primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rpoC1_p1 rpoC1 1 GGAAGGCTTCCTCGATCTCT AACCAGACACTACTCCCGAA 20 20 55.0 50.0 58.6 58.0 33.9 0.0 0.596401 11752 14253 2667-2810 1.000000 82.9 rpoC1_p2 rpoC1 2 GGAAGGCTTCCTCGATCTCT AGTTTGGGCTCTAGAAGGGT 20 20 55.0 50.0 58.6 58.0 33.9 0.0 0.637311 11752 14253 2798-2941 1.000000 82.4 rpoC1_p3 rpoC1 3 GGAAGGCTTCCTCGATCTCT AGGAAGATCCAGACGAGGAG 20 20 55.0 55.0 58.6 57.9 33.9 0.0 0.656929 11752 14253 2840-2983 1.000000 82.2 rpoC1_p4 rpoC1 4 GGAAGGCTTCCTCGATCTCT GCGCCATTCTTACTGGAGAA 20 20 55.0 50.0 58.6 58.0 33.9 0.0 0.615206 11752 14253 2703-2846 0.833333 74.5 rpoC1_p5 rpoC1 5 GGAAGGCTTCCTCGATCTCT GGTTACGCAACAGCCTCTTA 20 20 55.0 50.0 58.6 57.9 33.9 0.1 0.679980 11752 14253 2861-2993 0.666667 67.8 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 AGGACTGAAAATCCTCGTGC TTGGCCTTTACGCAAAGACT 20 20 50.0 45.0 57.9 58.0 0.0 9.8 0.124945 37866 38379 616-632 1.000000 84.4 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 AGGACTGAAAATCCTCGTGC GTTGGCCTTTACGCAAAGAC 20 20 50.0 50.0 57.9 58.0 0.0 9.8 0.146887 37866 38379 617-633 1.000000 84.2 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 AGGACTGAAAATCCTCGTGC TGAGAGTTGGATTGGTTGGC 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.190905 37866 38379 631-647 1.000000 83.8 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 AGGACTGAAAATCCTCGTGC AGTTGGATTGGTTGGCCTTT 20 20 50.0 45.0 57.9 57.9 0.0 3.3 0.202244 37866 38379 627-643 1.000000 83.7 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 GACTGAAAATCCTCGTGCCA TTGGCCTTTACGCAAAGACT 20 20 50.0 45.0 58.2 58.0 0.0 9.8 0.215930 37866 38379 614-630 1.000000 83.7 psbT-psbB_p1 psbT-psbB 1 CAATGGAGTAGTGCCCCATC GGGGATGGAATAGCTGTTGG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.040246 71781 71974 1244-1256 1.000000 83.3 psbT-psbB_p2 psbT-psbB 2 CATCAATGGAGTAGTGCCCC GGGGATGGAATAGCTGTTGG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.040246 71781 71974 1247-1259 1.000000 83.3 psbT-psbB_p3 psbT-psbB 3 CGAGCGGATGTTCTGGTTTA GGGGATGGAATAGCTGTTGG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.017700 71781 71974 1367-1379 1.000000 83.1 psbT-psbB_p4 psbT-psbB 4 GCACGAGGACTAGTGGAAAG GGGGATGGAATAGCTGTTGG 20 20 55.0 55.0 58.0 58.0 13.2 0.0 0.015449 71781 71974 914-923 0.833333 76.7 psbT-psbB_p5 psbT-psbB 5 GCACGAGGACTAGTGGAAAG TGTACGTCGTATGCCTACCT 20 20 55.0 50.0 58.0 58.0 13.2 8.6 0.045017 71781 71974 846-855 0.833333 76.6 psbB-clpP_p1 psbB-clpP 1 CCCAACCGGAAACTAAAGCT GTCCAAGTACTAGCGGGTTG 20 20 50.0 55.0 58.1 58.0 9.5 0.0 0.100333 73502 74280 1258-1277 1.000000 88.5 psbB-clpP_p2 psbB-clpP 2 AGCCCAACCGGAAACTAAAG GTCCAAGTACTAGCGGGTTG 20 20 50.0 55.0 58.1 58.0 9.5 0.0 0.100333 73502 74280 1260-1279 1.000000 88.4 psbB-clpP_p3 psbB-clpP 3 AGGACGAACACTGAGATGGA GTCCAAGTACTAGCGGGTTG 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.081239 73502 74280 1827-1840 0.833333 78.1 psbB-clpP_p4 psbB-clpP 4 AGGACGAACACTGAGATGGA AGGACCCTGTTTCCGTTTTC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.098213 73502 74280 2068-2081 0.666667 69.9 psbB-clpP_p5 psbB-clpP 5 AGGACGAACACTGAGATGGA GGACCCTGTTTCCGTTTTCT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.098213 73502 74280 2067-2080 0.666667 69.9 clpP_p1 clpP 1 AGGGTGTTGAAAGACTTGGC CAGCGGTAATGTGGAAAGGA 20 20 50.0 50.0 58.3 57.9 0.0 0.0 0.415539 74281 75069 1268-1577 1.000000 88.7 clpP_p2 clpP 2 AGGGTGTTGAAAGACTTGGC AGCCTTTTTCTTGCCCAAGA 20 20 50.0 45.0 58.3 57.9 0.0 6.6 0.394200 74281 75069 1368-1677 1.000000 88.6 clpP_p3 clpP 3 AGGGTGTTGAAAGACTTGGC TTAGAGTACCGCCCTGTCAA 20 20 50.0 50.0 58.3 58.1 0.0 0.0 0.380102 74281 75069 979-991 0.833333 78.3 clpP_p4 clpP 4 AGGGTGTTGAAAGACTTGGC TAACCACGCGAATACCAAGG 20 20 50.0 50.0 58.3 58.0 0.0 15.9 0.320526 74281 75069 1503-1514 0.333333 51.1 clpP_p5 clpP 5 AGGGTGTTGAAAGACTTGGC GCGAATACCAAGGGCCTAAA 20 20 50.0 50.0 58.3 58.0 0.0 6.4 0.354591 74281 75069 1496-1507 0.333333 50.8 clpP-ycf1_p1 clpP-ycf1 1 CAACCCGCTAGTACTTGGAC GTGCAGCGATAAAAAGCGTT 20 20 55.0 45.0 58.0 58.0 0.0 0.0 0.042224 75070 75608 998-1295 1.000000 90.5 clpP-ycf1_p2 clpP-ycf1 2 CAACCCGCTAGTACTTGGAC CAGCGATAAAAAGCGTTGCA 20 20 55.0 45.0 58.0 58.0 0.0 0.0 0.043559 75070 75608 995-1292 1.000000 90.5 clpP-ycf1_p3 clpP-ycf1 3 CAACCCGCTAGTACTTGGAC TAACCACGCGAATACCAAGG 20 20 55.0 50.0 58.0 58.0 0.0 15.9 0.018907 75070 75608 989-1000 0.333333 53.7 clpP-ycf1_p4 clpP-ycf1 4 AGAAAACGGAAACAGGGTCC TAACCACGCGAATACCAAGG 20 20 50.0 50.0 58.0 58.0 0.0 15.9 0.035881 75070 75608 749-760 0.333333 53.7 clpP-ycf1_p5 clpP-ycf1 5 GAAAACGGAAACAGGGTCCT TAACCACGCGAATACCAAGG 20 20 50.0 50.0 58.0 58.0 0.0 15.9 0.035881 75070 75608 748-759 0.333333 53.7 ndhI-ndhG_p1 ndhI-ndhG 1 CAACAAGCAATACAGGCTGC TGAGACCTAGCGTTAGAGGG 20 20 50.0 55.0 58.0 57.9 15.9 8.0 0.067534 88228 88534 851-853 1.000000 87.5 ndhI-ndhG_p2 ndhI-ndhG 2 CAACAAGCAATACAGGCTGC TGCTATCTCCTACGGTCCAG 20 20 50.0 55.0 58.0 58.0 15.9 0.0 0.030642 88228 88534 1088-1090 1.000000 86.3 ndhI-ndhG_p3 ndhI-ndhG 3 CCTATCGCTTTGGGCAATCT TGCTATCTCCTACGGTCCAG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.044468 88228 88534 1295-1297 1.000000 85.6 ndhI-ndhG_p4 ndhI-ndhG 4 CACGGCGACTGGGTTTATAA TGCTATCTCCTACGGTCCAG 20 20 50.0 55.0 58.0 58.0 16.6 0.0 0.030277 88228 88534 1116-1116 0.833333 74.5 ndhI-ndhG_p5 ndhI-ndhG 5 CACGGCGACTGGGTTTATAA TGAGACCTAGCGTTAGAGGG 20 20 50.0 55.0 58.0 57.9 16.6 8.0 0.067169 88228 88534 879-879 0.833333 74.3 rpl32-ndhF_p1 rpl32-ndhF 1 CTTTTACTGCGGCTCGGTAT CCTATTGCCGCAGAAGCTAA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.110509 94065 94807 896-902 1.000000 84.9 rpl32-ndhF_p2 rpl32-ndhF 2 CGGTATGCTTTTCCCTTCCA CCTATTGCCGCAGAAGCTAA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.169224 94065 94807 882-888 1.000000 84.5 rpl32-ndhF_p3 rpl32-ndhF 3 GCTCGGTATGCTTTTCCCTT CCTATTGCCGCAGAAGCTAA 20 20 50.0 50.0 58.2 58.0 0.0 0.0 0.295004 94065 94807 885-891 1.000000 83.5 rpl32-ndhF_p4 rpl32-ndhF 4 CTTTTACTGCGGCTCGGTAT TAAAAGCGGAAGGAAAGGCA 20 20 50.0 45.0 58.1 57.7 0.0 0.0 0.344002 94065 94807 879-885 1.000000 83.1 rpl32-ndhF_p5 rpl32-ndhF 5 TTTTACTGCGGCTCGGTATG CCTATTGCCGCAGAAGCTAA 20 20 50.0 50.0 58.4 58.0 0.0 0.0 0.399095 94065 94807 895-901 1.000000 82.6 trnN-GUU-trnR-ACG_p1 trnN-GUU-trnR-ACG 1 GGCTGTTAACCGATTAGTCGT GTTCAAATCCCTCCTGGCTC 21 20 47.6 55.0 58.1 58.2 6.9 0.0 1.358743 97633 97717 146-151 0.833333 71.0 trnN-GUU-trnR-ACG_p2 trnN-GUU-trnR-ACG 2 GGCTGTTAACCGATTAGTCGT AGAGGATTAGAGCACGTGGT 21 20 47.6 50.0 58.1 58.1 6.9 22.1 1.261210 97633 97717 186-191 0.833333 70.0 trnN-GUU-trnR-ACG_p3 trnN-GUU-trnR-ACG 3 GGCTGTTAACCGATTAGTCGT CAGAGGATTAGAGCACGTGG 21 20 47.6 55.0 58.1 57.8 6.9 18.9 1.331080 97633 97717 187-192 0.833333 69.4 trnN-GUU-trnR-ACG_p4 trnN-GUU-trnR-ACG 4 GGCTGTTAACCGATTAGTCGT GCTGAGAGCGGATCAAGTAG 21 20 47.6 55.0 58.1 57.9 6.9 0.0 1.247913 97633 97717 224-229 0.833333 69.0 trnN-GUU-trnR-ACG_p5 trnN-GUU-trnR-ACG 5 GGCTGTTAACCGATTAGTCGT GAGCGGATCAAGTAGAGACG 21 20 47.6 55.0 58.1 57.6 6.9 0.0 1.508106 97633 97717 219-224 0.833333 67.0 trnI-GAU-rrn16_p1 trnI-GAU-rrn16 1 GGCACAACGACGCAATTATC CAAGGTAGCCGTACTGGAAG 20 20 50.0 55.0 58.2 57.7 0.0 7.8 0.485056 103628 104257 722-738 1.000000 83.4 trnI-GAU-rrn16_p2 trnI-GAU-rrn16 2 CGCTGATGAGCACATTGAAC CAAGGTAGCCGTACTGGAAG 20 20 50.0 55.0 57.8 57.7 4.7 7.8 0.464916 103628 104257 773-789 1.000000 83.1 trnI-GAU-rrn16_p3 trnI-GAU-rrn16 3 GGCACAACGACGCAATTATC AGTGACTGGAGTGAAGTCGT 20 20 50.0 50.0 58.2 58.3 0.0 0.0 0.496177 103628 104257 744-760 1.000000 83.1 trnI-GAU-rrn16_p4 trnI-GAU-rrn16 4 CGCTGATGAGCACATTGAAC AGTGACTGGAGTGAAGTCGT 20 20 50.0 50.0 57.8 58.3 4.7 0.0 0.476037 103628 104257 795-811 1.000000 82.8 trnI-GAU-rrn16_p5 trnI-GAU-rrn16 5 CGCTGATGAGCACATTGAAC AAGTCGTAACAAGGTAGCCG 20 20 50.0 50.0 57.8 57.6 4.7 0.0 0.528602 103628 104257 782-798 1.000000 82.5 rrn16-trnV-GAC_p1 rrn16-trnV-GAC 1 CATTGCGGAAAATTCCCCAC TCCGAAAATTCTTCACCGCA 20 20 50.0 45.0 58.0 58.1 6.6 0.0 0.123192 105743 107263 2312-2377 1.000000 90.8 rrn16-trnV-GAC_p2 rrn16-trnV-GAC 2 ATTCCGGATAACGCTTGCAT TCCGAAAATTCTTCACCGCA 20 20 45.0 45.0 58.0 58.1 4.1 0.0 0.147121 105743 107263 2474-2539 1.000000 90.1 rrn16-trnV-GAC_p3 rrn16-trnV-GAC 3 TGCCCCTACCATACTCTAGC TCCGAAAATTCTTCACCGCA 20 20 55.0 45.0 58.0 58.1 0.0 0.0 0.125562 105743 107263 2582-2647 1.000000 90.0 rrn16-trnV-GAC_p4 rrn16-trnV-GAC 4 TCGTCTCTCAGTGTCAGTGT TCCGAAAATTCTTCACCGCA 20 20 50.0 45.0 58.0 58.1 7.5 0.0 0.145736 105743 107263 2679-2744 1.000000 89.7 rrn16-trnV-GAC_p5 rrn16-trnV-GAC 5 CGTAGCCTTGGTAAGCCATT TCCGAAAATTCTTCACCGCA 20 20 50.0 45.0 58.0 58.1 0.0 0.0 0.152827 105743 107263 2217-2240 0.833333 83.2 trnV-GAC-rps12_p1 trnV-GAC-rps12 1 TCGTTGAACCGATGACCATC TCGAACCTGTTCCGAAAAGG 20 20 50.0 50.0 58.0 58.1 0.0 15.0 0.130885 107336 108265 2057-2123 0.666667 68.2 trnV-GAC-rps12_p2 trnV-GAC-rps12 2 TCGTTGAACCGATGACCATC TTTGACTCGAACCTGTTCCG 20 20 50.0 50.0 58.0 58.1 0.0 4.5 0.143907 107336 108265 2063-2129 0.666667 68.1 trnV-GAC-rps12_p3 trnV-GAC-rps12 3 TCGTTGAACCGATGACCATC GACTCGAACCTGTTCCGAAA 20 20 50.0 50.0 58.0 57.9 0.0 4.5 0.149064 107336 108265 2060-2126 0.666667 68.1 trnV-GAC-rps12_p4 trnV-GAC-rps12 4 TCGTTGAACCGATGACCATC CACTAGAACGCCCTTGTTGA 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.168401 107336 108265 1781-1848 0.666667 68.1 trnV-GAC-rps12_p5 trnV-GAC-rps12 5 TCGTTGAACCGATGACCATC ACTAGAACGCCCTTGTTGAC 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.169901 107336 108265 1780-1847 0.666667 68.1 ycf2-trnI-CAU_p1 ycf2-trnI-CAU 1 GCGTTTGTCTCGGGTCAT CCGCGACTTCCCAATTATGA 18 20 55.6 50.0 57.7 58.1 0.0 8.2 2.330852 119789 120217 469-602 1.000000 73.4 ycf2-trnI-CAU_p2 ycf2-trnI-CAU 2 GCGTTTGTCTCGGGTCAT GGGTGCTTTAACCATTCAGC 18 20 55.6 50.0 57.7 57.3 0.0 0.0 2.933706 119789 120217 446-579 1.000000 68.5 ycf2-trnI-CAU_p3 ycf2-trnI-CAU 3 GCGTTTGTCTCGGGTCAT GGTGCTTTAACCATTCAGCC 18 20 55.6 50.0 57.7 57.3 0.0 0.0 2.933706 119789 120217 445-578 1.000000 68.5 ycf2-trnI-CAU_p4 ycf2-trnI-CAU 4 GCGTTTGTCTCGGGTCAT TGAGTTGGGTGCTTTAACCA 18 20 55.6 45.0 57.7 57.3 0.0 0.0 3.017543 119789 120217 452-585 1.000000 67.9 ycf2-trnI-CAU_p5 ycf2-trnI-CAU 5 GCGTTTGTCTCGGGTCAT ATTGGAAGACCTGCATCCAG 18 20 55.6 50.0 57.7 57.6 0.0 6.1 2.710910 119789 120217 512-634 0.833333 61.4 chlL-trnH-GUG_p1 chlL-trnH-GUG 1 CCGATTCCGCCTTTTCCATA CAAGTGGTTAAGGCAGTGGA 20 20 50.0 50.0 58.0 57.7 0.0 0.0 0.308559 122894 123635 839-857 1.000000 83.8 chlL-trnH-GUG_p2 chlL-trnH-GUG 2 GGATTTACCGATTCCGCCTT CAAGTGGTTAAGGCAGTGGA 20 20 50.0 50.0 58.0 57.7 0.0 0.0 0.307180 122894 123635 846-864 1.000000 83.7 chlL-trnH-GUG_p3 chlL-trnH-GUG 3 ACGTCTGGCTAGAGCAATTG CAAGTGGTTAAGGCAGTGGA 20 20 50.0 50.0 58.0 57.7 0.0 0.0 0.286088 122894 123635 885-903 1.000000 83.6 chlL-trnH-GUG_p4 chlL-trnH-GUG 4 CACGTCTGGCTAGAGCAATT CAAGTGGTTAAGGCAGTGGA 20 20 50.0 50.0 58.0 57.7 0.0 0.0 0.286088 122894 123635 886-904 1.000000 83.6 chlL-trnH-GUG_p5 chlL-trnH-GUG 5 AACTGGTCGTGGATTTACCG CAAGTGGTTAAGGCAGTGGA 20 20 50.0 50.0 57.9 57.7 0.0 0.0 0.359302 122894 123635 856-874 1.000000 83.2 psbA-trnK-UUU_p1 psbA-trnK-UUU 1 GCTAGTGATCCAGTCGCAAA TAATCCACTCCATCCGACGA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.071654 125397 125888 602-613 1.000000 84.8 psbA-trnK-UUU_p2 psbA-trnK-UUU 2 GTGATCCAGTCGCAAAAACG TAATCCACTCCATCCGACGA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.111038 125397 125888 598-609 1.000000 84.5 psbA-trnK-UUU_p3 psbA-trnK-UUU 3 TGATCCAGTCGCAAAAACGA TAATCCACTCCATCCGACGA 20 20 45.0 50.0 58.1 57.9 0.0 0.0 0.189121 125397 125888 597-608 1.000000 83.9 psbA-trnK-UUU_p4 psbA-trnK-UUU 4 GCTAGTGATCCAGTCGCAAA GAAAGCCGTGTGCAATGAAA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.142885 125397 125888 673-684 1.000000 83.7 psbA-trnK-UUU_p5 psbA-trnK-UUU 5 GTGATCCAGTCGCAAAAACG GAAAGCCGTGTGCAATGAAA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.182268 125397 125888 669-680 1.000000 83.4 trnK-UUU-chlB_p1 trnK-UUU-chlB 1 AGTCGCACTTAAAAGCCGAG GCTAAAGAAGCGTTTGGTACC 20 21 50.0 47.6 58.6 57.5 6.4 4.4 2.037249 128380 129946 1636-2047 1.000000 75.7 trnK-UUU-chlB_p2 trnK-UUU-chlB 2 TAGTCGCACTTAAAAGCCGA GCTAAAGAAGCGTTTGGTACC 20 21 45.0 47.6 57.3 57.5 3.0 4.4 2.195402 128380 129946 1637-2048 1.000000 74.4 trnK-UUU-chlB_p3 trnK-UUU-chlB 3 TCGCACTTAAAAGCCGAGTA GCTAAAGAAGCGTTTGGTACC 20 21 45.0 47.6 57.3 57.5 3.0 4.4 2.195402 128380 129946 1634-2045 1.000000 74.4 trnK-UUU-chlB_p4 trnK-UUU-chlB 4 CGCACTTAAAAGCCGAGTAC GCTAAAGAAGCGTTTGGTACC 20 21 50.0 47.6 57.2 57.5 0.0 4.4 2.248910 128380 129946 1633-2044 1.000000 74.0 trnK-UUU-chlB_p5 trnK-UUU-chlB 5 GTCGCACTTAAAAGCCGAGT GCTAAAGAAGCGTTTGGTACC 20 21 50.0 47.6 58.9 57.5 6.4 4.4 2.320909 128380 129946 1635-2046 1.000000 73.4