primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score orf490_p1 orf490 1 GGGGACCGATCTAAGGAAGA TGTTCAAAGGCCTCTTGGTC 20 20 55.0 50.0 57.9 58.0 0.0 20.5 0.102372 102 1574 1973-1973 0.500000 59.2 orf490_p2 orf490 2 GGGGACCGATCTAAGGAAGA GGCCTCTTGGTCTATTGCTC 20 20 55.0 55.0 57.9 58.0 0.0 0.0 0.123212 102 1574 1965-1965 0.500000 59.0 orf490_p3 orf490 3 GTGTTTCCTTCTTTGCAGGC TGTTCAAAGGCCTCTTGGTC 20 20 50.0 50.0 57.9 58.0 0.0 20.5 0.158808 102 1574 1953-1953 0.500000 58.7 orf490_p4 orf490 4 GGGGACCGATCTAAGGAAGA GGGCTTGTCGAACATACTGT 20 20 55.0 50.0 57.9 57.9 0.0 0.0 0.178390 102 1574 1851-1851 0.500000 58.6 orf490_p5 orf490 5 GTGTTTCCTTCTTTGCAGGC GGCCTCTTGGTCTATTGCTC 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.179648 102 1574 1945-1945 0.500000 58.6 orf490-accD_p1 orf490-accD 1 CATACCGGTCAGTCACAAGG CCATGCTGCCTCCCATAAAT 20 20 55.0 50.0 58.0 58.0 12.4 0.0 0.015515 1575 3518 2900-2900 0.500000 59.9 orf490-accD_p2 orf490-accD 2 CACCTGATCGATGAACTGCA CCATGCTGCCTCCCATAAAT 20 20 50.0 50.0 58.0 58.0 0.5 0.0 0.019706 1575 3518 2701-2701 0.500000 59.8 orf490-accD_p3 orf490-accD 3 TGCACCTGATCGATGAACTG CCATGCTGCCTCCCATAAAT 20 20 50.0 50.0 58.0 58.0 0.5 0.0 0.019706 1575 3518 2703-2703 0.500000 59.8 orf490-accD_p4 orf490-accD 4 ACCTGATCGATGAACTGCAC CCATGCTGCCTCCCATAAAT 20 20 50.0 50.0 58.0 58.0 0.5 0.0 0.021106 1575 3518 2700-2700 0.500000 59.8 orf490-accD_p5 orf490-accD 5 AGCCAGACTCAACCAGTAGT CCATGCTGCCTCCCATAAAT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.022275 1575 3518 2419-2419 0.500000 59.8 ycf12-trnL(uaa)_p1 ycf12-trnL(uaa) 1 GTTCTGTCAGGTCCCCTAGT TTGAGACATAGGTTCGCACG 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.069221 6264 8209 2092-2092 0.500000 59.4 ycf12-trnL(uaa)_p2 ycf12-trnL(uaa) 2 TTCTGTCAGGTCCCCTAGTG TTGAGACATAGGTTCGCACG 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.070616 6264 8209 2091-2091 0.500000 59.4 ycf12-trnL(uaa)_p3 ycf12-trnL(uaa) 3 TGCACTCATCGTTCTGTCAG TTGAGACATAGGTTCGCACG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.079463 6264 8209 2102-2102 0.500000 59.4 ycf12-trnL(uaa)_p4 ycf12-trnL(uaa) 4 AGCTAGCTGTTCTTGCACTC TTGAGACATAGGTTCGCACG 20 20 50.0 50.0 57.9 58.0 18.6 0.0 0.101053 6264 8209 2115-2115 0.500000 59.2 ycf12-trnL(uaa)_p5 ycf12-trnL(uaa) 5 CTAGTGATAGCCCTGCTTGC TTGAGACATAGGTTCGCACG 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.132879 6264 8209 2077-2077 0.500000 58.9 chlI-psbC_p1 chlI-psbC 1 GGTGCAAGAGAAGTTTAGCC GCAGGTTTTGAGAAGGGGAT 20 20 50.0 50.0 56.7 57.8 0.0 0.0 1.505746 13605 15572 2080-2080 0.500000 48.0 chlI-psbC_p2 chlI-psbC 2 GGTGCAAGAGAAGTTTAGCCA GCAGGTTTTGAGAAGGGGAT 21 20 47.6 50.0 58.5 57.8 0.0 0.0 1.717860 13605 15572 2080-2080 0.500000 46.3 chlI-psbC_p3 chlI-psbC 3 TGGTGCAAGAGAAGTTTAGCC GCAGGTTTTGAGAAGGGGAT 21 20 47.6 50.0 58.5 57.8 0.0 0.0 1.717860 13605 15572 2081-2081 0.500000 46.3 chlI-psbC_p4 chlI-psbC 4 GGTGCAAGAGAAGTTTAGCC GACACCGAACCCGTACTTTC 20 20 50.0 55.0 56.7 58.6 0.0 0.0 1.861131 13605 15572 2053-2053 0.500000 45.1 chlI-psbC_p5 chlI-psbC 5 GGTGCAAGAGAAGTTTAGCC AACCCGTACTTTCTATGGGC 20 20 50.0 50.0 56.7 57.3 0.0 4.8 1.987983 13605 15572 2046-2046 0.500000 44.1 trnV(uac)-trnMe(cau)_p1 trnV(uac)-trnMe(cau) 1 GAGCTAGAAGGCCACAGAAC TGAACCAATGACTTTCGCCT 20 20 55.0 45.0 58.0 57.7 5.0 0.0 0.287490 40783 41458 831-843 1.000000 81.5 trnV(uac)-trnMe(cau)_p2 trnV(uac)-trnMe(cau) 2 GGGCTATACGGATTCGAACC TGAACCAATGACTTTCGCCT 20 20 55.0 45.0 57.9 57.7 0.0 0.0 0.346331 40783 41458 803-815 1.000000 81.2 trnV(uac)-trnMe(cau)_p3 trnV(uac)-trnMe(cau) 3 ATGAGCTAGAAGGCCACAGA TGAACCAATGACTTTCGCCT 20 20 50.0 45.0 58.1 57.7 5.0 0.0 0.398934 40783 41458 833-845 1.000000 80.6 trnV(uac)-trnMe(cau)_p4 trnV(uac)-trnMe(cau) 4 CGAACCGTAGACAATCTCGG TGAACCAATGACTTTCGCCT 20 20 55.0 45.0 58.2 57.7 12.3 0.0 0.446524 40783 41458 789-801 1.000000 80.5 trnV(uac)-trnMe(cau)_p5 trnV(uac)-trnMe(cau) 5 AAGGCCACAGAACAAGGTTT TGAACCAATGACTTTCGCCT 20 20 45.0 45.0 57.8 57.7 5.0 0.0 0.429531 40783 41458 824-836 1.000000 80.4 trnQ(uug)-chlB_p1 trnQ(uug)-chlB 1 AGCGGTAAAACACGTGACTT GTCTCCTAAAGGTGCATGCA 20 20 45.0 50.0 58.1 57.9 25.0 18.5 0.169829 73389 73722 472-500 1.000000 86.8 trnQ(uug)-chlB_p2 trnQ(uug)-chlB 2 AAGCGGTAAAACACGTGACT GTCTCCTAAAGGTGCATGCA 20 20 45.0 50.0 58.1 57.9 25.0 18.5 0.169829 73389 73722 473-501 1.000000 86.7 trnQ(uug)-chlB_p3 trnQ(uug)-chlB 3 GACTCATGCGTAGGAGGTTC GTCTCCTAAAGGTGCATGCA 20 20 55.0 50.0 57.8 57.9 19.1 18.5 0.325213 73389 73722 451-479 1.000000 85.7 trnQ(uug)-chlB_p4 trnQ(uug)-chlB 4 AAGCGGTAAAACACGTGACT AGTCGTCTCCTAAAGGTGCA 20 20 45.0 50.0 58.1 58.4 25.0 0.0 0.426926 73389 73722 477-505 1.000000 84.7 trnQ(uug)-chlB_p5 trnQ(uug)-chlB 5 AGCGGTAAAACACGTGACTT AGTCGTCTCCTAAAGGTGCA 20 20 45.0 50.0 58.1 58.4 25.0 0.0 0.426926 73389 73722 476-504 1.000000 84.7 rpl19-trnF(gaa)_p1 rpl19-trnF(gaa) 1 AAGTGGGGCTTGCATAAACA GGCAAACACTCGCACTTTAC 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.040657 94319 94438 1075-1075 0.500000 59.7 rpl19-trnF(gaa)_p2 rpl19-trnF(gaa) 2 AGTGGGGCTTGCATAAACAA GGCAAACACTCGCACTTTAC 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.040657 94319 94438 1074-1074 0.500000 59.7 rpl19-trnF(gaa)_p3 rpl19-trnF(gaa) 3 AAGTGGGGCTTGCATAAACA CTTCCTGCTGCTATTGCTCA 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.042347 94319 94438 1112-1112 0.500000 59.7 rpl19-trnF(gaa)_p4 rpl19-trnF(gaa) 4 AGTGGGGCTTGCATAAACAA CTTCCTGCTGCTATTGCTCA 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.042347 94319 94438 1111-1111 0.500000 59.7 rpl19-trnF(gaa)_p5 rpl19-trnF(gaa) 5 GAGCGCATCCGATATCCAAT GGCAAACACTCGCACTTTAC 20 20 50.0 50.0 58.0 58.0 11.5 0.0 0.048150 94319 94438 928-928 0.500000 59.6 orf340_p1 orf340 1 ATTGCTCGTAGGCTGTTCTG AGCGTACCGACAACTTCATC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.023566 98436 99458 1785-1785 0.500000 59.8 orf340_p2 orf340 2 CATTGCTCGTAGGCTGTTCT AGCGTACCGACAACTTCATC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.023566 98436 99458 1786-1786 0.500000 59.8 orf340_p3 orf340 3 ATTGCTCGTAGGCTGTTCTG GGCTTGCGACTCACAATCTA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.025881 98436 99458 2022-2022 0.500000 59.8 orf340_p4 orf340 4 CATTGCTCGTAGGCTGTTCT GGCTTGCGACTCACAATCTA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.025881 98436 99458 2023-2023 0.500000 59.8 orf340_p5 orf340 5 CCAAGCTCCCTCATACACAC AGCGTACCGACAACTTCATC 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.037669 98436 99458 1909-1909 0.500000 59.7 orf340-trnI(gau)_p1 orf340-trnI(gau) 1 GCAATTGAGAGCGAAGGAGA TTGAAGCCTACGTCATGCTC 20 20 50.0 50.0 58.0 58.0 10.3 6.8 0.025881 99459 100289 1842-1842 0.500000 59.8 orf340-trnI(gau)_p2 orf340-trnI(gau) 2 CTCAGCTTCGTAGTCGCTTT TTGAAGCCTACGTCATGCTC 20 20 50.0 50.0 58.0 58.0 0.0 6.8 0.026173 99459 100289 1523-1523 0.500000 59.8 orf340-trnI(gau)_p3 orf340-trnI(gau) 3 CGAGATGCTGTTCGTGAAGA TTGAAGCCTACGTCATGCTC 20 20 50.0 50.0 58.0 58.0 0.0 6.8 0.027533 99459 100289 1749-1749 0.500000 59.8 orf340-trnI(gau)_p4 orf340-trnI(gau) 4 GCAATTGAGAGCGAAGGAGA AAGCCTACGTCATGCTCTTG 20 20 50.0 50.0 58.0 58.0 10.3 6.8 0.031472 99459 100289 1839-1839 0.500000 59.7 orf340-trnI(gau)_p5 orf340-trnI(gau) 5 GCAATTGAGAGCGAAGGAGA CTTGAAGCCTACGTCATGCT 20 20 50.0 50.0 58.0 58.0 10.3 0.0 0.031472 99459 100289 1843-1843 0.500000 59.7 ndhB-minD_p1 ndhB-minD 1 CACTCTCGTTCGTAGTCTGC ATCTTCTCTCTGTCCACGGT 20 20 55.0 50.0 58.1 57.8 0.0 0.0 0.339047 113750 115622 1939-1939 0.500000 57.3 ndhB-minD_p2 ndhB-minD 2 TTGGTGTGAGCCCATTCATC ATCTTCTCTCTGTCCACGGT 20 20 50.0 50.0 58.2 57.8 0.0 0.0 0.385691 113750 115622 1973-1973 0.500000 56.9 ndhB-minD_p3 ndhB-minD 3 AGGACACTCTCGTTCGTAGT ATCTTCTCTCTGTCCACGGT 20 20 50.0 50.0 57.8 57.8 0.0 0.0 0.405757 113750 115622 1943-1943 0.500000 56.8 ndhB-minD_p4 ndhB-minD 4 GTAGTCTGCCTCTCTCGTGA ATCTTCTCTCTGTCCACGGT 20 20 55.0 50.0 58.3 57.8 0.0 0.0 0.483507 113750 115622 1928-1928 0.500000 56.1 ndhB-minD_p5 ndhB-minD 5 ATTCATCTCCCTAGCCCAGG ATCTTCTCTCTGTCCACGGT 20 20 55.0 50.0 58.3 57.8 0.0 0.0 0.484053 113750 115622 1960-1960 0.500000 56.1 minD-ccsA_p1 minD-ccsA 1 TCTTCTCGCTCTGGGAATCT TCAATTGGTTGGGCAAAGGA 20 20 50.0 45.0 57.8 57.9 0.0 5.4 0.245602 116826 118070 1395-1407 1.000000 90.0 minD-ccsA_p2 minD-ccsA 2 TCTTCTCGCTCTGGGAATCT AATTGGTTGGGCAAAGGACT 20 20 50.0 45.0 57.8 57.9 0.0 0.0 0.253142 116826 118070 1393-1405 1.000000 90.0 minD-ccsA_p3 minD-ccsA 3 TCTTCTCGCTCTGGGAATCT ATTGGTTGGGCAAAGGACTT 20 20 50.0 45.0 57.8 57.9 0.0 0.0 0.253142 116826 118070 1392-1404 1.000000 90.0 minD-ccsA_p4 minD-ccsA 4 TCTTCTCGCTCTGGGAATCT TGGGCAAAGGACTTCATAGC 20 20 50.0 50.0 57.8 57.9 0.0 0.0 0.280273 116826 118070 1386-1398 1.000000 89.8 minD-ccsA_p5 minD-ccsA 5 TCTTCTCGCTCTGGGAATCT CAATTGGTTGGGCAAAGGAC 20 20 50.0 50.0 57.8 57.8 0.0 0.0 0.319828 116826 118070 1394-1406 1.000000 89.4 ycf1-chlN_p1 ycf1-chlN 1 TGTTGTTCGGTTCCACACAT GGTTCCCATGCCTAGGATTG 20 20 45.0 55.0 58.0 58.0 0.0 14.8 0.058679 138697 139302 1326-1350 1.000000 84.1 ycf1-chlN_p2 ycf1-chlN 2 GAGGTGGGCGTTAGGTTTAG GGTTCCCATGCCTAGGATTG 20 20 55.0 55.0 58.0 58.0 0.0 14.8 0.033065 138697 139302 1523-1547 1.000000 84.0 ycf1-chlN_p3 ycf1-chlN 3 GAGGTGGGCGTTAGGTTTAG GGACAGCTACCACACTCATG 20 20 55.0 55.0 58.0 58.0 0.0 4.5 0.035683 138697 139302 1875-1899 1.000000 83.4 ycf1-chlN_p4 ycf1-chlN 4 GAGGTGGGCGTTAGGTTTAG ATGCTCCGTGTTTGAGATCC 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.049786 138697 139302 1778-1802 1.000000 83.4 ycf1-chlN_p5 ycf1-chlN 5 GAGGTGGGCGTTAGGTTTAG GGAGCAGATATGGAGGGGAT 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.055962 138697 139302 1733-1757 1.000000 83.4 minD-ndhB_p1 minD-ndhB 1 ATCTTCTCTCTGTCCACGGT CACTCTCGTTCGTAGTCTGC 20 20 50.0 55.0 57.8 58.1 0.0 0.0 0.339047 144084 145956 1939-1939 0.500000 57.3 minD-ndhB_p2 minD-ndhB 2 ATCTTCTCTCTGTCCACGGT TTGGTGTGAGCCCATTCATC 20 20 50.0 50.0 57.8 58.2 0.0 0.0 0.385691 144084 145956 1973-1973 0.500000 56.9 minD-ndhB_p3 minD-ndhB 3 ATCTTCTCTCTGTCCACGGT AGGACACTCTCGTTCGTAGT 20 20 50.0 50.0 57.8 57.8 0.0 0.0 0.405757 144084 145956 1943-1943 0.500000 56.8 minD-ndhB_p4 minD-ndhB 4 ATCTTCTCTCTGTCCACGGT GTAGTCTGCCTCTCTCGTGA 20 20 50.0 55.0 57.8 58.3 0.0 0.0 0.483507 144084 145956 1928-1928 0.500000 56.1 minD-ndhB_p5 minD-ndhB 5 ATCTTCTCTCTGTCCACGGT ATTCATCTCCCTAGCCCAGG 20 20 50.0 55.0 57.8 58.3 0.0 0.0 0.484053 144084 145956 1960-1960 0.500000 56.1 trnI(gau)-orf340_p1 trnI(gau)-orf340 1 TTGAAGCCTACGTCATGCTC GCAATTGAGAGCGAAGGAGA 20 20 50.0 50.0 58.0 58.0 6.8 10.3 0.025881 159417 160247 1842-1842 0.500000 59.8 trnI(gau)-orf340_p2 trnI(gau)-orf340 2 TTGAAGCCTACGTCATGCTC CTCAGCTTCGTAGTCGCTTT 20 20 50.0 50.0 58.0 58.0 6.8 0.0 0.026173 159417 160247 1523-1523 0.500000 59.8 trnI(gau)-orf340_p3 trnI(gau)-orf340 3 TTGAAGCCTACGTCATGCTC CGAGATGCTGTTCGTGAAGA 20 20 50.0 50.0 58.0 58.0 6.8 0.0 0.027533 159417 160247 1749-1749 0.500000 59.8 trnI(gau)-orf340_p4 trnI(gau)-orf340 4 AAGCCTACGTCATGCTCTTG GCAATTGAGAGCGAAGGAGA 20 20 50.0 50.0 58.0 58.0 6.8 10.3 0.031472 159417 160247 1839-1839 0.500000 59.7 trnI(gau)-orf340_p5 trnI(gau)-orf340 5 CTTGAAGCCTACGTCATGCT GCAATTGAGAGCGAAGGAGA 20 20 50.0 50.0 58.0 58.0 0.0 10.3 0.031472 159417 160247 1843-1843 0.500000 59.7 trnF(gaa)-rpl19_p1 trnF(gaa)-rpl19 1 AGCCAATTGATAGCAGAGGC TAAACCCCTTTGGCTCAACC 20 20 50.0 50.0 58.0 58.0 7.1 0.0 0.025482 163878 164877 1289-1289 0.500000 59.8 trnF(gaa)-rpl19_p2 trnF(gaa)-rpl19 2 AGCCAATTGATAGCAGAGGC ACAACGAAAGACAAGCCCAT 20 20 50.0 45.0 58.0 58.0 7.1 0.0 0.040289 163878 164877 1694-1694 0.500000 59.7 trnF(gaa)-rpl19_p3 trnF(gaa)-rpl19 3 AGCCAATTGATAGCAGAGGC GTAAAGTGCGAGTGTTTGCC 20 20 50.0 50.0 58.0 58.0 7.1 0.0 0.053960 163878 164877 1177-1177 0.500000 59.6 trnF(gaa)-rpl19_p4 trnF(gaa)-rpl19 4 AGCCAATTGATAGCAGAGGC TGAGCAATAGCAGCAGGAAG 20 20 50.0 50.0 58.0 58.0 7.1 0.0 0.055650 163878 164877 1140-1140 0.500000 59.6 trnF(gaa)-rpl19_p5 trnF(gaa)-rpl19 5 AGCCAATTGATAGCAGAGGC CTGAGATGGCCTGCTTACAG 20 20 50.0 55.0 58.0 58.0 7.1 3.3 0.070717 163878 164877 1397-1397 0.500000 59.4