primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AAAGCCGAGTACTCTACCGT TTTCCTTGAAAGGGGTGCTC 20 20 50.0 50.0 58.2 58.0 20.3 9.2 0.173044 29781 30560 902-921 1.000000 78.9 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AAGCCGAGTACTCTACCGTT TTTCCTTGAAAGGGGTGCTC 20 20 50.0 50.0 58.2 58.0 20.3 9.2 0.173044 29781 30560 901-920 1.000000 78.9 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 TCTAGCCGCACTTAAAAGCC TTTCCTTGAAAGGGGTGCTC 20 20 50.0 50.0 58.3 58.0 0.0 9.2 0.270461 29781 30560 916-935 1.000000 78.1 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 CCGCACTTAAAAGCCGAGTA TTTCCTTGAAAGGGGTGCTC 20 20 50.0 50.0 58.3 58.0 5.3 9.2 0.287430 29781 30560 911-930 1.000000 78.0 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 TACCGTTGAGTTAGCAACCC TTTCCTTGAAAGGGGTGCTC 20 20 50.0 50.0 57.5 58.0 0.0 9.2 0.465381 29781 30560 888-907 1.000000 76.5 rps16_p1 rps16 1 ATATACAAGTCGCTACCCCC TATGGACAGCTGAACCAGTG 20 20 50.0 50.0 56.2 57.2 0.0 29.2 2.577330 30561 31680 1249-1249 1.000000 59.6 rps16_p2 rps16 2 ATATACAAGTCGCTACCCCC ATGGACAGCTGAACCAGTGA 20 20 50.0 50.0 56.2 58.9 0.0 29.2 2.749979 30561 31680 1248-1248 1.000000 58.2 rps16_p3 rps16 3 ATATACAAGTCGCTACCCCC GTCTATGGACAGCTGAACCA 20 20 50.0 50.0 56.2 56.9 0.0 28.4 2.868365 30561 31680 1252-1252 1.000000 57.2 rps16_p4 rps16 4 ATATACAAGTCGCTACCCCC TGTCTATGGACAGCTGAACC 20 20 50.0 50.0 56.2 56.9 0.0 23.3 2.868365 30561 31680 1253-1253 1.000000 57.2 rps16_p5 rps16 5 ATATACAAGTCGCTACCCCC CTATGGACAGCTGAACCAGT 20 20 50.0 50.0 56.2 56.9 0.0 29.2 2.876787 30561 31680 1250-1250 1.000000 57.2 trnS-GCU-trnS-CGA_p1 trnS-GCU-trnS-CGA 1 CAATCCGACGCTTTAGTCCA ACCACTAAACTATACCCGCT 20 20 50.0 45.0 58.0 55.6 0.0 0.0 2.358738 33964 34530 622-622 1.000000 61.4 trnS-GCU-trnS-CGA_p2 trnS-GCU-trnS-CGA 2 AATCCGACGCTTTAGTCCAC ACCACTAAACTATACCCGCT 20 20 50.0 45.0 58.0 55.6 0.0 0.0 2.360126 33964 34530 621-621 1.000000 61.4 trnS-GCU-trnS-CGA_p3 trnS-GCU-trnS-CGA 3 ACGGAAAGAGAGGGATTCGA ACCACTAAACTATACCCGCT 20 20 50.0 45.0 58.2 55.6 0.0 0.0 2.505503 33964 34530 676-676 1.000000 60.2 trnS-GCU-trnS-CGA_p4 trnS-GCU-trnS-CGA 4 AGCAATCCGACGCTTTAGTC ACCACTAAACTATACCCGCT 20 20 50.0 45.0 58.4 55.6 0.0 0.0 2.712578 33964 34530 624-624 1.000000 58.6 trnS-GCU-trnS-CGA_p5 trnS-GCU-trnS-CGA 5 CAATCCGACGCTTTAGTCCA CGAACGAATCACACTTTTACCA 20 22 50.0 40.9 58.0 57.3 0.0 0.0 2.723441 33964 34530 640-640 1.000000 58.5 atpH-atpI_p1 atpH-atpI 1 ATAACGGAAGCGGCAGAAAT CCCGTCATGTTCCTTGGATT 20 20 45.0 50.0 58.0 57.9 1.4 0.0 0.167157 39053 40038 1104-1120 1.000000 80.0 atpH-atpI_p2 atpH-atpI 2 AGCCAATCCAGCAGCAATAA CCCGTCATGTTCCTTGGATT 20 20 45.0 50.0 57.9 57.9 0.0 0.0 0.277216 39053 40038 1120-1136 1.000000 79.1 atpH-atpI_p3 atpH-atpI 3 AATAACGGAAGCGGCAGAAA CCCGTCATGTTCCTTGGATT 20 20 45.0 50.0 58.2 57.9 1.4 0.0 0.312696 39053 40038 1105-1121 1.000000 78.8 atpH-atpI_p4 atpH-atpI 4 GCCAATCCAGCAGCAATAAC CCCGTCATGTTCCTTGGATT 20 20 50.0 50.0 57.8 57.9 0.0 0.0 0.343157 39053 40038 1119-1135 1.000000 78.5 atpH-atpI_p5 atpH-atpI 5 TCCAGCAGCAATAACGGAAG CCCGTCATGTTCCTTGGATT 20 20 50.0 50.0 58.3 57.9 0.0 0.0 0.390932 39053 40038 1114-1130 1.000000 78.2 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 CATTGCCTCATTTGCATCCC CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 57.8 58.1 0.0 0.0 0.316428 52363 53501 1228-1228 1.000000 77.6 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 GTTCTTCTGTCAAACCCCGA CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 57.8 58.1 0.0 0.0 0.331972 52363 53501 1304-1304 1.000000 77.5 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 AGTTCTTCTGTCAAACCCCG CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 57.7 58.1 0.0 0.0 0.338245 52363 53501 1305-1305 1.000000 77.4 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 CATTGCCTCATTTGCATCCC TTTGGTAATCAGGCGACACC 20 20 50.0 50.0 57.8 58.2 0.0 0.0 0.418225 52363 53501 1247-1247 1.000000 76.8 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 GTTCTTCTGTCAAACCCCGA TTTGGTAATCAGGCGACACC 20 20 50.0 50.0 57.8 58.2 0.0 0.0 0.433769 52363 53501 1323-1323 1.000000 76.7 petN-psbM_p1 petN-psbM 1 ACTCGTAGTGTGGGGAAGAA TCCTACCGCCTTTCTGCTTA 20 20 50.0 50.0 58.0 58.4 0.0 0.0 0.441446 54500 55296 883-883 1.000000 76.8 petN-psbM_p2 petN-psbM 2 TCGTAGTGTGGGGAAGAAGT TCCTACCGCCTTTCTGCTTA 20 20 50.0 50.0 58.0 58.4 0.0 0.0 0.441446 54500 55296 881-881 1.000000 76.8 petN-psbM_p3 petN-psbM 3 CGTAGTGTGGGGAAGAAGTG TCCTACCGCCTTTCTGCTTA 20 20 55.0 50.0 57.9 58.4 0.0 0.0 0.516362 54500 55296 880-880 1.000000 76.2 petN-psbM_p4 petN-psbM 4 ACTCGTAGTGTGGGGAAGAA CCTACCGCCTTTCTGCTTAT 20 20 50.0 50.0 58.0 57.4 0.0 0.0 0.627434 54500 55296 882-882 1.000000 75.3 petN-psbM_p5 petN-psbM 5 TCGTAGTGTGGGGAAGAAGT CCTACCGCCTTTCTGCTTAT 20 20 50.0 50.0 58.0 57.4 0.0 0.0 0.627434 54500 55296 880-880 1.000000 75.3 psbM-trnD-GUC_p1 psbM-trnD-GUC 1 TAAGCAGAAAGGCGGTAGGA TGCGAGATCCCCTATTTCCT 20 20 50.0 50.0 58.4 57.9 0.0 0.0 0.539229 55402 55930 701-701 1.000000 76.0 psbM-trnD-GUC_p2 psbM-trnD-GUC 2 TAAGCAGAAAGGCGGTAGGA ATTTCCTTTCCCCGGGATTG 20 20 50.0 50.0 58.4 57.8 0.0 26.3 0.595255 55402 55930 688-688 1.000000 75.6 psbM-trnD-GUC_p3 psbM-trnD-GUC 3 ATAAGCAGAAAGGCGGTAGG TGCGAGATCCCCTATTTCCT 20 20 50.0 50.0 57.4 57.9 0.0 0.0 0.725217 55402 55930 702-702 1.000000 74.5 psbM-trnD-GUC_p4 psbM-trnD-GUC 4 TAAGCAGAAAGGCGGTAGGA TTCCTTTCCCCGGGATTGTA 20 20 50.0 50.0 58.4 58.3 0.0 26.3 0.764783 55402 55930 686-686 1.000000 74.2 psbM-trnD-GUC_p5 psbM-trnD-GUC 5 TAAGCAGAAAGGCGGTAGGA TCCCCGGGATTGTAGTTCAA 20 20 50.0 50.0 58.4 58.3 0.0 26.3 0.777054 55402 55930 680-680 1.000000 74.1 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GTGGTAGAGTAACGCCATGG GGACCAGCCTACAAAAACGA 20 20 55.0 50.0 58.1 58.1 7.6 0.0 0.177181 56995 58183 1349-1350 1.000000 78.8 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 AGTGACTCGTCCTGGAATGA GGACCAGCCTACAAAAACGA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.188382 56995 58183 1393-1394 1.000000 78.7 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 TCAGTGGTAGAGTAACGCCA GGACCAGCCTACAAAAACGA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.199336 56995 58183 1352-1353 1.000000 78.6 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 GTGGTAGAGTAACGCCATGG ACAAAAACGAAACGGTCCCT 20 20 55.0 45.0 58.1 58.2 7.6 0.0 0.310137 56995 58183 1339-1340 1.000000 77.7 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 AGTGACTCGTCCTGGAATGA ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 58.1 58.2 0.0 0.0 0.321338 56995 58183 1383-1384 1.000000 77.6 psbE-petL_p1 psbE-petL 1 CAACCCGCAATGAATAGGGA GTCGTATCTTGCTCAGACCA 20 20 50.0 50.0 57.9 57.1 6.4 0.0 0.992787 89821 90744 1116-1116 1.000000 72.2 psbE-petL_p2 psbE-petL 2 ACTGACGAATAACCAACCCG GTCGTATCTTGCTCAGACCA 20 20 50.0 50.0 57.9 57.1 0.0 0.0 1.030402 89821 90744 1129-1129 1.000000 71.9 psbE-petL_p3 psbE-petL 3 AGAACGTTCTCCTGTGCTTC GTCGTATCTTGCTCAGACCA 20 20 50.0 50.0 57.8 57.1 24.9 0.0 1.097796 89821 90744 1039-1039 1.000000 71.4 psbE-petL_p4 psbE-petL 4 ACGAATAACCAACCCGCAAT GTCGTATCTTGCTCAGACCA 20 20 45.0 50.0 58.2 57.1 0.0 0.0 1.112474 89821 90744 1125-1125 1.000000 71.2 psbE-petL_p5 psbE-petL 5 CGAATAACCAACCCGCAATG GTCGTATCTTGCTCAGACCA 20 20 50.0 50.0 57.8 57.1 0.0 0.0 1.128804 89821 90744 1124-1124 1.000000 71.1 psbH_p1 psbH 1 TTTCAAGACCCCAACGGATC AGCCAGGACTTTGTGATTCG 20 20 50.0 50.0 57.8 58.2 0.0 0.0 0.380688 99156 99377 339-339 1.000000 77.4 psbH_p2 psbH 2 TCAAGACCCCAACGGATCTA AGCCAGGACTTTGTGATTCG 20 20 50.0 50.0 57.8 58.2 0.0 0.0 0.427767 99156 99377 337-337 1.000000 77.1 psbH_p3 psbH 3 AGACCCCAACGGATCTATCA AGCCAGGACTTTGTGATTCG 20 20 50.0 50.0 57.5 58.2 0.0 0.0 0.658302 99156 99377 334-334 1.000000 75.2 psbH_p4 psbH 4 TTTCAAGACCCCAACGGATC GCCAGGACTTTGTGATTCGT 20 20 50.0 50.0 57.8 58.5 0.0 0.0 0.670444 99156 99377 338-338 1.000000 75.1 psbH_p5 psbH 5 TCAAGACCCCAACGGATCTA GCCAGGACTTTGTGATTCGT 20 20 50.0 50.0 57.8 58.5 0.0 0.0 0.717523 99156 99377 336-336 1.000000 74.7 rpl16_p1 rpl16 1 ATTAATTTTCGAGCCCCGCT TTCCCCTACAAACCATTCGC 20 20 45.0 50.0 57.9 58.2 0.0 0.0 0.223803 105704 107007 1757-1757 1.000000 78.4 rpl16_p2 rpl16 2 ACCGCTGTCACGTTTAAGTT TTCCCCTACAAACCATTCGC 20 20 45.0 50.0 58.1 58.2 0.0 0.0 0.226989 105704 107007 1920-1920 1.000000 78.4 rpl16_p3 rpl16 3 ATTAATTTTCGAGCCCCGCT AATCGAAAGTAGACCGCGAG 20 20 45.0 50.0 57.9 57.8 0.0 8.2 0.243107 105704 107007 2056-2056 1.000000 78.2 rpl16_p4 rpl16 4 ATTAATTTTCGAGCCCCGCT GGAATTGCCCGCATAGAGAT 20 20 45.0 50.0 57.9 57.8 0.0 0.0 0.243910 105704 107007 2133-2133 1.000000 78.2 rpl16_p5 rpl16 5 ACCGCTGTCACGTTTAAGTT AATCGAAAGTAGACCGCGAG 20 20 45.0 50.0 58.1 57.8 0.0 8.2 0.246293 105704 107007 2219-2219 1.000000 78.2 rps3_p1 rps3 1 CCCCTTTTTGTTCTATCGACG ACCCTAGATGGCAAAAGACA 21 20 47.6 45.0 57.0 56.4 0.0 0.0 3.582041 107163 107825 762-762 1.000000 51.6 rps3_p2 rps3 2 CCCTTTTTGTTCTATCGACGG ACCCTAGATGGCAAAAGACA 21 20 47.6 45.0 57.0 56.4 0.0 0.0 3.582041 107163 107825 761-761 1.000000 51.6 rps3_p3 rps3 3 TGAGTTTCCCCCTTTTTGTTCT ACCCTAGATGGCAAAAGACA 22 20 40.9 45.0 58.0 56.4 0.0 0.0 3.582252 107163 107825 770-770 1.000000 51.5 rps3_p4 rps3 4 CGGAATTTAGTTGATTGGCCAG ACCCTAGATGGCAAAAGACA 22 20 45.5 45.0 58.0 56.4 5.1 0.0 3.604011 107163 107825 804-804 1.000000 51.4 rps3_p5 rps3 5 TCCCCCTTTTTGTTCTATCGAC ACCCTAGATGGCAAAAGACA 22 20 45.5 45.0 58.1 56.4 0.0 0.0 3.624702 107163 107825 764-764 1.000000 51.2 rpl22_p1 rpl22 1 CAAGTCGGAAACCAAGTGGA TGAATTTCCAAGGACACGCA 20 20 50.0 45.0 58.0 58.0 3.8 0.0 0.063941 107810 108274 592-592 1.000000 79.6 rpl22_p2 rpl22 2 GATGGCTTTGGGTTGTACCA TGAATTTCCAAGGACACGCA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.107863 107810 108274 610-610 1.000000 79.3 rpl22_p3 rpl22 3 TGATGGCTTTGGGTTGTACC TGAATTTCCAAGGACACGCA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.107863 107810 108274 611-611 1.000000 79.3 rpl22_p4 rpl22 4 AAGGGAATGATGGCTTTGGG TGAATTTCCAAGGACACGCA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.155671 107810 108274 618-618 1.000000 78.9 rpl22_p5 rpl22 5 GGGTTGTACCAAGTCGGAAA TGAATTTCCAAGGACACGCA 20 20 50.0 45.0 57.7 58.0 0.0 0.0 0.285001 107810 108274 601-601 1.000000 77.9 ndhF_p1 ndhF 1 AGACCCGTTTCTGAAGAGTC AGGTCGGGTGAATTGGAAAC 20 20 50.0 50.0 56.9 58.1 0.0 0.0 1.205697 134182 136404 2354-2355 1.000000 70.8 ndhF_p2 ndhF 2 GACCCGTTTCTGAAGAGTCT AGGTCGGGTGAATTGGAAAC 20 20 50.0 50.0 56.9 58.1 0.0 0.0 1.205697 134182 136404 2353-2354 1.000000 70.8 ndhF_p3 ndhF 3 AGACCCGTTTCTGAAGAGTC GAAGGTCGGGTGAATTGGAA 20 20 50.0 50.0 56.9 57.8 0.0 0.0 1.305536 134182 136404 2356-2357 1.000000 70.0 ndhF_p4 ndhF 4 GACCCGTTTCTGAAGAGTCT GAAGGTCGGGTGAATTGGAA 20 20 50.0 50.0 56.9 57.8 0.0 0.0 1.305536 134182 136404 2355-2356 1.000000 70.0 ndhF_p5 ndhF 5 GACCCGTTTCTGAAGAGTCTT AGGTCGGGTGAATTGGAAAC 21 20 47.6 50.0 57.6 58.1 4.7 0.0 1.482708 134182 136404 2353-2354 1.000000 68.5 ccsA_p1 ccsA 1 GGCGGCATAGCATCTCTTAA TATGATTCGACAGGCTCTCG 20 20 50.0 50.0 57.8 56.9 3.1 5.8 1.237220 137741 138712 1170-1171 1.000000 70.3 ccsA_p2 ccsA 2 GGCGGCATAGCATCTCTTAA ATATGATTCGACAGGCTCTCG 20 21 50.0 47.6 57.8 57.4 3.1 5.8 1.737409 137741 138712 1171-1172 1.000000 66.3 ccsA_p3 ccsA 3 TGGCGGCATAGCATCTCTTA TATGATTCGACAGGCTCTCG 20 20 50.0 50.0 59.0 56.9 8.0 5.8 2.019587 137741 138712 1171-1172 1.000000 64.0 ccsA_p4 ccsA 4 GGCGGCATAGCATCTCTTAA ATGATTCGACAGGCTCTCG 20 19 50.0 52.6 57.8 57.0 3.1 5.8 2.125123 137741 138712 1169-1170 1.000000 63.2 ccsA_p5 ccsA 5 GGCGGCATAGCATCTCTTAA GATTCGACAGGCTCTCGC 20 18 50.0 61.1 57.8 58.0 3.1 7.3 2.174864 137741 138712 1167-1168 1.000000 62.8 psaC_p1 psaC 1 GCAAGGAAAATGGTTCGTGG AGACCGAAAATTGATGGCGT 20 20 50.0 45.0 57.9 58.2 0.0 0.0 0.243357 140515 140760 417-422 1.000000 79.6 psaC_p2 psaC 2 TTTGCCCACTGTACATTGCT AGACCGAAAATTGATGGCGT 20 20 45.0 45.0 58.0 58.2 7.7 0.0 0.184828 140515 140760 775-780 1.000000 79.4 psaC_p3 psaC 3 TTTGCCCACTGTACATTGCT TGAAGCAGCTATTGGATCGG 20 20 45.0 50.0 58.0 57.8 7.7 0.0 0.251203 140515 140760 1108-1113 1.000000 78.7 psaC_p4 psaC 4 GAGAATCTCGAGTAACCGGC AGACCGAAAATTGATGGCGT 20 20 55.0 45.0 57.9 58.2 13.1 0.0 0.301346 140515 140760 733-738 1.000000 78.6 psaC_p5 psaC 5 GCAAGGAAAATGGTTCGTGG TGAAGCAGCTATTGGATCGG 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.309733 140515 140760 750-755 1.000000 78.5 ndhA_p1 ndhA 1 AGCATAGGGAACATATCGGA ACTTGCAAATTCTTCCGCAG 20 20 45.0 45.0 55.5 57.3 0.0 0.0 3.228936 143076 145235 2362-2363 1.000000 54.3 ndhA_p2 ndhA 2 AGCATAGGGAACATATCGGA CTTGCAAATTCTTCCGCAGT 20 20 45.0 45.0 55.5 57.3 0.0 0.0 3.228936 143076 145235 2361-2362 1.000000 54.3 ndhA_p3 ndhA 3 AGCATAGGGAACATATCGGAA ACTTGCAAATTCTTCCGCAG 21 20 42.9 45.0 56.3 57.3 0.0 0.0 3.420868 143076 145235 2362-2363 1.000000 52.8 ndhA_p4 ndhA 4 AGCATAGGGAACATATCGGAA CTTGCAAATTCTTCCGCAGT 21 20 42.9 45.0 56.3 57.3 0.0 0.0 3.420868 143076 145235 2361-2362 1.000000 52.8 ndhA_p5 ndhA 5 AGCATAGGGAACATATCGGA TCAACTTGCAAATTCTTCCGC 20 21 45.0 42.9 55.5 58.0 0.0 0.0 3.528829 143076 145235 2365-2366 1.000000 51.9 ycf1_p1 ycf1 1 AGATTCGTAGATCCCGATTCT ACGGACTCGATTGTGGAATG 21 20 42.9 50.0 55.8 58.0 17.4 0.0 3.242639 151021 151140 312-312 1.000000 54.6 ycf1_p2 ycf1 2 AGATTCGTAGATCCCGATTCT CACGGACTCGATTGTGGAAT 21 20 42.9 50.0 55.8 58.0 17.4 0.0 3.242639 151021 151140 313-313 1.000000 54.6 ycf1_p3 ycf1 3 AGATTCGTAGATCCCGATTCT CTCGAAACACGGACTCGATT 21 20 42.9 50.0 55.8 58.0 17.4 2.4 3.253952 151021 151140 320-320 1.000000 54.5 ycf1_p4 ycf1 4 AGATTCGTAGATCCCGATTCTT ACGGACTCGATTGTGGAATG 22 20 40.9 50.0 56.5 58.0 17.4 0.0 3.490243 151021 151140 312-312 1.000000 52.6 ycf1_p5 ycf1 5 AGATTCGTAGATCCCGATTCTT CACGGACTCGATTGTGGAAT 22 20 40.9 50.0 56.5 58.0 17.4 0.0 3.490243 151021 151140 313-313 1.000000 52.6