primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6038 6756 792-1094 1.000000 87.6 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 TCATGTCCTTCAAGTCGCAC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 0.0 16.9 0.280333 6038 6756 803-1105 1.000000 87.1 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AAGTCGCACGTTGCTTTCTA CTCGGAGGTTCGAATCCTTC 20 20 45.0 55.0 58.1 57.8 8.1 16.9 0.350677 6038 6756 796-1098 1.000000 86.5 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 TCATGTCCTTCAAGTCGCAC CTCGGAGGTTCGAATCCTTC 20 20 50.0 55.0 58.2 57.8 0.0 16.9 0.415585 6038 6756 807-1109 1.000000 86.0 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AAGTCGCACGTTGCTTTCTA TACTCGGAGGTTCGAATCCT 20 20 45.0 50.0 58.1 57.6 8.1 16.1 0.571278 6038 6756 798-1100 1.000000 84.8 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 CAATCCGACGCTTTAGTCCA ACGAATCACACTTTTACCACT 20 21 50.0 38.1 58.0 55.5 0.0 0.0 3.540425 8199 9519 686-1390 1.000000 63.7 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 AATCCGACGCTTTAGTCCAC ACGAATCACACTTTTACCACT 20 21 50.0 38.1 58.0 55.5 0.0 0.0 3.541813 8199 9519 685-1389 1.000000 63.7 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 CAATCCGACGCTTTAGTCCA AGAACGAATCACACTTTTACCAC 20 23 50.0 39.1 58.0 57.3 0.0 0.0 3.673141 8199 9519 689-1393 1.000000 62.6 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 CAATCCGACGCTTTAGTCCA GAACGAATCACACTTTTACCACT 20 23 50.0 39.1 58.0 57.3 0.0 0.0 3.673141 8199 9519 688-1392 1.000000 62.6 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 AATCCGACGCTTTAGTCCAC GAACGAATCACACTTTTACCACT 20 23 50.0 39.1 58.0 57.3 0.0 0.0 3.674529 8199 9519 687-1391 1.000000 62.6 trnG-UCC-trnR-UCU_p1 trnG-UCC-trnR-UCU 1 AGCCTTCCAAGCTAACGATG AGAAGACCTCTGTCCTATCCA 20 21 50.0 47.6 58.0 56.9 0.0 0.0 2.081443 10295 10450 210-243 1.000000 73.3 trnG-UCC-trnR-UCU_p2 trnG-UCC-trnR-UCU 2 CCTAGCCTTCCAAGCTAACG AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 58.1 56.9 0.0 0.0 2.110280 10295 10450 213-246 1.000000 73.0 trnG-UCC-trnR-UCU_p3 trnG-UCC-trnR-UCU 3 AGCCTTCCAAGCTAACGATG AGGTTTAGAAGACCTCTGTCCT 20 22 50.0 45.5 58.0 57.9 0.0 0.0 2.164771 10295 10450 216-249 1.000000 72.4 trnG-UCC-trnR-UCU_p4 trnG-UCC-trnR-UCU 4 CCTAGCCTTCCAAGCTAACG AGGTTTAGAAGACCTCTGTCCT 20 22 55.0 45.5 58.1 57.9 0.0 0.0 2.193608 10295 10450 219-252 1.000000 72.1 trnG-UCC-trnR-UCU_p5 trnG-UCC-trnR-UCU 5 CCAACGTCGACTATAACCCC AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 57.8 56.9 14.7 0.0 2.265991 10295 10450 231-264 1.000000 71.3 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 46509 47192 700-769 1.000000 88.1 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 46509 47192 708-777 1.000000 87.5 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 CTAACCTCTGAGCTAAGCGG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.5 58.0 5.5 0.0 0.505133 46509 47192 660-729 1.000000 86.3 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT ATCCAATCAAGTCCGTAGCG 20 20 50.0 50.0 57.8 57.8 15.5 0.0 0.465562 46509 47192 723-792 1.000000 86.1 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GGAATCGAACCGATGACCAT AGTCCGTAGCGTCTACCAAT 20 20 50.0 50.0 57.8 58.2 15.5 10.2 0.480302 46509 47192 714-783 1.000000 86.1 trnF-GAA-trnV-UAC_p1 trnF-GAA-trnV-UAC 1 CCTCGTGTCACCAGTTCAAA AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.249179 48285 49399 428-1182 1.000000 90.0 trnF-GAA-trnV-UAC_p2 trnF-GAA-trnV-UAC 2 GGAAATGGTCGGGATAGCTC AGAAGGTCTACGGTTCGAGT 20 20 55.0 50.0 57.8 57.8 0.0 0.0 0.368624 48285 49399 474-1228 1.000000 89.1 trnF-GAA-trnV-UAC_p3 trnF-GAA-trnV-UAC 3 AATGGTCGGGATAGCTCAGT AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 58.2 57.8 0.0 0.0 0.402569 48285 49399 471-1225 1.000000 88.8 trnF-GAA-trnV-UAC_p4 trnF-GAA-trnV-UAC 4 ATGGTCGGGATAGCTCAGTT AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 58.2 57.8 0.0 0.0 0.402569 48285 49399 470-1224 1.000000 88.8 trnF-GAA-trnV-UAC_p5 trnF-GAA-trnV-UAC 5 CCTCGTGTCACCAGTTCAAA GAAGGTCTACGGTTCGAGTC 20 20 50.0 55.0 58.1 57.5 0.0 0.0 0.592951 48285 49399 427-1181 1.000000 87.3 trnM-CAU-atpE_p1 trnM-CAU-atpE 1 TATTGCTTTCATACGGCGGG CTCTCAGACGAGCTAGGACA 20 20 50.0 55.0 58.4 58.0 13.2 0.0 0.442584 50306 50574 304-466 1.000000 87.3 trnM-CAU-atpE_p2 trnM-CAU-atpE 2 TATTGCTTTCATACGGCGGG CGAGCTAGGACACGAGTAGA 20 20 50.0 55.0 58.4 58.1 13.2 0.0 0.474048 50306 50574 296-458 1.000000 87.2 trnM-CAU-atpE_p3 trnM-CAU-atpE 3 TATTGCTTTCATACGGCGGG AGGACACGAGTAGAAGCTGT 20 20 50.0 50.0 58.4 58.1 13.2 0.0 0.498909 50306 50574 290-452 1.000000 87.1 trnM-CAU-atpE_p4 trnM-CAU-atpE 4 TATTGCTTTCATACGGCGGG GGACACGAGTAGAAGCTGTC 20 20 50.0 55.0 58.4 57.7 13.2 0.0 0.676973 50306 50574 289-451 1.000000 85.7 trnM-CAU-atpE_p5 trnM-CAU-atpE 5 TATTGCTTTCATACGGCGGG TCTCAGACGAGCTAGGACAC 20 20 50.0 55.0 58.4 58.3 13.2 0.0 0.671029 50306 50574 303-465 1.000000 85.5 clpP-psbB_p1 clpP-psbB 1 CGCACTATACGTCAACCCAA CCAGCCCAACCAGAAACTAG 20 20 50.0 55.0 58.0 58.2 0.0 0.0 0.174567 70442 71433 1056-1172 1.000000 88.5 clpP-psbB_p2 clpP-psbB 2 CGCACTATACGTCAACCCAA CGATACCAAGGCAAACCCAT 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.238244 70442 71433 972-1088 1.000000 88.5 clpP-psbB_p3 clpP-psbB 3 TATACGTCAACCCAAGCTGC CCAGCCCAACCAGAAACTAG 20 20 50.0 55.0 58.0 58.2 0.0 0.0 0.192157 70442 71433 1051-1167 1.000000 88.4 clpP-psbB_p4 clpP-psbB 4 TATACGTCAACCCAAGCTGC CGATACCAAGGCAAACCCAT 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.255834 70442 71433 967-1083 1.000000 88.3 clpP-psbB_p5 clpP-psbB 5 CTTTTGGAACACCAATGGGC CCAGCCCAACCAGAAACTAG 20 20 50.0 55.0 57.8 58.2 3.6 0.0 0.341941 70442 71433 1002-1118 1.000000 87.5 psbB-psbT_p1 psbB-psbT 1 GGAGATCCAACTACAAGGAGAC GGAATGTATAAACCAATGCTTCCA 22 24 50.0 37.5 57.6 57.5 0.0 0.0 6.858434 72961 73367 428-555 1.000000 51.4 psbB-psbT_p2 psbB-psbT 2 AGGAGATCCAACTACAAGGAGA GGAATGTATAAACCAATGCTTCCA 22 24 45.5 37.5 57.7 57.5 0.9 0.0 6.802790 72961 73367 429-556 1.000000 51.3 psbB-psbT_p3 psbB-psbT 3 AGGAGATCCAACTACAAGGAGA AGGAATGTATAAACCAATGCTTCC 22 24 45.5 37.5 57.7 57.3 0.9 0.0 7.054142 72961 73367 430-557 1.000000 51.3 psbB-psbT_p4 psbB-psbT 4 TGCTCAAGTAGAATTTGGAGCA GGAATGTATAAACCAATGCTTCCA 22 24 40.9 37.5 58.0 57.5 9.8 0.0 6.483786 72961 73367 462-589 1.000000 50.9 psbB-psbT_p5 psbB-psbT 5 TGCTCAAGTAGAATTTGGAGCA AGGAATGTATAAACCAATGCTTCC 22 24 40.9 37.5 58.0 57.3 9.8 0.0 6.735139 72961 73367 463-590 1.000000 50.9 rpoA-rps11_p1 rpoA-rps11 1 AAGTGGGGACAGAACGAAAC GGAACACCTTATGCTGCTCA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.150688 78254 78345 415-424 1.000000 83.0 rpoA-rps11_p2 rpoA-rps11 2 TCGCATTTCGAACAGGCATA GGAACACCTTATGCTGCTCA 20 20 45.0 50.0 58.0 57.9 13.3 0.0 0.130998 78254 78345 851-860 1.000000 81.6 rpoA-rps11_p3 rpoA-rps11 3 TCGCATTTCGAACAGGCATA AAGAGATGCGGCATTACGAG 20 20 45.0 50.0 58.0 58.1 13.3 17.8 0.159047 78254 78345 747-756 1.000000 81.5 rpoA-rps11_p4 rpoA-rps11 4 GTGTCCTCTTCCTCTGCATG GGAACACCTTATGCTGCTCA 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.135216 78254 78345 1014-1023 1.000000 81.3 rpoA-rps11_p5 rpoA-rps11 5 GTGTCCTCTTCCTCTGCATG AAGAGATGCGGCATTACGAG 20 20 55.0 50.0 58.0 58.1 0.0 17.8 0.163264 78254 78345 910-919 1.000000 81.2 rps12-trnV-GAC_p1 rps12-trnV-GAC 1 TGGCAACTTTACGTAAGGCA GATGACTTCCACCACGTCAA 20 20 45.0 50.0 57.7 57.8 16.5 0.0 0.421509 97645 99693 1890-2145 1.000000 84.3 rps12-trnV-GAC_p2 rps12-trnV-GAC 2 TGGCAACTTTACGTAAGGCA ATGACTTCCACCACGTCAAG 20 20 45.0 50.0 57.7 57.8 16.5 0.0 0.427523 97645 99693 1889-2144 1.000000 84.3 rps12-trnV-GAC_p3 rps12-trnV-GAC 3 TGGCAACTTTACGTAAGGCA AACTGATGACTTCCACCACG 20 20 45.0 50.0 57.7 57.8 16.5 0.0 0.427523 97645 99693 1894-2149 1.000000 84.2 rps12-trnV-GAC_p4 rps12-trnV-GAC 4 TGGCAACTTTACGTAAGGCA CTGATGACTTCCACCACGTC 20 20 45.0 55.0 57.7 58.3 16.5 0.0 0.542896 97645 99693 1892-2147 1.000000 83.3 rps12-trnV-GAC_p5 rps12-trnV-GAC 5 TGGCAACTTTACGTAAGGCA GTCAAGGTGACACTCTACCG 20 20 45.0 55.0 57.7 57.7 16.5 5.4 0.606988 97645 99693 1875-2130 1.000000 82.8 trnN-GUU-ndhF_p1 trnN-GUU-ndhF 1 CAAAGTGAGCCCTTTCCCTT TGCTCCCGGTTACTATGTCA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.145781 108172 108974 1197-1197 0.200000 46.8 trnN-GUU-ndhF_p2 trnN-GUU-ndhF 2 GCAAAAATGCGTTCCTCCTC TGCTCCCGGTTACTATGTCA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.162093 108172 108974 1437-1437 0.200000 46.7 trnN-GUU-ndhF_p3 trnN-GUU-ndhF 3 GGCAGAATAGCAGAGCAAGT TGCTCCCGGTTACTATGTCA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.180235 108172 108974 1475-1475 0.200000 46.6 trnN-GUU-ndhF_p4 trnN-GUU-ndhF 4 TATGCCGAGGTATTGAGGGT TGCTCCCGGTTACTATGTCA 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.241815 108172 108974 1308-1308 0.200000 46.1 trnN-GUU-ndhF_p5 trnN-GUU-ndhF 5 CGGCCGCAAAGATATTGAAC TGCTCCCGGTTACTATGTCA 20 20 50.0 50.0 57.9 58.1 14.7 0.0 0.250028 108172 108974 1638-1638 0.200000 46.0 ndhF-rpl32_p1 ndhF-rpl32 1 AGGGCCCTCTTATCTCTTCC CTTTTTGACTGTCCCGTGGA 20 20 55.0 50.0 57.9 58.0 22.3 5.2 0.148960 109068 109873 1003-1467 0.600000 74.8 ndhF-rpl32_p2 ndhF-rpl32 2 GGGCCCTCTTATCTCTTCCT CTTTTTGACTGTCCCGTGGA 20 20 55.0 50.0 57.9 58.0 17.0 5.2 0.148960 109068 109873 1002-1466 0.600000 74.8 ndhF-rpl32_p3 ndhF-rpl32 3 TACGAGCTCGGGTTATGGAA CTTTTTGACTGTCCCGTGGA 20 20 50.0 50.0 58.2 58.0 36.9 5.2 0.271713 109068 109873 980-1444 0.600000 73.8 ndhF-rpl32_p4 ndhF-rpl32 4 GGAAGTATCAACTGCACCGA CTTTTTGACTGTCCCGTGGA 20 20 50.0 50.0 57.6 58.0 0.0 5.2 0.418290 109068 109873 1404-1404 0.200000 44.7 ndhF-rpl32_p5 ndhF-rpl32 5 AGGAAGTATCAACTGCACCG CTTTTTGACTGTCCCGTGGA 20 20 50.0 50.0 57.6 58.0 0.0 5.2 0.424867 109068 109873 1405-1405 0.200000 44.6 trnL-UAG-ccsA_p1 trnL-UAG-ccsA 1 TAGACACGCTGCTCTTAGGA GTCCCGAAGAAATCCAACGA 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.213227 110787 110927 389-404 1.000000 86.4 trnL-UAG-ccsA_p2 trnL-UAG-ccsA 2 TAAGCCGCCATGGTGAAATT GTCCCGAAGAAATCCAACGA 20 20 45.0 50.0 58.2 57.9 27.1 0.0 0.242943 110787 110927 411-426 1.000000 85.7 trnL-UAG-ccsA_p3 trnL-UAG-ccsA 3 TAGACACGCTGCTCTTAGGA CTGCTCCAGAAAGAATGCCT 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.250050 110787 110927 920-935 1.000000 82.7 trnL-UAG-ccsA_p4 trnL-UAG-ccsA 4 TAGACACGCTGCTCTTAGGA TGGCGAAACCTTGGGTAAAA 20 20 50.0 45.0 57.9 57.9 0.0 0.0 0.193111 110787 110927 536-546 0.800000 75.9 trnL-UAG-ccsA_p5 trnL-UAG-ccsA 5 TAAGCCGCCATGGTGAAATT TGGCGAAACCTTGGGTAAAA 20 20 45.0 45.0 58.2 57.9 27.1 0.0 0.222828 110787 110927 558-568 0.800000 75.5 ndhI-rps15_p1 ndhI-rps15 1 CCGTTCATAAACATCGCAGC GGCAATTTTTGAATGAGGGCA 20 21 50.0 42.9 57.9 57.9 0.0 0.0 1.147740 115504 116748 2233-2233 0.200000 38.8 ndhI-rps15_p2 ndhI-rps15 2 ACCCGTTCATAAACATCGCA GGCAATTTTTGAATGAGGGCA 20 21 45.0 42.9 57.9 57.9 0.0 0.0 1.158658 115504 116748 2235-2235 0.200000 38.7 ndhI-rps15_p3 ndhI-rps15 3 CTTGCGGCTCGTATTGTTTG GGCAATTTTTGAATGAGGGCA 20 21 50.0 42.9 58.1 57.9 0.0 0.0 1.174390 115504 116748 1940-1940 0.200000 38.6 ndhI-rps15_p4 ndhI-rps15 4 AAAATTCCGGACCATGACGT GGCAATTTTTGAATGAGGGCA 20 21 45.0 42.9 57.8 57.9 1.8 0.0 1.250789 115504 116748 2355-2355 0.200000 38.0 ndhI-rps15_p5 ndhI-rps15 5 TTCCGGACCATGACGTATCT GGCAATTTTTGAATGAGGGCA 20 21 50.0 42.9 58.2 57.9 1.8 0.0 1.285023 115504 116748 2351-2351 0.200000 37.7 trnV-GAC-rps12_p1 trnV-GAC-rps12 1 GATGACTTCCACCACGTCAA TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.8 57.7 0.0 16.5 0.421509 131438 133486 1890-2145 1.000000 83.8 trnV-GAC-rps12_p2 trnV-GAC-rps12 2 AACTGATGACTTCCACCACG TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.8 57.7 0.0 16.5 0.427523 131438 133486 1894-2149 1.000000 83.8 trnV-GAC-rps12_p3 trnV-GAC-rps12 3 ATGACTTCCACCACGTCAAG TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.8 57.7 0.0 16.5 0.427523 131438 133486 1889-2144 1.000000 83.8 trnV-GAC-rps12_p4 trnV-GAC-rps12 4 CTGATGACTTCCACCACGTC TGGCAACTTTACGTAAGGCA 20 20 55.0 45.0 58.3 57.7 0.0 16.5 0.542896 131438 133486 1892-2147 1.000000 82.9 trnV-GAC-rps12_p5 trnV-GAC-rps12 5 GTCAAGGTGACACTCTACCG TGGCAACTTTACGTAAGGCA 20 20 55.0 45.0 57.7 57.7 5.4 16.5 0.606988 131438 133486 1875-2130 1.000000 82.4