primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG CAACCGTGCTAACCTTGGTA 20 20 55.0 50.0 58.1 57.8 0.0 0.0 0.301771 76 305 320-372 1.000000 89.6 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 CAATCCACTGCCTTGATCCA CAACCGTGCTAACCTTGGTA 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.306133 76 305 334-386 1.000000 89.6 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 AATCCACTGCCTTGATCCAC CAACCGTGCTAACCTTGGTA 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.307640 76 305 333-385 1.000000 89.5 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 ACAATCCACTGCCTTGATCC CAACCGTGCTAACCTTGGTA 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.307640 76 305 335-387 1.000000 89.5 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 GATCCACTTGGCTACATCCG ATCAACCGTGCTAACCTTGG 20 20 55.0 50.0 58.1 58.2 0.0 0.0 0.307703 76 305 322-374 1.000000 89.5 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AAAGCCGAGTACTCTACCGT AGGAACTTCCGCCTAATCAA 20 20 50.0 45.0 58.2 56.5 20.3 1.9 1.635593 4184 5097 970-1029 1.000000 78.6 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AAGCCGAGTACTCTACCGTT AGGAACTTCCGCCTAATCAA 20 20 50.0 45.0 58.2 56.5 20.3 1.9 1.635593 4184 5097 969-1028 1.000000 78.6 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 TCTAGCCGCACTTAAAAGCC AGGAACTTCCGCCTAATCAA 20 20 50.0 45.0 58.3 56.5 0.0 1.9 1.733010 4184 5097 984-1043 1.000000 77.7 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 CCGCACTTAAAAGCCGAGTA AGGAACTTCCGCCTAATCAA 20 20 50.0 45.0 58.3 56.5 5.3 1.9 1.749979 4184 5097 979-1038 1.000000 77.6 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 AAGCCGAGTACTCTACCGTT AGGAACTTCCGCCTAATCAAA 20 21 50.0 42.9 58.2 57.3 20.3 1.9 1.882245 4184 5097 969-1028 1.000000 76.7 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AACGGATCGTGTCCTTCAAG GAAATTGAAATGGGGCGTGG 20 20 50.0 50.0 57.9 58.0 7.8 0.0 0.089038 6238 7230 817-1150 1.000000 90.8 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 AACGGATCGTGTCCTTCAAG TGACTGGCATAACATCCACG 20 20 50.0 50.0 57.9 58.0 7.8 0.0 0.103051 6238 7230 1276-1603 1.000000 90.2 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AACGGATCGTGTCCTTCAAG AGCAGCTTGCCAAACAAAAG 20 20 50.0 45.0 57.9 58.1 7.8 0.0 0.136254 6238 7230 1320-1647 1.000000 89.8 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AACGGATCGTGTCCTTCAAG CTTACAGCAGCTTGCCAAAC 20 20 50.0 50.0 57.9 57.9 7.8 0.0 0.136380 6238 7230 1325-1652 1.000000 89.7 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AACGGATCGTGTCCTTCAAG CGTGTGAATCGAGGGTTCAT 20 20 50.0 50.0 57.9 58.0 7.8 3.4 0.090431 6238 7230 1442-1770 0.957447 88.0 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 CAATCCGACGCTTTAGTCCA ACGAATCACACTTTTACCACT 20 21 50.0 38.1 58.0 55.5 0.0 0.0 3.540425 8521 9077 622-637 1.000000 62.2 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 AATCCGACGCTTTAGTCCAC ACGAATCACACTTTTACCACT 20 21 50.0 38.1 58.0 55.5 0.0 0.0 3.541813 8521 9077 621-636 1.000000 62.2 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 CAATCCGACGCTTTAGTCCA AGAACGAATCACACTTTTACCAC 20 23 50.0 39.1 58.0 57.3 0.0 0.0 3.673141 8521 9077 625-640 1.000000 61.1 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 CAATCCGACGCTTTAGTCCA GAACGAATCACACTTTTACCACT 20 23 50.0 39.1 58.0 57.3 0.0 0.0 3.673141 8521 9077 624-639 1.000000 61.1 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 AATCCGACGCTTTAGTCCAC GAACGAATCACACTTTTACCACT 20 23 50.0 39.1 58.0 57.3 0.0 0.0 3.674529 8521 9077 623-638 1.000000 61.1 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 CATTGCCTCATTTGCATCCC CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 57.8 58.1 0.0 0.0 0.316428 26952 28047 1094-1209 1.000000 88.1 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 CATTGCCTCATTTGCATCCC TTTGGTAATGAGGCGACACC 20 20 50.0 50.0 57.8 58.2 0.0 0.0 0.418225 26952 28047 1113-1228 1.000000 87.3 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 CATTGCCTCATTTGCATCCC AAAAGGATTTGCAGTCCCCC 20 20 50.0 50.0 57.8 58.4 0.0 14.6 0.589791 26952 28047 1076-1191 1.000000 86.1 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 ATTGCCTCATTTGCATCCCC CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 58.9 58.1 0.0 0.0 0.956495 26952 28047 1093-1208 1.000000 83.0 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 ACATTGCCTCATTTGCATCC CCGGATTTGAACTGGGGAAA 20 20 45.0 50.0 57.0 58.1 0.0 0.0 1.055822 26952 28047 1095-1210 1.000000 82.2 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GTGGTAGAGTAACGCCATGG ACAAAAACGAAACGGTCCCT 20 20 55.0 45.0 58.1 58.2 7.6 0.0 0.310137 31530 32776 1342-1420 1.000000 87.4 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 TCAGTGGTAGAGTAACGCCA ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 58.1 58.2 0.0 0.0 0.332292 31530 32776 1345-1423 1.000000 87.2 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 ATAGTGACTCGTCCGGGAAT ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 57.9 58.2 0.0 0.0 0.314904 31530 32776 1388-1466 0.978723 86.6 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 GTGGTAGAGTAACGCCATGG CAAAAACGAAACGGTCCCTC 20 20 55.0 50.0 58.1 57.6 7.6 0.0 0.458613 31530 32776 1341-1419 0.957447 84.1 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 ATAGTGACTCGTCCGGGAAT CAAAAACGAAACGGTCCCTC 20 20 50.0 50.0 57.9 57.6 0.0 0.0 0.463380 31530 32776 1387-1465 0.936170 83.4 psaA-ycf3_p1 psaA-ycf3 1 TTTTACTTCTGGTTCCGGCG TTGAAGATCACGAGGCGTTT 20 20 50.0 45.0 58.5 57.8 0.0 0.0 0.648737 41635 42361 777-845 1.000000 83.0 psaA-ycf3_p2 psaA-ycf3 2 TTTTACTTCTGGTTCCGGCG TTGGTTGAAGATCACGAGGC 20 20 50.0 50.0 58.5 58.2 0.0 0.0 0.676508 41635 42361 781-849 1.000000 82.8 psaA-ycf3_p3 psaA-ycf3 3 TTTTACTTCTGGTTCCGGCG TGAAGATCACGAGGCGTTTC 20 20 50.0 50.0 58.5 58.3 0.0 0.0 0.774905 41635 42361 776-844 1.000000 82.0 psaA-ycf3_p4 psaA-ycf3 4 TTTTACTTCTGGTTCCGGCG TCACGAGGCGTTTCGAATAA 20 20 50.0 45.0 58.5 57.6 0.0 15.7 0.835818 41635 42361 770-838 1.000000 81.6 psaA-ycf3_p5 psaA-ycf3 5 TTTTACTTCTGGTTCCGGCG TGGTTTGATCAAGCTGCTGA 20 20 50.0 45.0 58.5 57.7 0.0 19.9 0.760053 41635 42361 855-923 1.000000 81.4 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 CGTTAGTCCTGGTAAAGCCC GGATCAGGATCGCCCATTTT 20 20 55.0 50.0 58.0 58.0 0.0 3.4 0.033065 46071 46733 1273-1361 1.000000 90.1 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 TAGTCCTGGTAAAGCCCCAA GGATCAGGATCGCCCATTTT 20 20 50.0 50.0 58.0 58.0 0.0 3.4 0.060887 46071 46733 1270-1358 1.000000 89.9 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 TTAGTCCTGGTAAAGCCCCA GGATCAGGATCGCCCATTTT 20 20 50.0 50.0 58.0 58.0 0.0 3.4 0.060887 46071 46733 1271-1359 1.000000 89.9 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 CGTTAGTCCTGGTAAAGCCC ACGCAGTCAACTCCATTTGT 20 20 55.0 45.0 58.0 58.0 0.0 0.0 0.052629 46071 46733 1370-1458 1.000000 89.7 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 CGTTAGTCCTGGTAAAGCCC GGATTCCTCTACCAACGCAG 20 20 55.0 55.0 58.0 58.1 0.0 0.0 0.078623 46071 46733 1384-1472 0.978723 88.6 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 GGGGCTAAAATCCCGGAAAT AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 57.9 57.8 0.7 0.0 0.279423 50014 50967 1075-1106 1.000000 84.5 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TTCTCCGGCCCTTTCCTAAT AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 58.4 57.8 0.0 0.0 0.605515 50014 50967 1096-1127 1.000000 81.9 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 GGGGCTAAAATCCCGGAAAT GAAGGTCTACGGTTCGAGTC 20 20 50.0 55.0 57.9 57.5 0.7 0.0 0.623195 50014 50967 1074-1105 1.000000 81.8 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 GGGGCTAAAATCCCGGAAAT GTTCGAGTCCGTATAGCCCT 20 20 50.0 55.0 57.9 58.7 0.7 0.0 0.765489 50014 50967 1063-1094 1.000000 80.7 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 CCCTTTCCTAATCGGGGCTA AGAAGGTCTACGGTTCGAGT 20 20 55.0 50.0 58.6 57.8 0.0 0.0 0.766291 50014 50967 1088-1119 1.000000 80.6 ycf4-cemA_p1 ycf4-cemA 1 CTTGCGCGTACCAATTGAAG GAAATCCACCAGGGCAGAAA 20 20 50.0 50.0 58.1 58.1 8.4 0.0 0.194446 60191 60749 443-667 1.000000 89.8 ycf4-cemA_p2 ycf4-cemA 2 CGTTGACCCGTACTGATGAG GAAATCCACCAGGGCAGAAA 20 20 55.0 50.0 58.1 58.1 0.0 0.0 0.167269 60191 60749 513-737 1.000000 89.5 ycf4-cemA_p3 ycf4-cemA 3 GAACAAAAAGCCGCGGAATT GAAATCCACCAGGGCAGAAA 20 20 45.0 50.0 58.2 58.1 33.5 0.0 0.298310 60191 60749 472-696 1.000000 88.6 ycf4-cemA_p4 ycf4-cemA 4 TTTCTTGCGCGTACCAATTG GAAATCCACCAGGGCAGAAA 20 20 45.0 50.0 57.7 58.1 8.4 0.0 0.400584 60191 60749 446-670 1.000000 88.1 ycf4-cemA_p5 ycf4-cemA 5 CGTTGACCCGTACTGATGAG TCCACCAGGGCAGAAATACT 20 20 55.0 50.0 58.1 58.3 0.0 0.0 0.421798 60191 60749 509-733 1.000000 87.5 petA-psbJ_p1 petA-psbJ 1 GAGAAGGTTCAATTGGCCGA TCCGGATTAGGTTCATCCCT 20 20 50.0 50.0 58.2 57.5 5.4 0.0 0.668311 62619 63647 1048-1141 1.000000 86.2 petA-psbJ_p2 petA-psbJ 2 TCGAGAAGGTTCAATTGGCC TCCGGATTAGGTTCATCCCT 20 20 50.0 50.0 58.2 57.5 5.4 0.0 0.668311 62619 63647 1050-1143 1.000000 86.2 petA-psbJ_p3 petA-psbJ 3 GAGAAGGTTCAATTGGCCGA CCGGATTAGGTTCATCCCTG 20 20 50.0 55.0 58.2 57.4 5.4 0.0 0.729614 62619 63647 1047-1140 1.000000 85.7 petA-psbJ_p4 petA-psbJ 4 TCGAGAAGGTTCAATTGGCC CCGGATTAGGTTCATCCCTG 20 20 50.0 55.0 58.2 57.4 5.4 0.0 0.729614 62619 63647 1049-1142 1.000000 85.7 petA-psbJ_p5 petA-psbJ 5 AGAAGGTTCAATTGGCCGAA TCCGGATTAGGTTCATCCCT 20 20 45.0 50.0 57.7 57.5 5.4 0.0 0.775892 62619 63647 1047-1140 1.000000 85.4 ndhF_p1 ndhF 1 ACAGGAACAAGAGGGATCCA AAAGAGGTAAGGTCGGGTGA 20 20 50.0 50.0 58.0 58.0 15.2 0.0 0.064600 108752 110974 2519-2524 0.936170 83.2 ndhF_p2 ndhF 2 ACAGGAACAAGAGGGATCCA AAGAGGTAAGGTCGGGTGAA 20 20 50.0 50.0 58.0 58.0 15.2 0.0 0.064600 108752 110974 2518-2523 0.936170 83.2 ndhF_p3 ndhF 3 AAGAGGGATCCACCGAAGAA AAAGAGGTAAGGTCGGGTGA 20 20 50.0 50.0 58.0 58.0 15.2 0.0 0.067186 108752 110974 2511-2516 0.936170 83.2 ndhF_p4 ndhF 4 AAGAGGGATCCACCGAAGAA AAGAGGTAAGGTCGGGTGAA 20 20 50.0 50.0 58.0 58.0 15.2 0.0 0.067186 108752 110974 2510-2515 0.936170 83.2 ndhF_p5 ndhF 5 GGGAGAAAGGGTGGAAAGTG AAGAGGTAAGGTCGGGTGAA 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.108750 108752 110974 2590-2595 0.936170 82.7 ndhF-rpl32_p1 ndhF-rpl32 1 CACGCATATTGATATATCTGTTCCA TGATGCAGAAGTACGTTTTT 25 20 36.0 35.0 57.2 53.5 13.8 0.0 10.368618 110975 111479 479-580 0.978723 51.1 ndhF-rpl32_p2 ndhF-rpl32 2 CACGCATATTGATATATCTGTTCCA TTGATGCAGAAGTACGTTTT 25 20 36.0 35.0 57.2 53.5 13.8 0.0 10.368618 110975 111479 480-581 0.978723 51.1 ndhF-rpl32_p3 ndhF-rpl32 3 CACGCATATTGATATATCTGTTCCA TTTGATGCAGAAGTACGTTT 25 20 36.0 35.0 57.2 53.5 13.8 0.0 10.368618 110975 111479 481-582 0.978723 51.1 ndhF-rpl32_p4 ndhF-rpl32 4 CACGCATATTGATATATCTGTTCCA TTTTGATGCAGAAGTACGTT 25 20 36.0 35.0 57.2 53.5 13.8 0.0 10.368618 110975 111479 482-583 0.978723 51.1 ndhF-rpl32_p5 ndhF-rpl32 5 CACGCATATTGATATATCTGTTCCA TTTTTGATGCAGAAGTACGT 25 20 36.0 35.0 57.2 53.5 13.8 0.0 10.368618 110975 111479 483-584 0.978723 51.1 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 TGTGCGACAAACAAATAAACT AGCGTGTCTACCGATTTCAC 21 20 33.3 50.0 54.9 58.0 0.0 0.0 4.096584 111657 112182 484-610 1.000000 59.2 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 TGTGCGACAAACAAATAAACT CAGCGTGTCTACCGATTTCA 21 20 33.3 50.0 54.9 58.0 0.0 0.0 4.097955 111657 112182 485-611 1.000000 59.2 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 TGTGCGACAAACAAATAAACT TCCTAAGAGCAGCGTGTCTA 21 20 33.3 50.0 54.9 57.9 0.0 0.0 4.213031 111657 112182 494-620 1.000000 58.3 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 TGTGCGACAAACAAATAAACT CCTAAGAGCAGCGTGTCTAC 21 20 33.3 55.0 54.9 57.8 0.0 0.0 4.285049 111657 112182 493-619 1.000000 57.7 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 TGTGCGACAAACAAATAAACT CTAAGAGCAGCGTGTCTACC 21 20 33.3 55.0 54.9 57.8 0.0 0.0 4.285049 111657 112182 492-618 1.000000 57.7 ccsA_p1 ccsA 1 GTGAAATCGGTAGACACGCT TCAGTAGCTTTTCGATGGCC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.032006 112347 113318 1677-1686 1.000000 86.2 ccsA_p2 ccsA 2 TGAAATCGGTAGACACGCTG TCAGTAGCTTTTCGATGGCC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.033376 112347 113318 1676-1685 1.000000 86.2 ccsA_p3 ccsA 3 GTGAAATCGGTAGACACGCT CAGTAGCTTTTCGATGGCCT 20 20 50.0 50.0 58.0 58.0 0.0 3.3 0.037669 112347 113318 1676-1685 1.000000 86.2 ccsA_p4 ccsA 4 TGAAATCGGTAGACACGCTG CAGTAGCTTTTCGATGGCCT 20 20 50.0 50.0 58.0 58.0 0.0 3.3 0.039039 112347 113318 1675-1684 1.000000 86.2 ccsA_p5 ccsA 5 GTGAAATCGGTAGACACGCT TGACGAAATGGGCGGAATAG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.059726 112347 113318 1727-1736 1.000000 85.9 rps15_p1 rps15 1 GATCAGCCGAAGAACACCAT TACCAAGAGCAAGGACATGC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.143699 121079 121414 1193-1236 0.957447 85.7 rps15_p2 rps15 2 AACACCATGCATTGATGGGT TACCAAGAGCAAGGACATGC 20 20 45.0 50.0 58.1 57.9 8.9 0.0 0.172483 121079 121414 1181-1224 0.936170 84.4 rps15_p3 rps15 3 CTTCTCCGCCAATAATGCCT TACCAAGAGCAAGGACATGC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.140988 121079 121414 1743-1786 0.957447 84.3 rps15_p4 rps15 4 TCTTCTCCGCCAATAATGCC TACCAAGAGCAAGGACATGC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.146542 121079 121414 1744-1787 0.957447 84.3 rps15_p5 rps15 5 CTCAAACGGTTTCACGCTTC TACCAAGAGCAAGGACATGC 20 20 50.0 50.0 58.0 57.9 2.5 0.0 0.132577 121079 121414 1034-1048 0.382979 59.3 ycf1_p1 ycf1 1 TCGCAATTGAAAAAGCAAATAACG AAGCATCGAAATCAAGAAGA 24 20 33.3 35.0 58.1 52.9 10.3 0.0 9.186715 122407 122526 186-186 0.978723 48.4 ycf1_p2 ycf1 2 TCGCAATTGAAAAAGCAAATAACG AGCATCGAAATCAAGAAGAA 24 20 33.3 35.0 58.1 52.9 10.3 0.0 9.186715 122407 122526 185-185 0.957447 47.2 ycf1_p3 ycf1 3 CGCAATTGAAAAAGCAAATAACG AGCATCGAAATCAAGAAGAA 23 20 34.8 35.0 56.8 52.9 10.3 0.0 9.266622 122407 122526 184-184 0.957447 47.2 ycf1_p4 ycf1 4 TCGCAATTGAAAAAGCAAATAACG AGCATCAAATAAAAAGCATCGA 24 22 33.3 31.8 58.1 55.1 10.3 0.0 9.036394 122407 122526 199-199 0.957447 46.3 ycf1_p5 ycf1 5 CGCAATTGAAAAAGCAAATAACG AGCATCAAATAAAAAGCATCGA 23 22 34.8 31.8 56.8 55.1 10.3 0.0 9.116301 122407 122526 198-198 0.957447 46.3