primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 CCTTTCAGGATCAGTCGTGG TCTATCCCAATGAGCCGTCT 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.103840 4199 4799 938-1066 1.000000 90.2 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 CCTTTCAGGATCAGTCGTGG AGCCGTCTATCGAATCGTTG 20 20 55.0 50.0 58.0 57.9 0.0 1.5 0.136852 4199 4799 926-1054 1.000000 90.1 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 TCAGGATCAGTCGTGGTCTT TCTATCCCAATGAGCCGTCT 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.163373 4199 4799 934-1062 1.000000 89.8 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 CCTTTCAGGATCAGTCGTGG TTGCGGCCATTTTTGAAAGG 20 20 55.0 45.0 58.0 58.1 0.0 2.2 0.139414 4199 4799 1407-1529 1.000000 89.5 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 CCTTTCAGGATCAGTCGTGG TCCGTTGTTCGCATGATTCT 20 20 55.0 45.0 58.0 57.9 0.0 0.0 0.109042 4199 4799 1462-1476 0.666667 66.1 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 5925 6482 628-669 1.000000 90.3 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 TCATGTCCTTCAAGTCGCAC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 0.0 16.9 0.280333 5925 6482 639-680 1.000000 89.8 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AAGTCGCACGTTGCTTTCTA TAAGGCATCGGGTTTTGGTC 20 20 45.0 50.0 58.1 58.2 8.1 0.0 0.310345 5925 6482 658-699 1.000000 89.5 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 TCATGTCCTTCAAGTCGCAC TAAGGCATCGGGTTTTGGTC 20 20 50.0 50.0 58.2 58.2 0.0 0.0 0.375253 5925 6482 669-710 1.000000 89.0 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AAGTCGCACGTTGCTTTCTA GTAAGGCATCGGGTTTTGGT 20 20 45.0 50.0 58.1 58.5 8.1 0.0 0.597945 5925 6482 659-700 1.000000 87.2 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 CACGAGCCCATATTCTTGCT CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.123086 26378 27523 1684-1749 1.000000 89.0 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 GAAAATACCGGGTCTCCACC CCGGATTTGAACTGGGGAAA 20 20 55.0 50.0 58.0 58.1 6.3 0.0 0.116232 26378 27523 1889-1954 1.000000 88.1 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 CCCGGGCTTTGCAATATTTG ATAGGAATGGGGAGGTCTCG 20 20 50.0 55.0 58.1 58.0 8.1 0.0 0.078279 26378 27523 1798-1857 0.888889 84.2 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 CACGAGCCCATATTCTTGCT ATAGGAATGGGGAGGTCTCG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.057863 26378 27523 1920-1979 0.888889 83.9 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 GAAAATACCGGGTCTCCACC ATAGGAATGGGGAGGTCTCG 20 20 55.0 55.0 58.0 58.0 6.3 0.0 0.051009 26378 27523 2125-2184 0.888889 83.2 trnD-GUC-trnY-GUA_p1 trnD-GUC-trnY-GUA 1 GCGGTGCTCTAACCAATTGA TGGCAATATGTCTACGCTGG 20 20 50.0 50.0 58.6 57.8 7.1 0.0 0.789957 29980 30382 451-474 1.000000 85.7 trnD-GUC-trnY-GUA_p2 trnD-GUC-trnY-GUA 2 GCGGTGCTCTAACCAATTGA GGCAATATGTCTACGCTGGT 20 20 50.0 50.0 58.6 57.8 7.1 0.0 0.791509 29980 30382 450-473 1.000000 85.7 trnD-GUC-trnY-GUA_p3 trnD-GUC-trnY-GUA 3 GCGGTGCTCTAACCAATTGA GGGGACGGACTGTAAATTCG 20 20 50.0 55.0 58.6 58.4 7.1 0.0 0.902511 29980 30382 472-495 1.000000 84.8 trnD-GUC-trnY-GUA_p4 trnD-GUC-trnY-GUA 4 GCGGTGCTCTAACCAATTGA GGGACGGACTGTAAATTCGT 20 20 50.0 50.0 58.6 57.6 7.1 0.0 0.926188 29980 30382 471-494 1.000000 84.6 trnD-GUC-trnY-GUA_p5 trnD-GUC-trnY-GUA 5 GCGGTGCTCTAACCAATTGA CGGACTGTAAATTCGTTGGC 20 20 50.0 50.0 58.6 57.5 7.1 0.0 1.071702 29980 30382 467-490 1.000000 83.4 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 AGAGATGTCCTGAACCGCTA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.151367 30608 31027 507-537 1.000000 88.9 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 AGATGTCCTGAACCGCTAGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.151367 30608 31027 505-535 1.000000 88.9 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 AGAGATGTCCTGAACCGCTA CCATGGCGTTACTCTACCAC 20 20 50.0 55.0 57.9 58.1 0.0 0.0 0.209464 30608 31027 486-516 1.000000 88.9 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 AGATGTCCTGAACCGCTAGA CCATGGCGTTACTCTACCAC 20 20 50.0 55.0 57.9 58.1 0.0 0.0 0.209464 30608 31027 484-514 1.000000 88.9 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 GATGTCCTGAACCGCTAGAC GAACCGATGACTTACGCCTT 20 20 55.0 50.0 57.8 58.0 0.0 0.0 0.217323 30608 31027 504-534 1.000000 88.4 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GTGGTAGAGTAACGCCATGG CGTAACCAGTCATCCATAACA 20 21 55.0 42.9 58.1 55.4 7.6 0.0 3.635281 31110 32409 1438-1483 1.000000 60.5 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 TCAGTGGTAGAGTAACGCCA CGTAACCAGTCATCCATAACA 20 21 50.0 42.9 58.1 55.4 0.0 0.0 3.657435 31110 32409 1441-1486 1.000000 60.4 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 GGCGTAAGTCATCGGTTCAA CGTAACCAGTCATCCATAACA 20 21 50.0 42.9 58.3 55.4 0.0 0.0 3.854019 31110 32409 1415-1460 1.000000 58.9 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 CCGATAAGGGGCTTTTGAGG CGTAACCAGTCATCCATAACA 20 21 55.0 42.9 58.3 55.4 0.0 0.0 3.890875 31110 32409 1393-1438 1.000000 58.7 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 GTGGTAGAGTAACGCCATGG CGTAACCAGTCATCCATAACATC 20 23 55.0 43.5 58.1 57.1 7.6 0.0 3.971265 31110 32409 1438-1483 1.000000 57.9 rps4-trnT-UGU_p1 rps4-trnT-UGU 1 AGTCCAGGTAAAGCCCCTAG CTCAGAGGTTAGAGCATCGC 20 20 55.0 55.0 58.1 57.9 0.0 0.0 0.251799 45835 46268 535-567 1.000000 89.2 rps4-trnT-UGU_p2 rps4-trnT-UGU 2 GTCCAGGTAAAGCCCCTAGA CTCAGAGGTTAGAGCATCGC 20 20 55.0 55.0 58.1 57.9 0.0 0.0 0.257252 45835 46268 534-566 1.000000 89.2 rps4-trnT-UGU_p3 rps4-trnT-UGU 3 TCCAGGTAAAGCCCCTAGAC CTCAGAGGTTAGAGCATCGC 20 20 55.0 55.0 58.1 57.9 0.0 0.0 0.257252 45835 46268 533-565 1.000000 89.2 rps4-trnT-UGU_p4 rps4-trnT-UGU 4 AGTCCAGGTAAAGCCCCTAG ATGGTCATCGGTTCGATTCC 20 20 55.0 50.0 58.1 57.8 0.0 0.0 0.359553 45835 46268 503-535 1.000000 88.8 rps4-trnT-UGU_p5 rps4-trnT-UGU 5 TCCAGGTAAAGCCCCTAGAC ATGGTCATCGGTTCGATTCC 20 20 55.0 50.0 58.1 57.8 0.0 0.0 0.365005 45835 46268 501-533 1.000000 88.8 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG AGCCAATTAAGTCCGTAGCG 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.196808 46342 47038 532-770 1.000000 88.8 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GGAATCGAACCGATGACCAT AGCCAATTAAGTCCGTAGCG 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.304561 46342 47038 564-802 1.000000 87.7 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GCGATGCTCTAACCTCTGAG CCGTAGCGTCTACCGATTTC 20 20 55.0 55.0 57.9 58.2 0.0 10.2 0.381189 46342 47038 520-758 1.000000 87.4 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GCGATGCTCTAACCTCTGAG GCCAATTAAGTCCGTAGCGT 20 20 55.0 50.0 57.9 58.4 0.0 0.0 0.484236 46342 47038 531-769 1.000000 86.5 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GGAATCGAACCGATGACCAT CCGTAGCGTCTACCGATTTC 20 20 50.0 55.0 57.8 58.2 15.5 10.2 0.488942 46342 47038 552-790 1.000000 86.3 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 CCTCGTGTCACCAGTTCAAA ATGAAATACAAGATGCTTATTGA 20 23 50.0 26.1 58.1 52.2 0.0 13.3 8.822066 48134 48804 727-757 1.000000 49.5 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 CTGGTAGAGCAGAGGACTGA ATGAAATACAAGATGCTTATTGA 20 23 55.0 26.1 57.9 52.2 2.5 13.3 8.906468 48134 48804 751-781 1.000000 49.2 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 GGGATAGCTCAGCTGGTAGA ATGAAATACAAGATGCTTATTGA 20 23 55.0 26.1 58.0 52.2 10.3 13.3 8.772675 48134 48804 763-793 1.000000 49.1 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 AAGGGTGAATGAATGGTCGG ATGAAATACAAGATGCTTATTGA 20 23 50.0 26.1 57.9 52.2 0.0 13.3 8.898941 48134 48804 781-811 1.000000 48.9 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 TGAGAAGATGATGCGCCAAA ATGAAATACAAGATGCTTATTGA 20 23 45.0 26.1 57.9 52.2 4.2 13.3 8.882550 48134 48804 800-834 1.000000 48.7 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 AGCGGCCATAAACTTGAGAG AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 58.0 57.8 2.2 0.0 0.227121 50504 51253 1315-1339 1.000000 86.2 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 GGGTCCTTTGCTATTCGGAG AGAAGGTCTACGGTTCGAGT 20 20 55.0 50.0 58.0 57.8 0.0 0.0 0.242356 50504 51253 897-921 0.888889 83.7 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 AGCGGCCATAAACTTGAGAG GGAGCATAAACACAAGGGCT 20 20 50.0 50.0 58.0 58.2 2.2 0.0 0.190415 50504 51253 1967-1985 0.888889 80.2 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 TGGTTCAGGCATTTGCTCAT GGAGCATAAACACAAGGGCT 20 20 45.0 50.0 58.1 58.2 2.1 0.0 0.233089 50504 51253 2154-2172 0.888889 79.5 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 GGGTCCTTTGCTATTCGGAG GGAGCATAAACACAAGGGCT 20 20 55.0 50.0 58.0 58.2 0.0 0.0 0.205649 50504 51253 1549-1566 0.777778 76.1 psbE-petL_p1 psbE-petL 1 AGAACGTTCTCCTGTGCTTC AAATAACTAGTTAGAGTAGGCAT 20 23 50.0 30.4 57.8 52.4 24.9 19.6 8.749230 64557 65703 1193-1309 1.000000 50.7 psbE-petL_p2 psbE-petL 2 CAACCCGCAATGAATAGGGA AAATAACTAGTTAGAGTAGGCAT 20 23 50.0 30.4 57.9 52.4 6.4 19.6 8.644221 64557 65703 1270-1386 1.000000 50.3 psbE-petL_p3 psbE-petL 3 ACGAATAACCAACCCGCAAT AAATAACTAGTTAGAGTAGGCAT 20 23 45.0 30.4 58.2 52.4 0.0 19.6 8.763907 64557 65703 1279-1395 1.000000 50.2 psbE-petL_p4 psbE-petL 4 TGCTGACGAATAACCAACCC AAATAACTAGTTAGAGTAGGCAT 20 23 50.0 30.4 58.2 52.4 0.0 19.6 8.776812 64557 65703 1284-1400 1.000000 50.2 psbE-petL_p5 psbE-petL 5 CGAATAACCAACCCGCAATG AAATAACTAGTTAGAGTAGGCAT 20 23 50.0 30.4 57.8 52.4 0.0 19.6 8.780238 64557 65703 1278-1394 1.000000 50.2 trnN-GUU-ycf1_p1 trnN-GUU-ycf1 1 CGGGAGAATCAATGACTGCA AACCTGAGTTCGGAGAAGGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.039542 107359 107873 882-1002 1.000000 90.5 trnN-GUU-ycf1_p2 trnN-GUU-ycf1 2 CGGGAGAATCAATGACTGCA ACCTGAGTTCGGAGAAGGAA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.039542 107359 107873 881-1001 1.000000 90.5 trnN-GUU-ycf1_p3 trnN-GUU-ycf1 3 CGGGAGAATCAATGACTGCA CGGAGAAGGAAGAAATGCGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.038565 107359 107873 929-992 0.666667 70.6 trnN-GUU-ycf1_p4 trnN-GUU-ycf1 4 CGGGAGAATCAATGACTGCA TCGGAGAAGGAAGAAATGCG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.038565 107359 107873 930-993 0.666667 70.6 trnN-GUU-ycf1_p5 trnN-GUU-ycf1 5 CGGGAGAATCAATGACTGCA CCGTAACGACCGAATTGACT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.041722 107359 107873 865-928 0.666667 70.6 ndhF-rpl32_p1 ndhF-rpl32 1 GCAATAGGTCGTGTGAACCA AAAAGGCTTTTAACGCTGCC 20 20 50.0 45.0 58.2 57.9 0.0 23.0 0.345581 111842 112954 1709-1738 1.000000 87.8 ndhF-rpl32_p2 ndhF-rpl32 2 GCCCATATACGCCGAAGATT AAAAGGCTTTTAACGCTGCC 20 20 50.0 45.0 57.9 57.9 0.0 23.0 0.243678 111842 112954 1319-1348 0.888889 84.3 ndhF-rpl32_p3 ndhF-rpl32 3 AAAGCCCATATACGCCGAAG AAAAGGCTTTTAACGCTGCC 20 20 50.0 45.0 58.1 57.9 0.0 23.0 0.269963 111842 112954 1322-1351 0.888889 84.0 ndhF-rpl32_p4 ndhF-rpl32 4 ATGAAGGGGAAATTGGGCAG AAAAGGCTTTTAACGCTGCC 20 20 50.0 45.0 58.1 57.9 0.0 23.0 0.278851 111842 112954 1951-1967 0.666667 65.0 ndhF-rpl32_p5 ndhF-rpl32 5 GAAGGGGAAATTGGGCAGAT AAAAGGCTTTTAACGCTGCC 20 20 50.0 45.0 57.8 57.9 0.0 23.0 0.314273 111842 112954 1949-1965 0.666667 64.7 ycf1_p1 ycf1 1 AGTTCCGGACTCAATTCGTG AATCAACATTGAGGCCTGGG 20 20 50.0 50.0 57.9 58.1 1.8 12.0 0.223657 124401 124550 672-672 0.666667 65.5 ycf1_p2 ycf1 2 CCCATAGTCTCACCCCATCT AATCAACATTGAGGCCTGGG 20 20 55.0 50.0 57.9 58.1 0.0 12.0 0.252600 124401 124550 561-561 0.666667 65.2 ycf1_p3 ycf1 3 TCGCAATTCTCTACGACGTC AATCAACATTGAGGCCTGGG 20 20 50.0 50.0 57.8 58.1 2.4 12.0 0.313034 124401 124550 931-931 0.666667 64.8 ycf1_p4 ycf1 4 CGCAATTCTCTACGACGTCT AATCAACATTGAGGCCTGGG 20 20 50.0 50.0 57.8 58.1 14.7 12.0 0.318901 124401 124550 930-930 0.666667 64.8 ycf1_p5 ycf1 5 ACCCATAGTCTCACCCCATC AATCAACATTGAGGCCTGGG 20 20 55.0 50.0 58.2 58.1 0.0 12.0 0.335557 124401 124550 562-562 0.666667 64.6 ycf1-trnN-GUU_p1 ycf1-trnN-GUU 1 AACCTGAGTTCGGAGAAGGA CGGGAGAATCAATGACTGCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.039542 129076 129590 882-1002 1.000000 90.5 ycf1-trnN-GUU_p2 ycf1-trnN-GUU 2 ACCTGAGTTCGGAGAAGGAA CGGGAGAATCAATGACTGCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.039542 129076 129590 881-1001 1.000000 90.5 ycf1-trnN-GUU_p3 ycf1-trnN-GUU 3 CGGAGAAGGAAGAAATGCGA CGGGAGAATCAATGACTGCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.038565 129076 129590 929-992 0.666667 70.6 ycf1-trnN-GUU_p4 ycf1-trnN-GUU 4 TCGGAGAAGGAAGAAATGCG CGGGAGAATCAATGACTGCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.038565 129076 129590 930-993 0.666667 70.6 ycf1-trnN-GUU_p5 ycf1-trnN-GUU 5 CCGTAACGACCGAATTGACT CGGGAGAATCAATGACTGCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.041722 129076 129590 865-928 0.666667 70.6