primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score ycf21_p1 ycf21 1 ACCCAATGACATGAATGGTA CGTCAGATAAGAATTGAATTTTCT 20 24 40.0 29.2 54.3 53.7 0.0 0.0 11.977104 54326 54850 740-740 0.500000 20.0 ycf21_p2 ycf21 2 TACCCAATGACATGAATGGT CGTCAGATAAGAATTGAATTTTCT 20 24 40.0 29.2 54.3 53.7 0.0 0.0 11.977104 54326 54850 741-741 0.500000 20.0 ycf21_p3 ycf21 3 ACCCAATGACATGAATGGTA CGTCAGATAAGAATTGAATTTTCTTCT 20 27 40.0 29.6 54.3 56.7 0.0 6.8 11.984748 54326 54850 740-740 0.500000 20.0 ycf21_p4 ycf21 4 TACCCAATGACATGAATGGT CGTCAGATAAGAATTGAATTTTCTTCT 20 27 40.0 29.6 54.3 56.7 0.0 6.8 11.984748 54326 54850 741-741 0.500000 20.0 ycf21_p5 ycf21 5 ACCCAATGACATGAATGGTA CGTCAGATAAGAATTGAATTTTCTTC 20 26 40.0 30.8 54.3 55.5 0.0 6.8 12.180541 54326 54850 740-740 0.500000 20.0 ycf60_p1 ycf60 1 GCAGCTCCTAAACGAATTGC TGCCACTGATTGAGCTCTTC 20 20 50.0 50.0 57.8 57.9 0.0 16.2 0.284955 66642 67259 1589-1589 0.500000 57.7 ycf60_p2 ycf60 2 GCAGCTCCTAAACGAATTGC GCAGCGCAACCAATATCTTC 20 20 50.0 50.0 57.8 57.9 0.0 11.5 0.290990 66642 67259 1906-1906 0.500000 57.7 ycf60_p3 ycf60 3 GCAGCTCCTAAACGAATTGC TAACAGCAGCGCAACCAATA 20 20 50.0 45.0 57.8 58.2 0.0 11.5 0.365156 66642 67259 1911-1911 0.500000 57.1 ycf60_p4 ycf60 4 GCAGCTCCTAAACGAATTGC AGCAGCGCAACCAATATCTT 20 20 50.0 45.0 57.8 58.2 0.0 11.5 0.424769 66642 67259 1907-1907 0.500000 56.6 ycf60_p5 ycf60 5 GCAGCTCCTAAACGAATTGC TCAGCATTTTTGCATCCAGC 20 20 50.0 45.0 57.8 57.6 0.0 0.3 0.553489 66642 67259 1675-1675 0.500000 55.6 ccdA_p1 ccdA 1 AAATTTCCACTGACGTGCAC AGGATAGGCGAGGGTACTTC 20 20 45.0 55.0 57.2 58.0 6.8 0.0 0.776216 70154 70885 1669-1941 1.000000 82.2 ccdA_p2 ccdA 2 AAATTTCCACTGACGTGCAC GGTTCAAATCCTTCCTGGGG 20 20 45.0 55.0 57.2 58.1 6.8 0.0 0.921806 70154 70885 1150-1153 1.000000 81.0 ccdA_p3 ccdA 3 AAATTTCCACTGACGTGCAC TACCAATTTCACCACGTCCG 20 20 45.0 50.0 57.2 58.2 6.8 0.0 0.976155 70154 70885 1486-1758 1.000000 80.6 ccdA_p4 ccdA 4 AAATTTCCACTGACGTGCAC ACGCCAAACCATCCAATGTA 20 20 45.0 45.0 57.2 57.8 6.8 0.0 0.982571 70154 70885 1788-2062 1.000000 80.5 ccdA_p5 ccdA 5 AAATTTCCACTGACGTGCAC TACGCCAAACCATCCAATGT 20 20 45.0 45.0 57.2 57.8 6.8 0.0 0.982571 70154 70885 1789-2063 1.000000 80.5 ycf56_p1 ycf56 1 ATAGTTTCTCCTGGCTGTGC CAGCTGGTTCATGGGCTTTA 20 20 50.0 50.0 57.6 58.2 0.0 5.6 0.571836 74882 75571 1315-1315 0.500000 55.4 ycf56_p2 ycf56 2 ATAGTTTCTCCTGGCTGTGC GTTTTGGCAGCTGGTTCATG 20 20 50.0 50.0 57.6 58.2 0.0 17.1 0.622936 74882 75571 1322-1322 0.500000 55.0 ycf56_p3 ycf56 3 CCTGGCTGTGCATGTACTTT CAGCTGGTTCATGGGCTTTA 20 20 50.0 50.0 58.5 58.2 15.2 5.6 0.623840 74882 75571 1306-1306 0.500000 55.0 ycf56_p4 ycf56 4 CCTGGCTGTGCATGTACTTT GTTTTGGCAGCTGGTTCATG 20 20 50.0 50.0 58.5 58.2 15.2 17.1 0.674940 74882 75571 1313-1313 0.500000 54.6 ycf56_p5 ycf56 5 ACCAACATTCATGCCTGGAT CAGCTGGTTCATGGGCTTTA 20 20 45.0 50.0 57.5 58.2 13.2 5.6 0.699521 74882 75571 1690-1690 0.500000 54.4 ycf37_p1 ycf37 1 TCGGGATATAGCGCAGTTTG AATCCTCTTGAAGCTCGTGG 20 20 50.0 50.0 57.9 57.6 11.5 0.0 0.542187 86323 86826 1306-1466 1.000000 85.8 ycf37_p2 ycf37 2 GTCGGGATATAGCGCAGTTT AATCCTCTTGAAGCTCGTGG 20 20 50.0 50.0 57.8 57.6 11.5 0.0 0.543669 86323 86826 1307-1307 0.500000 55.7 ycf37_p3 ycf37 3 TACTGTCGGTTGGGTACGTA AATCCTCTTGAAGCTCGTGG 20 20 50.0 50.0 57.8 57.6 0.0 0.0 0.585935 86323 86826 1715-1715 0.500000 55.3 ycf37_p4 ycf37 4 TCGGGATATAGCGCAGTTTG ATCCTCTTGAAGCTCGTGGA 20 20 50.0 50.0 57.9 58.4 11.5 0.0 0.587273 86323 86826 1305-1305 0.500000 55.3 ycf37_p5 ycf37 5 GTCGGGATATAGCGCAGTTT ATCCTCTTGAAGCTCGTGGA 20 20 50.0 50.0 57.8 58.4 11.5 0.0 0.588754 86323 86826 1306-1306 0.500000 55.3 ycf37-chlN_p1 ycf37-chlN 1 TCGGGATATAGCGCAGTTTG TGATGCGCAGGAGAAAAACT 20 20 50.0 45.0 57.9 58.1 11.5 18.3 0.252696 86827 87410 1746-1746 0.500000 58.0 ycf37-chlN_p2 ycf37-chlN 2 GTCGGGATATAGCGCAGTTT TGATGCGCAGGAGAAAAACT 20 20 50.0 45.0 57.8 58.1 11.5 18.3 0.254178 86827 87410 1747-1747 0.500000 58.0 ycf37-chlN_p3 ycf37-chlN 3 TCGGGATATAGCGCAGTTTG TACAACATTGATGCGCAGGA 20 20 50.0 45.0 57.9 57.9 11.5 18.3 0.255393 86827 87410 1754-1754 0.500000 58.0 ycf37-chlN_p4 ycf37-chlN 4 GTCGGGATATAGCGCAGTTT TACAACATTGATGCGCAGGA 20 20 50.0 45.0 57.8 57.9 11.5 18.3 0.256874 86827 87410 1755-1755 0.500000 57.9 ycf37-chlN_p5 ycf37-chlN 5 TCGGGATATAGCGCAGTTTG ACATTGATGCGCAGGAGAAA 20 20 50.0 45.0 57.9 58.2 11.5 18.3 0.323825 86827 87410 1750-1750 0.500000 57.4 upp_p1 upp 1 ACAGCCATGGCAAGAAAGAA GCTCGTCCATCTCTTCGTTT 20 20 45.0 50.0 58.0 58.0 37.2 0.0 0.002683 98652 99251 1798-1798 0.500000 60.0 upp_p2 upp 2 ATGAGATCACCTAGTGGCGA GCTCGTCCATCTCTTCGTTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.075583 98652 99251 1926-1926 0.500000 59.4 upp_p3 upp 3 TCCATTGGTTACGCAAGCTT GCTCGTCCATCTCTTCGTTT 20 20 45.0 50.0 58.1 58.0 1.9 0.0 0.098044 98652 99251 1271-1271 0.500000 59.2 upp_p4 upp 4 CTGCTGGCTTTGAGAAAGGA GCTCGTCCATCTCTTCGTTT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.100740 98652 99251 1595-1595 0.500000 59.2 upp_p5 upp 5 ATCCATTGGTTACGCAAGCT GCTCGTCCATCTCTTCGTTT 20 20 45.0 50.0 57.9 58.0 1.9 0.0 0.131101 98652 99251 1272-1272 0.500000 59.0 orf160_p1 orf160 1 AAACGAAGAGATGGACGAGC TTGTTCCAGGTGGAGGATCT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.047124 100379 100876 1437-1437 0.500000 59.6 orf160_p2 orf160 2 AAACGAAGAGATGGACGAGC GTTCCAGGTGGAGGATCTCT 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.129558 100379 100876 1435-1435 0.500000 59.0 orf160_p3 orf160 3 AAACGAAGAGATGGACGAGC ATGTTGGGTACAGCAAGACG 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.193920 100379 100876 1720-1720 0.500000 58.4 orf160_p4 orf160 4 CGAAGAGATGGACGAGCAAT TTGTTCCAGGTGGAGGATCT 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.260700 100379 100876 1434-1434 0.500000 57.9 orf160_p5 orf160 5 AAACGAAGAGATGGACGAGC TGATCCCGCGAAAGTAACTC 20 20 50.0 50.0 58.0 57.7 0.0 8.2 0.291292 100379 100876 1181-1181 0.500000 57.7 hisS_p1 hisS 1 TTTTAATGCGGCCTGTCGTA ATCCATAAACTGGGGTGGGA 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.101821 102781 104040 1938-1938 0.500000 59.2 hisS_p2 hisS 2 TTAATGCGGCCTGTCGTATC ATCCATAAACTGGGGTGGGA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.144925 102781 104040 1936-1936 0.500000 58.8 hisS_p3 hisS 3 TTTTAATGCGGCCTGTCGTA TAAACTGGGGTGGGAGGATT 20 20 45.0 50.0 57.9 57.9 0.0 0.0 0.165051 102781 104040 1933-1933 0.500000 58.7 hisS_p4 hisS 4 TTTTAATGCGGCCTGTCGTA CTTTGGGCTGACCGTTGATA 20 20 45.0 50.0 57.9 57.9 0.0 0.0 0.204170 102781 104040 2285-2285 0.500000 58.4 hisS_p5 hisS 5 TTTTAATGCGGCCTGTCGTA CTTACCACTTGGCTACACCC 20 20 45.0 55.0 57.9 57.9 0.0 0.0 0.205645 102781 104040 1879-1879 0.500000 58.4 syfB_p1 syfB 1 AATCCTCCCACCCCAGTTTA AGTAAGGGTGCAAAGGTGTG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.087575 104709 106703 2750-2802 1.000000 87.7 syfB_p2 syfB 2 AATCCTCCCACCCCAGTTTA GGTGCAAAGGTGTGGTAAGA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.093172 104709 106703 2744-2796 1.000000 87.7 syfB_p3 syfB 3 GGGTGTAGCCAAGTGGTAAG AGTAAGGGTGCAAAGGTGTG 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.128168 104709 106703 2804-2856 1.000000 87.4 syfB_p4 syfB 4 GGTGTAGCCAAGTGGTAAGG AGTAAGGGTGCAAAGGTGTG 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.128168 104709 106703 2803-2855 1.000000 87.4 syfB_p5 syfB 5 TATCAACGGTCAGCCCAAAG AGTAAGGGTGCAAAGGTGTG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.126693 104709 106703 2398-2398 0.500000 59.0 ycf29_p1 ycf29 1 ATTATTCGCGGGTTCGAGTC GTTTTTGTGATTGCGGTTGC 20 20 50.0 45.0 58.2 57.4 6.1 0.0 0.794778 108268 108918 966-966 0.500000 53.6 ycf29_p2 ycf29 2 ATTATTCGCGGGTTCGAGTC TTGTAACATTCACGCGTTGG 20 20 50.0 45.0 58.2 57.3 6.1 10.2 0.823091 108268 108918 1226-1226 0.500000 53.4 ycf29_p3 ycf29 3 CAAGGGGTTAAGGCAATGGA GTTTTTGTGATTGCGGTTGC 20 20 50.0 45.0 57.8 57.4 0.0 0.0 0.874004 108268 108918 996-996 0.500000 53.0 ycf29_p4 ycf29 4 CAAGGGGTTAAGGCAATGGA TTGTAACATTCACGCGTTGG 20 20 50.0 45.0 57.8 57.3 0.0 10.2 0.902317 108268 108918 1256-1256 0.500000 52.8 ycf29_p5 ycf29 5 GCTAACCTCAACCTCCTCCT GTTTTTGTGATTGCGGTTGC 20 20 55.0 45.0 58.4 57.4 0.0 0.0 1.069612 108268 108918 1318-1318 0.500000 51.4 rps5_p1 rps5 1 TGAAAATCCACCGCCAGAAA GTTGGAGAAGACATTGGCCA 20 20 45.0 50.0 58.0 58.1 0.0 0.0 0.102007 136505 137056 891-891 0.500000 59.2 rps5_p2 rps5 2 TTGAAAATCCACCGCCAGAA GTTGGAGAAGACATTGGCCA 20 20 45.0 50.0 58.0 58.1 0.0 0.0 0.102007 136505 137056 892-892 0.500000 59.2 rps5_p3 rps5 3 TGAAAATCCACCGCCAGAAA AGTTGGAGAAGACATTGGCC 20 20 45.0 50.0 58.0 57.8 0.0 0.0 0.218283 136505 137056 892-892 0.500000 58.3 rps5_p4 rps5 4 TTGAAAATCCACCGCCAGAA AGTTGGAGAAGACATTGGCC 20 20 45.0 50.0 58.0 57.8 0.0 0.0 0.218283 136505 137056 893-893 0.500000 58.3 rps5_p5 rps5 5 TGAAAATCCACCGCCAGAAA GGCAAAGGTATACGCTACGA 20 20 45.0 50.0 58.0 57.5 0.0 0.0 0.508813 136505 137056 1140-1140 0.500000 55.9 accB-ycf45_p1 accB-ycf45 1 TCGCATTAGAGCTTGTCCAC CTTGCATACGCCTTGCTCTA 20 20 50.0 50.0 58.0 58.1 0.0 6.4 0.070171 152898 153305 1396-1402 1.000000 88.8 accB-ycf45_p2 accB-ycf45 2 AATGACCAGGTTTTGCCCAT CTTGCATACGCCTTGCTCTA 20 20 45.0 50.0 58.0 58.1 0.0 6.4 0.088587 152898 153305 1690-1690 0.500000 59.3 accB-ycf45_p3 accB-ycf45 3 ATGACCAGGTTTTGCCCATT CTTGCATACGCCTTGCTCTA 20 20 45.0 50.0 58.0 58.1 0.0 6.4 0.088587 152898 153305 1689-1689 0.500000 59.3 accB-ycf45_p4 accB-ycf45 4 TCGCATTAGAGCTTGTCCAC TGGAAAACGAGCTTCTGGTC 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.131192 152898 153305 996-996 0.500000 59.0 accB-ycf45_p5 accB-ycf45 5 ATGACCAGGTTTTGCCCATT TGGAAAACGAGCTTCTGGTC 20 20 45.0 50.0 58.0 58.1 0.0 0.0 0.149608 152898 153305 1283-1283 0.500000 58.8 chlB_p1 chlB 1 TGCAGTTACAATGTTGGAGACA TCTTGAGAACCCCTAGCCAA 22 20 40.9 50.0 58.2 58.0 0.0 0.0 2.224238 157665 157784 777-777 0.500000 42.2 chlB_p2 chlB 2 TGCAGTTACAATGTTGGAGACA TTCTTGAGAACCCCTAGCCA 22 20 40.9 50.0 58.2 58.0 0.0 0.0 2.224238 157665 157784 778-778 0.500000 42.2 chlB_p3 chlB 3 TGCAGTTACAATGTTGGAGACA TCGGCTTCAAAACCATACGT 22 20 40.9 45.0 58.2 57.8 0.0 0.0 2.358226 157665 157784 650-650 0.500000 41.1 chlB_p4 chlB 4 TGCAGTTACAATGTTGGAGACA CGGCTTCAAAACCATACGTG 22 20 40.9 50.0 58.2 57.8 0.0 0.0 2.426634 157665 157784 649-649 0.500000 40.6 chlB_p5 chlB 5 TGCAGTTACAATGTTGGAGACA AACCCCTAGCCAATACATGC 22 20 40.9 50.0 58.2 57.6 0.0 0.0 2.550347 157665 157784 770-770 0.500000 39.6 orf456_p1 orf456 1 GGCCCAGCTCATATTGGTAC TCTTGAGAACCCCTAGCCAA 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.141303 156791 158155 2210-2210 0.500000 58.9 orf456_p2 orf456 2 GGCCCAGCTCATATTGGTAC TTCTTGAGAACCCCTAGCCA 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.141303 156791 158155 2211-2211 0.500000 58.9 orf456_p3 orf456 3 GGCCCAGCTCATATTGGTAC AACCCTCCAACCTCACGATA 20 20 55.0 50.0 58.1 58.1 0.0 0.0 0.155456 156791 158155 2681-2681 0.500000 58.8 orf456_p4 orf456 4 GGCCCAGCTCATATTGGTAC ACCCTCCAACCTCACGATAA 20 20 55.0 50.0 58.1 58.1 0.0 0.0 0.155456 156791 158155 2680-2680 0.500000 58.8 orf456_p5 orf456 5 ATGCACCACTAGGGGATGAT TCTTGAGAACCCCTAGCCAA 20 20 50.0 50.0 58.2 58.0 20.8 0.0 0.213758 156791 158155 2146-2146 0.500000 58.3 acsF-petN_p1 acsF-petN 1 TGCAGTGCATGATCTTTCCA AGACTGATTGCCCATTCCAC 20 20 45.0 50.0 57.8 57.9 15.4 0.0 0.338259 160811 161262 1139-1139 0.500000 57.3 acsF-petN_p2 acsF-petN 2 TGCAGTGCATGATCTTTCCA AGAGCCCCATCCTAAACTGA 20 20 45.0 50.0 57.8 57.7 15.4 0.0 0.473904 160811 161262 746-746 0.500000 56.2 acsF-petN_p3 acsF-petN 3 AAGCCCGAAAATTCTGCAGT AGACTGATTGCCCATTCCAC 20 20 45.0 50.0 58.4 57.9 14.7 0.0 0.513967 160811 161262 1153-1153 0.500000 55.9 acsF-petN_p4 acsF-petN 4 TGCAGTGCATGATCTTTCCA AGCCCCATCCTAAACTGACA 20 20 45.0 50.0 57.8 58.3 15.4 0.0 0.534644 160811 161262 744-744 0.500000 55.7 acsF-petN_p5 acsF-petN 5 TGCAGTGCATGATCTTTCCA GAGCCCCATCCTAAACTGAC 20 20 45.0 55.0 57.8 57.7 15.4 0.0 0.537159 160811 161262 745-745 0.500000 55.7