primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps16_p1 rps16 1 AGCTTGTTACGTTAAGAAGACA TCTTATATGCATGCTTATACGT 22 22 36.4 31.8 55.7 53.0 14.4 25.1 11.299175 5572 5691 278-476 1.000000 40.6 rps16_p2 rps16 2 AAGCTTGTTACGTTAAGAAGACA TCTTATATGCATGCTTATACGT 23 22 34.8 31.8 56.4 53.0 0.0 25.1 11.586413 5572 5691 279-477 1.000000 40.6 rps16_p3 rps16 3 AGCTTGTTACGTTAAGAAGACAA TCTTATATGCATGCTTATACGT 23 22 34.8 31.8 56.4 53.0 14.4 25.1 11.586413 5572 5691 278-476 1.000000 40.6 rps16_p4 rps16 4 AGCTTGTTACGTTAAGAAGACA ATCTTATATGCATGCTTATACGT 22 23 36.4 30.4 55.7 53.6 14.4 25.1 11.673685 5572 5691 279-477 1.000000 40.6 rps16_p5 rps16 5 GCTTGTTACGTTAAGAAGACA TCTTATATGCATGCTTATACGT 21 22 38.1 31.8 54.2 53.0 14.4 25.1 11.799926 5572 5691 277-475 1.000000 40.6 trnQ-UUG-trnG-UCC_p1 trnQ-UUG-trnG-UCC 1 GTCCAGTCATTCGGAGGTTC CATCGTTAGCTTGGAAGGCT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.041378 11274 13355 2229-2229 1.000000 79.7 trnQ-UUG-trnG-UCC_p2 trnQ-UUG-trnG-UCC 2 GTCCAGTCATTCGGAGGTTC CGTTAGCTTGGAAGGCTAGG 20 20 55.0 55.0 58.0 58.1 0.0 0.0 0.070215 11274 13355 2226-2226 1.000000 79.5 trnQ-UUG-trnG-UCC_p3 trnQ-UUG-trnG-UCC 3 GAGGTTCGAATCCTTCCGTC CATCGTTAGCTTGGAAGGCT 20 20 55.0 50.0 58.1 58.0 16.9 0.0 0.105939 11274 13355 2216-2216 1.000000 79.2 trnQ-UUG-trnG-UCC_p4 trnQ-UUG-trnG-UCC 4 GAGGTTCGAATCCTTCCGTC CGTTAGCTTGGAAGGCTAGG 20 20 55.0 55.0 58.1 58.1 16.9 0.0 0.134776 11274 13355 2213-2213 1.000000 79.0 trnQ-UUG-trnG-UCC_p5 trnQ-UUG-trnG-UCC 5 GTCCAGTCATTCGGAGGTTC GTTAGCTTGGAAGGCTAGGG 20 20 55.0 55.0 58.0 57.7 0.0 0.0 0.345228 11274 13355 2225-2225 1.000000 77.3 rpoC2_p1 rpoC2 1 TTATATGGGGCTAGGGGTCG TCCCGAGGAAGTGCATATCT 20 20 55.0 50.0 58.1 57.9 0.0 0.0 0.141120 22971 23090 852-900 1.000000 84.3 rpoC2_p2 rpoC2 2 ATGTCGGGTAAGTGAGGGAA TCCCGAGGAAGTGCATATCT 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.141120 22971 23090 1261-1309 1.000000 83.9 rpoC2_p3 rpoC2 3 TGTCGGGTAAGTGAGGGAAT TCCCGAGGAAGTGCATATCT 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.141120 22971 23090 1260-1308 1.000000 83.9 rpoC2_p4 rpoC2 4 TTATATGGGGCTAGGGGTCG TTTCATTCCCGAGGAAGTGC 20 20 55.0 50.0 58.1 58.2 0.0 10.5 0.231799 22971 23090 858-906 1.000000 83.6 rpoC2_p5 rpoC2 5 TGTCGGGTAAGTGAGGGAAT TTTCATTCCCGAGGAAGTGC 20 20 50.0 50.0 58.1 58.2 0.0 10.5 0.231799 22971 23090 1266-1314 1.000000 83.1 psbM-trnD-GUC_p1 psbM-trnD-GUC 1 TGCGAGAATATTGACTTCCA TATTGTACGGCTCATGGGGA 20 20 40.0 50.0 54.5 58.2 0.0 0.0 3.723530 35878 36740 974-974 1.000000 50.3 psbM-trnD-GUC_p2 psbM-trnD-GUC 2 TGCGAGAATATTGACTTCCA GCTCATGGGGACTGTAGTTC 20 20 40.0 55.0 54.5 57.7 0.0 0.0 3.837076 35878 36740 965-965 1.000000 49.4 psbM-trnD-GUC_p3 psbM-trnD-GUC 3 TGCGAGAATATTGACTTCCA AGTTCAATTGGTCAGAGCGT 20 20 40.0 45.0 54.5 57.4 0.0 5.4 4.070377 35878 36740 950-950 1.000000 47.5 psbM-trnD-GUC_p4 psbM-trnD-GUC 4 TGCGAGAATATTGACTTCCA TTCAATTGGTCAGAGCGTCG 20 20 40.0 50.0 54.5 58.6 0.0 5.4 4.091098 35878 36740 948-948 1.000000 47.4 psbM-trnD-GUC_p5 psbM-trnD-GUC 5 TGCGAGAATATTGACTTCCAT TATTGTACGGCTCATGGGGA 21 20 38.1 50.0 55.1 58.2 0.0 0.0 4.106257 35878 36740 974-974 1.000000 47.2 ycf3_p1 ycf3 1 CTTGATTGGACCCTCTCAGG TATGAGATCGTTTTCCCGGG 20 20 55.0 50.0 57.3 57.1 0.0 16.9 1.609044 49508 51493 2128-2128 1.000000 67.2 ycf3_p2 ycf3 2 CTTGATTGGACCCTCTCAGG TTATGAGATCGTTTTCCCGGG 20 21 55.0 47.6 57.3 57.8 0.0 16.9 1.894498 49508 51493 2129-2129 1.000000 64.9 ycf3_p3 ycf3 3 CTTGATTGGACCCTCTCAGG ATGAGATCGTTTTCCCGGG 20 19 55.0 52.6 57.3 57.2 0.0 16.9 2.486963 49508 51493 2127-2127 1.000000 60.1 ycf3_p4 ycf3 4 CTTGATTGGACCCTCTCAGG ATGAGATCGTTTTCCCGGGG 20 20 55.0 55.0 57.3 59.8 0.0 23.5 2.525933 49508 51493 2127-2127 1.000000 59.8 ycf3_p5 ycf3 5 TCTTGATTGGACCCTCTCAG TATGAGATCGTTTTCCCGGG 20 20 50.0 50.0 56.2 57.1 0.0 16.9 2.658121 49508 51493 2129-2129 1.000000 58.8 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 AAAGCCAGCTATCGGAATCG ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.133544 53777 56369 2686-2688 1.000000 79.0 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 AAAGCCAGCTATCGGAATCG TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.198352 53777 56369 2694-2696 1.000000 78.5 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 53777 56369 2673-2675 1.000000 78.1 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 53777 56369 2681-2683 1.000000 77.6 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 AAATGCGATGCTCTAACCCC ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.3 58.0 0.0 0.0 0.324286 53777 56369 2645-2647 1.000000 77.5 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 CCTCGTGTCACCAGTTCAAA GTTGGATCGGTTGGCCTTTA 20 20 50.0 50.0 58.1 58.2 0.0 3.3 0.222916 57597 58251 760-760 1.000000 78.3 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 CCTCGTGTCACCAGTTCAAA TTGGATCGGTTGGCCTTTAC 20 20 50.0 50.0 58.1 58.2 0.0 3.3 0.222916 57597 58251 759-759 1.000000 78.3 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 CCTCGTGTCACCAGTTCAAA GATCGGTTGGCCTTTACGTA 20 20 50.0 50.0 58.1 57.7 0.0 3.3 0.350307 57597 58251 756-756 1.000000 77.3 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 CCTCGTGTCACCAGTTCAAA AGTCATCCGCGACTTAAACG 20 20 50.0 50.0 58.1 58.4 0.0 8.2 0.426280 57597 58251 797-797 1.000000 76.7 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 TCGGGATAGCTCAGTTGGTA TTGGATCGGTTGGCCTTTAC 20 20 50.0 50.0 57.6 58.2 0.0 3.3 0.618429 57597 58251 797-797 1.000000 75.2 accD-psaI_p1 accD-psaI 1 CACGGGTTCCTTCCTTTGAA CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 58.0 58.0 0.0 26.9 0.051344 69322 70613 1401-1401 1.000000 79.8 accD-psaI_p2 accD-psaI 2 CACGGGTTCCTTCCTTTGAA AAGAAGCCATTGCAATTGCC 20 20 50.0 45.0 58.0 57.9 0.0 26.8 0.127877 69322 70613 1407-1407 1.000000 79.1 accD-psaI_p3 accD-psaI 3 GTTATTTCAGCTCCACGGGT CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 57.9 58.0 0.0 26.9 0.136428 69322 70613 1414-1414 1.000000 79.1 accD-psaI_p4 accD-psaI 4 CCTCATCGTACCACGGAATC CCATTGCAATTGCCGGAAAT 20 20 55.0 45.0 57.9 58.0 0.0 26.9 0.162668 69322 70613 1456-1456 1.000000 78.9 accD-psaI_p5 accD-psaI 5 GTTATTTCAGCTCCACGGGT AAGAAGCCATTGCAATTGCC 20 20 50.0 45.0 57.9 57.9 0.0 26.8 0.212962 69322 70613 1420-1420 1.000000 78.5 psbE-petL_p1 psbE-petL 1 ACTGACGAATAACCAACCCG AAGCAGCCAGTAGAAAACCA 20 20 50.0 45.0 57.9 57.3 0.0 0.0 0.745897 75521 76709 1349-1349 1.000000 74.1 psbE-petL_p2 psbE-petL 2 ACTGACGAATAACCAACCCG AGCAGCCAGTAGAAAACCAA 20 20 50.0 45.0 57.9 57.3 0.0 0.0 0.745897 75521 76709 1348-1348 1.000000 74.1 psbE-petL_p3 psbE-petL 3 AATAACCAACCCGCGATGAA AAGCAGCCAGTAGAAAACCA 20 20 45.0 45.0 57.9 57.3 8.2 0.0 0.773774 75521 76709 1342-1342 1.000000 73.9 psbE-petL_p4 psbE-petL 4 AATAACCAACCCGCGATGAA AGCAGCCAGTAGAAAACCAA 20 20 45.0 45.0 57.9 57.3 8.2 0.0 0.773774 75521 76709 1341-1341 1.000000 73.9 psbE-petL_p5 psbE-petL 5 AACCAACCCGCGATGAATAG AGCAGCCAGTAGAAAACCAA 20 20 50.0 45.0 58.3 57.3 8.2 0.0 0.993253 75521 76709 1338-1338 1.000000 72.1 rpoA_p1 rpoA 1 AGAAAAAGGAATTGCAAAGGA GCAACCCCTATGCCACATAA 21 20 33.3 50.0 54.1 57.9 1.7 0.0 4.923789 89628 90662 1144-1144 1.000000 40.7 rpoA_p2 rpoA 2 AAGAAAAAGGAATTGCAAAGGA GCAACCCCTATGCCACATAA 22 20 31.8 50.0 55.0 57.9 1.7 0.0 5.093508 89628 90662 1145-1145 1.000000 40.1 rpoA_p3 rpoA 3 AGAAAAAGGAATTGCAAAGGA ACCCCCTAAAAGAAGGCGTA 21 20 33.3 50.0 54.1 58.3 1.7 0.0 5.197648 89628 90662 1115-1115 1.000000 40.1 rpoA_p4 rpoA 4 AGAAAAAGGAATTGCAAAGGAT GCAACCCCTATGCCACATAA 22 20 31.8 50.0 54.8 57.9 1.7 0.0 5.312470 89628 90662 1144-1144 1.000000 40.1 rpoA_p5 rpoA 5 AAAGAAAAAGGAATTGCAAAGGA GCAACCCCTATGCCACATAA 23 20 30.4 50.0 55.7 57.9 1.7 0.0 5.335661 89628 90662 1146-1146 1.000000 40.1 rpl22-rps19_p1 rpl22-rps19 1 TTTGACTTCTACGCCCGATG ACCTACTCGAACTTTTGGCG 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.212577 95995 97187 1254-1290 1.000000 82.5 rpl22-rps19_p2 rpl22-rps19 2 AACTTTGACTTCTACGCCCG ACCTACTCGAACTTTTGGCG 20 20 50.0 50.0 58.2 58.2 0.0 0.0 0.415988 95995 97187 1257-1293 1.000000 80.9 rpl22-rps19_p3 rpl22-rps19 3 GCCCGCGAATTTGATCAATC ACCTACTCGAACTTTTGGCG 20 20 50.0 50.0 58.2 58.2 8.2 0.0 0.449211 95995 97187 1321-1357 1.000000 80.6 rpl22-rps19_p4 rpl22-rps19 4 TGACTTCTACGCCCGATGTA ACCTACTCGAACTTTTGGCG 20 20 50.0 50.0 58.2 58.2 0.0 0.0 0.454064 95995 97187 1252-1288 1.000000 80.6 rpl22-rps19_p5 rpl22-rps19 5 CTTTGGGCTTTGAAAGGGGA ACCTACTCGAACTTTTGGCG 20 20 50.0 50.0 58.3 58.2 7.1 0.0 0.492209 95995 97187 1298-1334 1.000000 80.2 trnN-GUU-ycf1_p1 trnN-GUU-ycf1 1 CTACGGCCAATCGGTTAACA CAGAATGAGCTCAGGAACCC 20 20 50.0 55.0 58.0 58.0 8.1 23.0 0.048467 122258 123061 904-962 1.000000 83.6 trnN-GUU-ycf1_p2 trnN-GUU-ycf1 2 TACGGCCAATCGGTTAACAG CAGAATGAGCTCAGGAACCC 20 20 50.0 55.0 58.0 58.0 8.1 23.0 0.048467 122258 123061 903-961 1.000000 83.6 trnN-GUU-ycf1_p3 trnN-GUU-ycf1 3 ATTCGAACCTACGGCCAATC CAGAATGAGCTCAGGAACCC 20 20 50.0 55.0 58.1 58.0 2.2 23.0 0.086065 122258 123061 912-970 1.000000 83.3 trnN-GUU-ycf1_p4 trnN-GUU-ycf1 4 GATTCGAACCTACGGCCAAT CAGAATGAGCTCAGGAACCC 20 20 50.0 55.0 58.1 58.0 2.2 23.0 0.086065 122258 123061 913-971 1.000000 83.3 trnN-GUU-ycf1_p5 trnN-GUU-ycf1 5 GTAGGATTCGAACCTACGGC CAGAATGAGCTCAGGAACCC 20 20 55.0 55.0 57.9 58.0 26.6 23.0 0.166811 122258 123061 917-975 1.000000 82.7 ndhF-rpl32_p1 ndhF-rpl32 1 GGAACAAGCAGGAGTCCAAA ACGAAAAAGCTTTAACGGCG 20 20 50.0 45.0 58.0 58.0 12.9 28.2 0.045658 133902 135251 1538-1539 1.000000 79.7 ndhF-rpl32_p2 ndhF-rpl32 2 AGCAGGAGTCCAAACCCTAT ACGAAAAAGCTTTAACGGCG 20 20 50.0 45.0 58.0 58.0 12.9 28.2 0.054327 133902 135251 1532-1533 1.000000 79.6 ndhF-rpl32_p3 ndhF-rpl32 3 TCCAAACCCTATTGCCATCG ACGAAAAAGCTTTAACGGCG 20 20 50.0 45.0 57.9 58.0 0.0 28.2 0.078249 133902 135251 1524-1525 1.000000 79.4 ndhF-rpl32_p4 ndhF-rpl32 4 GGAGTCCAAACCCTATTGCC ACGAAAAAGCTTTAACGGCG 20 20 55.0 45.0 58.2 58.0 3.6 28.2 0.262947 133902 135251 1528-1529 1.000000 77.9 ndhF-rpl32_p5 ndhF-rpl32 5 CCAAACCCTATTGCCATCGT ACGAAAAAGCTTTAACGGCG 20 20 50.0 45.0 58.2 58.0 0.0 28.2 0.264207 133902 135251 1523-1524 1.000000 77.9 ccsA_p1 ccsA 1 AATAGAAAAGGAGCGCAAGA ACTGAGCGATGAAATGGAGT 20 20 40.0 45.0 55.1 56.9 11.5 0.0 4.005755 136206 137174 1169-1169 1.000000 48.0 ccsA_p2 ccsA 2 AATAGAAAAGGAGCGCAAGA CGTGAGAGTGATGTAGAGGG 20 20 40.0 55.0 55.1 56.9 11.5 0.0 4.083762 136206 137174 1111-1111 1.000000 47.4 ccsA_p3 ccsA 3 AAATAGAAAAGGAGCGCAAGA ACTGAGCGATGAAATGGAGT 21 20 38.1 45.0 55.9 56.9 11.5 0.0 4.191497 136206 137174 1170-1170 1.000000 46.5 ccsA_p4 ccsA 4 AGAAAAGGAGCGCAAGATATTC ACTGAGCGATGAAATGGAGT 22 20 40.9 45.0 56.8 56.9 11.5 0.0 4.220273 136206 137174 1166-1166 1.000000 46.3 ccsA_p5 ccsA 5 GAAAAGGAGCGCAAGATATTCT ACTGAGCGATGAAATGGAGT 22 20 40.9 45.0 56.8 56.9 11.5 0.0 4.220273 136206 137174 1165-1165 1.000000 46.3 ycf1-trnN-GUU_p1 ycf1-trnN-GUU 1 CAGAATGAGCTCAGGAACCC CTACGGCCAATCGGTTAACA 20 20 55.0 50.0 58.0 58.0 23.0 8.1 0.048467 152631 153434 904-962 1.000000 83.6 ycf1-trnN-GUU_p2 ycf1-trnN-GUU 2 CAGAATGAGCTCAGGAACCC TACGGCCAATCGGTTAACAG 20 20 55.0 50.0 58.0 58.0 23.0 8.1 0.048467 152631 153434 903-961 1.000000 83.6 ycf1-trnN-GUU_p3 ycf1-trnN-GUU 3 CAGAATGAGCTCAGGAACCC ATTCGAACCTACGGCCAATC 20 20 55.0 50.0 58.0 58.1 23.0 2.2 0.086065 152631 153434 912-970 1.000000 83.3 ycf1-trnN-GUU_p4 ycf1-trnN-GUU 4 CAGAATGAGCTCAGGAACCC GATTCGAACCTACGGCCAAT 20 20 55.0 50.0 58.0 58.1 23.0 2.2 0.086065 152631 153434 913-971 1.000000 83.3 ycf1-trnN-GUU_p5 ycf1-trnN-GUU 5 CAGAATGAGCTCAGGAACCC GTAGGATTCGAACCTACGGC 20 20 55.0 55.0 58.0 57.9 23.0 26.6 0.166811 152631 153434 917-975 1.000000 82.7 ycf2_p1 ycf2 1 TGCATCGAACACTGGTTGAA GATCCACTGCGGGAATGATT 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.066711 173988 174107 796-846 1.000000 83.6 ycf2_p2 ycf2 2 TCATGGATCTCTCGGTTCGA GATCCACTGCGGGAATGATT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.079910 173988 174107 614-664 1.000000 83.5 ycf2_p3 ycf2 3 TCATGGATCTCTCGGTTCGA CAGGCAATCGGAAAAGCAAG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.066084 173988 174107 1076-1126 1.000000 82.7 ycf2_p4 ycf2 4 TGCATCGAACACTGGTTGAA CAGGCAATCGGAAAAGCAAG 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.052885 173988 174107 1258-1308 1.000000 82.4 ycf2_p5 ycf2 5 CGGCCCATTCGTATTCGTAT CAGGCAATCGGAAAAGCAAG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.087849 173988 174107 1124-1174 1.000000 82.4