primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6021 7501 1127-1604 1.000000 90.3 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 AAGTCGCACGTTGCTTTCTA TTCGGAGGTTCGAATCCTTC 20 20 45.0 50.0 58.1 57.3 8.1 16.9 0.806797 6021 7501 1131-1608 1.000000 85.5 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 CGTTGCTTTCTACCACATCG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.2 58.1 0.0 16.9 0.863824 6021 7501 1119-1596 1.000000 85.1 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AGTCGCACGTTGCTTTCTAC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.9 58.1 8.1 16.9 0.938588 6021 7501 1126-1603 1.000000 84.5 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AAGTCGCACGTTGCTTTCTA GGTTTTGGTCCCGTTATTCG 20 20 45.0 50.0 58.1 57.1 8.1 0.0 1.045283 6021 7501 1147-1624 1.000000 83.6 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 CCACTCAGCCATCTCTCC ACGAATCACACTTTTACCACT 18 21 61.1 38.1 56.4 55.5 0.0 0.0 7.134070 8848 10345 1024-2151 0.961538 50.5 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 CCACTCAGCCATCTCTCC AGAACGAATCACACTTTTACCAC 18 23 61.1 39.1 56.4 57.3 0.0 0.0 7.266785 8848 10345 1027-2154 0.961538 50.5 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 CCACTCAGCCATCTCTCC GAACGAATCACACTTTTACCACT 18 23 61.1 39.1 56.4 57.3 0.0 0.0 7.266785 8848 10345 1026-2153 0.961538 50.5 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 CCACTCAGCCATCTCTCC AACGAATCACACTTTTACCACT 18 22 61.1 36.4 56.4 56.2 0.0 0.0 7.374540 8848 10345 1025-2152 0.961538 50.5 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 CCACTCAGCCATCTCTCC TACCACTAAACTATACCCGC 18 20 61.1 45.0 56.4 54.0 0.0 0.0 7.609303 8848 10345 1010-2137 0.961538 50.5 atpH-atpI_p1 atpH-atpI 1 AACGGAAGCAGCAGAAATCA CCATGGAGGGTCATCATTGA 20 20 45.0 50.0 58.1 57.0 0.0 5.6 1.139756 15140 16903 1150-2484 0.923077 79.8 atpH-atpI_p2 atpH-atpI 2 AACGGAAGCAGCAGAAATCA TCCATGGAGGGTCATCATTG 20 20 45.0 50.0 58.1 57.0 0.0 11.4 1.139756 15140 16903 1151-2485 0.923077 79.8 atpH-atpI_p3 atpH-atpI 3 GCCAATCCAGCAGCAATAAC CCATGGAGGGTCATCATTGA 20 20 50.0 50.0 57.8 57.0 0.0 5.6 1.250363 15140 16903 1167-2501 0.923077 78.9 atpH-atpI_p4 atpH-atpI 4 GCCAATCCAGCAGCAATAAC TCCATGGAGGGTCATCATTG 20 20 50.0 50.0 57.8 57.0 0.0 11.4 1.250363 15140 16903 1168-2502 0.923077 78.9 atpH-atpI_p5 atpH-atpI 5 TCCAGCAGCAATAACGGAAG CCATGGAGGGTCATCATTGA 20 20 50.0 50.0 58.3 57.0 0.0 5.6 1.298138 15140 16903 1162-2496 0.923077 78.5 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 ATTTCCATCATTCCGGAGCA GCGACACCCAGATTTGAACT 20 20 45.0 50.0 57.3 58.5 3.3 0.0 1.210998 29211 30385 1265-1360 0.923077 79.2 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 TTTCCATCATTCCGGAGCAT GCGACACCCAGATTTGAACT 20 20 45.0 50.0 57.3 58.5 3.3 0.0 1.210998 29211 30385 1264-1359 0.923077 79.2 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 ATTTCCATCATTCCGGAGCA TAAAGGATTTGCAGTCCCCC 20 20 45.0 50.0 57.3 57.5 3.3 14.6 1.259860 29211 30385 1240-1335 0.923077 78.8 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 TTTCCATCATTCCGGAGCAT TAAAGGATTTGCAGTCCCCC 20 20 45.0 50.0 57.3 57.5 3.3 14.6 1.259860 29211 30385 1239-1334 0.923077 78.8 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 TTTCCATCATTCCGGAGCAT CCTTACCACTTGGCCATGTC 20 20 45.0 55.0 57.3 58.5 3.3 20.8 1.271081 29211 30385 1218-1313 0.923077 78.8 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 AGAGAAAAAGCCGGCTATCG ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.1 58.0 33.1 0.0 0.063299 49264 50412 1107-1531 0.923077 88.4 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 AGAGAAAAAGCCGGCTATCG TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 58.1 58.1 33.1 0.0 0.128108 49264 50412 1115-1539 0.923077 87.9 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 49264 50412 1056-1480 0.923077 87.8 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GAGTCGAACCGATGACCATC ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 58.2 58.0 0.0 0.0 0.163174 49264 50412 1087-1511 0.923077 87.6 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 49264 50412 1064-1488 0.923077 87.3 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 CCTCGTGTCACCAGTTCAAA ATAGGTTGGCCCCTACGTAA 20 20 50.0 50.0 58.1 57.8 0.0 9.7 0.231273 51524 52213 776-811 0.961538 88.6 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 CCTCGTGTCACCAGTTCAAA AAAGTTGGATAGGTTGGCCC 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.283612 51524 52213 784-819 0.961538 88.2 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 CCTCGTGTCACCAGTTCAAA GATAGGTTGGCCCCTACGTA 20 20 50.0 55.0 58.1 58.3 0.0 9.7 0.343555 51524 52213 777-812 0.923077 86.2 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 CGGGAAATAGTCGGGATAGC ATAGGTTGGCCCCTACGTAA 20 20 55.0 50.0 57.6 57.8 0.0 9.7 0.544785 51524 52213 824-859 0.961538 86.1 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 CCTCGTGTCACCAGTTCAAA TAGGTTGGCCCCTACGTAAG 20 20 50.0 55.0 58.1 58.5 0.0 0.0 0.563506 51524 52213 775-810 0.923077 84.4 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TCATATTCGTGAAGCAGAAACA AGAAGGTCTACGGTTCGAGT 22 20 36.4 50.0 56.1 57.8 0.0 0.0 4.083948 53909 55955 789-2350 0.961538 57.8 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TCATATTCGTGAAGCAGAAACA GAAGGTCTACGGTTCGAGTC 22 20 36.4 55.0 56.1 57.5 0.0 0.0 4.427720 53909 55955 788-2349 0.961538 55.0 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 TCATATTCGTGAAGCAGAAACA GTTCGAGTCCGTATAGCCCT 22 20 36.4 55.0 56.1 58.7 0.0 0.0 4.570014 53909 55955 777-2338 0.961538 53.9 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 CATATTCGTGAAGCAGAAACA AGAAGGTCTACGGTTCGAGT 21 20 38.1 50.0 54.6 57.8 0.0 0.0 4.585537 53909 55955 788-2349 0.961538 53.8 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TCATATTCGTGAAGCAGAAACAT AGAAGGTCTACGGTTCGAGT 23 20 34.8 50.0 56.6 57.8 0.0 0.0 4.587896 53909 55955 789-2350 0.961538 53.8 accD-psaI_p1 accD-psaI 1 GTATGTGCTTCTGGAGGAGC CCATTGCAATTGCCGGAAAT 20 20 55.0 45.0 58.1 58.0 0.0 26.9 0.080258 63453 64896 1726-2178 0.961538 89.8 accD-psaI_p2 accD-psaI 2 GTATGTGCTTCTGGAGGAGC CACACGGAGCCTAGACAATC 20 20 55.0 55.0 58.1 58.1 0.0 0.0 0.125360 63453 64896 1777-2229 0.961538 89.5 accD-psaI_p3 accD-psaI 3 GTATGTGCTTCTGGAGGAGC AGACCTGCGATCCCATAGAA 20 20 55.0 50.0 58.1 57.9 0.0 0.0 0.141359 63453 64896 2380-2838 0.961538 89.3 accD-psaI_p4 accD-psaI 4 TCAGCTCCACGGTTTCTTTC CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 58.1 58.0 0.0 26.9 0.148050 63453 64896 1376-1828 0.961538 89.3 accD-psaI_p5 accD-psaI 5 GTATGTGCTTCTGGAGGAGC TTGTTTTTCGAGACCCCGTT 20 20 55.0 45.0 58.1 58.0 0.0 0.0 0.094506 63453 64896 2241-2675 0.923077 88.2 psaI-ycf4_p1 psaI-ycf4 1 ATTTCCGGCAATTGCAATGG AAAAAGGATACAGGCCCAGC 20 20 45.0 50.0 58.0 58.1 30.3 0.0 0.174371 65008 65399 535-546 0.961538 87.4 psaI-ycf4_p2 psaI-ycf4 2 GGCAATTGCAATGGCTTCTT AAAAAGGATACAGGCCCAGC 20 20 45.0 50.0 57.9 58.1 32.4 0.0 0.250905 65008 65399 529-540 0.961538 86.8 psaI-ycf4_p3 psaI-ycf4 3 ATTTCCGGCAATTGCAATGG TTGTTTTTCGAGACCCCGTT 20 20 45.0 45.0 58.0 58.0 30.3 0.0 0.068254 65008 65399 506-517 0.923077 86.2 psaI-ycf4_p4 psaI-ycf4 4 GGCAATTGCAATGGCTTCTT TTGTTTTTCGAGACCCCGTT 20 20 45.0 45.0 57.9 58.0 32.4 0.0 0.144788 65008 65399 500-511 0.923077 85.7 psaI-ycf4_p5 psaI-ycf4 5 GGCCTAGTATTTCCGGCAAT TTGTTTTTCGAGACCCCGTT 20 20 50.0 45.0 57.7 58.0 4.4 0.0 0.313195 65008 65399 514-525 0.923077 84.3 petA-psbJ_p1 petA-psbJ 1 TTTGGCGCAAGTCTTTTTGG CATATTCCGGCTTGGGTTCA 20 20 45.0 50.0 58.1 57.9 10.8 0.0 0.118088 67843 69037 1209-1451 0.846154 84.9 petA-psbJ_p2 petA-psbJ 2 TTTGGCGCAAGTCTTTTTGG GTTCATATTCCGGCTTGGGT 20 20 45.0 50.0 58.1 57.9 10.8 0.0 0.119536 67843 69037 1212-1454 0.846154 84.9 petA-psbJ_p3 petA-psbJ 3 CCCATTACGTGTCCAAGGTC CATATTCCGGCTTGGGTTCA 20 20 55.0 50.0 58.3 57.9 0.0 0.0 0.317172 67843 69037 1195-1496 0.884615 84.8 petA-psbJ_p4 petA-psbJ 4 GACCCATTACGTGTCCAAGG CATATTCCGGCTTGGGTTCA 20 20 55.0 50.0 58.3 57.9 0.0 0.0 0.317172 67843 69037 1197-1498 0.884615 84.8 petA-psbJ_p5 petA-psbJ 5 CCCATTACGTGTCCAAGGTC GTTCATATTCCGGCTTGGGT 20 20 55.0 50.0 58.3 57.9 0.0 0.0 0.318620 67843 69037 1198-1499 0.884615 84.8 psaJ-rpl33_p1 psaJ-rpl33 1 TGGTTTGGGTCTTTAGCAGG AATGCCCGGCGATTCTTTAT 20 20 50.0 45.0 57.7 58.0 0.0 9.3 0.305108 72360 72980 722-888 1.000000 89.6 psaJ-rpl33_p2 psaJ-rpl33 2 TGGTTTGGGTCTTTAGCAGG ATGCCCGGCGATTCTTTATT 20 20 50.0 45.0 57.7 58.0 0.0 9.3 0.305108 72360 72980 721-887 1.000000 89.6 psaJ-rpl33_p3 psaJ-rpl33 3 GGTTTGGGTCTTTAGCAGGT AATGCCCGGCGATTCTTTAT 20 20 50.0 45.0 57.7 58.0 0.0 9.3 0.306721 72360 72980 721-887 1.000000 89.5 psaJ-rpl33_p4 psaJ-rpl33 4 GGTTTGGGTCTTTAGCAGGT ATGCCCGGCGATTCTTTATT 20 20 50.0 45.0 57.7 58.0 0.0 9.3 0.306721 72360 72980 720-886 1.000000 89.5 psaJ-rpl33_p5 psaJ-rpl33 5 TGGTTTGGGTCTTTAGCAGG AAATGCCCGGCGATTCTTTA 20 20 50.0 45.0 57.7 58.2 0.0 9.3 0.528682 72360 72980 723-889 1.000000 87.8 petD-rpoA_p1 petD-rpoA 1 TAATGGTTTCAGTACCGGCG AGAGATGCATCCATTTGCGT 20 20 50.0 45.0 58.0 58.0 0.0 23.1 0.061381 83094 83267 1065-1100 1.000000 89.4 petD-rpoA_p2 petD-rpoA 2 TAATGGTTTCAGTACCGGCG CATTTGCGTCAAGGGTCCTA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.120887 83094 83267 1054-1089 1.000000 89.0 petD-rpoA_p3 petD-rpoA 3 CTCGAGCCGGATGATGAAAA AGAGATGCATCCATTTGCGT 20 20 50.0 45.0 58.1 58.0 5.0 23.1 0.108470 83094 83267 1435-1470 1.000000 87.6 petD-rpoA_p4 petD-rpoA 4 TAATGGTTTCAGTACCGGCG GGATACCGTACGAAACCCAC 20 20 50.0 55.0 58.0 58.1 0.0 18.8 0.086376 83094 83267 909-944 0.923077 85.2 petD-rpoA_p5 petD-rpoA 5 CTCGAGCCGGATGATGAAAA GGATACCGTACGAAACCCAC 20 20 50.0 55.0 58.1 58.1 5.0 18.8 0.133464 83094 83267 1279-1314 0.923077 83.5 ndhF-rpl32_p1 ndhF-rpl32 1 TTTTGACAAGCACTTGCAGC AAAGGGCTTTTACTGCAGCT 20 20 45.0 45.0 58.1 58.0 10.3 15.3 0.075847 118312 119199 1515-1629 0.961538 89.9 ndhF-rpl32_p2 ndhF-rpl32 2 CTCCCACGAGTTCCCAAAAA AAAGGGCTTTTACTGCAGCT 20 20 50.0 45.0 58.0 58.0 0.0 15.3 0.025416 118312 119199 1451-1565 0.923077 88.7 ndhF-rpl32_p3 ndhF-rpl32 3 ATGCTTTTTGTTGCTGTCGG AAAGGGCTTTTACTGCAGCT 20 20 45.0 45.0 57.9 58.0 0.0 15.3 0.139672 118312 119199 1092-1206 0.884615 86.3 ndhF-rpl32_p4 ndhF-rpl32 4 ACAAGCACTTGCAGCAATTG AAAGGGCTTTTACTGCAGCT 20 20 45.0 45.0 58.1 58.0 18.8 15.3 0.140400 118312 119199 1510-1563 0.269231 54.3 ndhF-rpl32_p5 ndhF-rpl32 5 GACAAGCACTTGCAGCAATT AAAGGGCTTTTACTGCAGCT 20 20 45.0 45.0 57.9 58.0 8.7 15.3 0.145558 118312 119199 1511-1564 0.269231 54.3 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 TTTTTGTGCGACAAACAAAT TCCTAAGAGCAGCGTGTCTA 20 20 30.0 50.0 53.4 57.9 12.1 0.0 4.747833 119374 119965 533-719 0.961538 52.5 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 TTTTTGTGCGACAAACAAAT AGCAGCGTGTCTACCAATTT 20 20 30.0 45.0 53.4 57.8 12.1 0.0 4.808560 119374 119965 526-712 0.961538 52.0 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 TTTTTGTGCGACAAACAAAT CCTAAGAGCAGCGTGTCTAC 20 20 30.0 55.0 53.4 57.8 12.1 0.0 4.819851 119374 119965 532-718 0.961538 51.9 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 TTTTTGTGCGACAAACAAAT CTAAGAGCAGCGTGTCTACC 20 20 30.0 55.0 53.4 57.8 12.1 0.0 4.819851 119374 119965 531-717 0.961538 51.9 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 TTTTTGTGCGACAAACAAAT GAGCAGCGTGTCTACCAATT 20 20 30.0 50.0 53.4 58.3 12.1 0.0 4.896703 119374 119965 527-713 0.961538 51.3 psaC-ndhE_p1 psaC-ndhE 1 CATAAATTTTTACTGAATGTGACA CGATCCACCGGAACAGAAAA 24 20 25.0 50.0 52.3 58.2 0.0 9.5 9.855741 123231 123887 678-822 1.000000 52.0 psaC-ndhE_p2 psaC-ndhE 2 TCATAAATTTTTACTGAATGTGAC CGATCCACCGGAACAGAAAA 24 20 25.0 50.0 52.1 58.2 0.0 9.5 10.103061 123231 123887 679-823 1.000000 52.0 psaC-ndhE_p3 psaC-ndhE 3 CATAAATTTTTACTGAATGTGACA CTGAAGCAGCTATTGGGCTA 24 20 25.0 50.0 52.3 57.4 0.0 0.0 10.286590 123231 123887 711-855 1.000000 52.0 psaC-ndhE_p4 psaC-ndhE 4 CATAAATTTTTACTGAATGTGACA TGAAGCAGCTATTGGGCTAG 24 20 25.0 50.0 52.3 57.4 0.0 0.0 10.286590 123231 123887 710-854 1.000000 52.0 psaC-ndhE_p5 psaC-ndhE 5 CATAAATTTTTACTGAATGTGACA ATTGTTTCGTCGATCCACCG 24 20 25.0 50.0 52.3 58.6 0.0 0.0 10.303104 123231 123887 688-832 1.000000 52.0 rps15-ycf1_p1 rps15-ycf1 1 AACACCATGCATTGATGGGT AAGAAAAAGCGCCAAACACC 20 20 45.0 45.0 58.1 58.1 8.9 2.3 0.124034 129862 130407 1317-1464 0.769231 81.8 rps15-ycf1_p2 rps15-ycf1 2 ACCATGCATTGATGGGTGTT AAGAAAAAGCGCCAAACACC 20 20 45.0 45.0 58.1 58.1 8.9 2.3 0.124034 129862 130407 1314-1461 0.769231 81.8 rps15-ycf1_p3 rps15-ycf1 3 CACCGTCGAGAGTAACGATC AAGAAAAAGCGCCAAACACC 20 20 55.0 45.0 57.9 58.1 0.0 2.3 0.153750 129862 130407 1345-1492 0.769231 81.5 rps15-ycf1_p4 rps15-ycf1 4 GGCTCAGCTCCAGCATAATT AGGGGAGAAATGCGTCTAGA 20 20 50.0 50.0 58.0 57.8 14.7 0.0 0.182266 129862 130407 1729-1882 0.653846 76.7 rps15-ycf1_p5 rps15-ycf1 5 GGCTCAGCTCCAGCATAATT AAGAAAAAGCGCCAAACACC 20 20 50.0 45.0 58.0 58.1 14.7 2.3 0.086957 129862 130407 1570-1717 0.615385 75.9