primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score ycf80-trnR-CCG_p1 ycf80-trnR-CCG 1 TCAAGCCTTTTCGCCATACA CTGGTGGTCGAAGGTTCAAA 20 20 45.0 50.0 57.8 58.0 0.0 0.0 0.230870 6939 7708 1261-1261 0.333333 51.5 ycf80-trnR-CCG_p2 ycf80-trnR-CCG 2 TCAAGCCTTTTCGCCATACA ATCGGGCATGTAACTCAGTG 20 20 45.0 50.0 57.8 57.7 0.0 0.0 0.508589 6939 7708 1303-1303 0.333333 49.3 ycf80-trnR-CCG_p3 ycf80-trnR-CCG 3 TCAAGCCTTTTCGCCATACA GATTCCGATTCTGGTGGTCG 20 20 45.0 55.0 57.8 58.4 0.0 0.0 0.620745 6939 7708 1271-1271 0.333333 48.4 ycf80-trnR-CCG_p4 ycf80-trnR-CCG 4 TCAAGCCTTTTCGCCATACA ATTCTGGTGGTCGAAGGTTC 20 20 45.0 50.0 57.8 57.5 0.0 0.0 0.667073 6939 7708 1264-1264 0.333333 48.0 ycf80-trnR-CCG_p5 ycf80-trnR-CCG 5 TCAAGCCTTTTCGCCATACA GATTCTGGTGGTCGAAGGTT 20 20 45.0 50.0 57.8 57.5 0.0 0.0 0.667073 6939 7708 1265-1265 0.333333 48.0 ycf20-cpcG_p1 ycf20-cpcG 1 ACAACAAGAAGGTATGCAGCA TATTGTGGCCAGGTCCTGTA 21 20 42.9 50.0 58.1 58.0 0.0 17.9 1.177750 9223 9881 1474-1480 0.666667 69.2 ycf20-cpcG_p2 ycf20-cpcG 2 ACAAGAAGGTATGCAGCATGT TATTGTGGCCAGGTCCTGTA 21 20 42.9 50.0 57.9 58.0 18.8 17.9 1.117774 9223 9881 1471-1471 0.333333 44.4 ycf20-cpcG_p3 ycf20-cpcG 3 ACAAGAAGGTATGCAGCATGT GGCCAGGTCCTGTAAATCAG 21 20 42.9 55.0 57.9 58.0 18.8 17.9 1.121607 9223 9881 1465-1465 0.333333 44.4 ycf20-cpcG_p4 ycf20-cpcG 4 ACAAGAAGGTATGCAGCATGT ACAAAGGGTTTTAGGGCGAG 21 20 42.9 50.0 57.9 58.1 18.8 0.0 1.171847 9223 9881 1728-1728 0.333333 44.0 ycf20-cpcG_p5 ycf20-cpcG 5 ACAACAAGAAGGTATGCAGCA GGCCAGGTCCTGTAAATCAG 21 20 42.9 55.0 58.1 58.0 0.0 17.9 1.181582 9223 9881 1468-1468 0.333333 43.9 ycf22-psaC_p1 ycf22-psaC 1 CGCTGCCCTGACTAAATCAT TGGGTGTAAGCGTTGTGAAA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.080776 15938 17085 1551-1562 0.666667 70.4 ycf22-psaC_p2 ycf22-psaC 2 CGCTGCCCTGACTAAATCAT TTGGGTGTAAGCGTTGTGAA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.080776 15938 17085 1552-1563 0.666667 70.4 ycf22-psaC_p3 ycf22-psaC 3 CGCTGCCCTGACTAAATCAT TGCAGGTATGACAGGTGGTA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.095379 15938 17085 2179-2190 0.666667 69.6 ycf22-psaC_p4 ycf22-psaC 4 CGCTGCCCTGACTAAATCAT GGACGTAACATAGGTGCAGG 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.105026 15938 17085 2193-2204 0.666667 69.5 ycf22-psaC_p5 ycf22-psaC 5 CGCTGCCCTGACTAAATCAT GCCAAGCAGGACGTAACATA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.059500 15938 17085 2201-2201 0.333333 52.9 gltB-rpoZ_p1 gltB-rpoZ 1 AACCAACACCACATGCATCT TGGTTGAACAAGCTGTGGTT 20 20 45.0 45.0 58.0 58.2 0.0 15.8 0.154345 22115 22486 1079-1102 1.000000 88.4 gltB-rpoZ_p2 gltB-rpoZ 2 AACCAACACCACATGCATCT AGGACACTAGAGTCTCCAGC 20 20 45.0 55.0 58.0 57.9 0.0 18.1 0.138162 22115 22486 1209-1209 0.666667 67.1 gltB-rpoZ_p3 gltB-rpoZ 3 AACCAACACCACATGCATCT GGACACTAGAGTCTCCAGCA 20 20 45.0 55.0 58.0 58.2 0.0 18.1 0.159615 22115 22486 1208-1208 0.666667 66.9 gltB-rpoZ_p4 gltB-rpoZ 4 AACCAACACCACATGCATCT TTGTGTAAGCATTGCCACCT 20 20 45.0 45.0 58.0 58.0 0.0 4.7 0.006396 22115 22486 1121-1121 0.333333 53.3 gltB-rpoZ_p5 gltB-rpoZ 5 TTATACCTGCCCCATCACCA TTGTGTAAGCATTGCCACCT 20 20 50.0 45.0 58.1 58.0 0.0 4.7 0.105790 22115 22486 1247-1247 0.333333 52.5 rpl21-rpl32_p1 rpl21-rpl32 1 AACCCACATTTGCCTTCCAT GCTGGCTCTTGGGCTTTATA 20 20 45.0 50.0 58.0 57.7 0.0 0.0 0.376972 47853 48730 1351-1353 1.000000 86.3 rpl21-rpl32_p2 rpl21-rpl32 2 ACCCACATTTGCCTTCCATT GCTGGCTCTTGGGCTTTATA 20 20 45.0 50.0 58.0 57.7 0.0 0.0 0.376972 47853 48730 1350-1352 1.000000 86.3 rpl21-rpl32_p3 rpl21-rpl32 3 AACCCACATTTGCCTTCCAT ACACCTGTTTTAGCAGCTGG 20 20 45.0 50.0 58.0 58.4 0.0 17.1 0.419354 47853 48730 1366-1368 1.000000 86.0 rpl21-rpl32_p4 rpl21-rpl32 4 ACCCACATTTGCCTTCCATT ACACCTGTTTTAGCAGCTGG 20 20 45.0 50.0 58.0 58.4 0.0 17.1 0.419354 47853 48730 1365-1367 1.000000 86.0 rpl21-rpl32_p5 rpl21-rpl32 5 ATTTTCCTGGCTGAACCCAC GCTGGCTCTTGGGCTTTATA 20 20 50.0 50.0 58.4 57.7 0.0 0.0 0.715822 47853 48730 1364-1366 1.000000 83.6 rrn16-ompR_p1 rrn16-ompR 1 GAGCCAGGATCAAACTCTCC GCACTTACAACTTCGTAGCC 20 20 55.0 50.0 57.7 56.8 0.0 0.0 1.480184 67410 67940 577-597 1.000000 76.8 rrn16-ompR_p2 rrn16-ompR 2 TGCATGTGTTAGGCATACCG GCACTTACAACTTCGTAGCC 20 20 50.0 50.0 58.3 56.8 0.0 0.0 1.493698 67410 67940 611-631 1.000000 76.7 rrn16-ompR_p3 rrn16-ompR 3 GAGCCAGGATCAAACTCTCC GCACTTACAACTTCGTAGCCA 20 21 55.0 47.6 57.7 58.6 0.0 0.0 1.913994 67410 67940 577-597 1.000000 73.4 rrn16-ompR_p4 rrn16-ompR 4 GAGCCAGGATCAAACTCTCC TGCACTTACAACTTCGTAGCC 20 21 55.0 47.6 57.7 58.6 0.0 0.0 1.913994 67410 67940 578-598 1.000000 73.4 rrn16-ompR_p5 rrn16-ompR 5 TGCATGTGTTAGGCATACCG GCACTTACAACTTCGTAGCCA 20 21 50.0 47.6 58.3 58.6 0.0 0.0 1.927508 67410 67940 611-631 1.000000 73.2 ompR-psbD_p1 ompR-psbD 1 GTTGATGACGAGACCAGCAT CACCAATTTGACACCATCGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.034482 68592 68996 1426-1426 0.666667 68.2 ompR-psbD_p2 ompR-psbD 2 GTTGATGACGAGACCAGCAT TCTGCTGCATCACCATCTTC 20 20 50.0 50.0 58.0 58.0 0.0 1.3 0.049840 68592 68996 1790-1790 0.666667 68.0 ompR-psbD_p3 ompR-psbD 3 GTTGATGACGAGACCAGCAT AAACCAGCTAGCCTGTCCTA 20 20 50.0 50.0 58.0 58.0 0.0 12.1 0.063114 68592 68996 1605-1605 0.666667 67.9 ompR-psbD_p4 ompR-psbD 4 GTTGATGACGAGACCAGCAT AACCAGCTAGCCTGTCCTAA 20 20 50.0 50.0 58.0 58.0 0.0 12.1 0.063114 68592 68996 1604-1604 0.666667 67.9 ompR-psbD_p5 ompR-psbD 5 GTTGATGACGAGACCAGCAT TGTCAAGAAGTTGCAGCCTT 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.072873 68592 68996 1326-1326 0.666667 67.8 ycf65-groEL_p1 ycf65-groEL 1 CCACGTAATGATGCATGGGA ATTGTTCCTGGTGGTGGTTC 20 20 50.0 50.0 58.0 58.0 2.5 0.0 0.038689 73336 73953 1172-1173 1.000000 87.8 ycf65-groEL_p2 ycf65-groEL 2 CCACGTAATGATGCATGGGA GTTGATTTGCACAGATGGGC 20 20 50.0 50.0 58.0 58.0 2.5 0.0 0.034495 73336 73953 1134-1134 0.666667 68.9 ycf65-groEL_p3 ycf65-groEL 3 CCACGTAATGATGCATGGGA GATTGTTCCTGGTGGTGGTT 20 20 50.0 50.0 58.0 58.0 2.5 0.0 0.038689 73336 73953 1174-1174 0.666667 68.7 ycf65-groEL_p4 ycf65-groEL 4 CCACGTAATGATGCATGGGA CGGTGGTGTCGCTGTTATAA 20 20 50.0 50.0 58.0 58.0 2.5 0.0 0.035017 73336 73953 1285-1285 0.666667 68.6 ycf65-groEL_p5 ycf65-groEL 5 CCACGTAATGATGCATGGGA CTTTGTTGTCGCCATTGCAT 20 20 50.0 45.0 58.0 57.9 2.5 0.0 0.102902 73336 73953 1061-1061 0.666667 68.4 rps1_p1 rps1 1 CTTTCCTCGCAGTCACCTAC TCCATTGCCTTAACCCCTTG 20 20 55.0 50.0 58.0 57.8 0.0 0.0 0.232460 80728 81345 1294-1302 1.000000 86.1 rps1_p2 rps1 2 GCGGTTTATTTCTGTGGCAC TCCATTGCCTTAACCCCTTG 20 20 50.0 50.0 58.0 57.8 11.6 0.0 0.252941 80728 81345 1313-1321 1.000000 85.8 rps1_p3 rps1 3 GCGATATAGTTGCAGGCACT TCCATTGCCTTAACCCCTTG 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.359049 80728 81345 1038-1046 1.000000 85.1 rps1_p4 rps1 4 ACCCTTGCCTAGCAGAAGTA TCCATTGCCTTAACCCCTTG 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.277508 80728 81345 1340-1340 0.666667 65.3 rps1_p5 rps1 5 AGCCATAAGCCGGATTTTGT TCCATTGCCTTAACCCCTTG 20 20 45.0 50.0 57.9 57.8 19.3 0.0 0.374005 80728 81345 1594-1594 0.666667 64.7 rpl11-trnW-CCA_p1 rpl11-trnW-CCA 1 GAAAACGGCGCGAATGTTTA GTCGAGGGTTCAAGTCCTTC 20 20 45.0 55.0 58.0 57.9 12.1 0.0 0.128612 86172 86849 1143-1177 0.666667 70.7 rpl11-trnW-CCA_p2 rpl11-trnW-CCA 2 GAAAACGGCGCGAATGTTTA CCTATCCCTGAAGCAGCAAG 20 20 45.0 55.0 58.0 58.0 12.1 0.0 0.082334 86172 86849 1493-1529 0.666667 70.5 rpl11-trnW-CCA_p3 rpl11-trnW-CCA 3 TGCTTGTGCCAGTAGAACTG CCTATCCCTGAAGCAGCAAG 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.152535 86172 86849 1268-1304 0.666667 70.5 rpl11-trnW-CCA_p4 rpl11-trnW-CCA 4 GAAAACGGCGCGAATGTTTA GATTCCGATGCACCCTATCC 20 20 45.0 55.0 58.0 57.9 12.1 0.0 0.147491 86172 86849 1542-1542 0.333333 52.2 rpl11-trnW-CCA_p5 rpl11-trnW-CCA 5 GGCGGCGTTTTTAGAACAAA CCTATCCCTGAAGCAGCAAG 20 20 45.0 55.0 57.9 58.0 9.4 0.0 0.158010 86172 86849 1279-1279 0.333333 52.1 trnS-GCU-trnD-GUC_p1 trnS-GCU-trnD-GUC 1 GCGATACCTTAACGTCTAGACA TCTTCTCTTTTGTCAAATAAACA 22 23 45.5 26.1 57.5 52.5 22.4 0.0 11.020368 104175 104324 775-775 0.333333 13.3 trnS-GCU-trnD-GUC_p2 trnS-GCU-trnD-GUC 2 TGCGATACCTTAACGTCTAGAC TCTTCTCTTTTGTCAAATAAACA 22 23 45.5 26.1 57.5 52.5 13.2 0.0 11.020368 104175 104324 776-776 0.333333 13.3 trnS-GCU-trnD-GUC_p3 trnS-GCU-trnD-GUC 3 GCGATACCTTAACGTCTAGACA TCTTCTCTTTTGTCAAATAAACAA 22 24 45.5 25.0 57.5 53.3 22.4 0.0 11.195410 104175 104324 775-775 0.333333 13.3 trnS-GCU-trnD-GUC_p4 trnS-GCU-trnD-GUC 4 TGCGATACCTTAACGTCTAGAC TCTTCTCTTTTGTCAAATAAACAA 22 24 45.5 25.0 57.5 53.3 13.2 0.0 11.195410 104175 104324 776-776 0.333333 13.3 trnS-GCU-trnD-GUC_p5 trnS-GCU-trnD-GUC 5 GCGATACCTTAACGTCTAGACA ATCTTCTCTTTTGTCAAATAAACA 22 24 45.5 25.0 57.5 53.1 22.4 0.0 11.400470 104175 104324 776-776 0.333333 13.3 orf65-ycf45_p1 orf65-ycf45 1 TGCTTGACCACAATCCACAA AATGCTTCTAGCTCTGTGCC 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.099964 134678 136161 2832-2832 0.333333 52.5 orf65-ycf45_p2 orf65-ycf45 2 TGCTTGACCACAATCCACAA GGTACGAGCTGCTAATGCTT 20 20 45.0 50.0 57.9 58.1 0.0 0.2 0.123109 134678 136161 2845-2845 0.333333 52.3 orf65-ycf45_p3 orf65-ycf45 3 TGCTTGACCACAATCCACAA CCATCAGGAAATCGAGCCTC 20 20 45.0 55.0 57.9 58.1 0.0 1.6 0.188112 134678 136161 2328-2328 0.333333 51.8 orf65-ycf45_p4 orf65-ycf45 4 TGCTTGACCACAATCCACAA ATGGTACGAGCTGCTAATGC 20 20 45.0 50.0 57.9 58.1 0.0 0.2 0.193353 134678 136161 2847-2847 0.333333 51.8 orf65-ycf45_p5 orf65-ycf45 5 TGCTTGACCACAATCCACAA TGCTTCTAGCTCTGTGCCTA 20 20 45.0 50.0 57.9 58.1 0.0 0.0 0.211801 134678 136161 2830-2830 0.333333 51.6 psaD-acsF_p1 psaD-acsF 1 GCAGCTCTTAACCATCCTCC TGAGCACCGCATCTATCCTA 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.044207 138834 139668 1408-1459 0.666667 71.2 psaD-acsF_p2 psaD-acsF 2 AGTTGAGCTTGTCATGGCAA TGAGCACCGCATCTATCCTA 20 20 45.0 50.0 58.0 58.0 13.0 0.0 0.019151 138834 139668 2082-2134 0.666667 71.1 psaD-acsF_p3 psaD-acsF 3 CTCCTGTGCTTCCACCAAAT TGAGCACCGCATCTATCCTA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.089483 138834 139668 1392-1443 0.666667 70.9 psaD-acsF_p4 psaD-acsF 4 ACCAACTCTACCACCTCTCC TGAGCACCGCATCTATCCTA 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.064644 138834 139668 1850-1902 0.666667 70.8 psaD-acsF_p5 psaD-acsF 5 AGTTGAGCTTGTCATGGCAA CCCTGTAATGGCTGAATGCT 20 20 45.0 50.0 58.0 57.9 13.0 0.0 0.077497 138834 139668 2313-2365 0.666667 70.6 petA_p1 petA 1 AGCAACCGTCATTCATCCTC AGGGGCTATTCTTACACCTTC 20 21 50.0 47.6 58.0 56.8 0.0 0.0 2.246094 147988 148962 1721-1841 0.666667 60.7 petA_p2 petA 2 ATCTCGAGAAAGCAACCGTC AGGGGCTATTCTTACACCTTC 20 21 50.0 47.6 58.0 56.8 20.9 0.0 2.218587 147988 148962 1851-1851 0.333333 35.6 petA_p3 petA 3 ATCTCGAGAAAGCAACCGTC GGGGCTATTCTTACACCTTCT 20 21 50.0 47.6 58.0 56.8 20.9 0.0 2.218587 147988 148962 1850-1850 0.333333 35.6 petA_p4 petA 4 AGCAACCGTCATTCATCCTC GGGGCTATTCTTACACCTTCT 20 21 50.0 47.6 58.0 56.8 0.0 0.0 2.246094 147988 148962 1840-1840 0.333333 35.4 petA_p5 petA 5 ATCTCGAGAAAGCAACCGTC AGGGGCTATTCTTACACCTTCT 20 22 50.0 45.5 58.0 58.3 20.9 0.0 2.265068 147988 148962 1851-1851 0.333333 35.2 petA-tatC_p1 petA-tatC 1 GGTATGGGGCCTACAACAAG AAATTTTTGGCACCAGCAGC 20 20 55.0 45.0 57.9 58.4 0.8 0.0 0.456179 148963 149551 1407-1407 0.333333 49.7 petA-tatC_p2 petA-tatC 2 GGTATGGGGCCTACAACAAG CAGCTTGCTCCAGGTGAATA 20 20 55.0 50.0 57.9 57.6 0.8 4.8 0.461053 148963 149551 1605-1605 0.333333 49.6 petA-tatC_p3 petA-tatC 3 GCTTCAAAGACGCTGTTTGG AAATTTTTGGCACCAGCAGC 20 20 50.0 45.0 58.2 58.4 5.3 0.0 0.644614 148963 149551 1191-1191 0.333333 48.2 petA-tatC_p4 petA-tatC 4 GCTTCAAAGACGCTGTTTGG CAGCTTGCTCCAGGTGAATA 20 20 50.0 50.0 58.2 57.6 5.3 4.8 0.649488 148963 149551 1389-1389 0.333333 48.1 petA-tatC_p5 petA-tatC 5 TTATCTCCTGGTATGGGGCC AAATTTTTGGCACCAGCAGC 20 20 55.0 45.0 58.3 58.4 0.0 0.0 0.661089 148963 149551 1416-1416 0.333333 48.0 atpA-sufC_p1 atpA-sufC 1 GAGGCCTATCCAGGAGATGT AGCCGATTCTGGACTCGATA 20 20 55.0 50.0 58.0 58.0 4.4 11.0 0.040057 176058 177140 1969-2217 0.666667 70.4 atpA-sufC_p2 atpA-sufC 2 AGCAAGCACAAGCATATCGA AGCCGATTCTGGACTCGATA 20 20 45.0 50.0 58.0 58.0 0.0 11.0 0.045760 176058 177140 2025-2273 0.666667 70.3 atpA-sufC_p3 atpA-sufC 3 TGAAACAGGTCGCAGGAAAA AGCCGATTCTGGACTCGATA 20 20 45.0 50.0 58.0 58.0 0.0 11.0 0.062901 176058 177140 1695-1943 0.666667 70.2 atpA-sufC_p4 atpA-sufC 4 GAGGCCTATCCAGGAGATGT CTAAAGTCATCGCTGGGCAT 20 20 55.0 50.0 58.0 58.0 4.4 0.0 0.063676 176058 177140 2351-2599 0.666667 70.2 atpA-sufC_p5 atpA-sufC 5 GAGGCCTATCCAGGAGATGT TAAAGTCATCGCTGGGCATC 20 20 55.0 50.0 58.0 58.0 4.4 0.0 0.069159 176058 177140 2350-2598 0.666667 70.1 orf12_p1 orf12 1 AATAAGCATCTGTGGCCGAG CTCTCACACGTGTTGGACAA 20 20 50.0 50.0 58.0 58.1 0.0 20.8 0.106370 191611 192960 2356-2356 0.666667 70.2 orf12_p2 orf12 2 AATAAGCATCTGTGGCCGAG GGTCAGCATTTTCTTGTGGC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.111220 191611 192960 2589-2589 0.666667 70.1 orf12_p3 orf12 3 ACTCATGTGCGATCCGTTTT CTCTCACACGTGTTGGACAA 20 20 45.0 50.0 58.2 58.1 0.0 20.8 0.257001 191611 192960 2320-2320 0.666667 69.0 orf12_p4 orf12 4 AATAAGCATCTGTGGCCGAG ATTGGCACAGTTCTTGGGAG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.125818 191611 192960 2298-2298 0.333333 52.3 orf12_p5 orf12 5 AATAAGCATCTGTGGCCGAG CACGTGTTGGACAACCATTG 20 20 50.0 50.0 58.0 57.9 0.0 7.6 0.159187 191611 192960 2350-2350 0.333333 52.1