feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score psbA gene psbA psbA 309 1370 -1 1062 LSC 0.014124 15 0 8 0 no 1.000000 2 1.000000 NA 1.000000 51.900000 IGS_001 igs psbA|matK psbA-matK 1371 1994 0 624 LSC 0.088339 50 58 56 75 yes 1.000000 2 1.000000 NA 0.907051 84.100000 matK gene matK matK 1995 3539 -1 1545 LSC 0.031311 48 12 26 9 no 1.000000 2 1.000000 NA 0.992233 63.100000 IGS_002 igs matK|trnQ-UUG matK-trnQ-UUG 3540 3951 0 412 LSC 0.066327 26 20 28 80 yes 1.000000 2 1.000000 NA 0.951456 77.000000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 3952 4023 -1 72 LSC 0.000000 0 0 34 8 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_003 igs trnQ-UUG|psbK trnQ-UUG-psbK 4024 4332 0 309 LSC 0.060811 18 13 106 25 no 1.000000 2 1.000000 NA 0.957929 73.400000 psbK gene psbK psbK 4333 4521 1 189 LSC 0.021164 4 0 5 1 no 1.000000 2 1.000000 NA 1.000000 49.700000 IGS_004 igs psbK|psbI psbK-psbI 4522 4876 0 355 LSC 0.098592 35 0 5 8 no 1.000000 2 1.000000 NA 1.000000 73.800000 psbI gene psbI psbI 4877 4987 1 111 LSC 0.036036 4 0 2 6 no 1.000000 2 1.000000 NA 1.000000 58.400000 IGS_005 igs psbI|trnS-GCU psbI-trnS-GCU 4988 5077 0 90 LSC 0.044444 4 0 15 47 no 1.000000 2 1.000000 NA 1.000000 64.200000 trnS-GCU tRNA trnS-GCU trnS-GCU 5078 5165 -1 88 LSC 0.034091 3 0 38 17 no 1.000000 2 1.000000 NA 1.000000 58.400000 IGS_006 igs trnS-GCU|trnR-UCU trnS-GCU-trnR-UCU 5166 5506 0 341 LSC 0.068592 19 64 18 87 no 1.000000 2 1.000000 NA 0.812317 70.100000 trnR-UCU tRNA trnR-UCU trnR-UCU 5507 5578 1 72 LSC 0.000000 0 0 30 15 no 0.000000 1 0.000000 NA 1.000000 19.900000 IGS_007 igs trnR-UCU|atpA trnR-UCU-atpA 5579 5890 0 312 LSC 0.057692 18 0 102 2 no 1.000000 2 1.000000 NA 1.000000 67.600000 atpA gene atpA atpA 5891 7405 -1 1515 LSC 0.023762 36 0 8 12 no 1.000000 2 1.000000 NA 1.000000 58.000000 IGS_008 igs atpA|atpF atpA-atpF 7406 7483 0 78 LSC 0.071429 5 8 29 30 no 1.000000 2 1.000000 NA 0.897436 73.600000 atpF gene atpF atpF 7484 8830 -1 1347 LSC 0.027108 36 19 33 17 no 1.000000 2 1.000000 NA 0.985895 61.900000 IGS_009 igs atpF|atpH atpF-atpH 8831 9153 0 323 LSC 0.037162 11 27 28 90 no 1.000000 2 1.000000 NA 0.916409 65.000000 atpH gene atpH atpH 9154 9399 -1 246 LSC 0.016260 4 0 145 46 no 1.000000 2 1.000000 NA 1.000000 50.300000 IGS_010 igs atpH|atpI atpH-atpI 9400 9496 0 97 LSC 0.072289 6 14 38 112 no 1.000000 2 1.000000 NA 0.855670 72.800000 atpI gene atpI atpI 9497 10252 -1 756 LSC 0.014550 11 0 22 3 no 1.000000 2 1.000000 NA 1.000000 52.300000 IGS_011 igs atpI|rps2 atpI-rps2 10253 10471 0 219 LSC 0.112150 24 5 29 62 yes 1.000000 2 1.000000 NA 0.977169 76.900000 rps2 gene rps2 rps2 10472 11182 -1 711 LSC 0.023910 17 0 25 2 no 1.000000 2 1.000000 NA 1.000000 57.600000 IGS_012 igs rps2|rpoC2 rps2-rpoC2 11183 11366 0 184 LSC 0.050000 9 4 23 4 no 1.000000 2 1.000000 NA 0.978261 68.500000 rpoC2 gene rpoC2 rpoC2 11367 15512 -1 4146 LSC 0.025326 105 0 36 13 no 1.000000 2 1.000000 NA 1.000000 54.400000 IGS_013 igs rpoC2|rpoB rpoC2-rpoB 15513 18595 0 3083 LSC 0.023982 73 39 78 21 no 1.000000 2 1.000000 NA 0.987350 57.000000 rpoB gene rpoB rpoB 18596 21814 -1 3219 LSC 0.017707 57 0 55 3 no 1.000000 2 1.000000 NA 1.000000 50.700000 IGS_014 igs rpoB|trnC-GCA rpoB-trnC-GCA 21815 22657 0 843 LSC 0.098847 60 236 20 93 yes 1.000000 2 1.000000 NA 0.720047 75.000000 trnC-GCA tRNA trnC-GCA trnC-GCA 22658 22728 1 71 LSC 0.000000 0 0 40 22 no 0.000000 1 0.000000 NA 1.000000 20.400000 IGS_015 igs trnC-GCA|petN trnC-GCA-petN 22729 22985 0 257 LSC 0.073930 19 0 111 92 no 1.000000 2 1.000000 NA 1.000000 76.100000 petN gene petN petN 22986 23075 1 90 LSC 0.000000 0 0 18 2 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_016 igs petN|psbM petN-psbM 23076 23566 0 491 LSC 0.045673 19 75 108 98 yes 1.000000 2 1.000000 NA 0.847251 76.200000 psbM gene psbM psbM 23567 23680 -1 114 LSC 0.026316 3 0 31 18 no 1.000000 2 1.000000 NA 1.000000 54.000000 IGS_017 igs psbM|trnD-GUC psbM-trnD-GUC 23681 24304 0 624 LSC 0.068106 41 22 8 26 yes 1.000000 2 1.000000 NA 0.964744 78.500000 trnD-GUC tRNA trnD-GUC trnD-GUC 24305 24378 -1 74 LSC 0.013514 1 0 1 15 no 1.000000 2 1.000000 NA 1.000000 45.300000 IGS_018 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 24379 24456 0 78 LSC 0.064103 5 0 47 10 no 1.000000 2 1.000000 NA 1.000000 68.800000 trnY-GUA tRNA trnY-GUA trnY-GUA 24457 24540 -1 84 LSC 0.011905 1 0 21 9 no 1.000000 2 1.000000 NA 1.000000 45.000000 IGS_019 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 24541 24607 0 67 LSC 0.078125 5 3 73 82 yes 1.000000 2 1.000000 NA 0.955224 79.100000 trnE-UUC tRNA trnE-UUC trnE-UUC 24608 24680 -1 73 LSC 0.000000 0 0 15 9 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_020 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 24681 24932 0 252 LSC 0.066390 16 11 88 30 no 1.000000 2 1.000000 NA 0.956349 74.400000 trnT-GGU tRNA trnT-GGU trnT-GGU 24933 25004 1 72 LSC 0.027778 2 0 7 24 no 1.000000 2 1.000000 NA 1.000000 54.000000 IGS_021 igs trnT-GGU|psbD trnT-GGU-psbD 25005 26120 0 1116 LSC 0.036117 32 230 16 62 no 1.000000 2 1.000000 NA 0.793907 65.200000 psbD gene psbD psbD 26121 27182 1 1062 LSC 0.007533 8 0 18 66 no 1.000000 2 1.000000 NA 1.000000 49.400000 psbC gene psbC psbC 27130 28551 1 1422 LSC 0.014065 20 0 295 17 no 1.000000 2 1.000000 NA 1.000000 53.100000 IGS_023 igs psbC|trnS-UGA psbC-trnS-UGA 28552 28776 0 225 LSC 0.035556 8 0 6 119 no 1.000000 2 1.000000 NA 1.000000 58.400000 trnS-UGA tRNA trnS-UGA trnS-UGA 28777 28869 -1 93 LSC 0.000000 0 0 6 26 no 0.000000 1 0.000000 NA 1.000000 19.200000 IGS_024 igs trnS-UGA|psbZ trnS-UGA-psbZ 28870 29171 0 302 LSC 0.079734 24 1 99 30 no 1.000000 2 1.000000 NA 0.996689 72.500000 psbZ gene psbZ psbZ 29172 29360 1 189 LSC 0.031746 6 0 0 65 no 1.000000 2 1.000000 NA 1.000000 55.800000 IGS_025 igs psbZ|trnG-GCC psbZ-trnG-GCC 29361 29607 0 247 LSC 0.096639 23 9 6 8 no 1.000000 2 1.000000 NA 0.963563 75.600000 trnG-GCC tRNA trnG-GCC trnG-GCC 29608 29678 1 71 LSC 0.028571 2 1 0 15 no 1.000000 2 1.000000 NA 0.985915 55.200000 IGS_026 igs trnG-GCC|trnM-CAU trnG-GCC-trnM-CAU 29679 29713 0 35 LSC 0.400000 8 15 58 84 no 1.000000 2 1.000000 NA 0.571429 71.500000 trnM-CAU tRNA trnM-CAU trnM-CAU 29714 29787 -1 74 LSC 0.000000 0 0 4 10 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_027 igs trnM-CAU|rps14 trnM-CAU-rps14 29788 29926 0 139 LSC 0.043165 6 0 78 30 no 1.000000 2 1.000000 NA 1.000000 64.600000 rps14 gene rps14 rps14 29927 30229 -1 303 LSC 0.029703 9 0 15 71 no 1.000000 2 1.000000 NA 1.000000 55.800000 IGS_028 igs rps14|psaB rps14-psaB 30230 30367 0 138 LSC 0.015152 2 6 39 24 no 1.000000 2 1.000000 NA 0.956522 52.100000 psaB gene psaB psaB 30368 32572 -1 2205 LSC 0.015420 34 0 11 270 no 1.000000 2 1.000000 NA 1.000000 52.000000 IGS_029 igs psaB|psaA psaB-psaA 32573 32603 0 31 LSC 0.000000 0 6 47 239 no 1.000000 2 1.000000 NA 0.806452 41.800000 psaA gene psaA psaA 32604 34856 -1 2253 LSC 0.012872 29 0 78 56 no 1.000000 2 1.000000 NA 1.000000 53.800000 IGS_030 igs psaA|ycf3 psaA-ycf3 34857 35388 0 532 LSC 0.040076 21 8 69 121 no 1.000000 2 1.000000 NA 0.984962 71.900000 ycf3 gene ycf3 ycf3 35389 37425 -1 2037 LSC 0.025615 51 46 29 28 no 1.000000 2 1.000000 NA 0.977418 61.600000 IGS_031 igs ycf3|trnS-GGA ycf3-trnS-GGA 37426 38095 0 670 LSC 0.075321 47 46 21 106 yes 1.000000 2 1.000000 NA 0.931343 80.900000 trnS-GGA tRNA trnS-GGA trnS-GGA 38096 38183 1 88 LSC 0.000000 0 0 36 18 no 0.000000 1 0.000000 NA 1.000000 20.100000 IGS_032 igs trnS-GGA|rps4 trnS-GGA-rps4 38184 38330 0 147 LSC 0.063380 9 5 124 126 yes 1.000000 2 1.000000 NA 0.965986 80.200000 rps4 gene rps4 rps4 38331 38936 -1 606 LSC 0.018152 11 0 17 18 no 1.000000 2 1.000000 NA 1.000000 55.500000 IGS_033 igs rps4|trnT-UGU rps4-trnT-UGU 38937 39330 0 394 LSC 0.042667 16 19 96 75 no 1.000000 2 1.000000 NA 0.951777 74.000000 trnT-UGU tRNA trnT-UGU trnT-UGU 39331 39403 -1 73 LSC 0.000000 0 0 50 2 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_034 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 39404 39705 0 302 LSC 0.026846 8 4 123 96 no 1.000000 2 1.000000 NA 0.986755 61.400000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 39706 39740 1 35 LSC 0.000000 0 0 35 61 no 0.000000 1 0.000000 NA 1.000000 21.400000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 40040 40094 1 55 LSC 0.054545 3 0 16 6 no 1.000000 2 1.000000 NA 1.000000 67.300000 IGS_037 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 40095 40313 0 219 LSC 0.034146 7 14 37 91 no 1.000000 2 1.000000 NA 0.936073 64.100000 trnF-GAA tRNA trnF-GAA trnF-GAA 40314 40386 1 73 LSC 0.000000 0 0 42 18 no 0.000000 1 0.000000 NA 1.000000 20.100000 IGS_038 igs trnF-GAA|trnM-CAU trnF-GAA-trnM-CAU 40387 40591 0 205 LSC 0.049261 10 2 115 5 no 1.000000 2 1.000000 NA 0.990244 67.100000 trnM-CAU tRNA trnM-CAU trnM-CAU 40592 40664 1 73 LSC 0.013699 1 0 12 39 no 1.000000 2 1.000000 NA 1.000000 46.300000 IGS_039 igs trnM-CAU|atpE trnM-CAU-atpE 40665 40889 0 225 LSC 0.033019 7 13 67 63 no 1.000000 2 1.000000 NA 0.942222 65.600000 atpE gene atpE atpE 40890 41291 -1 402 LSC 0.022388 9 0 26 26 no 1.000000 2 1.000000 NA 1.000000 54.400000 atpB gene atpB atpB 41288 42784 -1 1497 LSC 0.012692 19 0 10 43 no 1.000000 2 1.000000 NA 1.000000 51.800000 IGS_041 igs atpB|rbcL atpB-rbcL 42785 43550 0 766 LSC 0.058011 42 42 4 182 yes 1.000000 2 1.000000 NA 0.945170 78.100000 rbcL gene rbcL rbcL 43551 44978 1 1428 LSC 0.014706 21 0 86 12 no 1.000000 2 1.000000 NA 1.000000 53.100000 IGS_042 igs rbcL|accD rbcL-accD 44979 45592 0 614 LSC 0.039427 22 56 93 12 no 1.000000 2 1.000000 NA 0.908795 70.600000 accD gene accD accD 45593 47050 1 1458 LSC 0.023126 29 204 47 36 no 1.000000 2 1.000000 NA 0.860082 61.700000 IGS_043 igs accD|psaI accD-psaI 47051 47501 0 451 LSC 0.043165 12 173 10 120 no 1.000000 2 1.000000 NA 0.616408 59.600000 psaI gene psaI psaI 47502 47612 1 111 LSC 0.000000 0 0 6 9 no 0.000000 1 0.000000 NA 1.000000 19.200000 IGS_044 igs psaI|ycf4 psaI-ycf4 47613 47997 0 385 LSC 0.036011 13 24 117 47 no 1.000000 2 1.000000 NA 0.937662 67.700000 ycf4 gene ycf4 ycf4 47998 48558 1 561 LSC 0.010695 6 0 41 49 no 1.000000 2 1.000000 NA 1.000000 52.200000 IGS_045 igs ycf4|cemA ycf4-cemA 48559 48712 0 154 LSC 0.116883 18 0 24 11 no 1.000000 2 1.000000 NA 1.000000 73.300000 cemA gene cemA cemA 48713 49402 1 690 LSC 0.023188 16 0 23 5 no 1.000000 2 1.000000 NA 1.000000 57.500000 IGS_046 igs cemA|petA cemA-petA 49403 49628 0 226 LSC 0.037383 8 12 36 63 no 1.000000 2 1.000000 NA 0.946903 66.200000 petA gene petA petA 49629 50591 1 963 LSC 0.014538 14 0 93 37 no 1.000000 2 1.000000 NA 1.000000 54.900000 IGS_047 igs petA|psbJ petA-psbJ 50592 51017 0 426 LSC 0.027569 11 27 3 50 no 1.000000 2 1.000000 NA 0.936620 60.500000 psbJ gene psbJ psbJ 51018 51140 -1 123 LSC 0.016260 2 0 57 105 no 1.000000 2 1.000000 NA 1.000000 51.100000 IGS_048 igs psbJ|psbF psbJ-psbF 51141 51432 0 292 LSC 0.026217 7 25 14 15 no 1.000000 2 1.000000 NA 0.914384 57.200000 psbF gene psbF psbF 51433 51552 -1 120 LSC 0.016667 2 0 69 24 no 1.000000 2 1.000000 NA 1.000000 48.900000 IGS_049 igs psbF|psbE psbF-psbE 51553 51561 0 9 LSC 0.000000 0 0 71 15 no 0.000000 1 0.000000 NA 1.000000 19.900000 psbE gene psbE psbE 51562 51813 -1 252 LSC 0.027778 7 0 80 41 no 1.000000 2 1.000000 NA 1.000000 56.500000 IGS_050 igs psbE|petL psbE-petL 51814 52723 0 910 LSC 0.074954 41 363 17 84 no 1.000000 2 1.000000 NA 0.601099 68.200000 petL gene petL petL 52724 52819 1 96 LSC 0.010417 1 0 12 19 no 1.000000 2 1.000000 NA 1.000000 44.400000 IGS_051 igs petL|petG petL-petG 52820 52991 0 172 LSC 0.042945 7 9 11 105 no 1.000000 2 1.000000 NA 0.947674 67.500000 petG gene petG petG 52992 53105 1 114 LSC 0.008772 1 0 26 11 no 1.000000 2 1.000000 NA 1.000000 43.400000 IGS_052 igs petG|trnW-CCA petG-trnW-CCA 53106 53226 0 121 LSC 0.057851 7 0 8 84 no 1.000000 2 1.000000 NA 1.000000 67.800000 trnW-CCA tRNA trnW-CCA trnW-CCA 53227 53300 -1 74 LSC 0.000000 0 0 8 10 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_053 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 53301 53461 0 161 LSC 0.060000 6 61 82 24 no 1.000000 2 1.000000 NA 0.621118 62.100000 trnP-UGG tRNA trnP-UGG trnP-UGG 53462 53535 -1 74 LSC 0.027027 2 0 7 9 no 1.000000 2 1.000000 NA 1.000000 53.600000 IGS_054 igs trnP-UGG|psaJ trnP-UGG-psaJ 53536 53918 0 383 LSC 0.086580 20 152 26 29 no 1.000000 2 1.000000 NA 0.603133 65.300000 psaJ gene psaJ psaJ 53919 54074 1 156 LSC 0.019231 3 0 18 12 no 1.000000 2 1.000000 NA 1.000000 49.500000 IGS_055 igs psaJ|rps18 psaJ-rps18 54075 54414 0 340 LSC 0.077348 14 159 3 51 no 1.000000 2 1.000000 NA 0.532353 60.400000 rps18 gene rps18 rps18 54415 54720 1 306 LSC 0.019608 6 0 25 1 no 1.000000 2 1.000000 NA 1.000000 49.000000 IGS_056 igs rps18|rpl20 rps18-rpl20 54721 54929 0 209 LSC 0.033493 7 0 38 124 no 1.000000 2 1.000000 NA 1.000000 59.600000 rpl20 gene rpl20 rpl20 54930 55283 -1 354 LSC 0.022599 8 0 11 37 no 1.000000 2 1.000000 NA 1.000000 52.400000 IGS_057 igs rpl20|rps12 rpl20-rps12 55284 55927 0 644 LSC 0.027950 18 0 73 48 no 1.000000 2 1.000000 NA 1.000000 63.400000 rps12_part1 gene rps12 rps12 55928 56041 -1 114 LSC 0.008772 1 0 26 21 no 1.000000 2 1.000000 NA 1.000000 44.100000 IGS_058 igs rps12|clpP rps12-clpP 56042 56173 0 132 LSC 0.060606 8 0 65 63 no 1.000000 2 1.000000 NA 1.000000 72.300000 clpP gene clpP clpP 56174 58209 -1 2036 LSC 0.037520 69 197 8 62 no 1.000000 2 1.000000 NA 0.903242 67.900000 IGS_059 igs clpP|psbB clpP-psbB 58210 58655 0 446 LSC 0.045147 20 3 38 92 no 1.000000 2 1.000000 NA 0.993274 70.000000 psbB gene psbB psbB 58656 60182 1 1527 LSC 0.013098 20 0 13 13 no 1.000000 2 1.000000 NA 1.000000 52.200000 IGS_060 igs psbB|psbT psbB-psbT 60183 60355 0 173 LSC 0.063584 11 0 78 62 no 1.000000 2 1.000000 NA 1.000000 72.600000 psbT gene psbT psbT 60356 60463 1 108 LSC 0.009259 1 0 9 4 no 1.000000 2 1.000000 NA 1.000000 43.100000 IGS_061 igs psbT|psbN psbT-psbN 60464 60521 0 58 LSC 0.086207 5 0 45 18 no 1.000000 2 1.000000 NA 1.000000 72.100000 psbN gene psbN psbN 60522 60653 -1 132 LSC 0.015152 2 0 5 42 no 1.000000 2 1.000000 NA 1.000000 46.600000 IGS_062 igs psbN|psbH psbN-psbH 60654 60751 0 98 LSC 0.020408 2 0 47 29 no 1.000000 2 1.000000 NA 1.000000 51.400000 psbH gene psbH psbH 60752 60973 1 222 LSC 0.022523 5 0 2 8 no 1.000000 2 1.000000 NA 1.000000 50.600000 IGS_063 igs psbH|petB psbH-petB 60974 61096 0 123 LSC 0.060870 7 8 0 63 no 1.000000 2 1.000000 NA 0.934959 71.500000 petB gene petB petB 61097 62558 1 1462 LSC 0.030158 44 3 3 4 no 1.000000 2 1.000000 NA 0.997948 61.500000 IGS_064 igs petB|petD petB-petD 62559 62707 0 149 LSC 0.087591 12 12 12 46 no 1.000000 2 1.000000 NA 0.919463 75.000000 petD gene petD petD 62708 63942 1 1235 LSC 0.037985 46 24 20 96 no 1.000000 2 1.000000 NA 0.980567 68.900000 IGS_065 igs petD|rpoA petD-rpoA 63943 64175 0 233 LSC 0.040000 8 33 79 18 no 1.000000 2 1.000000 NA 0.858369 63.400000 rpoA gene rpoA rpoA 64176 65183 -1 1008 LSC 0.024802 25 0 32 53 no 1.000000 2 1.000000 NA 1.000000 60.400000 IGS_066 igs rpoA|rps11 rpoA-rps11 65184 65248 0 65 LSC 0.015385 1 0 11 8 no 1.000000 2 1.000000 NA 1.000000 46.900000 rps11 gene rps11 rps11 65249 65665 -1 417 LSC 0.019185 8 0 11 17 no 1.000000 2 1.000000 NA 1.000000 51.800000 IGS_067 igs rps11|rps8 rps11-rps8 65666 65803 0 138 LSC 0.101449 14 0 29 35 no 1.000000 2 1.000000 NA 1.000000 74.700000 rps8 gene rps8 rps8 65804 66211 -1 408 LSC 0.024510 10 0 6 49 no 1.000000 2 1.000000 NA 1.000000 54.300000 IGS_068 igs rps8|rpl14 rps8-rpl14 66212 66359 0 148 LSC 0.101351 15 0 32 35 no 1.000000 2 1.000000 NA 1.000000 74.900000 rpl14 gene rpl14 rpl14 66360 66728 -1 369 LSC 0.013550 5 0 29 7 no 1.000000 2 1.000000 NA 1.000000 47.300000 IGS_069 igs rpl14|rpl16 rpl14-rpl16 66729 66819 0 91 LSC 0.054945 5 0 62 2 no 1.000000 2 1.000000 NA 1.000000 67.000000 rpl16 gene rpl16 rpl16 66820 67617 -1 798 LSC 0.106469 79 56 7 2 yes 1.000000 2 1.000000 NA 0.929825 83.100000 IGS_070 igs rpl16|rps3 rpl16-rps3 67618 67723 0 106 LSC 0.040816 4 8 11 17 no 1.000000 2 1.000000 NA 0.924528 65.500000 rps3 gene rps3 rps3 67724 68380 -1 657 LSC 0.024353 16 0 3 4 no 1.000000 2 1.000000 NA 1.000000 58.000000 rpl22 gene rpl22 rpl22 68365 68835 -1 471 LSC 0.033970 16 0 13 1 no 1.000000 2 1.000000 NA 1.000000 60.700000 IGS_072 igs rpl22|rps19 rpl22-rps19 68836 68890 0 55 LSC 0.127273 7 0 70 6 no 1.000000 2 1.000000 NA 1.000000 73.000000 rps19 gene rps19 rps19 68891 69172 -1 282 LSC 0.035461 10 0 3 42 no 1.000000 2 1.000000 NA 1.000000 58.100000 IGS_073 igs rps19|rpl2 rps19-rpl2 69173 69279 0 107 LSC 0.180851 17 13 6 53 no 1.000000 2 1.000000 NA 0.878505 75.800000 rpl2 gene rpl2 rpl2 69280 70755 -1 1476 IRb 0.010163 15 0 2 134 no 1.000000 2 1.000000 NA 1.000000 49.700000 IGS_074 igs rpl2|rpl23 rpl2-rpl23 70756 70778 0 23 IRb 0.000000 0 0 28 111 no 0.000000 1 0.000000 NA 1.000000 20.900000 rpl23 gene rpl23 rpl23 70779 71060 -1 282 IRb 0.007092 2 0 51 150 no 1.000000 2 1.000000 NA 1.000000 45.400000 IGS_075 igs rpl23|trnI-CAU rpl23-trnI-CAU 71061 71225 0 165 IRb 0.006061 1 0 84 146 no 1.000000 2 1.000000 NA 1.000000 47.300000 trnI-CAU tRNA trnI-CAU trnI-CAU 71226 71299 -1 74 IRb 0.000000 0 0 14 72 no 0.000000 1 0.000000 NA 1.000000 19.800000 IGS_076 igs trnI-CAU|ycf2 trnI-CAU-ycf2 71300 71404 0 105 IRb 0.009524 1 0 88 164 no 1.000000 2 1.000000 NA 1.000000 49.600000 ycf2 gene ycf2 ycf2 71405 78145 1 6741 IRb 0.004599 31 0 32 14 no 1.000000 2 1.000000 NA 1.000000 41.200000 IGS_077 igs ycf2|trnL-CAA ycf2-trnL-CAA 78146 79061 0 916 IRb 0.014381 13 12 300 264 no 1.000000 2 1.000000 NA 0.986900 68.300000 trnL-CAA tRNA trnL-CAA trnL-CAA 79062 79142 -1 81 IRb 0.000000 0 0 48 183 no 0.000000 1 0.000000 NA 1.000000 22.400000 IGS_078 igs trnL-CAA|rps7 trnL-CAA-rps7 79143 80560 0 1418 IRb 0.012221 17 27 129 108 no 1.000000 2 1.000000 NA 0.980959 60.700000 rps7 gene rps7 rps7 80561 81028 -1 468 IRb 0.002137 1 0 39 191 no 1.000000 2 1.000000 NA 1.000000 45.200000 IGS_079 igs rps7|rps12 rps7-rps12 81029 81087 0 59 IRb 0.000000 0 0 300 132 no 0.000000 1 0.000000 NA 1.000000 28.600000 rps12_part2 gene rps12 rps12 81088 81887 -1 800 IRb 0.002532 2 10 300 66 no 1.000000 2 1.000000 NA 0.987500 51.400000 IGS_080 igs rps12|ycf15 rps12-ycf15 81888 82738 0 851 IRb 0.007299 6 29 117 41 no 1.000000 2 1.000000 NA 0.965922 54.300000 ycf15 gene ycf15 ycf15 82739 82969 -1 231 IRb 0.004484 1 8 300 99 no 1.000000 2 1.000000 NA 0.965368 50.800000 IGS_081 igs ycf15|trnV-GAC ycf15-trnV-GAC 82970 83615 0 646 IRb 0.009449 6 11 189 35 no 1.000000 2 1.000000 NA 0.982972 53.400000 trnV-GAC tRNA trnV-GAC trnV-GAC 83616 83687 1 72 IRb 0.013889 1 0 113 181 no 1.000000 2 1.000000 NA 1.000000 54.000000 IGS_082 igs trnV-GAC|rrn16S trnV-GAC-rrn16S 83688 83918 0 231 IRb 0.004525 1 10 36 198 no 1.000000 2 1.000000 NA 0.956710 47.000000 rrn16S rRNA rrn16S rrn16S 83919 85409 1 1491 IRb 0.001341 2 0 49 121 no 1.000000 2 1.000000 NA 1.000000 48.200000 IGS_083 igs rrn16S|trnA-UGC rrn16S-trnA-UGC 85410 85685 0 276 IRb 0.007246 2 0 300 2 no 1.000000 2 1.000000 NA 1.000000 41.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 85686 85704 1 19 IRb 0.052632 1 0 80 109 no 1.000000 2 1.000000 NA 1.000000 72.600000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 86067 86121 1 55 IRb 0.000000 0 0 252 68 no 0.000000 1 0.000000 NA 1.000000 23.800000 IGS_086 igs trnA-UGC|rrn23S trnA-UGC-rrn23S 86122 86269 0 148 IRb 0.006757 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.400000 rrn23S rRNA rrn23S rrn23S 86270 89081 1 2812 IRb 0.000711 2 1 79 300 no 1.000000 2 1.000000 NA 0.999644 47.400000 IGS_087 igs rrn23S|rrn4.5S rrn23S-rrn4.5S 89082 89180 0 99 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn4.5S rRNA rrn4.5S rrn4.5S 89181 89282 1 102 IRb 0.000000 0 0 300 208 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_088 igs rrn4.5S|rrn5S rrn4.5S-rrn5S 89283 89500 0 218 IRb 0.004587 1 0 300 130 no 1.000000 2 1.000000 NA 1.000000 49.900000 rrn5S rRNA rrn5S rrn5S 89501 89621 1 121 IRb 0.000000 0 0 9 9 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_089 igs rrn5S|trnR-ACG rrn5S-trnR-ACG 89622 89844 0 223 IRb 0.004545 1 3 130 91 no 1.000000 2 1.000000 NA 0.986547 48.200000 trnR-ACG tRNA trnR-ACG trnR-ACG 89845 89918 1 74 IRb 0.000000 0 0 213 17 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_090 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 89919 90475 0 557 IRb 0.009042 5 4 287 99 no 1.000000 2 1.000000 NA 0.992819 56.200000 trnN-GUU tRNA trnN-GUU trnN-GUU 90476 90547 -1 72 IRb 0.000000 0 0 85 27 no 0.000000 1 0.000000 NA 1.000000 20.800000 IGS_091 igs trnN-GUU|ycf1 trnN-GUU-ycf1 90548 90872 0 325 IRb 0.010239 3 32 157 213 no 1.000000 2 1.000000 NA 0.901538 59.000000 ycf1 gene ycf1 ycf1 90873 95891 1 5019 SSC 0.054705 268 120 27 26 yes 1.000000 2 1.000000 NA 0.976091 70.900000 IGS_092 igs ycf1|psaC ycf1-psaC 95892 96306 0 415 SSC 0.121711 37 111 5 38 yes 1.000000 2 1.000000 NA 0.732530 72.600000 psaC gene psaC psaC 96307 96552 1 246 SSC 0.044715 11 0 5 1 no 1.000000 2 1.000000 NA 1.000000 63.300000 IGS_093 igs psaC|ccsA psaC-ccsA 96553 96742 0 190 SSC 0.169399 31 7 21 8 yes 1.000000 2 1.000000 NA 0.963158 76.700000 ccsA gene ccsA ccsA 96743 97684 -1 942 SSC 0.057239 51 51 12 18 yes 1.000000 2 1.000000 NA 0.945860 78.600000 IGS_094 igs ccsA|trnL-UAG ccsA-trnL-UAG 97685 97793 0 109 SSC 0.089744 7 31 9 52 no 1.000000 2 1.000000 NA 0.715596 67.000000 trnL-UAG tRNA trnL-UAG trnL-UAG 97794 97873 -1 80 SSC 0.012500 1 0 9 3 no 1.000000 2 1.000000 NA 1.000000 44.900000 rps15 gene rps15 rps15 97799 98806 -1 1008 IRa 0.009036 9 12 14 27 no 1.000000 2 1.000000 NA 0.988095 51.100000 IGS_096 igs rps15|trnN-GUU rps15-trnN-GUU 98807 99131 0 325 IRa 0.010239 3 32 213 157 no 1.000000 2 1.000000 NA 0.901538 59.000000 trnN-GUU tRNA trnN-GUU trnN-GUU 99132 99203 1 72 IRa 0.000000 0 0 27 85 no 0.000000 1 0.000000 NA 1.000000 20.800000 IGS_097 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 99204 99760 0 557 IRa 0.009042 5 4 99 287 no 1.000000 2 1.000000 NA 0.992819 56.200000 trnR-ACG tRNA trnR-ACG trnR-ACG 99761 99834 -1 74 IRa 0.000000 0 0 17 213 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_098 igs trnR-ACG|rrn5S trnR-ACG-rrn5S 99835 100057 0 223 IRa 0.004545 1 3 91 130 no 1.000000 2 1.000000 NA 0.986547 48.200000 rrn5S rRNA rrn5S rrn5S 100058 100178 -1 121 IRa 0.000000 0 0 9 9 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_099 igs rrn5S|rrn4.5S rrn5S-rrn4.5S 100179 100396 0 218 IRa 0.004587 1 0 130 300 no 1.000000 2 1.000000 NA 1.000000 49.900000 rrn4.5S rRNA rrn4.5S rrn4.5S 100397 100498 -1 102 IRa 0.000000 0 0 208 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_100 igs rrn4.5S|rrn23S rrn4.5S-rrn23S 100499 100597 0 99 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23S rRNA rrn23S rrn23S 100598 103409 -1 2812 IRa 0.000711 2 1 300 79 no 1.000000 2 1.000000 NA 0.999644 47.400000 IGS_101 igs rrn23S|trnA-UGC rrn23S-trnA-UGC 103410 103577 0 168 IRa 0.005952 1 0 300 287 no 1.000000 2 1.000000 NA 1.000000 55.900000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 103578 103612 -1 35 IRa 0.000000 0 0 88 252 no 0.000000 1 0.000000 NA 1.000000 25.400000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 103955 103993 -1 39 IRa 0.027027 1 2 89 80 no 1.000000 2 1.000000 NA 0.948718 63.700000 IGS_104 igs trnA-UGC|rrn16S trnA-UGC-rrn16S 103994 104269 0 276 IRa 0.007246 2 0 2 300 no 1.000000 2 1.000000 NA 1.000000 41.800000 rrn16S rRNA rrn16S rrn16S 104270 105760 -1 1491 IRa 0.001341 2 0 121 49 no 1.000000 2 1.000000 NA 1.000000 48.200000 IGS_105 igs rrn16S|trnV-GAC rrn16S-trnV-GAC 105761 105991 0 231 IRa 0.004525 1 10 198 36 no 1.000000 2 1.000000 NA 0.956710 47.000000 trnV-GAC tRNA trnV-GAC trnV-GAC 105992 106063 -1 72 IRa 0.013889 1 0 181 113 no 1.000000 2 1.000000 NA 1.000000 54.000000 IGS_106 igs trnV-GAC|ycf15 trnV-GAC-ycf15 106064 106709 0 646 IRa 0.009449 6 11 35 189 no 1.000000 2 1.000000 NA 0.982972 53.400000 ycf15 gene ycf15 ycf15 106710 106940 1 231 IRa 0.004651 1 16 99 300 no 1.000000 2 1.000000 NA 0.930736 51.900000 IGS_107 igs ycf15|rps12 ycf15-rps12 106941 107791 0 851 IRa 0.007229 6 21 41 117 no 1.000000 2 1.000000 NA 0.975323 53.300000 rps12_part2 gene rps12 rps12 107792 108591 1 800 IRa 0.002532 2 10 66 300 no 1.000000 2 1.000000 NA 0.987500 51.400000 IGS_108 igs rps12|rps7 rps12-rps7 108592 108650 0 59 IRa 0.000000 0 0 132 300 no 0.000000 1 0.000000 NA 1.000000 28.600000 rps7 gene rps7 rps7 108651 109118 1 468 IRa 0.002137 1 0 191 39 no 1.000000 2 1.000000 NA 1.000000 45.200000 IGS_109 igs rps7|trnL-CAA rps7-trnL-CAA 109119 110536 0 1418 IRa 0.012221 17 27 108 129 no 1.000000 2 1.000000 NA 0.980959 60.700000 trnL-CAA tRNA trnL-CAA trnL-CAA 110537 110617 1 81 IRa 0.000000 0 0 183 48 no 0.000000 1 0.000000 NA 1.000000 22.400000 IGS_110 igs trnL-CAA|rpl23 trnL-CAA-rpl23 110618 118618 0 8001 IRa 0.005758 46 12 264 84 no 1.000000 2 1.000000 NA 0.998500 47.300000 rpl23 gene rpl23 rpl23 118619 118900 1 282 IRa 0.007092 2 0 150 51 no 1.000000 2 1.000000 NA 1.000000 45.400000 IGS_111 igs rpl23|psbA rpl23-psbA 118901 308 0 1589 IRa 0.015738 24 64 111 10 no 1.000000 2 1.000000 NA 0.959723 57.200000