primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 GTTCTTCAAGTCGCACGTTG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.081289 5916 6624 744-789 1.000000 84.6 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 GTTCTTCAAGTCGCACGTTG TAAGGCATCGGGTTTTGGTC 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.176209 5916 6624 774-819 1.000000 83.8 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 ATGTTCTTCAAGTCGCACGT GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 0.0 16.9 0.210236 5916 6624 746-791 1.000000 83.6 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 5916 6624 737-782 1.000000 83.5 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 CATGTTCTTCAAGTCGCACG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.8 58.1 0.0 16.9 0.293454 5916 6624 747-792 1.000000 82.9 rpoC1-rpoB_p1 rpoC1-rpoB 1 TGGCCCAAGCACTTATTTGT ACGATCTTTGGCTCTGGAAC 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.108847 23211 23242 181-181 1.000000 79.6 rpoC1-rpoB_p2 rpoC1-rpoB 2 TGTGGCCCAAGCACTTATTT ACGATCTTTGGCTCTGGAAC 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.108847 23211 23242 183-183 1.000000 79.6 rpoC1-rpoB_p3 rpoC1-rpoB 3 TTGTGGCCCAAGCACTTATT ACGATCTTTGGCTCTGGAAC 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.108847 23211 23242 184-184 1.000000 79.6 rpoC1-rpoB_p4 rpoC1-rpoB 4 TTTGTGGCCCAAGCACTTAT ACGATCTTTGGCTCTGGAAC 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.108847 23211 23242 185-185 1.000000 79.6 rpoC1-rpoB_p5 rpoC1-rpoB 5 GGTAGGATTTTTGTGGCCCA ACGATCTTTGGCTCTGGAAC 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.168969 23211 23242 194-194 1.000000 79.1 psbE-petL_p1 psbE-petL 1 CAACCCGCAATGAATAGGGA GAGGTTATAGTTAAAGCCGCT 20 21 50.0 42.9 57.9 55.5 6.4 0.0 3.561071 66355 67508 1314-1319 1.000000 52.1 psbE-petL_p2 psbE-petL 2 AGAACGTTCTCCTGTGCTTC GAGGTTATAGTTAAAGCCGCT 20 21 50.0 42.9 57.8 55.5 24.9 0.0 3.666079 66355 67508 1237-1242 1.000000 51.3 psbE-petL_p3 psbE-petL 3 ACGAATAACCAACCCGCAAT GAGGTTATAGTTAAAGCCGCT 20 21 45.0 42.9 58.2 55.5 0.0 0.0 3.680757 66355 67508 1323-1328 1.000000 51.1 psbE-petL_p4 psbE-petL 4 TGCTGACGAATAACCAACCC GAGGTTATAGTTAAAGCCGCT 20 21 50.0 42.9 58.2 55.5 0.0 0.0 3.693662 66355 67508 1328-1333 1.000000 51.0 psbE-petL_p5 psbE-petL 5 CGAATAACCAACCCGCAATG GAGGTTATAGTTAAAGCCGCT 20 21 50.0 42.9 57.8 55.5 0.0 0.0 3.697087 66355 67508 1322-1327 1.000000 51.0 trnP-UGG-psaJ_p1 trnP-UGG-psaJ 1 ACCCGTGACATTTTGTACCC TGTCAACGCATCTGGGAAAA 20 20 50.0 45.0 58.1 58.0 0.0 0.8 0.125490 68388 68824 585-606 1.000000 82.2 trnP-UGG-psaJ_p2 trnP-UGG-psaJ 2 CCCGTGACATTTTGTACCCA TGTCAACGCATCTGGGAAAA 20 20 50.0 45.0 58.1 58.0 0.0 0.8 0.126833 68388 68824 584-605 1.000000 82.2 trnP-UGG-psaJ_p3 trnP-UGG-psaJ 3 ACAGGATTTGAACCCGTGAC TGTCAACGCATCTGGGAAAA 20 20 50.0 45.0 58.1 58.0 0.0 0.8 0.133526 68388 68824 596-617 1.000000 82.1 trnP-UGG-psaJ_p4 trnP-UGG-psaJ 4 CAGGATTTGAACCCGTGACA TGTCAACGCATCTGGGAAAA 20 20 50.0 45.0 58.1 58.0 0.0 0.8 0.134859 68388 68824 595-616 1.000000 82.1 trnP-UGG-psaJ_p5 trnP-UGG-psaJ 5 TGACAGGATTTGAACCCGTG TGTCAACGCATCTGGGAAAA 20 20 50.0 45.0 58.1 58.0 0.0 0.8 0.134859 68388 68824 598-619 1.000000 82.1 rpl22-rps19_p1 rpl22-rps19 1 TACTCGTCGTGCTTTGTGAG CACCGACTCTAAACTTCCGG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.054113 85914 85949 197-197 1.000000 80.0 rpl22-rps19_p2 rpl22-rps19 2 TACTCGTCGTGCTTTGTGAG GGAGAATTTGCACCGACTCT 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.146887 85914 85949 207-207 1.000000 79.2 rpl22-rps19_p3 rpl22-rps19 3 TACTCGTCGTGCTTTGTGAG ACGGATCGTATGGTAGGTCA 20 20 50.0 50.0 58.0 57.6 0.0 0.0 0.399639 85914 85949 234-234 1.000000 77.1 rpl22-rps19_p4 rpl22-rps19 4 TACTCGTCGTGCTTTGTGAG TGCACCGACTCTAAACTTCC 20 20 50.0 50.0 58.0 57.5 0.0 0.0 0.496892 85914 85949 199-199 1.000000 76.4 rpl22-rps19_p5 rpl22-rps19 5 TTACTCGTCGTGCTTTGTGA CACCGACTCTAAACTTCCGG 20 20 45.0 55.0 57.5 58.0 0.0 0.0 0.503239 85914 85949 198-198 1.000000 76.4 rrn4.5-rrn5_p1 rrn4.5-rrn5 1 CCTAACAGACCGATAGACTTGA ACGCCTAGGACACCAGAATA 22 20 45.5 50.0 56.8 57.8 0.0 14.8 3.403490 108696 108951 300-300 1.000000 56.2 rrn4.5-rrn5_p2 rrn4.5-rrn5 2 CCTAACAGACCGATAGACTTGA TACGCCTAGGACACCAGAAT 22 20 45.5 50.0 56.8 57.8 0.0 14.8 3.403490 108696 108951 301-301 1.000000 56.2 rrn4.5-rrn5_p3 rrn4.5-rrn5 3 CCTAACAGACCGATAGACTTGA GTTCCTCTACGCCTAGGACA 22 20 45.5 55.0 56.8 58.2 0.0 14.8 3.488731 108696 108951 308-308 1.000000 55.5 rrn4.5-rrn5_p4 rrn4.5-rrn5 4 CCTAACAGACCGATAGACTTGA TTCCTCTACGCCTAGGACAC 22 20 45.5 55.0 56.8 58.2 0.0 14.8 3.488731 108696 108951 307-307 1.000000 55.5 rrn4.5-rrn5_p5 rrn4.5-rrn5 5 ACAGACCGATAGACTTGAAC ACGCCTAGGACACCAGAATA 20 20 45.0 50.0 54.5 57.8 0.0 14.8 3.608241 108696 108951 296-296 1.000000 54.6 rrn5_p1 rrn5 1 ACCTGGGGCTGTAGTATGTT AATGGTGCATTCCAAGGTGT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.047165 108952 109071 984-984 0.500000 59.6 rrn5_p2 rrn5 2 TGGGGCTGTAGTATGTTCCA AATGGTGCATTCCAAGGTGT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.054300 108952 109071 981-981 0.500000 59.6 rrn5_p3 rrn5 3 GTCAAGTGGAAGTGCAGTGA AATGGTGCATTCCAAGGTGT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.060451 108952 109071 571-571 0.500000 59.5 rrn5_p4 rrn5 4 CAGCTGAGGATGCCTAACAG AATGGTGCATTCCAAGGTGT 20 20 55.0 45.0 58.0 58.0 8.4 0.0 0.063182 108952 109071 545-545 0.500000 59.5 rrn5_p5 rrn5 5 GCTGAGGATGCCTAACAGAC AATGGTGCATTCCAAGGTGT 20 20 55.0 45.0 58.1 58.0 6.4 0.0 0.067265 108952 109071 543-543 0.500000 59.5 rrn5-trnR-ACG_p1 rrn5-trnR-ACG 1 GTCAAGTGGAAGTGCAGTGA CCACTTCGACAAAAGACCCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.084648 109072 109327 877-880 1.000000 84.4 rrn5-trnR-ACG_p2 rrn5-trnR-ACG 2 GTCAAGTGGAAGTGCAGTGA ACTTGCTCTGCTATTCTGCC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.081971 109072 109327 1023-1026 1.000000 83.8 rrn5-trnR-ACG_p3 rrn5-trnR-ACG 3 TGGTGGTCAAACTGTACTGC ACTTGCTCTGCTATTCTGCC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.073737 109072 109327 656-656 0.500000 59.4 rrn5-trnR-ACG_p4 rrn5-trnR-ACG 4 TGGTGGTCAAACTGTACTGC CCACTTCGACAAAAGACCCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.076413 109072 109327 510-510 0.500000 59.4 rrn5-trnR-ACG_p5 rrn5-trnR-ACG 5 CAGCTGAGGATGCCTAACAG ACTTGCTCTGCTATTCTGCC 20 20 55.0 50.0 58.0 58.0 8.4 0.0 0.084702 109072 109327 997-997 0.500000 59.3 trnR-ACG_p1 trnR-ACG 1 GTCAAGTGGAAGTGCAGTGA CCGTTGTTCCTCAGTAGCTC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.048772 109328 109401 1460-1463 1.000000 82.7 trnR-ACG_p2 trnR-ACG 2 ACACCTTGGAATGCACCATT CCGTTGTTCCTCAGTAGCTC 20 20 45.0 55.0 58.0 58.0 0.0 0.0 0.016341 109328 109401 909-909 0.500000 59.9 trnR-ACG_p3 trnR-ACG 3 TGGTGGTCAAACTGTACTGC CCGTTGTTCCTCAGTAGCTC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.040537 109328 109401 1093-1093 0.500000 59.7 trnR-ACG_p4 trnR-ACG 4 ACACCTTGGAATGCACCATT ACTTGCTCTGCTATTCTGCC 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.049540 109328 109401 472-472 0.500000 59.6 trnR-ACG_p5 trnR-ACG 5 CAGCTGAGGATGCCTAACAG CCGTTGTTCCTCAGTAGCTC 20 20 55.0 55.0 58.0 58.0 8.4 0.0 0.051503 109328 109401 1434-1434 0.500000 59.6 ccsA_p1 ccsA 1 TCCGATTTCCATTTCCAAATTTGT GCTTTTGCTTATGCCTTGTCC 24 21 33.3 47.6 57.9 58.4 16.7 0.0 5.497468 115892 116866 1097-1099 1.000000 40.4 ccsA_p2 ccsA 2 CCGATTTCCATTTCCAAATTTGT GCTTTTGCTTATGCCTTGTCC 23 21 34.8 47.6 56.5 58.4 16.7 0.0 5.840115 115892 116866 1096-1098 1.000000 40.4 ccsA_p3 ccsA 3 TCCGATTTCCATTTCCAAATTTGT TGCTTATGCCTTGTCCTATGT 24 21 33.3 42.9 57.9 57.1 16.7 0.0 6.039808 115892 116866 1092-1094 1.000000 40.4 ccsA_p4 ccsA 4 TTCCGATTTCCATTTCCAAA GCTTTTGCTTATGCCTTGTCC 20 21 35.0 47.6 53.3 58.4 0.0 0.0 6.053348 115892 116866 1098-1100 1.000000 40.4 ccsA_p5 ccsA 5 TTTCCGATTTCCATTTCCAA GCTTTTGCTTATGCCTTGTCC 20 21 35.0 47.6 53.3 58.4 0.0 0.0 6.053348 115892 116866 1099-1101 1.000000 40.4 ccsA-ndhD_p1 ccsA-ndhD 1 GGGCTACATAGTTACGGTTCA TCAGTTGAGAAGGTGGAAGC 21 20 47.6 50.0 57.2 57.4 0.0 0.0 2.357455 116867 117061 285-285 1.000000 64.2 ccsA-ndhD_p2 ccsA-ndhD 2 AGGGCTACATAGTTACGGTTC TCAGTTGAGAAGGTGGAAGC 21 20 47.6 50.0 56.9 57.4 0.0 0.0 2.642455 116867 117061 286-286 1.000000 61.9 ccsA-ndhD_p3 ccsA-ndhD 3 GGGCTACATAGTTACGGTTCA ATCAGTTGAGAAGGTGGAAGC 21 21 47.6 47.6 57.2 57.9 0.0 0.0 2.871525 116867 117061 286-286 1.000000 60.1 ccsA-ndhD_p4 ccsA-ndhD 4 GGGCTACATAGTTACGGTTCAT TCAGTTGAGAAGGTGGAAGC 22 20 45.5 50.0 57.7 57.4 0.0 0.0 2.883258 116867 117061 285-285 1.000000 60.0 ccsA-ndhD_p5 ccsA-ndhD 5 GGGCTACATAGTTACGGTTCA TGGCATTTACCCAGATTTCGT 21 21 47.6 42.9 57.2 57.9 0.0 0.0 2.886925 116867 117061 316-316 1.000000 59.7 rps15-ycf1_p1 rps15-ycf1 1 CAGACCCCCTGTTTTCTTCT AGCTTGTATGAATCGTTATTGGT 20 23 50.0 34.8 57.0 56.3 0.0 0.0 5.626084 124923 125215 454-455 1.000000 42.3 rps15-ycf1_p2 rps15-ycf1 2 CAGACCCCCTGTTTTCTTCTT AGCTTGTATGAATCGTTATTGGT 21 23 47.6 34.8 57.8 56.3 0.0 0.0 5.896316 124923 125215 454-455 1.000000 42.3 rps15-ycf1_p3 rps15-ycf1 3 CAGACCCCCTGTTTTCTTCT AGCTTGTATGAATCGTTATTGGTT 20 24 50.0 33.3 57.0 57.0 0.0 0.0 5.961896 124923 125215 454-455 1.000000 42.3 rps15-ycf1_p4 rps15-ycf1 4 CAGACCCCCTGTTTTCTTCT GCTTGTATGAATCGTTATTGGT 20 22 50.0 36.4 57.0 54.9 0.0 0.0 6.056979 124923 125215 453-454 1.000000 42.3 rps15-ycf1_p5 rps15-ycf1 5 TGAAATTCAACAGACCCCCT AGCTTGTATGAATCGTTATTGGT 20 23 45.0 34.8 56.6 56.3 0.0 0.0 6.036136 124923 125215 464-465 1.000000 42.2 trnR-ACG_p1 trnR-ACG 1 CCGTTGTTCCTCAGTAGCTC GTCAAGTGGAAGTGCAGTGA 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.048772 131926 131999 1460-1463 1.000000 82.7 trnR-ACG_p2 trnR-ACG 2 CCGTTGTTCCTCAGTAGCTC ACACCTTGGAATGCACCATT 20 20 55.0 45.0 58.0 58.0 0.0 0.0 0.016341 131926 131999 909-909 0.500000 59.9 trnR-ACG_p3 trnR-ACG 3 CCGTTGTTCCTCAGTAGCTC TGGTGGTCAAACTGTACTGC 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.040537 131926 131999 1093-1093 0.500000 59.7 trnR-ACG_p4 trnR-ACG 4 ACTTGCTCTGCTATTCTGCC ACACCTTGGAATGCACCATT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.049540 131926 131999 472-472 0.500000 59.6 trnR-ACG_p5 trnR-ACG 5 CCGTTGTTCCTCAGTAGCTC CAGCTGAGGATGCCTAACAG 20 20 55.0 55.0 58.0 58.0 0.0 8.4 0.051503 131926 131999 1434-1434 0.500000 59.6 trnR-ACG-rrn5_p1 trnR-ACG-rrn5 1 CCACTTCGACAAAAGACCCA GTCAAGTGGAAGTGCAGTGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.084648 132000 132255 877-880 1.000000 84.4 trnR-ACG-rrn5_p2 trnR-ACG-rrn5 2 ACTTGCTCTGCTATTCTGCC GTCAAGTGGAAGTGCAGTGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.081971 132000 132255 1023-1026 1.000000 83.8 trnR-ACG-rrn5_p3 trnR-ACG-rrn5 3 ACTTGCTCTGCTATTCTGCC TGGTGGTCAAACTGTACTGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.073737 132000 132255 656-656 0.500000 59.4 trnR-ACG-rrn5_p4 trnR-ACG-rrn5 4 CCACTTCGACAAAAGACCCA TGGTGGTCAAACTGTACTGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.076413 132000 132255 510-510 0.500000 59.4 trnR-ACG-rrn5_p5 trnR-ACG-rrn5 5 ACTTGCTCTGCTATTCTGCC CAGCTGAGGATGCCTAACAG 20 20 50.0 55.0 58.0 58.0 0.0 8.4 0.084702 132000 132255 997-997 0.500000 59.3 rrn5_p1 rrn5 1 AATGGTGCATTCCAAGGTGT ACCTGGGGCTGTAGTATGTT 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.047165 132256 132375 984-984 0.500000 59.6 rrn5_p2 rrn5 2 AATGGTGCATTCCAAGGTGT TGGGGCTGTAGTATGTTCCA 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.054300 132256 132375 981-981 0.500000 59.6 rrn5_p3 rrn5 3 AATGGTGCATTCCAAGGTGT GTCAAGTGGAAGTGCAGTGA 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.060451 132256 132375 571-571 0.500000 59.5 rrn5_p4 rrn5 4 AATGGTGCATTCCAAGGTGT CAGCTGAGGATGCCTAACAG 20 20 45.0 55.0 58.0 58.0 0.0 8.4 0.063182 132256 132375 545-545 0.500000 59.5 rrn5_p5 rrn5 5 AATGGTGCATTCCAAGGTGT GCTGAGGATGCCTAACAGAC 20 20 45.0 55.0 58.0 58.1 0.0 6.4 0.067265 132256 132375 543-543 0.500000 59.5 rrn5-rrn4.5_p1 rrn5-rrn4.5 1 ACGCCTAGGACACCAGAATA CCTAACAGACCGATAGACTTGA 20 22 50.0 45.5 57.8 56.8 14.8 0.0 3.403490 132376 132631 300-300 1.000000 56.2 rrn5-rrn4.5_p2 rrn5-rrn4.5 2 TACGCCTAGGACACCAGAAT CCTAACAGACCGATAGACTTGA 20 22 50.0 45.5 57.8 56.8 14.8 0.0 3.403490 132376 132631 301-301 1.000000 56.2 rrn5-rrn4.5_p3 rrn5-rrn4.5 3 GTTCCTCTACGCCTAGGACA CCTAACAGACCGATAGACTTGA 20 22 55.0 45.5 58.2 56.8 14.8 0.0 3.488731 132376 132631 308-308 1.000000 55.5 rrn5-rrn4.5_p4 rrn5-rrn4.5 4 TTCCTCTACGCCTAGGACAC CCTAACAGACCGATAGACTTGA 20 22 55.0 45.5 58.2 56.8 14.8 0.0 3.488731 132376 132631 307-307 1.000000 55.5 rrn5-rrn4.5_p5 rrn5-rrn4.5 5 ACGCCTAGGACACCAGAATA ACAGACCGATAGACTTGAAC 20 20 50.0 45.0 57.8 54.5 14.8 0.0 3.608241 132376 132631 296-296 1.000000 54.6