primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score psbA_p1 psbA 1 ACTGGGGGATTGTTACCTACA GTGCTTGGGAGTCCTTGAAA 21 20 47.6 50.0 58.1 58.0 0.0 9.6 1.094836 120 1181 1159-1159 1.000000 71.2 psbA_p2 psbA 2 ACTGGGGGATTGTTACCTACA TGAATACGTGTGCTTGGGAG 21 20 47.6 50.0 58.1 57.9 0.0 0.0 1.169399 120 1181 1168-1168 1.000000 70.6 psbA_p3 psbA 3 ACTGGGGGATTGTTACCTACA AATACGTGTGCTTGGGAGTC 21 20 47.6 50.0 58.1 57.9 0.0 0.0 1.170855 120 1181 1166-1166 1.000000 70.6 psbA_p4 psbA 4 ACTGGGGGATTGTTACCTACA GAATACGTGTGCTTGGGAGT 21 20 47.6 50.0 58.1 57.9 0.0 0.0 1.170855 120 1181 1167-1167 1.000000 70.6 psbA_p5 psbA 5 ACTGGGGGATTGTTACCTACA AGTGAATACGTGTGCTTGGG 21 20 47.6 50.0 58.1 58.2 0.0 0.0 1.267682 120 1181 1170-1170 1.000000 69.9 trnK(UUU)_p1 trnK(UUU) 1 CGGAACTAGTCGGATGGAGT AGTAGTGGTAGTGGTTCAATTCA 20 23 55.0 39.1 58.6 57.2 0.0 0.0 4.428113 1550 1669 193-193 1.000000 45.0 trnK(UUU)_p2 trnK(UUU) 2 CGGAACTAGTCGGATGGAGT AGTGGTAGTGGTTCAATTCA 20 20 55.0 40.0 58.6 54.2 0.0 0.0 4.431148 1550 1669 190-190 1.000000 45.0 trnK(UUU)_p3 trnK(UUU) 3 CGGAACTAGTCGGATGGAGT GGTTCAATTCATTTAGTCGTCCA 20 23 55.0 39.1 58.6 57.1 0.0 0.0 4.482613 1550 1669 181-181 1.000000 44.6 trnK(UUU)_p4 trnK(UUU) 4 CGGAACTAGTCGGATGGAGT TGGTTCAATTCATTTAGTCGTCC 20 23 55.0 39.1 58.6 57.1 0.0 0.0 4.482613 1550 1669 182-182 1.000000 44.6 trnK(UUU)_p5 trnK(UUU) 5 ACTCGAACCCGGAACTAGTC AGTAGTGGTAGTGGTTCAATTCA 20 23 55.0 39.1 58.8 57.2 0.7 0.0 4.646503 1550 1669 202-202 1.000000 43.2 matK-trnK(UUU)_p1 matK-trnK(UUU) 1 TCTTGCAGGAGAAGCGGATA GGTCCAGTTGATCAGTGCAA 20 20 50.0 50.0 58.5 58.1 0.0 0.0 0.618656 3468 4791 1512-1558 1.000000 75.4 matK-trnK(UUU)_p2 matK-trnK(UUU) 2 TCTTGCAGGAGAAGCGGATA TTGGTCCAGTTGATCAGTGC 20 20 50.0 50.0 58.5 58.1 0.0 0.0 0.618656 3468 4791 1514-1560 1.000000 75.4 matK-trnK(UUU)_p3 matK-trnK(UUU) 3 CTTGCAGGAGAAGCGGATAT GGTCCAGTTGATCAGTGCAA 20 20 50.0 50.0 57.5 58.1 0.0 0.0 0.644045 3468 4791 1511-1557 1.000000 75.2 matK-trnK(UUU)_p4 matK-trnK(UUU) 4 CTTGCAGGAGAAGCGGATAT TTGGTCCAGTTGATCAGTGC 20 20 50.0 50.0 57.5 58.1 0.0 0.0 0.644045 3468 4791 1513-1559 1.000000 75.2 matK-trnK(UUU)_p5 matK-trnK(UUU) 5 TCTTGCAGGAGAAGCGGATA ACGGTAGAGTACTCGGCTTT 20 20 50.0 50.0 58.5 58.2 0.0 17.1 0.683296 3468 4791 1433-1478 1.000000 74.9 psbD-trnT(GGU)_p1 psbD-trnT(GGU) 1 AGGAAAGAGCAATATGCCGG GTGGTAGAGTAACGCCATGG 20 20 50.0 55.0 58.0 58.1 0.0 7.6 0.091195 21367 22301 1113-1113 1.000000 79.3 psbD-trnT(GGU)_p2 psbD-trnT(GGU) 2 GGAAAGAGCAATATGCCGGA GTGGTAGAGTAACGCCATGG 20 20 50.0 55.0 58.0 58.1 5.0 7.6 0.096749 21367 22301 1112-1112 1.000000 79.3 psbD-trnT(GGU)_p3 psbD-trnT(GGU) 3 AGGAAAGAGCAATATGCCGG TCAGTGGTAGAGTAACGCCA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.113350 21367 22301 1116-1116 1.000000 79.2 psbD-trnT(GGU)_p4 psbD-trnT(GGU) 4 GGAAAGAGCAATATGCCGGA TCAGTGGTAGAGTAACGCCA 20 20 50.0 50.0 58.0 58.1 5.0 0.0 0.118904 21367 22301 1115-1115 1.000000 79.1 psbD-trnT(GGU)_p5 psbD-trnT(GGU) 5 GGACCAGCCTACAAAAACGA GTGGTAGAGTAACGCCATGG 20 20 50.0 55.0 58.1 58.1 0.0 7.6 0.177181 21367 22301 1095-1095 1.000000 78.7 rpoC2_p1 rpoC2 1 GAACTCTTGGCACGTTGTTG TTTCAATTGAAGTGCTTTAAGCA 20 23 50.0 30.4 57.9 55.9 9.0 16.3 5.252838 36600 36719 299-299 1.000000 40.3 rpoC2_p2 rpoC2 2 AACATCAGGGAACTCTTGGC TTTCAATTGAAGTGCTTTAAGCA 20 23 50.0 30.4 57.8 55.9 0.0 16.3 5.354091 36600 36719 308-308 1.000000 40.3 rpoC2_p3 rpoC2 3 AACTCTTGGCACGTTGTTGA TTTCAATTGAAGTGCTTTAAGCA 20 23 45.0 30.4 58.3 55.9 0.0 16.3 5.402283 36600 36719 298-298 1.000000 40.3 rpoC2_p4 rpoC2 4 ACTCTTGGCACGTTGTTGAA TTTCAATTGAAGTGCTTTAAGCA 20 23 45.0 30.4 58.3 55.9 0.0 16.3 5.402283 36600 36719 297-297 1.000000 40.3 rpoC2_p5 rpoC2 5 CTTGGCACGTTGTTGAATCG TTTCAATTGAAGTGCTTTAAGCA 20 23 50.0 30.4 58.3 55.9 0.0 16.3 5.473755 36600 36719 294-294 1.000000 40.3 rps4_p1 rps4 1 TACTTCAGCGAAAGGAGTGC TGCTTTGTGGATACTGTAGCT 20 21 50.0 42.9 57.9 57.0 6.2 2.8 2.061357 46368 46973 743-743 1.000000 63.6 rps4_p2 rps4 2 TCAGCGAAAGGAGTGCAAAT TGCTTTGTGGATACTGTAGCT 20 21 45.0 42.9 58.1 57.0 0.0 2.8 2.084852 46368 46973 739-739 1.000000 63.4 rps4_p3 rps4 3 TACTTCAGCGAAAGGAGTGC TGTGGATACTGTAGCTCAGAGT 20 22 50.0 45.5 57.9 58.0 6.2 16.8 2.110733 46368 46973 738-738 1.000000 63.2 rps4_p4 rps4 4 TCAGCGAAAGGAGTGCAAAT TGTGGATACTGTAGCTCAGAGT 20 22 45.0 45.5 58.1 58.0 0.0 16.8 2.134228 46368 46973 734-734 1.000000 63.0 rps4_p5 rps4 5 TACTTCAGCGAAAGGAGTGC GCTTTGTGGATACTGTAGCTCA 20 22 50.0 45.5 57.9 58.1 6.2 2.8 2.218446 46368 46973 742-742 1.000000 62.4 trnL(UAA)_p1 trnL(UAA) 1 CTGGATCCTTGTCTCAAACCA TCCAATGGTCTTTTTCTTGGGA 21 22 47.6 40.9 57.6 57.8 14.2 0.0 3.615344 48392 49143 798-802 1.000000 51.5 trnL(UAA)_p2 trnL(UAA) 2 ACTGGATCCTTGTCTCAAACC TCCAATGGTCTTTTTCTTGGGA 21 22 47.6 40.9 57.6 57.8 14.2 0.0 3.616966 48392 49143 799-803 1.000000 51.5 trnL(UAA)_p3 trnL(UAA) 3 CTGGATCCTTGTCTCAAACCA GTCCAATGGTCTTTTTCTTGGG 21 22 47.6 45.5 57.6 57.7 14.2 0.0 3.680807 48392 49143 799-803 1.000000 51.0 trnL(UAA)_p4 trnL(UAA) 4 ACTGGATCCTTGTCTCAAACC GTCCAATGGTCTTTTTCTTGGG 21 22 47.6 45.5 57.6 57.7 14.2 0.0 3.682429 48392 49143 800-804 1.000000 50.9 trnL(UAA)_p5 trnL(UAA) 5 TGGATCCTTGTCTCAAACCA TCCAATGGTCTTTTTCTTGGGA 20 22 45.0 40.9 56.4 57.8 14.2 0.0 3.833271 48392 49143 797-801 1.000000 49.7 rbcL-accD_p1 rbcL-accD 1 CTAGCAAATGGAGCCCTGAG CCCGCTAGCATCAAGACTAC 20 20 55.0 55.0 58.0 57.9 0.0 16.4 0.176983 58248 59122 1063-1063 1.000000 78.7 rbcL-accD_p2 rbcL-accD 2 CTAGCAAATGGAGCCCTGAG CCGCTAGCATCAAGACTACC 20 20 55.0 55.0 58.0 57.9 0.0 16.4 0.176983 58248 59122 1062-1062 1.000000 78.7 rbcL-accD_p3 rbcL-accD 3 CTAGCAAATGGAGCCCTGAG CGCTAGCATCAAGACTACCC 20 20 55.0 55.0 58.0 57.9 0.0 16.4 0.176983 58248 59122 1061-1061 1.000000 78.7 rbcL-accD_p4 rbcL-accD 4 TGAAGCTAGCAAATGGAGCC CCGCTAGCATCAAGACTACC 20 20 50.0 55.0 58.2 57.9 18.8 16.4 0.386356 58248 59122 1067-1067 1.000000 77.0 rbcL-accD_p5 rbcL-accD 5 TGAAGCTAGCAAATGGAGCC CGCTAGCATCAAGACTACCC 20 20 50.0 55.0 58.2 57.9 18.8 16.4 0.386356 58248 59122 1066-1066 1.000000 77.0 accD_p1 accD 1 TTAGGGGACAGAAAGGCTCT ACGTGCTACAACTACAAAGAAGT 20 23 50.0 39.1 57.7 58.3 0.0 0.0 3.653971 59123 60763 1718-1739 1.000000 51.7 accD_p2 accD 2 TTAGGGGACAGAAAGGCTCT ACGTGCTACAACTACAAAGAAG 20 22 50.0 40.9 57.7 56.7 0.0 0.0 3.658751 59123 60763 1718-1739 1.000000 51.7 accD_p3 accD 3 TTAGGGGACAGAAAGGCTCT CGTGCTACAACTACAAAGAAGT 20 22 50.0 40.9 57.7 56.7 0.0 0.0 3.658751 59123 60763 1717-1738 1.000000 51.7 accD_p4 accD 4 TTAGGGGACAGAAAGGCTCT ACGTGCTACAACTACAAAGA 20 20 50.0 40.0 57.7 54.7 0.0 0.0 3.664585 59123 60763 1718-1739 1.000000 51.7 accD_p5 accD 5 TTAGGGGACAGAAAGGCTCT ACGTGCTACAACTACAAAGAA 20 21 50.0 38.1 57.7 55.5 0.0 0.0 3.839450 59123 60763 1718-1739 1.000000 50.3 rpl20-rps12_p1 rpl20-rps12 1 TCCGAGCTATGTATCCTCGT AATCTCCTGCTCTTCGAGGA 20 20 50.0 50.0 57.4 57.8 8.2 0.0 0.714763 70861 71673 903-903 1.000000 74.4 rpl20-rps12_p2 rpl20-rps12 2 TCCGAGCTATGTATCCTCGT ACGAAATCTCCTGCTCTTCG 20 20 50.0 50.0 57.4 57.7 8.2 0.0 0.849087 70861 71673 907-907 1.000000 73.3 rpl20-rps12_p3 rpl20-rps12 3 TCCGAGCTATGTATCCTCGT CGCCATGCCAACCATTAAAC 20 20 50.0 50.0 57.4 58.4 8.2 0.0 0.923981 70861 71673 965-965 1.000000 72.7 rpl20-rps12_p4 rpl20-rps12 4 TCCGAGCTATGTATCCTCGT TGTCACGAAATCTCCTGCTC 20 20 50.0 50.0 57.4 57.6 8.2 0.0 0.933542 70861 71673 911-911 1.000000 72.6 rpl20-rps12_p5 rpl20-rps12 5 TCCGAGCTATGTATCCTCGT ATCTCCTGCTCTTCGAGGAT 20 20 50.0 50.0 57.4 57.6 8.2 0.0 0.943325 70861 71673 902-902 1.000000 72.5 petD_p1 petD 1 TGGATTATTTCAAAAATAAGGCATGT AGGGAAGATCCAGAAAAGGA 26 20 26.9 45.0 56.4 55.4 9.8 0.0 10.143086 79641 81100 1631-1631 1.000000 40.0 petD_p2 petD 2 AGTCTATTTTTCTAAAAGAGGATGGA AGGGAAGATCCAGAAAAGGA 26 20 30.8 45.0 56.1 55.4 6.7 0.0 10.459640 79641 81100 1544-1544 1.000000 40.0 petD_p3 petD 3 TGGATTATTTCAAAAATAAGGCATGTT AGGGAAGATCCAGAAAAGGA 27 20 25.9 45.0 57.0 55.4 9.8 0.0 10.549210 79641 81100 1631-1631 1.000000 40.0 petD_p4 petD 4 TGGATTATTTCAAAAATAAGGCATGT TCTAGGGAAGATCCAGAAAAGGA 26 23 26.9 43.5 56.4 58.0 9.8 0.0 10.590184 79641 81100 1634-1634 1.000000 40.0 petD_p5 petD 5 TGGATTATTTCAAAAATAAGGCATG AGGGAAGATCCAGAAAAGGA 25 20 28.0 45.0 54.9 55.4 9.8 0.0 10.664474 79641 81100 1631-1631 1.000000 40.0 rpoA_p1 rpoA 1 ACCGAAGATTCCAAACTCAT AGACGTGTGTAAAATTCAAGAGA 20 23 40.0 34.8 54.7 56.2 0.0 0.0 8.178379 81303 82322 1222-1223 1.000000 40.1 rpoA_p2 rpoA 2 TCATACCGAAGATTCCAAACTCA AGACGTGTGTAAAATTCAAGAGA 23 23 39.1 34.8 57.6 56.2 0.0 0.0 8.243325 81303 82322 1226-1227 1.000000 40.1 rpoA_p3 rpoA 3 ACCGAAGATTCCAAACTCATT AGACGTGTGTAAAATTCAAGAGA 21 23 38.1 34.8 55.5 56.2 0.0 0.0 8.337270 81303 82322 1222-1223 1.000000 40.1 rpoA_p4 rpoA 4 ACCGAAGATTCCAAACTCAT ACGTGTGTAAAATTCAAGAGATTCC 20 25 40.0 36.0 54.7 58.1 0.0 0.0 8.450729 81303 82322 1220-1221 1.000000 40.1 rpoA_p5 rpoA 5 ACCGAAGATTCCAAACTCAT CGTGTGTAAAATTCAAGAGATTCCA 20 25 40.0 36.0 54.7 58.1 0.0 0.0 8.451803 81303 82322 1219-1220 1.000000 40.1 ndhA_p1 ndhA 1 ATGGAATCTGTGGCGTTAGC TGAAGTCAAATAAATTGCCATCCA 20 24 50.0 33.3 58.3 57.4 0.0 0.0 4.933991 119689 120284 678-702 1.000000 43.7 ndhA_p2 ndhA 2 GCGTTAGCCCATGGGATTTT TGAAGTCAAATAAATTGCCATCCA 20 24 50.0 33.3 58.9 57.4 36.0 0.0 5.491133 119689 120284 666-690 1.000000 43.2 ndhA_p3 ndhA 3 ATGGAATCTGTGGCGTTAGC AGTCAAATAAATTGCCATCCAAGA 20 24 50.0 33.3 58.3 57.1 0.0 0.0 5.187343 119689 120284 675-699 1.000000 43.1 ndhA_p4 ndhA 4 ATGGAATCTGTGGCGTTAGC TGAAGTCAAATAAATTGCCATCCAA 20 25 50.0 32.0 58.3 58.0 0.0 0.0 5.333831 119689 120284 678-702 1.000000 43.1 ndhA_p5 ndhA 5 ATGGAATCTGTGGCGTTAGC TTGAAGTCAAATAAATTGCCATCCA 20 25 50.0 32.0 58.3 58.0 0.0 0.0 5.333831 119689 120284 679-703 1.000000 43.1 ndhD-ccsA_p1 ndhD-ccsA 1 TTCTCGATGGCTTCTCTTGC GTCCAAGGCACAAATTCAGC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.085997 122126 122438 622-629 1.000000 80.3 ndhD-ccsA_p2 ndhD-ccsA 2 CTCGATGGCTTCTCTTGCAT GTCCAAGGCACAAATTCAGC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.119434 122126 122438 620-627 1.000000 80.1 ndhD-ccsA_p3 ndhD-ccsA 3 TTCTCGATGGCTTCTCTTGC TTTTACCCAAGGTTTCGCCA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.084570 122126 122438 1100-1107 1.000000 79.9 ndhD-ccsA_p4 ndhD-ccsA 4 TTCTCGATGGCTTCTCTTGC AGGCATTCTTTCTGGAGCAG 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.141509 122126 122438 761-768 1.000000 79.7 ndhD-ccsA_p5 ndhD-ccsA 5 CTCGATGGCTTCTCTTGCAT TTTTACCCAAGGTTTCGCCA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.118006 122126 122438 1098-1105 1.000000 79.6 ccsA_p1 ccsA 1 GTCTGTCAGACGATGTTTTT CGAGTGGCGGCATACAAATA 20 20 40.0 50.0 53.9 58.4 17.0 17.2 4.523344 122439 123371 1089-1089 1.000000 43.9 ccsA_p2 ccsA 2 GTCTGTCAGACGATGTTTTT TGGCGGCATACAAATAGACA 20 20 40.0 45.0 53.9 57.3 17.0 8.0 4.801535 122439 123371 1085-1085 1.000000 41.7 ccsA_p3 ccsA 3 TCAAACGTTTTTCAAAAACTCGT CGAGTGGCGGCATACAAATA 23 20 30.4 50.0 56.6 58.4 20.8 17.2 4.810682 122439 123371 1131-1131 1.000000 41.6 ccsA_p4 ccsA 4 GTCTGTCAGACGATGTTTTTATGT CGAGTGGCGGCATACAAATA 24 20 37.5 50.0 57.5 58.4 17.0 17.2 4.890254 122439 123371 1089-1089 1.000000 41.0 ccsA_p5 ccsA 5 ACGTTTTTCAAAAACTCGTACA CGAGTGGCGGCATACAAATA 22 20 31.8 50.0 55.4 58.4 20.8 17.2 5.024774 122439 123371 1127-1127 1.000000 40.1 rpl32-ndhA_p1 rpl32-ndhA 1 CACAATGCATGGGAACGAAA GCGTGATTGGTTGGAACATG 20 20 45.0 50.0 57.3 58.0 5.9 0.0 0.740020 124417 125517 1631-1657 1.000000 75.3 rpl32-ndhA_p2 rpl32-ndhA 2 CACAATGCATGGGAACGAAA GCAATATCTCTCCGCGTGAT 20 20 45.0 50.0 57.3 57.9 5.9 4.9 0.792962 124417 125517 1644-1670 1.000000 74.9 rpl32-ndhA_p3 rpl32-ndhA 3 CACAATGCATGGGAACGAAA CAAGTCTTGTCCCCATTGCT 20 20 45.0 50.0 57.3 58.1 5.9 4.3 0.806133 124417 125517 1772-1798 1.000000 74.7 rpl32-ndhA_p4 rpl32-ndhA 4 CACAATGCATGGGAACGAAA TCAAGTCTTGTCCCCATTGC 20 20 45.0 50.0 57.3 58.1 5.9 12.3 0.811574 124417 125517 1773-1799 1.000000 74.7 rpl32-ndhA_p5 rpl32-ndhA 5 CACAATGCATGGGAACGAAA TGGGAAGTCCAATGGCAAAA 20 20 45.0 45.0 57.3 57.9 5.9 0.0 0.815374 124417 125517 2195-2221 1.000000 74.4