primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-chlB_p1 trnK-UUU-chlB 1 AGTCGCACTTAAAAGCCGAG AGGTAATGCACGCAGCTAAA 20 20 50.0 45.0 58.6 57.9 6.4 0.0 0.678487 4109 4901 669-871 1.000000 79.4 trnK-UUU-chlB_p2 trnK-UUU-chlB 2 TAGTCGCACTTAAAAGCCGA AGGTAATGCACGCAGCTAAA 20 20 45.0 45.0 57.3 57.9 3.0 0.0 0.836640 4109 4901 670-872 1.000000 78.2 trnK-UUU-chlB_p3 trnK-UUU-chlB 3 TCGCACTTAAAAGCCGAGTA AGGTAATGCACGCAGCTAAA 20 20 45.0 45.0 57.3 57.9 3.0 0.0 0.836640 4109 4901 667-869 1.000000 78.2 trnK-UUU-chlB_p4 trnK-UUU-chlB 4 AGTCGCACTTAAAAGCCGAG CACGACGAAAGGGCATTTTG 20 20 50.0 50.0 58.6 58.3 6.4 10.2 0.885235 4109 4901 702-904 1.000000 77.7 trnK-UUU-chlB_p5 trnK-UUU-chlB 5 CGCACTTAAAAGCCGAGTAC AGGTAATGCACGCAGCTAAA 20 20 50.0 45.0 57.2 57.9 0.0 0.0 0.890148 4109 4901 666-868 1.000000 77.7 psbK-psbI_p1 psbK-psbI 1 GTTTGGCAAGCTGCTGTAAG GTTCGGTCACTATTGCGGAT 20 20 50.0 50.0 57.9 58.1 1.4 0.0 0.120162 7255 7742 701-706 1.000000 81.9 psbK-psbI_p2 psbK-psbI 2 TCAAACTTGCCGAAGAGCTT TTCTCTTCTTCATCTGCCGC 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.048417 7255 7742 1387-1398 1.000000 81.7 psbK-psbI_p3 psbK-psbI 3 GTTTGGCAAGCTGCTGTAAG TTCTCTTCTTCATCTGCCGC 20 20 50.0 50.0 57.9 58.0 1.4 0.0 0.071830 7255 7742 1148-1159 1.000000 81.7 psbK-psbI_p4 psbK-psbI 4 TCAAACTTGCCGAAGAGCTT GTTCGGTCACTATTGCGGAT 20 20 45.0 50.0 58.0 58.1 0.0 0.0 0.096749 7255 7742 940-948 1.000000 81.6 psbK-psbI_p5 psbK-psbI 5 GAATCATCCCTTCCAACCCC TTCTCTTCTTCATCTGCCGC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.088988 7255 7742 1415-1426 1.000000 81.3 psbJ-petA_p1 psbJ-petA 1 GGGAGTAAGAGAAATGGCCG TGTGGGTGGATTTGGTCAAG 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.051117 15399 16444 1333-1347 1.000000 81.5 psbJ-petA_p2 psbJ-petA 2 TGGAAGGATCCCTCTTTGGT TGTGGGTGGATTTGGTCAAG 20 20 50.0 50.0 57.9 58.0 8.6 0.0 0.065800 15399 16444 1306-1320 1.000000 81.4 psbJ-petA_p3 psbJ-petA 3 TGGCTTATGATGTGTTCGGG TGTGGGTGGATTTGGTCAAG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.043002 15399 16444 1845-1859 1.000000 81.2 psbJ-petA_p4 psbJ-petA 4 AATGCAGTTCATCCAGCGAT TGTGGGTGGATTTGGTCAAG 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.054488 15399 16444 1610-1624 1.000000 81.2 psbJ-petA_p5 psbJ-petA 5 CCGGCCGAATGAGTATTTCA TGTGGGTGGATTTGGTCAAG 20 20 50.0 50.0 58.1 58.0 30.7 0.0 0.057940 15399 16444 1820-1834 1.000000 81.1 ycf4-psaI_p1 ycf4-psaI 1 CCAGAAAGAGGATACAAGCCC CGGCTTATTACTTCCGGCAA 21 20 52.4 50.0 58.1 58.3 0.0 0.0 1.416585 19806 20371 727-727 1.000000 70.8 ycf4-psaI_p2 ycf4-psaI 2 CCCAGAAAGAGGATACAAGCC CGGCTTATTACTTCCGGCAA 21 20 52.4 50.0 58.1 58.3 0.0 0.0 1.416585 19806 20371 728-728 1.000000 70.8 ycf4-psaI_p3 ycf4-psaI 3 CCAGAAAGAGGATACAAGCCC GTCGGCTTATTACTTCCGGC 21 20 52.4 55.0 58.1 58.8 0.0 0.0 1.860334 19806 20371 729-729 1.000000 67.2 ycf4-psaI_p4 ycf4-psaI 4 CCCAGAAAGAGGATACAAGCC GTCGGCTTATTACTTCCGGC 21 20 52.4 55.0 58.1 58.8 0.0 0.0 1.860334 19806 20371 730-730 1.000000 67.2 ycf4-psaI_p5 ycf4-psaI 5 CCTAGTGAACCCAGAAAGAGG CGGCTTATTACTTCCGGCAA 21 20 52.4 50.0 57.4 58.3 0.0 0.0 1.959697 19806 20371 737-737 1.000000 66.4 psaI-accD_p1 psaI-accD 1 TTGCCGGAAGTAATAAGCCG TTGATCTGATCGTTCCACGT 20 20 50.0 45.0 58.3 57.0 5.0 12.7 1.371157 20483 21032 675-717 1.000000 74.5 psaI-accD_p2 psaI-accD 2 TTGCCGGAAGTAATAAGCCG CAGCTTTACAGTCTTCCTCGT 20 21 50.0 47.6 58.3 57.7 5.0 0.0 1.646404 20483 21032 622-664 1.000000 72.4 psaI-accD_p3 psaI-accD 3 TTGCCGGAAGTAATAAGCCG TTTGATCTGATCGTTCCACGT 20 21 50.0 42.9 58.3 57.7 5.0 12.7 1.654019 20483 21032 676-718 1.000000 72.3 psaI-accD_p4 psaI-accD 4 GCCGGAAGTAATAAGCCGAC TTGATCTGATCGTTCCACGT 20 20 55.0 45.0 58.8 57.0 5.0 12.7 1.814906 20483 21032 673-715 1.000000 71.0 psaI-accD_p5 psaI-accD 5 CCGGAAGTAATAAGCCGACT TTGATCTGATCGTTCCACGT 20 20 50.0 45.0 57.1 57.0 0.0 12.7 1.915044 20483 21032 672-714 1.000000 70.2 trnV-UAC-trnH-GUG_p1 trnV-UAC-trnH-GUG 1 TGCATGTTGGGTTCTTGGAA TTCACAATCCACTGCCTTGG 20 20 45.0 50.0 57.9 58.4 0.0 0.0 0.459515 27688 30373 2426-2836 1.000000 81.7 trnV-UAC-trnH-GUG_p2 trnV-UAC-trnH-GUG 2 GCCCAATGCGATAAAATGCA TTCACAATCCACTGCCTTGG 20 20 45.0 50.0 57.8 58.4 0.0 0.0 0.602353 27688 30373 2442-2852 1.000000 80.5 trnV-UAC-trnH-GUG_p3 trnV-UAC-trnH-GUG 3 ATGCATGTTGGGTTCTTGGA TTCACAATCCACTGCCTTGG 20 20 45.0 50.0 57.7 58.4 0.0 0.0 0.687842 27688 30373 2427-2837 1.000000 79.9 trnV-UAC-trnH-GUG_p4 trnV-UAC-trnH-GUG 4 GCATGTTGGGTTCTTGGAAC TTCACAATCCACTGCCTTGG 20 20 50.0 50.0 57.6 58.4 0.0 0.0 0.819214 27688 30373 2425-2835 1.000000 78.8 trnV-UAC-trnH-GUG_p5 trnV-UAC-trnH-GUG 5 TGCATGTTGGGTTCTTGGAA CACAATCCACTGCCTTGGT 20 19 45.0 52.6 57.9 58.0 0.0 0.8 1.120135 27688 30373 2424-2834 1.000000 76.4 trnT-GGU-psaM_p1 trnT-GGU-psaM 1 GAACCGATGACTTACGCCTT GCCAGGCAGGTCAGAAAAA 20 19 50.0 52.6 58.0 58.3 0.0 6.5 1.273682 30644 31904 1393-1436 1.000000 74.2 trnT-GGU-psaM_p2 trnT-GGU-psaM 2 TACCGCTGAGTTAAAAGGGC GCCAGGCAGGTCAGAAAAA 20 19 50.0 52.6 57.9 58.3 0.0 6.5 1.371248 30644 31904 1358-1401 1.000000 73.6 trnT-GGU-psaM_p3 trnT-GGU-psaM 3 CCGATGACTTACGCCTTACC GCCAGGCAGGTCAGAAAAA 20 19 55.0 52.6 58.2 58.3 0.0 6.5 1.418614 30644 31904 1390-1433 1.000000 73.1 trnT-GGU-psaM_p4 trnT-GGU-psaM 4 TTGAACCGATGACTTACGCC GCCAGGCAGGTCAGAAAAA 20 19 50.0 52.6 58.3 58.3 0.0 6.5 1.550517 30644 31904 1395-1438 1.000000 72.0 trnT-GGU-psaM_p5 trnT-GGU-psaM 5 CGATGACTTACGCCTTACCA GCCAGGCAGGTCAGAAAAA 20 19 50.0 52.6 57.4 58.3 0.0 6.5 1.839902 30644 31904 1389-1432 1.000000 69.7 ycf12-psbB_p1 ycf12-psbB 1 CCGTCAGAGTCAGAACAGTG TATGAACGCGATACCAAGGC 20 20 55.0 50.0 57.9 58.1 0.0 15.9 0.196827 53571 54251 755-882 1.000000 83.6 ycf12-psbB_p2 ycf12-psbB 2 CCGTCAGAGTCAGAACAGTG CAGAAATTAACCGGCCAGGA 20 20 55.0 50.0 57.9 57.9 0.0 18.7 0.180286 53571 54251 791-918 1.000000 83.5 ycf12-psbB_p3 ycf12-psbB 3 CCGTCAGAGTCAGAACAGTG CGGTATGAACGCGATACCAA 20 20 55.0 50.0 57.9 58.2 0.0 26.0 0.214783 53571 54251 758-885 1.000000 83.4 ycf12-psbB_p4 ycf12-psbB 4 TGAGCTGCGCAATAACTTCT CAGAAATTAACCGGCCAGGA 20 20 45.0 50.0 57.9 57.9 13.1 18.7 0.221925 53571 54251 773-900 1.000000 83.2 ycf12-psbB_p5 ycf12-psbB 5 CTAATGGGCCCGATACAACC CAGAAATTAACCGGCCAGGA 20 20 55.0 50.0 58.1 57.9 19.4 18.7 0.230574 53571 54251 809-936 1.000000 83.0 trnI-CAU-trnF-GAA_p1 trnI-CAU-trnF-GAA 1 GTTGGGCGCTTTAACCATTC AGGACTGAAAATCCTCGTGC 20 20 50.0 50.0 58.0 57.9 7.6 0.0 0.109805 67827 69662 1914-1919 1.000000 80.5 trnI-CAU-trnF-GAA_p2 trnI-CAU-trnF-GAA 2 GTTGGGCGCTTTAACCATTC GACTGAAAATCCTCGTGCCA 20 20 50.0 50.0 58.0 58.2 7.6 0.0 0.200790 67827 69662 1912-1917 1.000000 79.8 trnI-CAU-trnF-GAA_p3 trnI-CAU-trnF-GAA 3 GTTGGGCGCTTTAACCATTC ACCCTGTACCTGGATGATCC 20 20 50.0 55.0 58.0 58.2 7.6 4.0 0.201387 67827 69662 1971-1976 1.000000 79.7 trnI-CAU-trnF-GAA_p4 trnI-CAU-trnF-GAA 4 GTTGGGCGCTTTAACCATTC CCCTGTACCTGGATGATCCA 20 20 50.0 55.0 58.0 58.2 7.6 14.4 0.202705 67827 69662 1970-1975 1.000000 79.7 trnI-CAU-trnF-GAA_p5 trnI-CAU-trnF-GAA 5 CCCGCGAGTTCACCAATTAT AGGACTGAAAATCCTCGTGC 20 20 50.0 50.0 58.3 57.9 8.2 0.0 0.436910 67827 69662 1936-1941 1.000000 77.9 ycf3-psaA_p1 ycf3-psaA 1 CTCCGGGCAATTACATCGAA GGCCTTTAGCTAGCGTCTTT 20 20 50.0 50.0 58.1 58.0 0.0 9.5 0.077484 75069 75692 798-808 1.000000 81.4 ycf3-psaA_p2 ycf3-psaA 2 TCCGGGCAATTACATCGAAG GGCCTTTAGCTAGCGTCTTT 20 20 50.0 50.0 58.1 58.0 0.0 9.5 0.077484 75069 75692 797-807 1.000000 81.4 ycf3-psaA_p3 ycf3-psaA 3 CAGGACGCTTTGGAGAATGA GGCCTTTAGCTAGCGTCTTT 20 20 50.0 50.0 57.9 58.0 0.0 9.5 0.124730 75069 75692 756-766 1.000000 81.1 ycf3-psaA_p4 ycf3-psaA 4 GCTGCTGAGTATTGGGAACA GGCCTTTAGCTAGCGTCTTT 20 20 50.0 50.0 57.9 58.0 0.0 9.5 0.139449 75069 75692 832-842 1.000000 80.8 ycf3-psaA_p5 ycf3-psaA 5 ACAGGACGCTTTGGAGAATG GGCCTTTAGCTAGCGTCTTT 20 20 50.0 50.0 58.2 58.0 0.0 9.5 0.212075 75069 75692 757-767 1.000000 80.4 psbD-trnT-GGU_p1 psbD-trnT-GGU 1 CCCACAAAAACGAAACGGTC GGTTCAAGTCCGGTAAAGGG 20 20 50.0 55.0 58.2 58.2 0.0 0.0 0.352556 84451 85763 1420-1445 1.000000 79.5 psbD-trnT-GGU_p2 psbD-trnT-GGU 2 CCCACAAAAACGAAACGGTC GGCGTAAGTCATCGGTTCAA 20 20 50.0 50.0 58.2 58.3 0.0 0.0 0.452720 84451 85763 1433-1458 1.000000 78.7 psbD-trnT-GGU_p3 psbD-trnT-GGU 3 AACCCACAAAAACGAAACGG GGTTCAAGTCCGGTAAAGGG 20 20 45.0 55.0 57.7 58.2 0.0 0.0 0.463783 84451 85763 1422-1447 1.000000 78.6 psbD-trnT-GGU_p4 psbD-trnT-GGU 4 CCCACAAAAACGAAACGGTC CATCGGTTCAAGTCCGGTAA 20 20 50.0 50.0 58.2 57.6 0.0 0.0 0.543454 84451 85763 1424-1449 1.000000 77.9 psbD-trnT-GGU_p5 psbD-trnT-GGU 5 CGTAGCCAGTCATCAACAGT GGTTCAAGTCCGGTAAAGGG 20 20 50.0 55.0 57.6 58.2 0.0 0.0 0.552924 84451 85763 1396-1421 1.000000 77.9 trnR-ACG-trnN-GUU_p1 trnR-ACG-trnN-GUU 1 GGGACTCTTGGGAACGAATC TCTAACCCTCCGTTGTTCCT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.045396 93832 94571 928-933 1.000000 80.9 trnR-ACG-trnN-GUU_p2 trnR-ACG-trnN-GUU 2 GGGACTCTTGGGAACGAATC GCTGTTAACTGACTGGTCGT 20 20 55.0 50.0 58.0 57.8 0.0 15.9 0.175986 93832 94571 883-888 1.000000 79.9 trnR-ACG-trnN-GUU_p3 trnR-ACG-trnN-GUU 3 GGGACTCTTGGGAACGAATC TGGTCGTAGGTTCGAATCCT 20 20 55.0 50.0 58.0 58.2 0.0 18.9 0.182220 93832 94571 870-875 1.000000 79.9 trnR-ACG-trnN-GUU_p4 trnR-ACG-trnN-GUU 4 GGGACTCTTGGGAACGAATC CTGGTCGTAGGTTCGAATCC 20 20 55.0 55.0 58.0 57.8 0.0 4.4 0.230895 93832 94571 871-876 1.000000 79.5 trnR-ACG-trnN-GUU_p5 trnR-ACG-trnN-GUU 5 CAGAGGATTAGAGCACGTGG TCTAACCCTCCGTTGTTCCT 20 20 55.0 50.0 57.8 58.0 18.9 0.0 0.235714 93832 94571 885-890 1.000000 79.5 ycf1_p1 ycf1 1 GCAGCTGTGATGGAACCTTA ACATTGTCTCTTCGCGTCTC 20 20 50.0 50.0 57.9 58.0 16.6 5.8 0.129888 101944 102093 482-698 1.000000 86.4 ycf1_p2 ycf1 2 GCAGCTGTGATGGAACCTTA CATTGTCTCTTCGCGTCTCA 20 20 50.0 50.0 57.9 58.0 16.6 5.8 0.131248 101944 102093 481-697 1.000000 86.4 ycf1_p3 ycf1 3 ACCGGTACAACATATCCCCA ACATTGTCTCTTCGCGTCTC 20 20 50.0 50.0 58.1 58.0 4.5 5.8 0.133719 101944 102093 613-829 1.000000 85.8 ycf1_p4 ycf1 4 ACCGGTACAACATATCCCCA CATTGTCTCTTCGCGTCTCA 20 20 50.0 50.0 58.1 58.0 4.5 5.8 0.135079 101944 102093 612-828 1.000000 85.8 ycf1_p5 ycf1 5 GCAGCTGTGATGGAACCTTA TTACCGGCTTTATCGTTCCG 20 20 50.0 50.0 57.9 58.1 16.6 0.0 0.188631 101944 102093 752-968 1.000000 85.5 psaC-ccsA_p1 psaC-ccsA 1 TTGTACCCAATGCGTACGAG GGAGCAATATGGGCCAATGA 20 20 50.0 50.0 58.0 58.0 21.7 11.9 0.001304 105845 107780 2147-2394 1.000000 85.3 psaC-ccsA_p2 psaC-ccsA 2 TTGTACCCAATGCGTACGAG CTGGAGCAATATGGGCCAAT 20 20 50.0 50.0 58.0 58.0 21.7 11.9 0.006322 105845 107780 2149-2396 1.000000 85.3 psaC-ccsA_p3 psaC-ccsA 3 TTGTACCCAATGCGTACGAG GGATCCGTTATTTGGGGGTC 20 20 50.0 55.0 58.0 58.0 21.7 0.0 0.023896 105845 107780 1975-2222 1.000000 85.3 psaC-ccsA_p4 psaC-ccsA 4 ATTCGGGGTGATCTAGAGGG GGAGCAATATGGGCCAATGA 20 20 55.0 50.0 58.0 58.0 0.0 11.9 0.017257 105845 107780 2410-2654 0.916667 81.8 psaC-ccsA_p5 psaC-ccsA 5 ATTCGGGGTGATCTAGAGGG CTGGAGCAATATGGGCCAAT 20 20 55.0 50.0 58.0 58.0 0.0 11.9 0.022275 105845 107780 2412-2656 0.916667 81.8 trnV-GAC-rps12_p1 trnV-GAC-rps12 1 TGGAAGGGCTCACATTAGGT TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 58.3 57.7 0.0 16.5 0.588865 111698 113248 1506-1700 1.000000 80.5 trnV-GAC-rps12_p2 trnV-GAC-rps12 2 GTCAAGGTGACACTCTACCG TGGCAACTTTACGTAAGGCA 20 20 55.0 45.0 57.7 57.7 5.4 16.5 0.606988 111698 113248 1448-1642 1.000000 80.4 trnV-GAC-rps12_p3 trnV-GAC-rps12 3 GGCTCGAACTGATGACTTCC TGGCAACTTTACGTAAGGCA 20 20 55.0 45.0 58.4 57.7 0.0 16.5 0.611502 111698 113248 1473-1667 1.000000 80.3 trnV-GAC-rps12_p4 trnV-GAC-rps12 4 GTTTGATGGAAGGGCTCACA TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 58.1 57.7 0.0 16.5 0.347991 111698 113248 1512-1704 0.916667 78.9 trnV-GAC-rps12_p5 trnV-GAC-rps12 5 TGTTTGATGGAAGGGCTCAC TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 58.1 57.7 0.0 16.5 0.347991 111698 113248 1513-1705 0.916667 78.9 rps7-trnL-CAA_p1 rps7-trnL-CAA 1 CAGAGGGAATGGCAATGCTA GTCTCGCGTGTCTACCATTT 20 20 50.0 50.0 57.6 58.0 4.8 5.8 0.361187 114565 116151 1669-1704 1.000000 81.7 rps7-trnL-CAA_p2 rps7-trnL-CAA 2 CAGAGGGAATGGCAATGCTA CTCGCGTGTCTACCATTTCA 20 20 50.0 50.0 57.6 58.0 4.8 5.8 0.362557 114565 116151 1667-1702 1.000000 81.7 rps7-trnL-CAA_p3 rps7-trnL-CAA 3 TTAATGGATGCTGCCAGAGG GTCTCGCGTGTCTACCATTT 20 20 50.0 50.0 57.6 58.0 0.0 5.8 0.361187 114565 116151 1683-1718 1.000000 81.6 rps7-trnL-CAA_p4 rps7-trnL-CAA 4 TTAATGGATGCTGCCAGAGG CTCGCGTGTCTACCATTTCA 20 20 50.0 50.0 57.6 58.0 0.0 5.8 0.362557 114565 116151 1681-1716 1.000000 81.6 rps7-trnL-CAA_p5 rps7-trnL-CAA 5 CAGAGGGAATGGCAATGCTA GCGTGTCTACCATTTCACCA 20 20 50.0 50.0 57.6 58.2 4.8 0.0 0.550023 114565 116151 1664-1699 1.000000 80.2