primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AACGGATCGTGTCCTTCAAG GAAATTGAAATGGGGCGTGG 20 20 50.0 50.0 57.9 58.0 7.8 0.0 0.089038 5794 6540 80-976 1.000000 86.8 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 AACGGATCGTGTCCTTCAAG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.9 58.1 7.8 16.9 0.156387 5794 6540 80-918 1.000000 86.5 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AAGTCGCACGTTGCTTTCTA GAAATTGAAATGGGGCGTGG 20 20 45.0 50.0 58.1 58.0 8.1 0.0 0.148076 5794 6540 80-959 1.000000 86.4 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 5794 6540 80-901 1.000000 86.1 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 CAACGGATCGTGTCCTTCAA GAAATTGAAATGGGGCGTGG 20 20 50.0 50.0 58.2 58.0 7.8 0.0 0.217997 5794 6540 80-977 1.000000 85.8 trnG-UCC-trnR-UCU_p1 trnG-UCC-trnR-UCU 1 AGCCTTCCAAGCTAACGATG AGAAGACCTCTGTCCTATCCA 20 21 50.0 47.6 58.0 56.9 0.0 0.0 2.081443 9248 9410 80-266 1.000000 70.6 trnG-UCC-trnR-UCU_p2 trnG-UCC-trnR-UCU 2 CCTAGCCTTCCAAGCTAACG AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 58.1 56.9 0.0 0.0 2.110280 9248 9410 80-269 1.000000 70.3 trnG-UCC-trnR-UCU_p3 trnG-UCC-trnR-UCU 3 AGCCTTCCAAGCTAACGATG AGGTTTAGAAGACCTCTGTCCT 20 22 50.0 45.5 58.0 57.9 0.0 0.0 2.164771 9248 9410 80-272 1.000000 69.8 trnG-UCC-trnR-UCU_p4 trnG-UCC-trnR-UCU 4 CCTAGCCTTCCAAGCTAACG AGGTTTAGAAGACCTCTGTCCT 20 22 55.0 45.5 58.1 57.9 0.0 0.0 2.193608 9248 9410 80-275 1.000000 69.5 trnG-UCC-trnR-UCU_p5 trnG-UCC-trnR-UCU 5 CCCTAGCCTTCCAAGCTAAC AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 57.7 56.9 0.0 0.0 2.385293 9248 9410 80-270 1.000000 68.1 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 CGAGCCCATATCCTTGCTTT AACGGGGCTTCACAATCTTT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.031752 26303 27403 80-1846 1.000000 84.3 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 CGAGCCCATATCCTTGCTTT ACGGGGCTTCACAATCTTTT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.031752 26303 27403 80-1845 1.000000 84.3 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 CCGCCTACACAAGCAAATTG AACGGGGCTTCACAATCTTT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.023370 26303 27403 80-2038 1.000000 84.1 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 CCGCCTACACAAGCAAATTG ACGGGGCTTCACAATCTTTT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.023370 26303 27403 80-2037 1.000000 84.1 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 CCGCCTACACAAGCAAATTG GAAGGGAATCGCGAAGTCTT 20 20 50.0 50.0 58.0 58.0 0.0 15.2 0.030286 26303 27403 80-2112 1.000000 83.9 trnC-GCA-petN_p1 trnC-GCA-petN 1 TTTCCCCAGTTCAAATCCGG ACTTCTTCCCCACACTACGA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.087498 27475 28308 80-949 1.000000 85.5 trnC-GCA-petN_p2 trnC-GCA-petN 2 TTTCCCCAGTTCAAATCCGG TTCTTCCCCACACTACGAGT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.087498 27475 28308 80-947 1.000000 85.5 trnC-GCA-petN_p3 trnC-GCA-petN 3 TTTCCCCAGTTCAAATCCGG CACTTCTTCCCCACACTACG 20 20 50.0 55.0 58.1 57.9 0.0 0.0 0.162414 27475 28308 80-950 1.000000 84.8 trnC-GCA-petN_p4 trnC-GCA-petN 4 GTATCATTTTGGCGGCATGG ACTTCTTCCCCACACTACGA 20 20 50.0 50.0 57.9 58.0 14.3 0.0 0.143966 27475 28308 80-1001 1.000000 84.7 trnC-GCA-petN_p5 trnC-GCA-petN 5 GTATCATTTTGGCGGCATGG TTCTTCCCCACACTACGAGT 20 20 50.0 50.0 57.9 58.0 14.3 0.0 0.143966 27475 28308 80-999 1.000000 84.7 petN-psbM_p1 petN-psbM 1 ACTCGTAGTGTGGGGAAGAA TCCTACCGCCTTTCTGCTTA 20 20 50.0 50.0 58.0 58.4 0.0 0.0 0.441446 28399 28906 80-595 1.000000 83.6 petN-psbM_p2 petN-psbM 2 TCGTAGTGTGGGGAAGAAGT TCCTACCGCCTTTCTGCTTA 20 20 50.0 50.0 58.0 58.4 0.0 0.0 0.441446 28399 28906 80-593 1.000000 83.6 petN-psbM_p3 petN-psbM 3 CGTAGTGTGGGGAAGAAGTG TCCTACCGCCTTTCTGCTTA 20 20 55.0 50.0 57.9 58.4 0.0 0.0 0.516362 28399 28906 80-592 1.000000 83.1 petN-psbM_p4 petN-psbM 4 TCGTAGTGTGGGGAAGAAGT CCTACCGCCTTTCTGCTTAT 20 20 50.0 50.0 58.0 57.4 0.0 0.0 0.627434 28399 28906 80-592 1.000000 82.2 petN-psbM_p5 petN-psbM 5 ACTCGTAGTGTGGGGAAGAA CCTACCGCCTTTCTGCTTAT 20 20 50.0 50.0 58.0 57.4 0.0 0.0 0.627434 28399 28906 80-594 1.000000 82.1 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 GCTGCCTCCTTGAAAGAGAG GAACCGATGACTTACGCCTT 20 20 55.0 50.0 58.3 58.0 0.0 0.0 0.269359 29935 30504 80-727 1.000000 80.9 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 GCTGCCTCCTTGAAAGAGAG CCATGGCGTTACTCTACCAC 20 20 55.0 55.0 58.3 58.1 0.0 0.0 0.327456 29935 30504 80-706 1.000000 80.6 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 GCTGCCTCCTTGAAAGAGAG TGGCGTTACTCTACCACTGA 20 20 55.0 50.0 58.3 58.1 0.0 0.0 0.349611 29935 30504 80-703 1.000000 80.4 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 GCTGCCTCCTTGAAAGAGAG CCGATGACTTACGCCTTACC 20 20 55.0 55.0 58.3 58.2 0.0 0.0 0.414292 29935 30504 80-724 1.000000 79.8 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 GCTGCCTCCTTGAAAGAGAG TTGAACCGATGACTTACGCC 20 20 55.0 50.0 58.3 58.3 0.0 0.0 0.546195 29935 30504 80-729 1.000000 78.7 psaA-ycf3_p1 psaA-ycf3 1 GCCCATTCCTCGAAAGAAGT TCACGAGGCGTTTCGAATAG 20 20 50.0 50.0 57.9 58.1 4.1 15.7 0.211199 40383 41131 80-849 1.000000 85.4 psaA-ycf3_p2 psaA-ycf3 2 GCCCATTCCTCGAAAGAAGT TTGAAGATCACGAGGCGTTT 20 20 50.0 45.0 57.9 57.8 4.1 0.0 0.279161 40383 41131 80-856 1.000000 84.8 psaA-ycf3_p3 psaA-ycf3 3 GCCCATTCCTCGAAAGAAGT TTGGTTGAAGATCACGAGGC 20 20 50.0 50.0 57.9 58.2 4.1 0.0 0.306932 40383 41131 80-860 1.000000 84.6 psaA-ycf3_p4 psaA-ycf3 4 GCCCATTCCTCGAAAGAAGT TGAAGATCACGAGGCGTTTC 20 20 50.0 50.0 57.9 58.3 4.1 0.0 0.405330 40383 41131 80-855 1.000000 83.8 psaA-ycf3_p5 psaA-ycf3 5 TTTGGCCCATTCCTCGAAAG TCACGAGGCGTTTCGAATAG 20 20 50.0 50.0 58.5 58.1 0.0 15.7 0.551132 40383 41131 80-853 1.000000 82.6 rpl20-rps12_p1 rpl20-rps12 1 CGGGCTATATATCCGCGTTT CGAGGAACATGTACTAGGGTG 20 21 50.0 52.4 57.7 57.6 4.9 0.0 1.727258 66373 67105 80-799 1.000000 70.4 rpl20-rps12_p2 rpl20-rps12 2 TCCGCGTTTAATTCTGGTCA CGAGGAACATGTACTAGGGTG 20 21 45.0 52.4 57.5 57.6 4.9 0.0 1.897357 66373 67105 80-788 1.000000 69.1 rpl20-rps12_p3 rpl20-rps12 3 TTTTTGTTCTACGCCTCCGG CGAGGAACATGTACTAGGGTG 20 21 50.0 52.4 58.5 57.6 0.0 0.0 1.923215 66373 67105 80-816 1.000000 68.7 rpl20-rps12_p4 rpl20-rps12 4 CGGGCTATATATCCGCGTTT CGAGGAACATGTACTAGGGT 20 20 50.0 50.0 57.7 56.1 4.9 0.0 2.222461 66373 67105 80-799 1.000000 66.4 rpl20-rps12_p5 rpl20-rps12 5 CCCCGAAAACTTGATGCAAA CGAGGAACATGTACTAGGGTG 20 21 45.0 52.4 57.2 57.6 0.0 0.0 2.248736 66373 67105 80-844 1.000000 66.1 psbT-psbN_p1 psbT-psbN 1 CGAGAACCACCTAAAGTTCCA GATCCATTCGAGGAACACGG 21 20 47.6 55.0 57.6 58.4 0.0 0.0 1.824342 71460 71532 80-133 1.000000 70.4 psbT-psbN_p2 psbT-psbN 2 CGAGAACCACCTAAAGTTCCA GGGTACGCCTTATATACCGC 21 20 47.6 55.0 57.6 57.7 0.0 0.0 1.680523 71460 71532 80-181 1.000000 70.3 psbT-psbN_p3 psbT-psbN 3 CGAGAACCACCTAAAGTTCCA GTTTTACCGGGTACGCCTTA 21 20 47.6 50.0 57.6 57.6 0.0 6.3 1.774705 71460 71532 80-189 1.000000 69.4 psbT-psbN_p4 psbT-psbN 4 CGAGAACCACCTAAAGTTCCA TAAGTTTTACCGGGTACGCC 21 20 47.6 50.0 57.6 57.6 0.0 6.3 1.774705 71460 71532 80-192 1.000000 69.3 psbT-psbN_p5 psbT-psbN 5 CGAGAACCACCTAAAGTTCCA CGGGTACGCCTTATATACCG 21 20 47.6 55.0 57.6 57.5 0.0 4.1 1.945894 71460 71532 80-182 1.000000 68.2 ndhF_p1 ndhF 1 ACAGGAACAAGAGGGATCCA AAAGAGGTAAGGTCCGGTGA 20 20 50.0 50.0 58.0 58.0 15.2 0.0 0.064600 106778 109006 80-2523 1.000000 82.8 ndhF_p2 ndhF 2 ACAGGAACAAGAGGGATCCA AAGAGGTAAGGTCCGGTGAA 20 20 50.0 50.0 58.0 58.0 15.2 0.0 0.064600 106778 109006 80-2522 1.000000 82.8 ndhF_p3 ndhF 3 AAGAGGGATCCACCGAAGAA AAGAGGTAAGGTCCGGTGAA 20 20 50.0 50.0 58.0 58.0 15.2 0.0 0.067186 106778 109006 80-2514 1.000000 82.7 ndhF_p4 ndhF 4 TGACAAATTCTACGGCTCGG AAAGAGGTAAGGTCCGGTGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.024390 106778 109006 80-2716 0.800000 74.4 ndhF_p5 ndhF 5 TGACAAATTCTACGGCTCGG AAGAGGTAAGGTCCGGTGAA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.024390 106778 109006 80-2715 0.800000 74.4 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 TCACCGGACCTTACCTCTTT AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 58.0 58.0 9.5 0.0 0.027638 109626 110127 80-1400 1.000000 87.7 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 TTCACCGGACCTTACCTCTT AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 58.0 58.0 9.5 0.0 0.027638 109626 110127 80-1401 1.000000 87.7 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 TCACCGGACCTTACCTCTTT CAGCGTGTCTACCGATTTCA 20 20 50.0 50.0 58.0 58.0 9.5 0.0 0.029008 109626 110127 80-1401 1.000000 87.7 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 TTCACCGGACCTTACCTCTT CAGCGTGTCTACCGATTTCA 20 20 50.0 50.0 58.0 58.0 9.5 0.0 0.029008 109626 110127 80-1402 1.000000 87.7 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 TCACCGGACCTTACCTCTTT TGATCCACATAAAAGGGCCG 20 20 50.0 50.0 58.0 57.9 9.5 0.0 0.071142 109626 110127 80-2000 1.000000 86.4 ccsA-ndhD_p1 ccsA-ndhD 1 CGGCCCTTTTATGTGGATCA GATATGGGACTCAACGGAGC 20 20 50.0 55.0 57.9 57.8 0.0 0.0 0.207677 111267 111447 80-1243 1.000000 82.2 ccsA-ndhD_p2 ccsA-ndhD 2 CGGCCCTTTTATGTGGATCA CTCAACGGAGCCCTTTTACA 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.230246 111267 111447 80-1234 1.000000 82.1 ccsA-ndhD_p3 ccsA-ndhD 3 CGGCCCTTTTATGTGGATCA ACTCAACGGAGCCCTTTTAC 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.231766 111267 111447 80-1235 1.000000 82.1 ccsA-ndhD_p4 ccsA-ndhD 4 TTGGCCCGAGTGCTATTTTT GATATGGGACTCAACGGAGC 20 20 45.0 55.0 58.1 57.8 0.0 0.0 0.238471 111267 111447 80-1381 1.000000 81.9 ccsA-ndhD_p5 ccsA-ndhD 5 CGGCCCTTTTATGTGGATCA TCTCTCGGTCAACGCAATTT 20 20 50.0 45.0 57.9 57.8 0.0 0.0 0.215152 111267 111447 80-1333 0.800000 73.5 ndhD_p1 ndhD 1 CGGCCCTTTTATGTGGATCA AGGACTGCGTTGGTTGTAAG 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.172381 111448 112968 80-2447 1.000000 82.0 ndhD_p2 ndhD 2 CGGCCCTTTTATGTGGATCA CCCTGGGATGGATGTAAAGC 20 20 50.0 55.0 57.9 58.0 0.0 7.0 0.064452 111448 112968 80-2494 0.700000 70.3 ndhD_p3 ndhD 3 AGTTGGGACCCAAAGGAAAC CCCTGGGATGGATGTAAAGC 20 20 50.0 55.0 57.9 58.0 27.9 7.0 0.095258 111448 112968 80-2174 0.700000 70.0 ndhD_p4 ndhD 4 GTTGGGACCCAAAGGAAACT CCCTGGGATGGATGTAAAGC 20 20 50.0 55.0 57.9 58.0 27.9 7.0 0.095258 111448 112968 80-2173 0.700000 70.0 ndhD_p5 ndhD 5 GAAGCGTGGGGATCCTATTG CCCTGGGATGGATGTAAAGC 20 20 55.0 55.0 58.1 58.0 12.6 7.0 0.128882 111448 112968 80-2195 0.700000 69.8 ndhD-psaC_p1 ndhD-psaC 1 GCAAGGAAAATGGTTCGTGG AAGAGATGTGAATCCGCCTG 20 20 50.0 50.0 57.9 57.7 0.0 0.0 0.386929 112969 113071 80-233 1.000000 82.4 ndhD-psaC_p2 ndhD-psaC 2 GCAAGGAAAATGGTTCGTGG GAGATGTGAATCCGCCTGTC 20 20 50.0 55.0 57.9 58.4 0.0 0.0 0.488218 112969 113071 80-231 1.000000 81.7 ndhD-psaC_p3 ndhD-psaC 3 GCAAGGAAAATGGTTCGTGG ATGGCATGAAACAACTCGCA 20 20 50.0 45.0 57.9 58.8 0.0 0.0 0.817924 112969 113071 80-180 1.000000 80.5 ndhD-psaC_p4 ndhD-psaC 4 GCAAGGAAAATGGTTCGTGG AGAGATGTGAATCCGCCTGT 20 20 50.0 50.0 57.9 58.8 0.0 0.0 0.865860 112969 113071 80-232 1.000000 78.6 ndhD-psaC_p5 ndhD-psaC 5 GCAAGGAAAATGGTTCGTGG TGTAAGAGATGTGAATCCGCC 20 21 50.0 47.6 57.9 57.8 0.0 0.0 1.244016 112969 113071 80-236 1.000000 75.5 ndhG-ndhI_p1 ndhG-ndhI 1 CCCAACCGTCCAAAGATGAA GAGGCCGAATCCACTTTGAA 20 20 50.0 50.0 58.1 58.2 0.0 0.0 0.274497 114615 114989 80-1010 1.000000 83.1 ndhG-ndhI_p2 ndhG-ndhI 2 ATGATCCCATACCAGGACGT GAGGCCGAATCCACTTTGAA 20 20 50.0 50.0 57.9 58.2 0.0 0.0 0.281937 114615 114989 80-1093 1.000000 82.6 ndhG-ndhI_p3 ndhG-ndhI 3 CCCAACCGTCCAAAGATGAA CTGCCAGGTACATTGGTCAA 20 20 50.0 50.0 58.1 57.8 0.0 14.8 0.294540 114615 114989 80-1118 1.000000 82.6 ndhG-ndhI_p4 ndhG-ndhI 4 CCCAACCGTCCAAAGATGAA TGCCAGGTACATTGGTCAAG 20 20 50.0 50.0 58.1 57.8 0.0 14.8 0.294540 114615 114989 80-1117 1.000000 82.6 ndhG-ndhI_p5 ndhG-ndhI 5 ATGATCCCATACCAGGACGT TGCCAGGTACATTGGTCAAG 20 20 50.0 50.0 57.9 57.8 0.0 14.8 0.301980 114615 114989 80-1200 1.000000 82.2 rps15-ycf1_p1 rps15-ycf1 1 ATCCGTTGACGTTTTCCCAA AGCAGCCAAGTTTCACATGA 20 20 45.0 45.0 58.0 58.0 2.6 0.0 0.044435 119244 119632 80-775 1.000000 85.1 rps15-ycf1_p2 rps15-ycf1 2 CAGCATCCGTTGACGTTTTC AGCAGCCAAGTTTCACATGA 20 20 50.0 45.0 58.0 58.0 2.6 0.0 0.064055 119244 119632 80-779 1.000000 84.9 rps15-ycf1_p3 rps15-ycf1 3 TGACAAATAGGCCAGCATCC AGCAGCCAAGTTTCACATGA 20 20 50.0 45.0 57.9 58.0 5.0 0.0 0.071664 119244 119632 80-791 1.000000 84.8 rps15-ycf1_p4 rps15-ycf1 4 ATCCGTTGACGTTTTCCCAA GCAGCCAAGTTTCACATGAC 20 20 45.0 50.0 58.0 57.9 2.6 0.0 0.086002 119244 119632 80-774 1.000000 84.8 rps15-ycf1_p5 rps15-ycf1 5 AACACCATGCATTGATGGGT AGCAGCCAAGTTTCACATGA 20 20 45.0 45.0 58.1 58.0 8.9 0.0 0.073150 119244 119632 80-1035 1.000000 83.9 ycf1_p1 ycf1 1 GCCCAAGGTTTTTGGCAATT CTCGAAACACGGACTCGATT 20 20 45.0 50.0 58.0 58.0 0.0 2.4 0.041604 122969 123088 80-1096 1.000000 85.0 ycf1_p2 ycf1 2 TTTGCCCCTTCTTGAACGAA CTCGAAACACGGACTCGATT 20 20 45.0 50.0 57.9 58.0 0.0 2.4 0.081508 122969 123088 80-585 0.900000 80.8 ycf1_p3 ycf1 3 AAAAGGGGAGTTCGGTTTCC CTCGAAACACGGACTCGATT 20 20 50.0 50.0 58.0 58.0 0.0 2.4 0.030337 122969 123088 80-1390 0.800000 75.9 ycf1_p4 ycf1 4 GAACAAAAGGGGAGTTCGGT CTCGAAACACGGACTCGATT 20 20 50.0 50.0 58.0 58.0 0.0 2.4 0.044402 122969 123088 80-1394 0.800000 75.8 ycf1_p5 ycf1 5 TGAACAAAAGGGGAGTTCGG CTCGAAACACGGACTCGATT 20 20 50.0 50.0 58.0 58.0 0.0 2.4 0.045799 122969 123088 80-1395 0.800000 75.8