
IGS_057	igs	trnW|rpl11	trnW-rpl11	52364	52419	0	56	LSC	0.279762	21	8	1	20	no	1.000000	3	1.000000	0.256944	1.000000	77.300000
rpl11	gene	rpl11	rpl11	52420	52845	1	426	LSC	0.143082	84	6	0	0	no	1.000000	3	1.000000	0.142400	0.995305	76.600000
IGS_058	igs	rpl11|rpl1	rpl11-rpl1	52846	52878	0	33	LSC	0.269231	9	9	0	9	no	1.000000	3	1.000000	0.255342	0.787879	71.000000
rpl1	gene	rpl1	rpl1	52879	53571	1	693	LSC	0.155588	154	1	7	20	no	1.000000	3	1.000000	0.155588	0.998557	79.400000
IGS_059	igs	rpl1|rpl12	rpl1-rpl12	53572	53687	0	116	LSC	0.271739	33	34	12	13	no	1.000000	3	1.000000	0.245493	0.793103	71.900000
rpl12	gene	rpl12	rpl12	53688	54086	1	399	LSC	0.147766	84	11	1	0	no	1.000000	3	1.000000	0.147766	0.972431	77.100000
IGS_060	igs	rpl12|acpP	rpl12-acpP	54087	54124	0	38	LSC	0.359649	16	10	6	3	no	1.000000	3	1.000000	0.298246	1.000000	76.200000
acpP	gene	acpP	acpP	54125	54538	-1	414	LSC	0.161836	95	0	0	1	no	1.000000	3	1.000000	0.161836	1.000000	74.900000
IGS_061	igs	acpP|trnP	acpP-trnP	54539	55740	0	1202	LSC	0.381410	97	1068	9	28	yes	1.000000	3	1.000000	0.381051	0.173045	66.700000
trnP	tRNA	trnP	trnP	55741	55814	1	74	LSC	0.054054	6	0	1	2	no	1.000000	3	1.000000	0.054054	1.000000	70.200000
IGS_062	igs	trnP|trnE(UUC)	trnP-trnE(UUC)	55815	55852	0	38	LSC	0.368421	19	6	7	40	no	1.000000	3	1.000000	0.390351	1.000000	77.600000
trnE(UUC)	tRNA	trnE(UUC)	trnE(UUC)	55853	55925	-1	73	LSC	0.018265	2	0	0	0	no	1.000000	3	1.000000	0.018265	1.000000	49.100000
IGS_063	igs	trnE(UUC)|trnK(UUU)	trnE(UUC)-trnK(UUU)	55926	56438	0	513	LSC	0.344262	224	92	19	5	no	1.000000	3	1.000000	0.338450	0.951267	80.600000
trnK(UUU)	tRNA	trnK(UUU)	trnK(UUU)	56439	56510	-1	72	LSC	0.046296	5	0	0	0	no	1.000000	3	1.000000	0.046296	1.000000	67.000000
IGS_064	igs	trnK(UUU)|ycf12	trnK(UUU)-ycf12	56511	56588	0	78	LSC	0.246753	25	17	4	8	no	1.000000	3	1.000000	0.238663	0.987179	76.500000
ycf12	gene	ycf12	ycf12	56589	56687	1	99	LSC	0.141414	18	0	1	0	no	1.000000	3	1.000000	0.141414	1.000000	72.500000
IGS_065	igs	ycf12|psbB	ycf12-psbB	56688	56823	0	136	LSC	0.305322	50	24	2	17	no	1.000000	3	1.000000	0.319328	0.875000	74.200000
psbB	gene	psbB	psbB	56824	58353	1	1530	LSC	0.118736	264	0	0	0	no	1.000000	3	1.000000	0.118736	1.000000	78.700000
IGS_066	igs	psbB|psbT	psbB-psbT	58354	58444	0	91	LSC	0.290476	27	24	3	20	no	1.000000	3	1.000000	0.289409	0.769231	70.900000
psbT	gene	psbT	psbT	58445	58540	1	96	LSC	0.090278	12	0	4	4	no	1.000000	3	1.000000	0.090278	1.000000	72.800000
IGS_067	igs	psbT|psbN	psbT-psbN	58541	58554	0	14	LSC	0.361111	5	3	3	6	no	1.000000	3	1.000000	NA	0.857143	73.500000
psbN	gene	psbN	psbN	58555	58689	-1	135	LSC	0.135802	26	0	3	1	no	1.000000	3	1.000000	0.135802	1.000000	72.600000
IGS_068	igs	psbN|psbH	psbN-psbH	58690	58761	0	72	LSC	0.388889	37	21	8	5	no	1.000000	3	1.000000	0.411492	1.000000	76.100000
psbH	gene	psbH	psbH	58762	58965	1	204	LSC	0.109477	32	1	1	1	no	1.000000	3	1.000000	0.109847	1.000000	73.100000
IGS_069	igs	psbH|psaE	psbH-psaE	58966	59020	0	55	LSC	0.430303	27	26	1	4	no	1.000000	3	1.000000	0.363845	1.000000	73.900000
psaE	gene	psaE	psaE	59021	59209	-1	189	LSC	0.167549	45	0	3	6	no	1.000000	3	1.000000	0.167549	1.000000	72.700000
IGS_070	igs	psaE|fstH	psaE-fstH	59210	59398	0	189	LSC	0.312169	82	28	14	2	no	1.000000	3	1.000000	0.336837	1.000000	77.400000
fstH	gene	fstH	fstH	59399	61084	1	1686	LSC	0.201858	484	6	0	0	no	1.000000	3	1.000000	0.201990	1.000000	78.800000
IGS_071	igs	fstH|psaJ	fstH-psaJ	61085	61145	0	61	LSC	0.350427	18	37	1	7	no	1.000000	3	1.000000	0.388889	0.639344	68.100000
psaJ	gene	psaJ	psaJ	61146	61274	-1	129	LSC	0.149871	29	1	2	22	no	1.000000	3	1.000000	0.150678	1.000000	73.500000
IGS_072	igs	psaJ|psaF	psaJ-psaF	61275	61329	0	55	LSC	0.325203	17	30	3	9	no	1.000000	3	1.000000	0.370081	0.745455	69.500000
psaF	gene	psaF	psaF	61330	61917	-1	588	LSC	0.222222	181	9	5	0	no	1.000000	3	1.000000	0.220005	1.000000	80.300000
IGS_073	igs	psaF|trnD(GUC)	psaF-trnD(GUC)	61918	61999	0	82	LSC	0.333333	36	12	0	0	no	1.000000	3	1.000000	0.332112	0.951220	76.100000
trnD(GUC)	tRNA	trnD(GUC)	trnD(GUC)	62000	62074	-1	75	LSC	0.111111	12	0	0	2	no	1.000000	3	1.000000	0.111111	1.000000	72.500000
IGS_074	igs	trnD(GUC)|trnS(GCU)	trnD(GUC)-trnS(GCU)	62075	62128	0	54	LSC	0.416667	17	51	1	0	no	1.000000	3	1.000000	NA	0.740741	69.300000
trnS(GCU)	tRNA	trnS(GCU)	trnS(GCU)	62129	62217	-1	89	LSC	0.127341	17	0	0	15	no	1.000000	3	1.000000	0.127341	1.000000	72.500000
IGS_075	igs	trnS(GCU)|trnM(CAU)	trnS(GCU)-trnM(CAU)	62218	62261	0	44	LSC	0.298851	12	22	6	14	no	1.000000	3	1.000000	0.289446	0.659091	68.700000
trnM(CAU)	tRNA	trnM(CAU)	trnM(CAU)	62262	62335	-1	74	LSC	0.018018	2	0	1	1	no	0.333333	2	0.500000	0.018018	1.000000	36.600000
IGS_076	igs	trnM(CAU)|petD	trnM(CAU)-petD	62336	62409	0	74	LSC	0.340278	22	29	25	6	no	1.000000	3	1.000000	0.311111	0.648649	68.600000
petD	gene	petD	petD	62410	62892	-1	483	LSC	0.127674	90	0	0	7	no	1.000000	3	1.000000	0.127674	1.000000	76.300000
IGS_077	igs	petD|petB	petD-petB	62893	62963	0	71	LSC	0.412698	35	18	17	9	no	1.000000	3	1.000000	0.425071	0.887324	74.200000
petB	gene	petB	petB	62964	63611	-1	648	LSC	0.123457	115	0	0	1	no	1.000000	3	1.000000	0.123457	1.000000	78.800000
IGS_078	igs	petB|psbI	petB-psbI	63612	63750	0	139	LSC	0.310345	38	59	9	5	no	1.000000	3	1.000000	0.319109	0.625899	68.200000
psbI	gene	psbI	psbI	63751	63858	-1	108	LSC	0.117284	18	0	0	1	no	1.000000	3	1.000000	0.117284	1.000000	72.500000
IGS_079	igs	psbI|ycf66	psbI-ycf66	63859	63950	0	92	LSC	0.329502	38	29	6	5	no	1.000000	3	1.000000	0.309198	0.945652	74.600000
ycf66	gene	ycf66	ycf66	63951	64238	-1	288	LSC	0.168981	68	0	0	0	no	1.000000	3	1.000000	0.168981	1.000000	72.500000
IGS_080	igs	ycf66|psbX	ycf66-psbX	64239	64240	0	2	LSC	0.500000	1	1	3	3	no	1.000000	3	1.000000	NA	1.000000	73.800000
psbX	gene	psbX	psbX	64241	64366	-1	126	LSC	0.195767	36	0	1	2	no	1.000000	3	1.000000	0.195767	1.000000	72.600000
IGS_081	igs	psbX|ftrB	psbX-ftrB	64367	64465	0	99	LSC	0.374532	43	36	6	0	no	1.000000	3	1.000000	0.413442	0.898990	72.600000
ftrB	gene	ftrB	ftrB	64466	64768	-1	303	LSC	0.173817	73	2	1	0	no	1.000000	3	1.000000	0.170133	1.000000	73.300000
IGS_082	igs	ftrB|psaI	ftrB-psaI	64769	64973	0	205	LSC	0.359649	74	68	2	23	no	1.000000	3	1.000000	0.351037	0.741463	69.500000
psaI	gene	psaI	psaI	64974	65084	1	111	LSC	0.145062	22	3	0	8	no	1.000000	3	1.000000	0.145062	0.972973	75.000000
IGS_083	igs	psaI|psbJ	psaI-psbJ	65085	65151	0	67	LSC	0.386243	31	29	3	15	no	1.000000	3	1.000000	0.409496	0.940299	73.100000
psbJ	gene	psbJ	psbJ	65152	65274	-1	123	LSC	0.113821	20	0	0	1	no	1.000000	3	1.000000	0.113821	1.000000	72.500000
IGS_084	igs	psbJ|psbL	psbJ-psbL	65275	65374	0	100	LSC	0.208333	10	76	8	3	no	1.000000	3	1.000000	0.258333	0.400000	65.200000
psbL	gene	psbL	psbL	65375	65491	-1	117	LSC	0.108262	19	0	67	1	no	1.000000	3	1.000000	0.108262	1.000000	72.600000
IGS_085	igs	psbL|psbF	psbL-psbF	65492	65505	0	14	LSC	0.333333	6	1	6	27	no	1.000000	3	1.000000	NA	1.000000	78.500000
psbF	gene	psbF	psbF	65506	65637	-1	132	LSC	0.101010	20	0	0	1	no	1.000000	3	1.000000	0.101010	1.000000	72.500000
IGS_086	igs	psbF|psbE	psbF-psbE	65638	65685	0	48	LSC	0.402778	21	37	5	18	no	1.000000	3	1.000000	NA	1.000000	72.900000
psbE	gene	psbE	psbE	65686	65931	-1	246	LSC	0.065041	23	0	2	0	no	1.000000	3	1.000000	0.065041	1.000000	71.700000
IGS_087	igs	psbE|trnG(UCC)	psbE-trnG(UCC)	65932	66029	0	98	LSC	0.264840	25	33	26	28	no	1.000000	3	1.000000	0.244733	0.744898	71.300000
trnG(UCC)	tRNA	trnG(UCC)	trnG(UCC)	66030	66100	-1	71	LSC	0.028169	3	0	2	2	no	0.333333	2	0.500000	0.028169	1.000000	43.100000
IGS_088	igs	trnG(UCC)|ycf4	trnG(UCC)-ycf4	66101	66154	0	54	LSC	0.358974	26	6	26	5	no	1.000000	3	1.000000	0.355235	0.962963	77.100000
ycf4	gene	ycf4	ycf4	66155	66706	-1	552	LSC	0.189010	148	0	1	4	no	1.000000	3	1.000000	0.189010	1.000000	77.800000
IGS_089	igs	ycf4|petL	ycf4-petL	66707	66761	0	55	LSC	0.421384	28	14	9	24	no	1.000000	3	1.000000	0.393153	0.963636	75.900000
petL	gene	petL	petL	66762	66857	-1	96	LSC	0.104167	15	1	8	8	no	1.000000	3	1.000000	0.105044	1.000000	74.300000
IGS_090	igs	petL|psaL	petL-psaL	66858	67046	0	189	LSC	0.298651	68	71	9	4	no	1.000000	3	1.000000	0.336452	0.915344	73.200000
psaL	gene	psaL	psaL	67047	67523	1	477	LSC	0.167016	114	0	1	0	no	1.000000	3	1.000000	0.167016	1.000000	76.200000
IGS_091	igs	psaL|cemA	psaL-cemA	67524	67589	0	66	LSC	0.439153	33	33	0	1	no	1.000000	3	1.000000	0.449037	0.954545	72.500000
cemA	gene	cemA	cemA	67590	68354	-1	765	LSC	0.140770	150	18	1	1	no	1.000000	3	1.000000	0.139778	0.984314	81.200000
IGS_092	igs	cemA|petF	cemA-petF	68355	68471	0	117	LSC	0.424501	70	7	6	0	no	1.000000	3	1.000000	0.424812	1.000000	78.100000
petF	gene	petF	petF	68472	68774	1	303	LSC	0.269729	105	23	0	0	no	1.000000	3	1.000000	0.266835	0.933993	76.500000
IGS_093	igs	petF|rps10	petF-rps10	68775	68813	0	39	LSC	0.243243	12	5	23	12	no	1.000000	3	1.000000	0.235559	0.948718	77.100000
rps10	gene	rps10	rps10	68814	69125	-1	312	LSC	0.199786	87	0	3	1	no	1.000000	3	1.000000	0.199786	1.000000	72.800000
IGS_094	igs	rps10|tufA	rps10-tufA	69126	69132	0	7	LSC	0.476190	5	0	14	0	no	1.000000	3	1.000000	NA	1.000000	72.500000
tufA	gene	tufA	tufA	69133	70359	-1	1227	LSC	0.133388	235	0	0	8	no	1.000000	3	1.000000	0.133388	1.000000	78.800000
IGS_095	igs	tufA|rps7	tufA-rps7	70360	70439	0	80	LSC	0.333333	37	16	5	6	no	1.000000	3	1.000000	0.351042	1.000000	77.000000
rps7	gene	rps7	rps7	70440	70907	-1	468	LSC	0.148148	98	0	3	1	no	1.000000	3	1.000000	0.148148	1.000000	76.100000
IGS_096	igs	rps7|rps12	rps7-rps12	70908	70918	0	11	LSC	0.272727	4	0	8	9	no	1.000000	3	1.000000	NA	1.000000	73.100000
rps12	gene	rps12	rps12	70919	71329	-1	411	LSC	0.151211	88	12	3	1	no	1.000000	3	1.000000	0.151211	0.970803	77.600000
IGS_097	igs	rps12|rpl31	rps12-rpl31	71330	71335	0	6	LSC	0.500000	3	1	11	3	no	1.000000	3	1.000000	NA	1.000000	77.200000
rpl31	gene	rpl31	rpl31	71336	71569	-1	234	LSC	0.170940	58	0	1	1	no	1.000000	3	1.000000	0.170940	1.000000	72.600000
IGS_098	igs	rpl31|rps9	rpl31-rps9	71570	71601	0	32	LSC	0.320513	9	28	12	18	no	1.000000	3	1.000000	NA	0.812500	71.100000
rps9	gene	rps9	rps9	71602	72003	-1	402	LSC	0.224710	125	4	0	1	no	1.000000	3	1.000000	0.223018	1.000000	75.800000
IGS_099	igs	rps9|rpl13	rps9-rpl13	72004	72050	0	47	LSC	0.367816	13	29	4	11	no	1.000000	3	1.000000	NA	0.617021	68.000000
rpl13	gene	rpl13	rpl13	72051	72530	-1	480	LSC	0.253868	165	40	1	1	no	1.000000	3	1.000000	0.254197	0.987500	81.400000
rpoA	gene	rpoA	rpoA	72527	73564	-1	1038	LSC	0.219502	250	259	4	1	no	1.000000	3	1.000000	0.213054	0.787091	77.600000
IGS_101	igs	rpoA|rps11	rpoA-rps11	73565	73579	0	15	LSC	0.355556	7	3	9	5	no	1.000000	3	1.000000	NA	1.000000	77.000000
rps11	gene	rps11	rps11	73580	73957	-1	378	LSC	0.157848	85	0	0	1	no	1.000000	3	1.000000	0.157848	1.000000	74.100000
IGS_102	igs	rps11|rps13	rps11-rps13	73958	73967	0	10	LSC	0.300000	4	0	3	6	no	1.000000	3	1.000000	NA	1.000000	72.700000
rps13	gene	rps13	rps13	73968	74333	-1	366	LSC	0.160291	84	0	1	23	no	1.000000	3	1.000000	0.160291	1.000000	73.900000
IGS_103	igs	rps13|rpl36	rps13-rpl36	74334	74347	0	14	LSC	0.000000	0	9	4	9	no	1.000000	3	1.000000	NA	0.500000	31.600000
rpl36	gene	rpl36	rpl36	74348	74461	-1	114	LSC	0.116959	20	0	18	1	no	1.000000	3	1.000000	0.116959	1.000000	72.600000
IGS_104	igs	rpl36|secY	rpl36-secY	74462	74479	0	18	LSC	0.444444	11	0	14	0	no	1.000000	3	1.000000	NA	1.000000	72.500000
secY	gene	secY	secY	74480	75748	-1	1269	LSC	0.279621	490	9	1	3	no	1.000000	3	1.000000	0.278464	0.997636	79.600000
rps5	gene	rps5	rps5	75735	76340	-1	606	LSC	0.197740	164	16	2	1	no	1.000000	3	1.000000	0.197740	0.973597	81.200000
IGS_106	igs	rps5|rpl18	rps5-rpl18	76341	76425	0	85	LSC	0.294118	35	8	2	6	no	1.000000	3	1.000000	0.295760	1.000000	77.900000
rpl18	gene	rpl18	rpl18	76426	76788	-1	363	LSC	0.209366	106	0	1	7	no	1.000000	3	1.000000	0.209366	1.000000	73.900000
IGS_107	igs	rpl18|rpl6	rpl18-rpl6	76789	76799	0	11	LSC	0.151515	2	8	17	6	no	1.000000	3	1.000000	NA	1.000000	73.000000
rpl6	gene	rpl6	rpl6	76800	77336	-1	537	LSC	0.234637	177	0	0	4	no	1.000000	3	1.000000	0.234637	1.000000	77.400000
IGS_108	igs	rpl6|rps8	rpl6-rps8	77337	77368	0	32	LSC	0.437500	16	22	8	3	no	1.000000	3	1.000000	NA	1.000000	72.700000
rps8	gene	rps8	rps8	77369	77776	-1	408	LSC	0.184641	106	0	0	1	no	1.000000	3	1.000000	0.184641	1.000000	74.800000
IGS_109	igs	rps8|rpl5	rps8-rpl5	77777	77848	0	72	LSC	0.357143	14	44	5	0	no	1.000000	3	1.000000	0.357143	0.388889	64.900000
rpl5	gene	rpl5	rpl5	77849	78394	-1	546	LSC	0.177045	136	0	0	0	no	1.000000	3	1.000000	0.177045	1.000000	77.600000
IGS_110	igs	rpl5|rpl24	rpl5-rpl24	78395	78400	0	6	LSC	0.388889	3	1	3	0	no	1.000000	3	1.000000	NA	1.000000	77.000000
rpl24	gene	rpl24	rpl24	78401	78730	-1	330	LSC	0.281818	133	2	0	2	no	1.000000	3	1.000000	0.278985	1.000000	73.800000
rpl14	gene	rpl14	rpl14	78727	79092	-1	366	LSC	0.144809	77	0	0	3	no	1.000000	3	1.000000	0.144809	1.000000	73.900000
IGS_112	igs	rpl14|rps17	rpl14-rps17	79093	79108	0	16	LSC	0.270833	5	9	5	3	no	1.000000	3	1.000000	NA	1.000000	73.100000
rps17	gene	rps17	rps17	79109	79357	-1	249	LSC	0.179384	66	2	3	1	no	1.000000	3	1.000000	0.180479	1.000000	73.500000
IGS_113	igs	rps17|rpl29	rps17-rpl29	79358	79370	0	13	LSC	0.111111	1	7	11	0	no	1.000000	3	1.000000	NA	0.461538	62.900000
rpl29	gene	rpl29	rpl29	79371	79580	-1	210	LSC	0.271132	79	4	11	6	no	1.000000	3	1.000000	0.274129	0.995238	75.000000
IGS_114	igs	rpl29|rpl16	rpl29-rpl16	79581	79584	0	4	LSC	NA	0	4	4	2	no	0.333333	2	0.500000	NA	0.000000	12.700000
rpl16	gene	rpl16	rpl16	79585	80004	-1	420	LSC	0.171451	100	5	8	0	no	1.000000	3	1.000000	0.167479	0.995238	76.300000
IGS_115	igs	rpl16|rps3	rpl16-rps3	80005	80025	0	21	LSC	0.476190	12	8	8	0	no	1.000000	3	1.000000	NA	1.000000	74.800000
rps3	gene	rps3	rps3	80026	80793	-1	768	LSC	0.213108	231	4	0	0	no	1.000000	3	1.000000	0.212069	1.000000	79.300000
IGS_116	igs	rps3|rpl22	rps3-rpl22	80794	80867	0	74	LSC	0.341085	20	41	0	2	no	1.000000	3	1.000000	0.326051	0.581081	67.300000
rpl22	gene	rpl22	rpl22	80868	81203	-1	336	LSC	0.208333	98	0	1	1	no	1.000000	3	1.000000	0.208333	1.000000	73.300000
IGS_117	igs	rpl22|rps19	rpl22-rps19	81204	81218	0	15	LSC	0.333333	7	0	0	6	no	1.000000	3	1.000000	NA	1.000000	72.500000
rps19	gene	rps19	rps19	81219	81497	-1	279	LSC	0.157706	65	0	1	1	no	1.000000	3	1.000000	0.157706	1.000000	72.600000
IGS_118	igs	rps19|rpl2	rps19-rpl2	81498	81528	0	31	LSC	0.408602	17	11	3	0	no	1.000000	3	1.000000	0.417204	1.000000	75.100000
rpl2	gene	rpl2	rpl2	81529	82353	-1	825	LSC	0.173737	206	0	0	1	no	1.000000	3	1.000000	0.173737	1.000000	78.800000
IGS_119	igs	rpl2|rpl23	rpl2-rpl23	82354	82379	0	26	LSC	0.478261	14	11	3	11	no	1.000000	3	1.000000	NA	0.884615	71.900000
rpl23	gene	rpl23	rpl23	82380	82673	-1	294	LSC	0.218821	91	0	1	0	no	1.000000	3	1.000000	0.218821	1.000000	72.500000
rpl4	gene	rpl4	rpl4	82666	83310	-1	645	LSC	0.274834	234	44	1	6	yes	1.000000	3	1.000000	0.273550	0.936434	82.900000
IGS_121	igs	rpl4|rpl3	rpl4-rpl3	83311	83326	0	16	LSC	0.307692	6	3	14	3	no	1.000000	3	1.000000	NA	0.812500	72.700000
rpl3	gene	rpl3	rpl3	83327	83956	-1	630	LSC	0.199471	178	0	0	9	no	1.000000	3	1.000000	0.199471	1.000000	78.800000
IGS_122	igs	rpl3|dnaK	rpl3-dnaK	83957	84117	0	161	LSC	0.337526	71	35	5	3	no	1.000000	3	1.000000	0.321264	0.987578	76.400000
dnaK	gene	dnaK	dnaK	84118	86031	1	1914	LSC	0.190003	514	11	1	1	no	1.000000	3	1.000000	0.190043	1.000000	78.600000
IGS_123	igs	dnaK|petM	dnaK-petM	86032	86472	0	441	IRb	0.347079	178	94	2	4	no	1.000000	3	1.000000	0.339099	0.879819	76.900000
petM	gene	petM	petM	86473	86571	-1	99	IRb	0.131313	19	0	0	1	no	1.000000	3	1.000000	0.131313	1.000000	72.500000
IGS_124	igs	petM|petN	petM-petN	86572	86863	0	292	IRb	0.397260	39	232	12	6	no	1.000000	3	1.000000	0.397108	0.250000	63.600000
petN	gene	petN	petN	86864	86956	-1	93	IRb	0.115942	15	1	0	1	no	1.000000	3	1.000000	0.115942	0.989247	73.500000
IGS_125	igs	petN|psaM	petN-psaM	86957	87165	0	209	IRb	0.373849	89	68	5	5	no	1.000000	3	1.000000	0.364001	0.866029	72.700000
psaM	gene	psaM	psaM	87166	87267	1	102	IRb	0.134831	17	13	2	7	no	1.000000	3	1.000000	0.134831	0.872549	74.700000
IGS_126	igs	psaM|chlI	psaM-chlI	87268	87462	0	195	IRb	0.392857	31	144	14	6	no	1.000000	3	1.000000	0.391223	0.287179	64.000000
chlI	gene	chlI	chlI	87463	88479	1	1017	IRb	0.170108	241	0	11	1	no	1.000000	3	1.000000	0.170108	1.000000	78.800000
IGS_127	igs	chlI|trnR(UCU)	chlI-trnR(UCU)	88480	88616	0	137	IRb	0.357143	5	136	8	1	no	1.000000	3	1.000000	NA	0.102190	53.400000
trnR(UCU)	tRNA	trnR(UCU)	trnR(UCU)	88617	88689	-1	73	IRb	0.082192	9	0	0	0	no	1.000000	3	1.000000	0.082192	1.000000	72.500000
IGS_128	igs	trnR(UCU)|trnV(UAC)	trnR(UCU)-trnV(UAC)	88690	88734	0	45	IRb	0.500000	23	36	1	5	no	1.000000	3	1.000000	NA	0.933333	71.700000
trnV(UAC)	tRNA	trnV(UAC)	trnV(UAC)	88735	88807	-1	73	IRb	0.101852	11	1	0	1	no	1.000000	3	1.000000	0.101852	0.986301	73.800000
IGS_129	igs	trnV(UAC)|petJ	trnV(UAC)-petJ	88808	88901	0	94	IRb	0.400966	35	45	0	10	no	1.000000	3	1.000000	0.410234	0.734043	69.200000
petJ	gene	petJ	petJ	88902	89183	-1	282	IRb	0.272283	101	15	1	0	no	1.000000	3	1.000000	0.271542	0.968085	77.500000
IGS_130	igs	petJ|psbC	petJ-psbC	89184	89412	0	229	IRb	0.432381	99	78	0	9	no	1.000000	3	1.000000	0.437179	0.764192	69.800000
psbC	gene	psbC	psbC	89413	90834	-1	1422	IRb	0.109705	227	0	0	1	no	1.000000	3	1.000000	0.109705	1.000000	78.800000
psbD	gene	psbD	psbD	90782	91843	-1	1062	IRb	0.111111	172	0	18	12	no	1.000000	3	1.000000	0.111111	1.000000	79.700000
IGS_132	igs	psbD|rns	psbD-rns	91844	93923	0	2080	IRb	0.415182	661	1271	6	3	yes	1.000000	3	1.000000	0.396709	0.620673	73.000000
rns	rRNA	rns	rns	93924	95398	1	1475	IRb	0.038723	82	8	7	0	no	1.000000	3	1.000000	0.037916	0.997966	68.700000
IGS_133	igs	rns|trnI	rns-trnI	95399	95467	0	69	IRb	0.264368	10	51	52	5	no	1.000000	3	1.000000	NA	0.420290	65.600000
trnI	tRNA	trnI	trnI	95468	95541	1	74	IRb	0.090090	10	0	14	0	no	1.000000	3	1.000000	0.090090	1.000000	72.500000
IGS_134	igs	trnI|trnA	trnI-trnA	95542	95554	0	13	IRb	0.444444	2	10	10	4	no	1.000000	3	1.000000	NA	0.230769	63.200000
trnA	tRNA	trnA	trnA	95555	95627	1	73	IRb	0.036530	4	0	11	0	no	1.000000	3	1.000000	0.036530	1.000000	60.800000
IGS_135	igs	trnA|rnl	trnA-rnl	95628	95710	0	83	IRb	0.237179	16	40	5	11	no	1.000000	3	1.000000	0.206901	0.626506	68.200000
rnl	rRNA	rnl	rnl	95711	98616	1	2906	IRb	0.053681	218	78	6	1	no	1.000000	3	1.000000	0.049152	0.989332	75.600000
IGS_136	igs	rnl|psaC	rnl-psaC	98617	99456	0	840	IRb	0.350664	210	704	2	58	yes	1.000000	3	1.000000	0.199171	0.686905	75.000000
psaC	gene	psaC	psaC	99457	99702	-1	246	IRb	0.357143	5	246	9	35	no	1.000000	3	1.000000	NA	0.056911	51.400000
IGS_137	igs	psaC|ccsA	psaC-ccsA	99703	99752	0	50	IRb	0.312500	5	50	178	0	no	1.000000	3	1.000000	NA	0.320000	64.000000
ccsA	gene	ccsA	ccsA	99753	100235	-1	483	IRb	0.216179	106	456	1	18	no	1.000000	3	1.000000	0.219278	0.989648	76.300000
IGS_138	igs	ccsA|psbA	ccsA-psbA	100236	100833	0	598	IRb	0.276451	176	500	17	34	no	1.000000	3	1.000000	0.313807	0.979933	79.700000
psbA	gene	psbA	psbA	100834	101892	1	1059	IRb	0.054505	85	2	7	13	no	1.000000	3	1.000000	0.054538	0.999056	77.000000
IGS_139	igs	psbA|trnN	psbA-trnN	101893	102055	0	163	IRb	0.285714	22	153	21	3	no	1.000000	3	1.000000	NA	0.429448	65.600000
trnN	tRNA	trnN	trnN	102056	102128	1	73	IRb	0.136986	14	55	1	0	no	1.000000	3	1.000000	NA	1.000000	72.500000
IGS_140	igs	trnN|ccs1	trnN-ccs1	102129	102734	0	606	IRb	0.423488	133	515	1	2	no	1.000000	3	1.000000	0.392619	0.463696	72.100000
ccs1	gene	ccs1	ccs1	102735	104105	-1	1371	IRb	0.218321	397	75	4	1	yes	1.000000	3	1.000000	0.217923	0.955507	83.500000
IGS_141	igs	ccs1|rpl34	ccs1-rpl34	104106	104184	0	79	IRb	0.413502	40	39	5	5	no	1.000000	3	1.000000	0.447785	1.000000	74.000000
rpl34	gene	rpl34	rpl34	104185	104325	-1	141	IRb	0.134752	28	1	0	0	no	1.000000	3	1.000000	0.135326	1.000000	73.300000
IGS_142	igs	rpl34|secA	rpl34-secA	104326	104381	0	56	IRb	0.231884	6	42	3	1	no	1.000000	3	1.000000	NA	0.410714	65.200000
secA	gene	secA	secA	104382	106979	-1	2598	IRb	0.234548	814	113	0	0	no	1.000000	3	1.000000	0.231308	0.971517	80.800000
IGS_143	igs	secA|rpl27	secA-rpl27	106980	107911	0	932	IRb	0.326614	396	119	0	2	yes	1.000000	3	1.000000	0.325666	0.958155	82.700000
rpl27	gene	rpl27	rpl27	107912	108169	-1	258	IRb	0.153747	54	4	2	4	no	1.000000	3	1.000000	0.150105	1.000000	74.400000
IGS_144	igs	rpl27|rpl21	rpl27-rpl21	108170	108226	0	57	IRb	0.342857	15	33	17	11	no	1.000000	3	1.000000	0.364286	0.614035	68.500000
rpl21	gene	rpl21	rpl21	108227	108541	-1	315	IRb	0.138158	59	11	22	1	no	1.000000	3	1.000000	0.138158	0.965079	76.100000
IGS_145	igs	rpl21|trnL(UAG)	rpl21-trnL(UAG)	108542	108676	0	135	IRb	0.360494	59	35	11	2	no	1.000000	3	1.000000	0.321728	1.000000	76.200000
trnL(UAG)	tRNA	trnL(UAG)	trnL(UAG)	108677	108758	-1	82	IRb	0.361789	43	0	0	0	no	1.000000	3	1.000000	0.361789	1.000000	72.500000
IGS_146	igs	trnL(UAG)|psbY	trnL(UAG)-psbY	108759	108879	0	121	IRb	0.380165	60	26	3	2	no	1.000000	3	1.000000	0.391881	1.000000	76.700000
psbY	gene	psbY	psbY	108880	108981	1	102	SSC	0.169935	25	0	0	7	no	1.000000	3	1.000000	0.169935	1.000000	72.500000
IGS_147	igs	psbY|ycf54	psbY-ycf54	108982	109043	0	62	SSC	0.225806	18	8	4	3	no	1.000000	3	1.000000	0.223417	1.000000	77.600000
ycf54	gene	ycf54	ycf54	109044	109787	-1	744	SSC	0.358175	340	171	4	0	yes	1.000000	3	1.000000	0.348369	0.991935	82.400000
IGS_148	igs	ycf54|trnL(UAG)	ycf54-trnL(UAG)	109788	110177	0	390	SSC	0.362637	167	141	0	3	no	1.000000	3	1.000000	0.348173	0.933333	75.300000
trnL(UAG)	tRNA	trnL(UAG)	trnL(UAG)	110178	110259	1	82	IRa	0.361789	43	0	0	2	no	1.000000	3	1.000000	0.361789	1.000000	72.500000
IGS_149	igs	trnL(UAG)|rpl21	trnL(UAG)-rpl21	110260	110394	0	135	IRa	0.387654	63	31	2	11	no	1.000000	3	1.000000	0.342403	1.000000	76.500000
rpl21	gene	rpl21	rpl21	110395	110709	1	315	IRa	0.150265	66	0	1	0	no	1.000000	3	1.000000	0.150265	1.000000	72.800000
IGS_150	igs	rpl21|rpl27	rpl21-rpl27	110710	110766	0	57	IRa	0.346154	11	44	3	17	no	1.000000	3	1.000000	NA	0.456140	65.900000
rpl27	gene	rpl27	rpl27	110767	111024	1	258	IRa	0.153747	54	4	4	2	no	1.000000	3	1.000000	0.150105	1.000000	74.400000
IGS_151	igs	rpl27|secA	rpl27-secA	111025	111956	0	932	IRa	0.325121	393	119	2	0	yes	1.000000	3	1.000000	0.324851	0.958155	82.700000
secA	gene	secA	secA	111957	114554	1	2598	IRa	0.235605	818	113	0	0	no	1.000000	3	1.000000	0.232368	0.971517	80.800000
IGS_152	igs	secA|rpl34	secA-rpl34	114555	114610	0	56	IRa	0.231884	6	42	1	3	no	1.000000	3	1.000000	NA	0.410714	65.200000
rpl34	gene	rpl34	rpl34	114611	114751	1	141	IRa	0.134752	28	0	0	0	no	1.000000	3	1.000000	0.134752	1.000000	72.500000
IGS_153	igs	rpl34|ccs1	rpl34-ccs1	114752	114830	0	79	IRa	0.400844	39	39	5	5	no	1.000000	3	1.000000	0.443565	1.000000	74.000000
ccs1	gene	ccs1	ccs1	114831	116201	1	1371	IRa	0.217557	396	75	1	4	yes	1.000000	3	1.000000	0.217668	0.955507	83.500000
IGS_154	igs	ccs1|trnN	ccs1-trnN	116202	116807	0	606	IRa	0.422301	133	515	2	1	yes	1.000000	3	1.000000	0.391433	0.463696	72.100000
trnN	tRNA	trnN	trnN	116808	116880	-1	73	IRa	0.138889	14	55	0	14	no	1.000000	3	1.000000	NA	0.986301	72.300000
IGS_155	igs	trnN|psbA	trnN-psbA	116881	117043	0	163	IRa	0.329457	30	155	3	21	no	1.000000	3	1.000000	NA	0.527607	66.800000
psbA	gene	psbA	psbA	117044	118102	-1	1059	IRa	0.054454	85	0	13	7	no	1.000000	3	1.000000	0.054454	1.000000	76.800000
IGS_156	igs	psbA|ccsA	psbA-ccsA	118103	118700	0	598	IRa	0.279478	180	500	34	17	no	1.000000	3	1.000000	0.320295	0.983278	79.800000
ccsA	gene	ccsA	ccsA	118701	119183	1	483	IRa	0.216179	106	456	18	1	no	1.000000	3	1.000000	0.219278	0.989648	76.300000
IGS_157	igs	ccsA|psaC	ccsA-psaC	119184	119233	0	50	IRa	0.312500	5	50	0	178	no	1.000000	3	1.000000	NA	0.320000	64.000000
psaC	gene	psaC	psaC	119234	119479	1	246	IRa	0.357143	5	246	35	9	no	1.000000	3	1.000000	NA	0.056911	51.400000
IGS_158	igs	psaC|rnl	psaC-rnl	119480	120319	0	840	IRa	0.350664	210	704	58	2	yes	1.000000	3	1.000000	0.199171	0.686905	75.000000
rnl	rRNA	rnl	rnl	120320	123225	-1	2906	IRa	0.054609	221	78	1	6	no	1.000000	3	1.000000	0.049621	0.989332	75.700000
IGS_159	igs	rnl|trnA	rnl-trnA	123226	123308	0	83	IRa	0.224359	15	40	11	5	no	1.000000	3	1.000000	0.207941	0.626506	68.200000
trnA	tRNA	trnA	trnA	123309	123381	-1	73	IRa	0.036530	4	0	0	11	no	1.000000	3	1.000000	0.036530	1.000000	60.800000
IGS_160	igs	trnA|trnI	trnA-trnI	123382	123394	0	13	IRa	0.444444	2	10	4	10	no	1.000000	3	1.000000	NA	0.230769	63.200000
trnI	tRNA	trnI	trnI	123395	123468	-1	74	IRa	0.090090	10	0	0	14	no	1.000000	3	1.000000	0.090090	1.000000	72.500000
IGS_161	igs	trnI|rns	trnI-rns	123469	123537	0	69	IRa	0.264368	10	51	5	52	no	1.000000	3	1.000000	NA	0.420290	65.600000
rns	rRNA	rns	rns	123538	125012	-1	1475	IRa	0.038723	82	8	0	7	no	1.000000	3	1.000000	0.037916	0.997966	68.700000
IGS_162	igs	rns|psbD	rns-psbD	125013	127092	0	2080	IRa	0.406162	650	1287	3	6	yes	1.000000	3	1.000000	0.394255	0.629327	73.100000
psbD	gene	psbD	psbD	127093	128154	1	1062	IRa	0.111111	172	0	12	18	no	1.000000	3	1.000000	0.111111	1.000000	79.700000
psbC	gene	psbC	psbC	128102	129523	1	1422	IRa	0.109705	227	0	1	0	no	1.000000	3	1.000000	0.109705	1.000000	78.800000
IGS_164	igs	psbC|petJ	psbC-petJ	129524	129752	0	229	IRa	0.432381	99	78	9	0	no	1.000000	3	1.000000	0.437179	0.764192	69.800000
petJ	gene	petJ	petJ	129753	130034	1	282	IRa	0.272283	101	15	0	1	no	1.000000	3	1.000000	0.271542	0.968085	77.500000
IGS_165	igs	petJ|trnV(UAC)	petJ-trnV(UAC)	130035	130128	0	94	IRa	0.422222	39	45	10	0	no	1.000000	3	1.000000	0.432381	0.797872	70.000000
trnV(UAC)	tRNA	trnV(UAC)	trnV(UAC)	130129	130201	1	73	IRa	0.101852	11	1	1	0	no	1.000000	3	1.000000	0.101852	0.986301	73.800000
IGS_166	igs	trnV(UAC)|trnR(UCU)	trnV(UAC)-trnR(UCU)	130202	130246	0	45	IRa	0.500000	23	36	5	1	no	1.000000	3	1.000000	NA	0.933333	71.700000
trnR(UCU)	tRNA	trnR(UCU)	trnR(UCU)	130247	130319	1	73	IRa	0.082192	9	0	0	0	no	1.000000	3	1.000000	0.082192	1.000000	72.500000
IGS_167	igs	trnR(UCU)|chlI	trnR(UCU)-chlI	130320	130456	0	137	IRa	0.357143	5	136	1	8	no	1.000000	3	1.000000	NA	0.102190	53.400000
chlI	gene	chlI	chlI	130457	131473	-1	1017	IRa	0.170108	241	0	1	11	no	1.000000	3	1.000000	0.170108	1.000000	78.800000
IGS_168	igs	chlI|psaM	chlI-psaM	131474	131668	0	195	IRa	0.392857	31	144	6	14	no	1.000000	3	1.000000	0.391223	0.287179	64.000000
psaM	gene	psaM	psaM	131669	131770	-1	102	IRa	0.134831	17	13	7	3	no	1.000000	3	1.000000	0.134831	0.872549	74.700000
IGS_169	igs	psaM|petN	psaM-petN	131771	131979	0	209	IRa	0.385185	91	69	5	5	no	1.000000	3	1.000000	0.372487	0.861244	72.500000
petN	gene	petN	petN	131980	132072	1	93	IRa	0.114695	15	0	1	0	no	1.000000	3	1.000000	0.114695	1.000000	72.500000
IGS_170	igs	petN|petM	petN-petM	132073	132364	0	292	IRa	0.397260	39	232	6	12	no	1.000000	3	1.000000	0.397108	0.250000	63.600000
petM	gene	petM	petM	132365	132463	1	99	IRa	0.131313	19	1	1	2	no	1.000000	3	1.000000	0.132275	1.000000	73.700000
IGS_171	igs	petM|trnM	petM-trnM	132464	189	0	785	IRa	0.350522	256	276	4	300	no	1.000000	3	1.000000	0.342378	0.691720	75.200000