primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score psbA-trnK-UUU_p1 psbA-trnK-UUU 1 AAAACACCGAACCATCCGAT AAAATGCAAGCACGGTTTGG 20 20 45.0 45.0 57.8 58.4 0.0 0.0 0.613386 1154 1390 448-449 1.000000 76.3 psbA-trnK-UUU_p2 psbA-trnK-UUU 2 TAAAGACGGTTTTCGGTGCT AAAATGCAAGCACGGTTTGG 20 20 45.0 45.0 57.8 58.4 0.0 0.0 0.662787 1154 1390 427-428 1.000000 76.0 psbA-trnK-UUU_p3 psbA-trnK-UUU 3 AAAACACCGAACCATCCGAT CTTCATCCGACTAGTTCCGG 20 20 45.0 55.0 57.8 57.5 0.0 15.1 0.687914 1154 1390 385-386 1.000000 75.9 psbA-trnK-UUU_p4 psbA-trnK-UUU 4 GCTTGTACTTTCGCGTCTCT AAAATGCAAGCACGGTTTGG 20 20 50.0 45.0 58.3 58.4 5.8 0.0 0.719842 1154 1390 377-378 1.000000 75.7 psbA-trnK-UUU_p5 psbA-trnK-UUU 5 CACCGAACCATCCGATGTAA AAAATGCAAGCACGGTTTGG 20 20 50.0 45.0 57.7 58.4 7.6 0.0 0.722348 1154 1390 444-445 1.000000 75.5 trnS-GCU-trnG-GCC_p1 trnS-GCU-trnG-GCC 1 ATTAGCAATCCGCCGCTTTA CGAACGAATCACACTTTTACCA 20 22 45.0 40.9 58.0 57.3 0.0 0.0 2.757064 8598 9855 1335-1345 1.000000 63.2 trnS-GCU-trnG-GCC_p2 trnS-GCU-trnG-GCC 2 ATTAGCAATCCGCCGCTTTA TCGAACGAATCACACTTTTACC 20 22 45.0 40.9 58.0 57.0 0.0 0.0 3.015948 8598 9855 1336-1346 1.000000 61.1 trnS-GCU-trnG-GCC_p3 trnS-GCU-trnG-GCC 3 CGGAGAGAGAGGGATTCGAA CGAACGAATCACACTTTTACCA 20 22 55.0 40.9 58.3 57.3 0.0 0.0 3.037320 8598 9855 1383-1393 1.000000 60.8 trnS-GCU-trnG-GCC_p4 trnS-GCU-trnG-GCC 4 GCTTTAGTCCACTCAGCCAT CGAACGAATCACACTTTTACCA 20 22 50.0 40.9 57.6 57.3 0.9 0.0 3.128806 8598 9855 1321-1331 1.000000 60.3 trnS-GCU-trnG-GCC_p5 trnS-GCU-trnG-GCC 5 AGTCCACTCAGCCATCTCTC CGAACGAATCACACTTTTACCA 20 22 55.0 40.9 58.5 57.3 0.0 0.0 3.234820 8598 9855 1316-1326 1.000000 59.5 atpF_p1 atpF 1 TCGAAGAGTTACCATTAGTGTCTC AGCTCTGTTCTTTGTTAGTCCT 24 22 41.7 40.9 57.8 57.0 0.0 0.0 7.157433 12546 14127 1716-1823 1.000000 42.8 atpF_p2 atpF 2 CGAAGAGTTACCATTAGTGTCTCT AGCTCTGTTCTTTGTTAGTCCT 24 22 41.7 40.9 57.8 57.0 0.0 0.0 7.162563 12546 14127 1715-1822 1.000000 42.8 atpF_p3 atpF 3 TCGAAGAGTTACCATTAGTGTCT AGCTCTGTTCTTTGTTAGTCCT 23 22 39.1 40.9 56.8 57.0 0.0 0.0 7.198642 12546 14127 1716-1823 1.000000 42.8 atpF_p4 atpF 4 TCGAAGAGTTACCATTAGTGTCTC AGAGCTCTGTTCTTTGTTAGTCC 24 23 41.7 43.5 57.8 58.1 0.0 17.4 7.303317 12546 14127 1718-1825 1.000000 42.8 atpF_p5 atpF 5 TCGAAGAGTTACCATTAGTGTCTC GAGCTCTGTTCTTTGTTAGTCCT 24 23 41.7 43.5 57.8 58.1 0.0 6.4 7.303317 12546 14127 1717-1824 1.000000 42.8 petN-psbM_p1 petN-psbM 1 TCTTGCTTGGGCTGCTTTAA TGCTACTGCACTGTTCATTCT 20 21 45.0 42.9 58.0 57.6 0.0 0.0 1.413468 30051 31025 1127-1130 1.000000 70.0 petN-psbM_p2 petN-psbM 2 AGTATGGGGAAGGAGTGGAC TGCTACTGCACTGTTCATTCT 20 21 55.0 42.9 58.1 57.6 0.0 0.0 1.526483 30051 31025 1076-1079 1.000000 69.2 petN-psbM_p3 petN-psbM 3 GTATGGGGAAGGAGTGGACT TGCTACTGCACTGTTCATTCT 20 21 55.0 42.9 58.1 57.6 0.0 0.0 1.526483 30051 31025 1075-1078 1.000000 69.2 petN-psbM_p4 petN-psbM 4 ATGGTAAGTCTTGCTTGGGC TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 58.2 57.6 0.5 0.0 1.568000 30051 31025 1135-1138 1.000000 68.8 petN-psbM_p5 petN-psbM 5 TATGGGGAAGGAGTGGACTC TGCTACTGCACTGTTCATTCT 20 21 55.0 42.9 57.8 57.6 0.0 0.0 1.583671 30051 31025 1074-1077 1.000000 68.7 psbM-trnD-GUC_p1 psbM-trnD-GUC 1 AGAATGAACAGTGCAGTAGC CCTCGCTGGGATTGTAGTTC 20 20 45.0 55.0 55.8 58.1 0.0 0.0 2.287973 31131 32162 1128-1160 1.000000 65.1 psbM-trnD-GUC_p2 psbM-trnD-GUC 2 AGAATGAACAGTGCAGTAGC AGTTCAATCGGTCAGAGCAC 20 20 45.0 50.0 55.8 57.9 0.0 0.0 2.315353 31131 32162 1113-1145 1.000000 64.9 psbM-trnD-GUC_p3 psbM-trnD-GUC 3 AGAATGAACAGTGCAGTAGC TACACCTCGCTGGGATTGTA 20 20 45.0 50.0 55.8 58.1 0.0 10.4 2.374003 31131 32162 1132-1164 1.000000 64.4 psbM-trnD-GUC_p4 psbM-trnD-GUC 4 AGGAACTAGAATGAACAGTGCA CCTCGCTGGGATTGTAGTTC 22 20 40.9 55.0 57.4 58.1 0.0 0.0 2.682607 31131 32162 1135-1167 1.000000 61.9 psbM-trnD-GUC_p5 psbM-trnD-GUC 5 AGGAACTAGAATGAACAGTGCA AGTTCAATCGGTCAGAGCAC 22 20 40.9 50.0 57.4 57.9 0.0 0.0 2.709987 31131 32162 1120-1152 1.000000 61.7 psbC-trnS-UGA_p1 psbC-trnS-UGA 1 CCTGTTCTTTCCATGACCCC GGTGGCTGAGTGGTTGATAG 20 20 55.0 55.0 58.2 58.0 0.0 0.0 0.190415 37068 37194 239-240 1.000000 81.5 psbC-trnS-UGA_p2 psbC-trnS-UGA 2 CCTGTTCTTTCCATGACCCC GGTTGATAGCTCCGGTCTTG 20 20 55.0 55.0 58.2 58.1 0.0 0.0 0.219251 37068 37194 228-229 1.000000 81.4 psbC-trnS-UGA_p3 psbC-trnS-UGA 3 CCTGTTCTTTCCATGACCCC GCTGAGTGGTTGATAGCTCC 20 20 55.0 55.0 58.2 58.1 0.0 0.0 0.213831 37068 37194 235-236 1.000000 81.3 psbC-trnS-UGA_p4 psbC-trnS-UGA 4 CCTGTTCTTTCCATGACCCC GGCTGAGTGGTTGATAGCTC 20 20 55.0 55.0 58.2 58.1 0.0 0.0 0.213831 37068 37194 236-237 1.000000 81.3 psbC-trnS-UGA_p5 psbC-trnS-UGA 5 TTCCATGACCCCTCTTAGCT GGTGGCTGAGTGGTTGATAG 20 20 50.0 55.0 57.7 58.0 0.0 0.0 0.300272 37068 37194 231-232 1.000000 80.7 ndhJ-ndhK_p1 ndhJ-ndhK 1 GCAATCGAAGCCCAAAGATC CAAGGTTCTTTTGCGCAGAA 20 20 50.0 45.0 57.5 57.5 2.1 11.3 0.972230 51101 51181 173-173 1.000000 73.1 ndhJ-ndhK_p2 ndhJ-ndhK 2 GAGTCCCAATCCTCGGTTTT CAAGGTTCTTTTGCGCAGAA 20 20 50.0 45.0 57.5 57.5 0.0 11.3 0.982003 51101 51181 217-217 1.000000 72.9 ndhJ-ndhK_p3 ndhJ-ndhK 3 GGCAATCGAAGCCCAAAGAT CAAGGTTCTTTTGCGCAGAA 20 20 50.0 45.0 58.9 57.5 18.6 11.3 1.384043 51101 51181 174-174 1.000000 69.8 ndhJ-ndhK_p4 ndhJ-ndhK 4 AGTCCCAATCCTCGGTTTTT CAAGGTTCTTTTGCGCAGAA 20 20 45.0 45.0 57.0 57.5 0.0 11.3 1.462229 51101 51181 216-216 1.000000 69.0 ndhJ-ndhK_p5 ndhJ-ndhK 5 GCAATCGAAGCCCAAAGATC CAAGGTTCTTTTGCGCAGAAT 20 21 50.0 42.9 57.5 58.0 2.1 14.3 1.499168 51101 51181 173-173 1.000000 68.9 clpP-psbB_p1 clpP-psbB 1 CGCACTATACGTCAACCCAA CCCAACCAGAAACTAGAGCC 20 20 50.0 55.0 58.0 57.9 0.0 0.0 0.116294 74055 74489 611-611 1.000000 79.7 clpP-psbB_p2 clpP-psbB 2 CGCACTATACGTCAACCCAA GGCCCAACCAGAAACTAGAG 20 20 50.0 55.0 58.0 57.9 0.0 0.0 0.116294 74055 74489 613-613 1.000000 79.7 clpP-psbB_p3 clpP-psbB 3 CGCACTATACGTCAACCCAA CGATACCAAGGCAAACCCAT 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.238244 74055 74489 531-531 1.000000 78.8 clpP-psbB_p4 clpP-psbB 4 CGCACTATACGTCAACCCAA CCAACCAGAAACTAGAGCCG 20 20 50.0 55.0 58.0 58.3 0.0 0.0 0.274098 74055 74489 610-610 1.000000 78.5 clpP-psbB_p5 clpP-psbB 5 CTTTTGGAACACCAATGGGC CCCAACCAGAAACTAGAGCC 20 20 50.0 55.0 57.8 57.9 3.6 0.0 0.283669 74055 74489 557-557 1.000000 78.4 rpl22_p1 rpl22 1 CCAAGTCTGAAACCAAGTGGA ATTCATTGGCGGGGGATAAC 21 20 47.6 50.0 58.1 58.0 3.8 0.0 1.073674 85475 85861 495-502 1.000000 73.8 rpl22_p2 rpl22 2 CCAAGTCTGAAACCAAGTGGA CATTCATTGGCGGGGGATAA 21 20 47.6 50.0 58.1 58.0 3.8 0.0 1.075094 85475 85861 496-503 1.000000 73.8 rpl22_p3 rpl22 3 CCAAGTCTGAAACCAAGTGGA TTATCATTCATTGGCGGGGG 21 20 47.6 50.0 58.1 58.0 3.8 0.0 1.075094 85475 85861 500-507 1.000000 73.8 rpl22_p4 rpl22 4 CCAAGTCTGAAACCAAGTGGA TCTGACTTTCGCGAGACATG 21 20 47.6 50.0 58.1 58.0 3.8 9.6 1.086438 85475 85861 570-576 1.000000 73.5 rpl22_p5 rpl22 5 CCAAGTCTGAAACCAAGTGGA CCTACTCTGACTTTCGCGAG 21 20 47.6 55.0 58.1 57.8 3.8 9.6 1.250475 85475 85861 575-581 1.000000 72.2 trnI-GAU_p1 trnI-GAU 1 AGAGAGGGATGGGGTTTCTC ATTCTTTATCCCTGGCGCAG 20 20 55.0 50.0 58.1 58.0 0.0 10.8 0.140706 104964 105977 1097-1099 1.000000 79.3 trnI-GAU_p2 trnI-GAU 2 AGAGGGATGGGGTTTCTCTC ATTCTTTATCCCTGGCGCAG 20 20 55.0 50.0 58.1 58.0 0.0 10.8 0.140706 104964 105977 1095-1097 1.000000 79.3 trnI-GAU_p3 trnI-GAU 3 GAGAGGGATGGGGTTTCTCT ATTCTTTATCCCTGGCGCAG 20 20 55.0 50.0 58.1 58.0 0.0 10.8 0.140706 104964 105977 1096-1098 1.000000 79.3 trnI-GAU_p4 trnI-GAU 4 GATGGGGTTTCTCTCGCTTT ATTCTTTATCCCTGGCGCAG 20 20 50.0 50.0 57.9 58.0 0.0 10.8 0.142471 104964 105977 1090-1092 1.000000 79.3 trnI-GAU_p5 trnI-GAU 5 TCTCTCGCTTTTGGCATAGC ATTCTTTATCCCTGGCGCAG 20 20 50.0 50.0 58.3 58.0 11.0 10.8 0.370476 104964 105977 1081-1083 1.000000 77.5 trnR-ACG-trnN-GUU_p1 trnR-ACG-trnN-GUU 1 CAGAGGATTAGAGCACGTGG CCGTTGTTCCTCAGTAGCTC 20 20 55.0 55.0 57.8 58.0 18.9 0.0 0.218238 110759 111360 743-758 1.000000 78.7 trnR-ACG-trnN-GUU_p2 trnR-ACG-trnN-GUU 2 GAACAGATCCAGTGGAGACG CCGTTGTTCCTCAGTAGCTC 20 20 55.0 55.0 57.7 58.0 18.7 0.0 0.288158 110759 111360 780-795 1.000000 78.1 trnR-ACG-trnN-GUU_p3 trnR-ACG-trnN-GUU 3 CAGAGGATTAGAGCACGTGG TGGTCGTAGGTTCGAATCCT 20 20 55.0 50.0 57.8 58.2 18.9 18.9 0.372539 110759 111360 694-709 1.000000 77.5 trnR-ACG-trnN-GUU_p4 trnR-ACG-trnN-GUU 4 CAGAGGATTAGAGCACGTGG CTGGTCGTAGGTTCGAATCC 20 20 55.0 55.0 57.8 57.8 18.9 4.4 0.421214 110759 111360 695-710 1.000000 77.1 trnR-ACG-trnN-GUU_p5 trnR-ACG-trnN-GUU 5 GAACAGATCCAGTGGAGACG TGGTCGTAGGTTCGAATCCT 20 20 55.0 50.0 57.7 58.2 18.7 18.9 0.442458 110759 111360 731-746 1.000000 76.9 ndhF_p1 ndhF 1 GGGTATTGGGAAAAGAAGAGCA GCGATAAGAATTGGTGAATCGG 22 22 45.5 45.5 58.3 57.9 0.0 0.0 4.436690 112712 114934 2325-2362 1.000000 45.8 ndhF_p2 ndhF 2 TGGGTATTGGGAAAAGAAGAGC GCGATAAGAATTGGTGAATCGG 22 22 45.5 45.5 58.3 57.9 0.0 0.0 4.436690 112712 114934 2326-2363 1.000000 45.8 ndhF_p3 ndhF 3 GGGTATTGGGAAAAGAAGAGC GCGATAAGAATTGGTGAATCGG 21 22 47.6 45.5 56.6 57.9 0.0 0.0 4.562698 112712 114934 2325-2362 1.000000 44.8 ndhF_p4 ndhF 4 GGGTATTGGGAAAAGAAGAGCA CGAAAGCGATAAGAATTGGTGA 22 22 45.5 40.9 58.3 57.1 0.0 0.0 5.160705 112712 114934 2330-2367 1.000000 41.3 ndhF_p5 ndhF 5 GGGTATTGGGAAAAGAAGAGCA TCGAAAGCGATAAGAATTGGTG 22 22 45.5 40.9 58.3 57.1 0.0 0.0 5.160705 112712 114934 2331-2368 1.000000 41.3 ccsA_p1 ccsA 1 TAGACACGCTGCTCTTAGGA TTCTCGATGGCTTCTCTTGC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.140013 116972 117937 1699-1700 1.000000 80.0 ccsA_p2 ccsA 2 TAGACACGCTGCTCTTAGGA TTCTTGGTGGGAACGAGTTG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.162484 116972 117937 1801-1802 1.000000 79.8 ccsA_p3 ccsA 3 TAGACACGCTGCTCTTAGGA CTCGATGGCTTCTCTTGCAT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.173449 116972 117937 1697-1698 1.000000 79.7 ccsA_p4 ccsA 4 TAGACACGCTGCTCTTAGGA TTGCATTGCCAGGAATGAGT 20 20 50.0 45.0 57.9 58.1 0.0 15.1 0.196790 116972 117937 1683-1684 1.000000 79.6 ccsA_p5 ccsA 5 TAGACACGCTGCTCTTAGGA GAATGAGTGGTTTCGTTGCG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.173806 116972 117937 1671-1671 0.500000 58.6 ccsA-ndhD_p1 ccsA-ndhD 1 CGAATTCGGCACTTGTAGCT TGACAAAGTGCAGGCTATCC 20 20 50.0 50.0 58.6 57.9 20.2 0.0 0.754013 117938 118168 393-394 1.000000 77.4 ccsA-ndhD_p2 ccsA-ndhD 2 ATTCGGCACTTGTAGCTTCT TGACAAAGTGCAGGCTATCC 20 20 45.0 50.0 57.2 57.9 0.0 0.0 0.884024 117938 118168 390-391 1.000000 76.4 ccsA-ndhD_p3 ccsA-ndhD 3 ACGAATTCGGCACTTGTAGC TGACAAAGTGCAGGCTATCC 20 20 50.0 50.0 58.9 57.9 29.8 0.0 1.037528 117938 118168 394-395 1.000000 75.1 ccsA-ndhD_p4 ccsA-ndhD 4 CGAATTCGGCACTTGTAGCT GACAAAGTGCAGGCTATCCT 20 20 50.0 50.0 58.6 57.6 20.2 0.0 1.050101 117938 118168 392-393 1.000000 75.1 ccsA-ndhD_p5 ccsA-ndhD 5 CGAATTCGGCACTTGTAGCT CGGATTTCGTTCTCTCGCTA 20 20 50.0 50.0 58.6 57.5 20.2 0.0 1.110348 117938 118168 418-419 1.000000 74.4 psaC-ndhE_p1 psaC-ndhE 1 ACATCCGTCCCAAGGTATCA GGAAGCAGCTATTGGGCTAG 20 20 50.0 55.0 58.1 58.1 0.0 0.0 0.236326 120038 120516 666-672 1.000000 82.9 psaC-ndhE_p2 psaC-ndhE 2 CAATACATCTGTGGGGCAGG GGAAGCAGCTATTGGGCTAG 20 20 55.0 55.0 58.3 58.1 0.0 0.0 0.426512 120038 120516 642-648 1.000000 81.5 psaC-ndhE_p3 psaC-ndhE 3 CCAATACATCTGTGGGGCAG GGAAGCAGCTATTGGGCTAG 20 20 55.0 55.0 58.3 58.1 0.0 0.0 0.426512 120038 120516 643-649 1.000000 81.5 psaC-ndhE_p4 psaC-ndhE 4 CAGGCTCGTACACATTGAGT GGAAGCAGCTATTGGGCTAG 20 20 50.0 55.0 57.6 58.1 0.0 0.0 0.480736 120038 120516 626-632 1.000000 81.2 psaC-ndhE_p5 psaC-ndhE 5 AGCTTTACATCCGTCCCAAG GGAAGCAGCTATTGGGCTAG 20 20 50.0 55.0 57.6 58.1 0.0 0.0 0.513707 120038 120516 672-678 1.000000 80.6 ycf1_p1 ycf1 1 TGATTGGTATGATCCACGGT ACGCATATCGACACCAAGAT 20 20 45.0 45.0 56.3 57.1 0.0 0.0 2.579289 127800 127919 124-253 1.000000 63.8 ycf1_p2 ycf1 2 ACGCATCAAAAAGTAGCACA ACGCATATCGACACCAAGAT 20 20 40.0 45.0 56.3 57.1 0.0 0.0 2.618217 127800 127919 94-223 1.000000 63.6 ycf1_p3 ycf1 3 TGATTGGTATGATCCACGGT GGACCAATACGCATATCGACA 20 21 45.0 47.6 56.3 58.0 0.0 0.0 2.709750 127800 127919 132-261 1.000000 62.7 ycf1_p4 ycf1 4 TGATTGGTATGATCCACGGT TGGACCAATACGCATATCGAC 20 21 45.0 47.6 56.3 58.0 0.0 0.0 2.709750 127800 127919 133-262 1.000000 62.7 ycf1_p5 ycf1 5 ACGCATCAAAAAGTAGCACA GGACCAATACGCATATCGACA 20 21 40.0 47.6 56.3 58.0 0.0 0.0 2.748678 127800 127919 102-231 1.000000 62.5 trnN-GUU-trnR-ACG_p1 trnN-GUU-trnR-ACG 1 CCGTTGTTCCTCAGTAGCTC CAGAGGATTAGAGCACGTGG 20 20 55.0 55.0 58.0 57.8 0.0 18.9 0.218238 132577 133178 743-758 1.000000 78.7 trnN-GUU-trnR-ACG_p2 trnN-GUU-trnR-ACG 2 CCGTTGTTCCTCAGTAGCTC GAACAGATCCAGTGGAGACG 20 20 55.0 55.0 58.0 57.7 0.0 18.7 0.288158 132577 133178 780-795 1.000000 78.1 trnN-GUU-trnR-ACG_p3 trnN-GUU-trnR-ACG 3 TGGTCGTAGGTTCGAATCCT CAGAGGATTAGAGCACGTGG 20 20 50.0 55.0 58.2 57.8 18.9 18.9 0.372539 132577 133178 694-709 1.000000 77.5 trnN-GUU-trnR-ACG_p4 trnN-GUU-trnR-ACG 4 CTGGTCGTAGGTTCGAATCC CAGAGGATTAGAGCACGTGG 20 20 55.0 55.0 57.8 57.8 4.4 18.9 0.421214 132577 133178 695-710 1.000000 77.1 trnN-GUU-trnR-ACG_p5 trnN-GUU-trnR-ACG 5 TGGTCGTAGGTTCGAATCCT GAACAGATCCAGTGGAGACG 20 20 50.0 55.0 58.2 57.7 18.9 18.7 0.442458 132577 133178 731-746 1.000000 76.9