primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score tRNA-Ser-tRNA-Gly_p1 tRNA-Ser-tRNA-Gly 1 ATTAGCAATCCGACGCGTTA TACCACTAAACCATACCCGC 20 20 45.0 50.0 57.8 57.0 15.5 0.0 1.198826 9330 10153 869-884 1.000000 77.9 tRNA-Ser-tRNA-Gly_p2 tRNA-Ser-tRNA-Gly 2 TTAGACCTCTCGGCCATCTC TACCACTAAACCATACCCGC 20 20 55.0 50.0 58.3 57.0 2.2 0.0 1.292331 9330 10153 852-867 1.000000 77.3 tRNA-Ser-tRNA-Gly_p3 tRNA-Ser-tRNA-Gly 3 TTAGCAATCCGACGCGTTAG TACCACTAAACCATACCCGC 20 20 50.0 50.0 58.4 57.0 15.5 0.0 1.433732 9330 10153 868-883 1.000000 76.0 tRNA-Ser-tRNA-Gly_p4 tRNA-Ser-tRNA-Gly 4 ATTAGCAATCCGACGCGTTA TTACCACTAAACCATACCCGC 20 21 45.0 47.6 57.8 57.7 15.5 0.0 1.477867 9330 10153 870-885 1.000000 75.7 tRNA-Ser-tRNA-Gly_p5 tRNA-Ser-tRNA-Gly 5 TTAGACCTCTCGGCCATCTC TTACCACTAAACCATACCCGC 20 21 55.0 47.6 58.3 57.7 2.2 0.0 1.571372 9330 10153 853-868 1.000000 75.1 tRNA-Gly-tRNA-Gly_p1 tRNA-Gly-tRNA-Gly 1 TTACTTTGTGGCGGGTATGG CCCGCATCATTAGCTTGGAA 20 20 50.0 50.0 57.9 58.3 0.0 0.0 0.437688 10177 11015 900-924 1.000000 84.6 tRNA-Gly-tRNA-Gly_p2 tRNA-Gly-tRNA-Gly 2 TTGTGGCGGGTATGGTTTAG CCCGCATCATTAGCTTGGAA 20 20 50.0 50.0 57.9 58.3 0.0 0.0 0.437688 10177 11015 895-919 1.000000 84.6 tRNA-Gly-tRNA-Gly_p3 tRNA-Gly-tRNA-Gly 3 TTACTTTGTGGCGGGTATGG ATCGAACCCGCATCATTAGC 20 20 50.0 50.0 57.9 58.5 0.0 0.0 0.603901 10177 11015 906-930 1.000000 83.2 tRNA-Gly-tRNA-Gly_p4 tRNA-Gly-tRNA-Gly 4 TTGTGGCGGGTATGGTTTAG ATCGAACCCGCATCATTAGC 20 20 50.0 50.0 57.9 58.5 0.0 0.0 0.603901 10177 11015 901-925 1.000000 83.2 tRNA-Gly-tRNA-Gly_p5 tRNA-Gly-tRNA-Gly 5 TTGTGGCGGGTATGGTTTAG AACCCGCATCATTAGCTTGG 20 20 50.0 50.0 57.9 58.6 0.0 0.0 0.724238 10177 11015 897-921 1.000000 82.3 tRNA-Gly-tRNA-Arg_p1 tRNA-Gly-tRNA-Arg 1 ACCCTTAGCCTTCCAAGCTA AGAAGACCTCTGTCCTATCCA 20 21 50.0 47.6 58.0 56.9 0.0 0.0 2.084759 11064 11207 230-233 1.000000 75.3 tRNA-Gly-tRNA-Arg_p2 tRNA-Gly-tRNA-Arg 2 ACCCTTAGCCTTCCAAGCTA AGGTTTAGAAGACCTCTGTCCT 20 22 50.0 45.5 58.0 57.9 0.0 0.0 2.168087 11064 11207 236-239 1.000000 74.7 tRNA-Gly-tRNA-Arg_p3 tRNA-Gly-tRNA-Arg 3 TTCCAAGCTAATGATGCGGG AGAAGACCTCTGTCCTATCCA 20 21 50.0 47.6 58.3 56.9 0.0 0.0 2.372466 11064 11207 220-223 1.000000 73.0 tRNA-Gly-tRNA-Arg_p4 tRNA-Gly-tRNA-Arg 4 TTCCAAGCTAATGATGCGGG AGGTTTAGAAGACCTCTGTCCT 20 22 50.0 45.5 58.3 57.9 0.0 0.0 2.455793 11064 11207 226-229 1.000000 72.4 tRNA-Gly-tRNA-Arg_p5 tRNA-Gly-tRNA-Arg 5 GCTAATGATGCGGGTTCGAT AGAAGACCTCTGTCCTATCCA 20 21 50.0 47.6 58.5 56.9 0.0 0.0 2.538678 11064 11207 214-217 1.000000 71.7 tRNA-Asp-tRNA-Tyr_p1 tRNA-Asp-tRNA-Tyr 1 TCAATTGGTTAGAGCACCGC CTCGAGTGGTTAATGGGGAC 20 20 50.0 55.0 58.6 57.7 5.4 3.6 0.862140 28787 28902 238-252 1.000000 83.6 tRNA-Asp-tRNA-Tyr_p2 tRNA-Asp-tRNA-Tyr 2 TCAATTGGTTAGAGCACCGC ATGCTCGAGTGGTTAATGGG 20 20 50.0 50.0 58.6 57.7 5.4 15.1 0.883079 28787 28902 241-255 1.000000 83.4 tRNA-Asp-tRNA-Tyr_p3 tRNA-Asp-tRNA-Tyr 3 GGTTCGAGACCCGTCAATC CTCGAGTGGTTAATGGGGAC 19 20 57.9 55.0 58.0 57.7 5.7 3.6 1.357404 28787 28902 197-211 1.000000 81.0 tRNA-Asp-tRNA-Tyr_p4 tRNA-Asp-tRNA-Tyr 4 GTTCGAGACCCGTCAATCC CTCGAGTGGTTAATGGGGAC 19 20 57.9 55.0 58.0 57.7 0.0 3.6 1.357404 28787 28902 196-210 1.000000 81.0 tRNA-Asp-tRNA-Tyr_p5 tRNA-Asp-tRNA-Tyr 5 GTTCGAGACCCGTCAATCC ATGCTCGAGTGGTTAATGGG 19 20 57.9 50.0 58.0 57.7 0.0 15.1 1.378343 28787 28902 199-213 1.000000 80.7 tRNA-Glu-tRNA-Cys_p1 tRNA-Glu-tRNA-Cys 1 TTGTCCTAGGCCTCTAGACG CATCCCCCAGTTCGAATCTG 20 20 55.0 55.0 57.9 58.0 9.7 16.2 0.095190 29234 30795 1541-1620 1.000000 91.2 tRNA-Glu-tRNA-Cys_p2 tRNA-Glu-tRNA-Cys 2 TTGTCCTAGGCCTCTAGACG TCATCCCCCAGTTCGAATCT 20 20 55.0 50.0 57.9 58.1 9.7 0.0 0.174657 29234 30795 1542-1621 1.000000 90.6 tRNA-Glu-tRNA-Cys_p3 tRNA-Glu-tRNA-Cys 3 TTGTCCTAGGCCTCTAGACG TTGCAAATCCTTCATCCCCC 20 20 55.0 50.0 57.9 58.1 9.7 0.0 0.189563 29234 30795 1553-1632 1.000000 90.5 tRNA-Glu-tRNA-Cys_p4 tRNA-Glu-tRNA-Cys 4 AGAGAGTTGTCCTAGGCCTC CATCCCCCAGTTCGAATCTG 20 20 55.0 55.0 57.8 58.0 9.7 16.2 0.193992 29234 30795 1547-1626 1.000000 90.4 tRNA-Glu-tRNA-Cys_p5 tRNA-Glu-tRNA-Cys 5 GAGAGTTGTCCTAGGCCTCT CATCCCCCAGTTCGAATCTG 20 20 55.0 55.0 57.8 58.0 9.7 16.2 0.193992 29234 30795 1546-1625 1.000000 90.4 tRNA-Cys-tRNA-Gly_p1 tRNA-Cys-tRNA-Gly 1 CAGATTCGAACTGGGGGATG GTTCGATTCCCGCTATCCG 20 19 55.0 57.9 58.0 58.2 15.7 0.0 1.230473 30868 31222 430-438 1.000000 82.2 tRNA-Cys-tRNA-Gly_p2 tRNA-Cys-tRNA-Gly 2 CAGATTCGAACTGGGGGATG GGGTTCGATTCCCGCTATC 20 19 55.0 57.9 58.0 57.8 15.7 9.9 1.253408 30868 31222 432-440 1.000000 82.0 tRNA-Cys-tRNA-Gly_p3 tRNA-Cys-tRNA-Gly 3 CAGATTCGAACTGGGGGATG GGTTCGATTCCCGCTATCC 20 19 55.0 57.9 58.0 57.8 15.7 0.0 1.253408 30868 31222 431-439 1.000000 82.0 tRNA-Cys-tRNA-Gly_p4 tRNA-Cys-tRNA-Gly 4 AGATTCGAACTGGGGGATGA GTTCGATTCCCGCTATCCG 20 19 50.0 57.9 58.1 58.2 0.0 0.0 1.309939 30868 31222 429-437 1.000000 81.5 tRNA-Cys-tRNA-Gly_p5 tRNA-Cys-tRNA-Gly 5 GGGGGATGAAGGATTTGCAA GTTCGATTCCCGCTATCCG 20 19 50.0 57.9 58.1 58.2 0.0 0.0 1.324845 30868 31222 418-426 1.000000 81.4 tRNA-Ser-tRNA-Thr_p1 tRNA-Ser-tRNA-Thr 1 TCTCCTTGCAATACTCACGC AGGGCCAGTATGTTTTGTGA 20 20 50.0 45.0 58.0 57.0 0.0 6.2 0.979966 36529 36648 796-796 0.500000 52.2 tRNA-Ser-tRNA-Thr_p2 tRNA-Ser-tRNA-Thr 2 TCGTATCGAATCCTCAGGCT AGGGCCAGTATGTTTTGTGA 20 20 50.0 45.0 58.0 57.0 0.0 6.2 0.987161 36529 36648 418-418 0.500000 52.1 tRNA-Ser-tRNA-Thr_p3 tRNA-Ser-tRNA-Thr 3 CGGCCTCGATCAGTAAGAAG AGGGCCAGTATGTTTTGTGA 20 20 55.0 45.0 57.9 57.0 0.0 6.2 1.096735 36529 36648 684-684 0.500000 51.2 tRNA-Ser-tRNA-Thr_p4 tRNA-Ser-tRNA-Thr 4 GGCCTCGATCAGTAAGAAGC AGGGCCAGTATGTTTTGTGA 20 20 55.0 45.0 58.1 57.0 0.0 6.2 1.110439 36529 36648 683-683 0.500000 51.1 tRNA-Ser-tRNA-Thr_p5 tRNA-Ser-tRNA-Thr 5 ACTACTGACTGGATGAGCCA AGGGCCAGTATGTTTTGTGA 20 20 50.0 45.0 57.8 57.0 0.0 6.2 1.207905 36529 36648 262-262 0.500000 50.3 tRNA-Ser-tRNA-Leu_p1 tRNA-Ser-tRNA-Leu 1 ATTGACTACCGGCTTGTCAC ATTGAGTCCGTTGCGTCTAC 20 20 50.0 50.0 57.9 58.0 19.8 0.0 0.102592 45434 47186 1951-1952 1.000000 87.1 tRNA-Ser-tRNA-Leu_p2 tRNA-Ser-tRNA-Leu 2 ACTACCGGCTTGTCACTTTG ATTGAGTCCGTTGCGTCTAC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.128877 45434 47186 1947-1948 1.000000 86.9 tRNA-Ser-tRNA-Leu_p3 tRNA-Ser-tRNA-Leu 3 ATTGACTACCGGCTTGTCAC CTGAATCTGGGAGCTGTCAC 20 20 50.0 55.0 57.9 58.0 19.8 0.0 0.116117 45434 47186 2002-2003 1.000000 86.7 tRNA-Ser-tRNA-Leu_p4 tRNA-Ser-tRNA-Leu 4 ATTGACTACCGGCTTGTCAC GTTGAGATGCAACGGAAAGC 20 20 50.0 50.0 57.9 58.0 19.8 0.0 0.125659 45434 47186 2269-2270 1.000000 86.6 tRNA-Ser-tRNA-Leu_p5 tRNA-Ser-tRNA-Leu 5 ACTACCGGCTTGTCACTTTG CTGAATCTGGGAGCTGTCAC 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.142402 45434 47186 1998-1999 1.000000 86.5 tRNA-Leu-tRNA-Phe_p1 tRNA-Leu-tRNA-Phe 1 GTGACAGCTCCCAGATTCAG GAAGAGTGGCTGTCAGTAGC 20 20 55.0 55.0 58.0 58.0 0.0 0.9 0.024552 47698 48045 1451-1468 1.000000 88.8 tRNA-Leu-tRNA-Phe_p2 tRNA-Leu-tRNA-Phe 2 GTAGACGCAACGGACTCAAT GAAGAGTGGCTGTCAGTAGC 20 20 50.0 55.0 58.0 58.0 0.0 0.9 0.011027 47698 48045 1502-1519 1.000000 88.6 tRNA-Leu-tRNA-Phe_p3 tRNA-Leu-tRNA-Phe 3 GTAGACGCAACGGACTCAAT GTGGTTTCAATTACCTGCGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.030642 47698 48045 1465-1482 1.000000 88.6 tRNA-Leu-tRNA-Phe_p4 tRNA-Leu-tRNA-Phe 4 GTAGACGCAACGGACTCAAT CGTCTAGCTCCTTGTCCAAC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.010161 47698 48045 1020-1020 0.500000 59.9 tRNA-Leu-tRNA-Phe_p5 tRNA-Leu-tRNA-Phe 5 GTGACAGCTCCCAGATTCAG CGTCTAGCTCCTTGTCCAAC 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.023686 47698 48045 969-969 0.500000 59.8 tRNA-Phe-tRNA-Val_p1 tRNA-Phe-tRNA-Val 1 GTTCAAGTCTGGTTCCTGGC GGTTCGAATCCGTATAGCCC 20 20 55.0 55.0 58.8 57.9 0.0 0.0 0.836632 48119 50489 2347-2414 1.000000 81.5 tRNA-Phe-tRNA-Val_p2 tRNA-Phe-tRNA-Val 2 GTTCAAGTCTGGTTCCTGGC CCGAGATTGTCTACGGTTCG 20 20 55.0 55.0 58.8 58.2 0.0 0.0 0.936825 48119 50489 2361-2428 1.000000 80.7 tRNA-Phe-tRNA-Val_p3 tRNA-Phe-tRNA-Val 3 AGTTCAAGTCTGGTTCCTGG GGTTCGAATCCGTATAGCCC 20 20 50.0 55.0 57.1 57.9 0.0 0.0 1.014935 48119 50489 2348-2415 1.000000 80.1 tRNA-Phe-tRNA-Val_p4 tRNA-Phe-tRNA-Val 4 CCAGTTCAAGTCTGGTTCCT GGTTCGAATCCGTATAGCCC 20 20 50.0 55.0 57.1 57.9 4.1 0.0 1.014935 48119 50489 2350-2417 1.000000 80.1 tRNA-Phe-tRNA-Val_p5 tRNA-Phe-tRNA-Val 5 GTTCAAGTCTGGTTCCTGGC TCTGCATGACCGAGATTGTC 20 20 55.0 50.0 58.8 57.7 0.0 0.0 1.060646 48119 50489 2370-2437 1.000000 79.6 tRNA-Ile-tRNA-Arg_p1 tRNA-Ile-tRNA-Arg 1 TGAACCTGTGAATTCGCCAA CAGAGGATTAGAGCACGTGG 20 20 45.0 55.0 58.0 57.8 16.1 18.9 0.241642 84201 84986 905-905 0.500000 58.1 tRNA-Ile-tRNA-Arg_p2 tRNA-Ile-tRNA-Arg 2 TTGAACCTGTGAATTCGCCA CAGAGGATTAGAGCACGTGG 20 20 45.0 55.0 58.0 57.8 16.1 18.9 0.241642 84201 84986 906-906 0.500000 58.1 tRNA-Ile-tRNA-Arg_p3 tRNA-Ile-tRNA-Arg 3 TAACCGTTCAGCCATGGATG CAGAGGATTAGAGCACGTGG 20 20 50.0 55.0 58.0 57.8 24.3 18.9 0.252865 84201 84986 868-868 0.500000 58.0 tRNA-Ile-tRNA-Arg_p4 tRNA-Ile-tRNA-Arg 4 TTGGGTGCTTTAACCGTTCA CAGAGGATTAGAGCACGTGG 20 20 45.0 55.0 57.9 57.8 0.0 18.9 0.270139 84201 84986 878-878 0.500000 57.8 tRNA-Ile-tRNA-Arg_p5 tRNA-Ile-tRNA-Arg 5 AGTTGGGTGCTTTAACCGTT CAGAGGATTAGAGCACGTGG 20 20 45.0 55.0 57.9 57.8 0.0 18.9 0.277416 84201 84986 880-880 0.500000 57.8 tRNA-Asn-tRNA-Pro_p1 tRNA-Asn-tRNA-Pro 1 TCATTCTCGTTTGTTTGCGC AGTTACGTGCGGTATGGAAC 20 20 45.0 50.0 58.0 58.0 0.0 5.4 0.031466 108817 108936 672-672 0.500000 59.7 tRNA-Asn-tRNA-Pro_p2 tRNA-Asn-tRNA-Pro 2 GAAACGTACTTCGGGTTCGA AGTTACGTGCGGTATGGAAC 20 20 50.0 50.0 57.9 58.0 13.0 5.4 0.050906 108817 108936 534-534 0.500000 59.6 tRNA-Asn-tRNA-Pro_p3 tRNA-Asn-tRNA-Pro 3 AGAAACGTACTTCGGGTTCG AGTTACGTGCGGTATGGAAC 20 20 50.0 50.0 57.9 58.0 0.0 5.4 0.056524 108817 108936 535-535 0.500000 59.5 tRNA-Asn-tRNA-Pro_p4 tRNA-Asn-tRNA-Pro 4 CTCAGCCCGGTCCATTTTAA AGTTACGTGCGGTATGGAAC 20 20 50.0 50.0 57.9 58.0 0.0 5.4 0.123213 108817 108936 450-450 0.500000 59.0 tRNA-Asn-tRNA-Pro_p5 tRNA-Asn-tRNA-Pro 5 TCAGCCCGGTCCATTTTAAG AGTTACGTGCGGTATGGAAC 20 20 50.0 50.0 57.9 58.0 0.0 5.4 0.123213 108817 108936 449-449 0.500000 59.0 tRNA-Pro-tRNA-Leu_p1 tRNA-Pro-tRNA-Leu 1 CGCTACCAAACTGCGCTATA TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 58.2 57.9 9.7 0.0 0.276459 109415 109631 276-281 1.000000 89.2 tRNA-Pro-tRNA-Leu_p2 tRNA-Pro-tRNA-Leu 2 CGCTACCAAACTGCGCTATA AGCAGCGTGTCTACCAATTT 20 20 50.0 45.0 58.2 57.8 9.7 0.0 0.337186 109415 109631 269-274 1.000000 88.8 tRNA-Pro-tRNA-Leu_p3 tRNA-Pro-tRNA-Leu 3 CGCTACCAAACTGCGCTATA CCTAAGAGCAGCGTGTCTAC 20 20 50.0 55.0 58.2 57.8 9.7 0.0 0.348477 109415 109631 275-280 1.000000 88.7 tRNA-Pro-tRNA-Leu_p4 tRNA-Pro-tRNA-Leu 4 CGCTACCAAACTGCGCTATA CTAAGAGCAGCGTGTCTACC 20 20 50.0 55.0 58.2 57.8 9.7 0.0 0.348477 109415 109631 274-279 1.000000 88.7 tRNA-Pro-tRNA-Leu_p5 tRNA-Pro-tRNA-Leu 5 CGCTACCAAACTGCGCTATA TAGGGCACTGCTTCCTAAGA 20 20 50.0 50.0 58.2 57.8 9.7 0.0 0.399881 109415 109631 288-293 1.000000 88.1 tRNA-Leu-tRNA-Asn_p1 tRNA-Leu-tRNA-Asn 1 GGCCTGCCTTTTTGCATAAG AAAGGAATCGCATACGGCAT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.047017 121623 121742 795-795 0.500000 59.6 tRNA-Leu-tRNA-Asn_p2 tRNA-Leu-tRNA-Asn 2 GGCCTGCCTTTTTGCATAAG AAGGAATCGCATACGGCATT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.047017 121623 121742 794-794 0.500000 59.6 tRNA-Leu-tRNA-Asn_p3 tRNA-Leu-tRNA-Asn 3 GGCCTGCCTTTTTGCATAAG AGGAATCGCATACGGCATTT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.047017 121623 121742 793-793 0.500000 59.6 tRNA-Leu-tRNA-Asn_p4 tRNA-Leu-tRNA-Asn 4 GGCCTGCCTTTTTGCATAAG TATGAGGGGGTTCTCTGCAA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.048921 121623 121742 872-872 0.500000 59.6 tRNA-Leu-tRNA-Asn_p5 tRNA-Leu-tRNA-Asn 5 GGCCTGCCTTTTTGCATAAG TTATGAGGGGGTTCTCTGCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.048921 121623 121742 873-873 0.500000 59.6