primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps16-trnQ(UUG)_p1 rps16-trnQ(UUG) 1 CGGATCTGTCCTTCAAGTCG GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.1 58.1 0.0 16.9 0.161467 6441 8101 1743-1748 1.000000 79.4 rps16-trnQ(UUG)_p2 rps16-trnQ(UUG) 2 ATCTGTCCTTCAAGTCGCAC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.9 58.1 0.0 16.9 0.162155 6441 8101 1740-1745 1.000000 79.4 rps16-trnQ(UUG)_p3 rps16-trnQ(UUG) 3 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6441 8101 1729-1734 1.000000 79.0 rps16-trnQ(UUG)_p4 rps16-trnQ(UUG) 4 CCACAACGGATCTGTCCTTC GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.3 58.1 7.9 16.9 0.349248 6441 8101 1749-1754 1.000000 77.9 rps16-trnQ(UUG)_p5 rps16-trnQ(UUG) 5 GGATCTGTCCTTCAAGTCGC GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.4 58.1 0.0 16.9 0.429912 6441 8101 1742-1747 1.000000 77.3 trnS(GCU)-trnG(GCC)_p1 trnS(GCU)-trnG(GCC) 1 CAATCCGACGCTTTAGTCCA AGACCGAAAGACCCTTTAACT 20 21 50.0 42.9 58.0 56.6 0.0 0.0 2.425660 9417 10109 799-800 1.000000 61.6 trnS(GCU)-trnG(GCC)_p2 trnS(GCU)-trnG(GCC) 2 AATCCGACGCTTTAGTCCAC AGACCGAAAGACCCTTTAACT 20 21 50.0 42.9 58.0 56.6 0.0 0.0 2.427048 9417 10109 798-799 1.000000 61.6 trnS(GCU)-trnG(GCC)_p3 trnS(GCU)-trnG(GCC) 3 ATCAACGGAACCGGAAAGAG AGACCGAAAGACCCTTTAACT 20 21 50.0 42.9 57.9 56.6 9.5 0.0 2.515840 9417 10109 863-864 1.000000 60.8 trnS(GCU)-trnG(GCC)_p4 trnS(GCU)-trnG(GCC) 4 CATCAACGGAACCGGAAAGA AGACCGAAAGACCCTTTAACT 20 21 50.0 42.9 58.2 56.6 9.5 0.0 2.617743 9417 10109 864-865 1.000000 60.0 trnS(GCU)-trnG(GCC)_p5 trnS(GCU)-trnG(GCC) 5 TCATCAACGGAACCGGAAAG AGACCGAAAGACCCTTTAACT 20 21 50.0 42.9 58.2 56.6 9.5 0.0 2.617743 9417 10109 865-866 1.000000 60.0 trnG(GCC)-trnR(UCU)_p1 trnG(GCC)-trnR(UCU) 1 AGCCTTCCAAGCTAACGATG AGAAGACCTCTGTCCTATCCA 20 21 50.0 47.6 58.0 56.9 0.0 0.0 2.081443 10858 11021 247-247 1.000000 64.3 trnG(GCC)-trnR(UCU)_p2 trnG(GCC)-trnR(UCU) 2 CCTAGCCTTCCAAGCTAACG AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 58.1 56.9 0.0 0.0 2.110280 10858 11021 250-250 1.000000 64.1 trnG(GCC)-trnR(UCU)_p3 trnG(GCC)-trnR(UCU) 3 AGCCTTCCAAGCTAACGATG AGGTTTAGAAGACCTCTGTCCT 20 22 50.0 45.5 58.0 57.9 0.0 0.0 2.164771 10858 11021 253-253 1.000000 63.6 trnG(GCC)-trnR(UCU)_p4 trnG(GCC)-trnR(UCU) 4 AGCCTTCCAAGCTAACGATG CATTAGACAATGGACGCTGT 20 20 50.0 45.0 58.0 55.9 0.0 0.0 2.177871 10858 11021 228-228 1.000000 63.6 trnG(GCC)-trnR(UCU)_p5 trnG(GCC)-trnR(UCU) 5 CCTAGCCTTCCAAGCTAACG AGGTTTAGAAGACCTCTGTCCT 20 22 55.0 45.5 58.1 57.9 0.0 0.0 2.193608 10858 11021 256-256 1.000000 63.4 atpH-atpI_p1 atpH-atpI 1 AACAGAAGCGGCAGAAATCA TCCCTGTCATGTTCCTTGGA 20 20 45.0 50.0 58.1 58.3 1.4 0.0 0.362752 14655 15723 1203-1203 1.000000 77.3 atpH-atpI_p2 atpH-atpI 2 TACCCTCTACAGCTTGACCC TCCCTGTCATGTTCCTTGGA 20 20 55.0 50.0 58.1 58.3 0.0 0.0 0.396990 14655 15723 1288-1288 1.000000 77.0 atpH-atpI_p3 atpH-atpI 3 GCGATACCCTCTACAGCTTG TCCCTGTCATGTTCCTTGGA 20 20 55.0 50.0 57.9 58.3 0.0 0.0 0.400507 14655 15723 1292-1292 1.000000 77.0 atpH-atpI_p4 atpH-atpI 4 CAGCAGCAATAACAGAAGCG TCCCTGTCATGTTCCTTGGA 20 20 50.0 50.0 57.8 58.3 0.0 0.0 0.428635 14655 15723 1213-1213 1.000000 76.8 atpH-atpI_p5 atpH-atpI 5 GCCAATCCAGCAGCAATAAC TCCCTGTCATGTTCCTTGGA 20 20 50.0 50.0 57.8 58.3 0.0 0.0 0.473359 14655 15723 1220-1220 1.000000 76.4 rps2-rpoC2_p1 rps2-rpoC2 1 AACTCCTGCCTCCATCATCT TTCGAGGGGGAAATGAGAGA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.357147 17400 17606 377-382 1.000000 78.2 rps2-rpoC2_p2 rps2-rpoC2 2 TGCCTCCATCATCTCTTCCA TTCGAGGGGGAAATGAGAGA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.364021 17400 17606 371-376 1.000000 78.2 rps2-rpoC2_p3 rps2-rpoC2 3 TCCTGCCTCCATCATCTCTT TTCGAGGGGGAAATGAGAGA 20 20 50.0 50.0 57.8 57.8 0.0 0.0 0.434938 17400 17606 374-379 1.000000 77.6 rps2-rpoC2_p4 rps2-rpoC2 4 GAACTCCTGCCTCCATCATC TTCGAGGGGGAAATGAGAGA 20 20 55.0 50.0 57.7 57.8 0.0 0.0 0.500676 17400 17606 378-383 1.000000 77.0 rps2-rpoC2_p5 rps2-rpoC2 5 CTCCTGCCTCCATCATCTCT TTCGAGGGGGAAATGAGAGA 20 20 55.0 50.0 58.3 57.8 0.0 0.0 0.528170 17400 17606 375-380 1.000000 76.8 rpoB-trnC(GCA)_p1 rpoB-trnC(GCA) 1 CTCATTTCCATCCCCGAGC CCGGATTTGAACTGGGGAAA 19 20 57.9 50.0 58.0 58.1 0.0 0.0 1.094688 27988 29168 1246-1264 1.000000 72.6 rpoB-trnC(GCA)_p2 rpoB-trnC(GCA) 2 ATTCCCTCATTTCCATCCCC CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 56.9 58.1 0.0 0.0 1.163184 27988 29168 1251-1269 1.000000 72.1 rpoB-trnC(GCA)_p3 rpoB-trnC(GCA) 3 CTCATTTCCATCCCCGAGC AAAGGATTTGCAGTCCTCCG 19 20 57.9 50.0 58.0 58.2 0.0 19.5 1.186175 27988 29168 1227-1245 1.000000 71.9 rpoB-trnC(GCA)_p4 rpoB-trnC(GCA) 4 TCATTTCCATCCCCGAGCAT CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 59.2 58.1 0.0 0.0 1.236113 27988 29168 1245-1263 1.000000 71.5 rpoB-trnC(GCA)_p5 rpoB-trnC(GCA) 5 ATTCCCTCATTTCCATCCCC AAAGGATTTGCAGTCCTCCG 20 20 50.0 50.0 56.9 58.2 0.0 19.5 1.254671 27988 29168 1232-1250 1.000000 71.4 trnM(CAU)-psbD_p1 trnM(CAU)-psbD 1 GTGGTAGAGTAACGCCATGG GGACCAGCCTACAAAAACGA 20 20 55.0 50.0 58.1 58.1 7.6 0.0 0.177181 33272 34589 1475-1480 1.000000 79.1 trnM(CAU)-psbD_p2 trnM(CAU)-psbD 2 TCAGTGGTAGAGTAACGCCA GGACCAGCCTACAAAAACGA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.199336 33272 34589 1478-1483 1.000000 78.9 trnM(CAU)-psbD_p3 trnM(CAU)-psbD 3 GTGGTAGAGTAACGCCATGG ACAAAAACGAAACGGTCCCT 20 20 55.0 45.0 58.1 58.2 7.6 0.0 0.310137 33272 34589 1465-1470 1.000000 78.0 trnM(CAU)-psbD_p4 trnM(CAU)-psbD 4 TCAGTGGTAGAGTAACGCCA ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 58.1 58.2 0.0 0.0 0.332292 33272 34589 1468-1473 1.000000 77.8 trnM(CAU)-psbD_p5 trnM(CAU)-psbD 5 GGCGTAAGTCATCGGTTCAA GGACCAGCCTACAAAAACGA 20 20 50.0 50.0 58.3 58.1 0.0 0.0 0.395920 33272 34589 1452-1457 1.000000 77.3 psbZ-trnG(GCC)_p1 psbZ-trnG(GCC) 1 TTGCTTCTCCTGATGGTTGG AATCGAACCCGCATCTTCTC 20 20 50.0 50.0 57.8 58.1 0.0 0.0 0.263697 37879 38170 459-460 1.000000 79.1 psbZ-trnG(GCC)_p2 psbZ-trnG(GCC) 2 TTGCTTCTCCTGATGGTTGG GAATCGAACCCGCATCTTCT 20 20 50.0 50.0 57.8 58.1 0.0 0.0 0.263697 37879 38170 460-461 1.000000 79.1 psbZ-trnG(GCC)_p3 psbZ-trnG(GCC) 3 GCTTCTCCTGATGGTTGGTC AATCGAACCCGCATCTTCTC 20 20 55.0 50.0 58.3 58.1 0.0 0.0 0.314679 37879 38170 457-458 1.000000 78.7 psbZ-trnG(GCC)_p4 psbZ-trnG(GCC) 4 GCTTCTCCTGATGGTTGGTC GAATCGAACCCGCATCTTCT 20 20 55.0 50.0 58.3 58.1 0.0 0.0 0.314679 37879 38170 458-459 1.000000 78.7 psbZ-trnG(GCC)_p5 psbZ-trnG(GCC) 5 GGGTTAGTCTTTCTGGTGGG AATCGAACCCGCATCTTCTC 20 20 55.0 50.0 57.5 58.1 0.0 0.0 0.550350 37879 38170 394-395 1.000000 77.0 psaA-ycf3_p1 psaA-ycf3 1 GCCCATTCCTCGAAAGAAGT GGAAACAGGCTATAGCGCTT 20 20 50.0 50.0 57.9 58.0 4.1 18.7 0.160416 43542 44285 902-905 1.000000 79.2 psaA-ycf3_p2 psaA-ycf3 2 GCCCATTCCTCGAAAGAAGT ATTGGTTGAAGATCACGGGG 20 20 50.0 50.0 57.9 57.9 4.1 0.0 0.244113 43542 44285 854-857 1.000000 78.6 psaA-ycf3_p3 psaA-ycf3 3 GCCCATTCCTCGAAAGAAGT TGGTTTGATCAAGCAGCTGA 20 20 50.0 45.0 57.9 57.7 4.1 20.4 0.390477 43542 44285 927-930 1.000000 77.4 psaA-ycf3_p4 psaA-ycf3 4 GCCCATTCCTCGAAAGAAGT AGGCTATAGCGCTTACTCCT 20 20 50.0 50.0 57.9 57.7 4.1 18.7 0.411415 43542 44285 896-899 1.000000 77.2 psaA-ycf3_p5 psaA-ycf3 5 GCCCATTCCTCGAAAGAAGT TTGGAAACAGGCTATAGCGC 20 20 50.0 50.0 57.9 58.3 4.1 18.3 0.451648 43542 44285 904-907 1.000000 76.9 atpB-rbcL_p1 atpB-rbcL 1 ATACGGCCCAGGTTTTGTTT AACACCCGCTTTGAATCCAA 20 20 45.0 45.0 58.0 58.3 0.0 0.0 0.305431 56402 57207 911-925 1.000000 79.1 atpB-rbcL_p2 atpB-rbcL 2 GGAAACCCCAGAACCAGAAG AACACCCGCTTTGAATCCAA 20 20 55.0 45.0 58.1 58.3 0.0 0.0 0.390437 56402 57207 882-896 1.000000 78.5 atpB-rbcL_p3 atpB-rbcL 3 GGCGGAAAGGCTACATCTAG AACACCCGCTTTGAATCCAA 20 20 55.0 45.0 57.8 58.3 0.0 0.0 0.457837 56402 57207 953-967 1.000000 77.8 atpB-rbcL_p4 atpB-rbcL 4 TACGGCCCAGGTTTTGTTTT AACACCCGCTTTGAATCCAA 20 20 45.0 45.0 58.2 58.3 0.0 0.0 0.523554 56402 57207 910-924 1.000000 77.4 atpB-rbcL_p5 atpB-rbcL 5 GGACCGATGATTTGGACGAT AACACCCGCTTTGAATCCAA 20 20 50.0 45.0 57.8 58.3 0.0 0.0 0.541987 56402 57207 929-943 1.000000 77.2 rbcL_p1 rbcL 1 AACGCCTAATTCGTGTCGAG AAGATTGGGCCGAGTTTTCA 20 20 50.0 45.0 58.4 57.7 0.0 0.0 0.660749 57208 58635 1556-1556 1.000000 75.2 rbcL_p2 rbcL 2 AACGCCTAATTCGTGTCGAG AGATTGGGCCGAGTTTTCAA 20 20 50.0 45.0 58.4 57.7 0.0 0.0 0.660749 57208 58635 1555-1555 1.000000 75.2 rbcL_p3 rbcL 3 CGCCTAATTCGTGTCGAGTA AAGATTGGGCCGAGTTTTCA 20 20 50.0 45.0 57.5 57.7 0.0 0.0 0.749917 57208 58635 1554-1554 1.000000 74.5 rbcL_p4 rbcL 4 CGCCTAATTCGTGTCGAGTA AGATTGGGCCGAGTTTTCAA 20 20 50.0 45.0 57.5 57.7 0.0 0.0 0.749917 57208 58635 1553-1553 1.000000 74.5 rbcL_p5 rbcL 5 TAACGCCTAATTCGTGTCGA AGATTGGGCCGAGTTTTCAA 20 20 45.0 45.0 57.1 57.7 0.0 0.0 1.204065 57208 58635 1556-1556 1.000000 70.9 rbcL-accD_p1 rbcL-accD 1 GAGGCTAGCAAATGGAGTCC ACCTGCGTTCTAACTCCTTC 20 20 55.0 50.0 58.0 57.3 18.2 0.0 0.785098 58636 59298 838-838 1.000000 74.1 rbcL-accD_p2 rbcL-accD 2 ATTTGAGTTTGCCGCAATGG ACCTGCGTTCTAACTCCTTC 20 20 45.0 50.0 57.9 57.3 6.6 0.0 0.828681 58636 59298 779-779 1.000000 73.8 rbcL-accD_p3 rbcL-accD 3 GCTGCTTGTGAGGTATGGAA ACCTGCGTTCTAACTCCTTC 20 20 50.0 50.0 57.9 57.3 0.0 0.0 0.859375 58636 59298 808-808 1.000000 73.5 rbcL-accD_p4 rbcL-accD 4 TGAGTTTGCCGCAATGGATA ACCTGCGTTCTAACTCCTTC 20 20 45.0 50.0 57.9 57.3 6.6 0.0 0.866806 58636 59298 776-776 1.000000 73.5 rbcL-accD_p5 rbcL-accD 5 AGTTTGCCGCAATGGATACT ACCTGCGTTCTAACTCCTTC 20 20 45.0 50.0 57.9 57.3 6.6 0.0 0.874285 58636 59298 774-774 1.000000 73.4 ycf4-cemA_p1 ycf4-cemA 1 CATTCCCTTGACCCGTACTG GAGAAATCCACCAGGGCAAA 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.100820 62599 63468 1045-1049 1.000000 79.8 ycf4-cemA_p2 ycf4-cemA 2 ATTCCCTTGACCCGTACTGA GAGAAATCCACCAGGGCAAA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.129660 62599 63468 1044-1048 1.000000 79.6 ycf4-cemA_p3 ycf4-cemA 3 TTCCCTTGACCCGTACTGAT GAGAAATCCACCAGGGCAAA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.129660 62599 63468 1043-1047 1.000000 79.6 ycf4-cemA_p4 ycf4-cemA 4 CTTGCGCGTACCAATTGAAG GAGAAATCCACCAGGGCAAA 20 20 50.0 50.0 58.1 58.1 8.4 0.0 0.194446 62599 63468 970-974 1.000000 79.1 ycf4-cemA_p5 ycf4-cemA 5 GAACAAAAAGCCGCCGAATT GAGAAATCCACCAGGGCAAA 20 20 45.0 50.0 58.2 58.1 0.0 0.0 0.298310 62599 63468 999-1003 1.000000 78.3 psbE-petL_p1 psbE-petL 1 CAACCCGCAATGAATAGGGA GTCGTATCTTGCTCAGACCA 20 20 50.0 50.0 57.9 57.1 6.4 0.0 0.992787 67069 68248 1372-1372 1.000000 72.7 psbE-petL_p2 psbE-petL 2 ACTGACGAATAACCAACCCG GTCGTATCTTGCTCAGACCA 20 20 50.0 50.0 57.9 57.1 0.0 0.0 1.030402 67069 68248 1385-1385 1.000000 72.4 psbE-petL_p3 psbE-petL 3 AGAACGTTCTCCTGTGCTTC GTCGTATCTTGCTCAGACCA 20 20 50.0 50.0 57.8 57.1 24.9 0.0 1.097796 67069 68248 1295-1295 1.000000 71.9 psbE-petL_p4 psbE-petL 4 ACGAATAACCAACCCGCAAT GTCGTATCTTGCTCAGACCA 20 20 45.0 50.0 58.2 57.1 0.0 0.0 1.112474 67069 68248 1381-1381 1.000000 71.7 psbE-petL_p5 psbE-petL 5 CGAATAACCAACCCGCAATG GTCGTATCTTGCTCAGACCA 20 20 50.0 50.0 57.8 57.1 0.0 0.0 1.128804 67069 68248 1380-1380 1.000000 71.6 rps12-trnV(GAC)_p1 rps12-trnV(GAC) 1 TGGCAACTTTACGTAAGGCA GATGACTTCCACCACGTCAA 20 20 45.0 50.0 57.7 57.8 16.5 0.0 0.421509 100533 102128 1684-1692 1.000000 77.1 rps12-trnV(GAC)_p2 rps12-trnV(GAC) 2 TGGCAACTTTACGTAAGGCA AACTGATGACTTCCACCACG 20 20 45.0 50.0 57.7 57.8 16.5 0.0 0.427523 100533 102128 1688-1696 1.000000 77.1 rps12-trnV(GAC)_p3 rps12-trnV(GAC) 3 TGGCAACTTTACGTAAGGCA ATGACTTCCACCACGTCAAG 20 20 45.0 50.0 57.7 57.8 16.5 0.0 0.427523 100533 102128 1683-1691 1.000000 77.1 rps12-trnV(GAC)_p4 rps12-trnV(GAC) 4 TGGCAACTTTACGTAAGGCA CTGATGACTTCCACCACGTC 20 20 45.0 55.0 57.7 58.3 16.5 0.0 0.542896 100533 102128 1686-1694 1.000000 76.2 rps12-trnV(GAC)_p5 rps12-trnV(GAC) 5 TGGCAACTTTACGTAAGGCA GTCAAGGTGACACTCTACCG 20 20 45.0 55.0 57.7 57.7 16.5 5.4 0.606988 100533 102128 1669-1677 1.000000 75.7 ndhF-rpl32_p1 ndhF-rpl32 1 GTTGCCGTCGGAAAAAGAAG ATGCTTTTAACGCTGTCCCA 20 20 50.0 45.0 58.0 58.1 17.5 0.0 0.128127 114294 114767 666-668 1.000000 79.9 ndhF-rpl32_p2 ndhF-rpl32 2 GTTGCCGTCGGAAAAAGAAG TGCTTTTAACGCTGTCCCAT 20 20 50.0 45.0 58.0 58.1 17.5 0.0 0.128127 114294 114767 665-667 1.000000 79.9 ndhF-rpl32_p3 ndhF-rpl32 3 TGCCGTCGGAAAAAGAAGAA ATGCTTTTAACGCTGTCCCA 20 20 45.0 45.0 58.0 58.1 17.5 0.0 0.139416 114294 114767 664-666 1.000000 79.8 ndhF-rpl32_p4 ndhF-rpl32 4 TGCCGTCGGAAAAAGAAGAA TGCTTTTAACGCTGTCCCAT 20 20 45.0 45.0 58.0 58.1 17.5 0.0 0.139416 114294 114767 663-665 1.000000 79.8 ndhF-rpl32_p5 ndhF-rpl32 5 TTGCCGTCGGAAAAAGAAGA TGCTTTTAACGCTGTCCCAT 20 20 45.0 45.0 58.0 58.1 17.5 0.0 0.139416 114294 114767 664-666 1.000000 79.8 ycf1_p1 ycf1 1 TGAGTTATTAACATGGAACCCCT GAGGGGGTCAGCATTCAAAA 23 20 39.1 50.0 57.2 58.1 9.2 0.0 3.866218 128202 128321 186-186 1.000000 51.2 ycf1_p2 ycf1 2 TGAGTTATTAACATGGAACCCCT AGAAATTGGGTAGGGAGGGG 23 20 39.1 55.0 57.2 58.4 9.2 0.0 4.181149 128202 128321 200-200 1.000000 48.6 ycf1_p3 ycf1 3 TGAGTTATTAACATGGAACCCCTT GAGGGGGTCAGCATTCAAAA 24 20 37.5 50.0 57.9 58.1 9.2 0.0 4.224081 128202 128321 186-186 1.000000 48.4 ycf1_p4 ycf1 4 TTGAGTTATTAACATGGAACCCCT GAGGGGGTCAGCATTCAAAA 24 20 37.5 50.0 57.9 58.1 9.2 0.0 4.224081 128202 128321 187-187 1.000000 48.3 ycf1_p5 ycf1 5 TGAGTTATTAACATGGAACCCC GAGGGGGTCAGCATTCAAAA 22 20 40.9 50.0 55.8 58.1 9.2 0.0 4.306388 128202 128321 186-186 1.000000 47.7