feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GUG tRNA trnH-GUG trnH-GUG 8 81 -1 74 LSC NA 0 74 76 300 no 1.000000 2 1.000000 NA 0.000000 30.700000 IGS_001 igs trnH-GUG|psbA trnH-GUG-psbA 82 458 0 377 LSC NA 0 377 150 300 no 1.000000 2 1.000000 NA 0.000000 37.900000 psbA gene psbA psbA 459 1520 -1 1062 LSC NA 0 1062 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 IGS_002 igs psbA|trnK-UUU psbA-trnK-UUU 1521 1744 0 224 LSC NA 0 224 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1745 1779 -1 35 LSC NA 0 35 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 matK gene matK matK 2056 3585 -1 1530 LSC NA 0 1530 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 IGS_005 igs matK|trnK-UUU matK-trnK-UUU 3586 4279 0 694 LSC NA 0 694 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4280 4316 -1 37 LSC NA 0 37 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_006 igs trnK-UUU|rps16 trnK-UUU-rps16 4317 5030 0 714 LSC NA 0 714 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 rps16 gene rps16 rps16 5031 6142 -1 1112 LSC NA 0 1112 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 IGS_007 igs rps16|trnQ-UUG rps16-trnQ-UUG 6143 6700 0 558 LSC NA 0 558 300 300 no 1.000000 2 1.000000 NA 0.000000 45.400000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 6701 6772 -1 72 LSC NA 0 72 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_008 igs trnQ-UUG|psbK trnQ-UUG-psbK 6773 7120 0 348 LSC NA 0 348 300 300 no 1.000000 2 1.000000 NA 0.000000 41.000000 psbK gene psbK psbK 7121 7300 1 180 LSC NA 0 180 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_009 igs psbK|psbI psbK-psbI 7301 7723 0 423 LSC NA 0 423 300 300 no 1.000000 2 1.000000 NA 0.000000 42.600000 psbI gene psbI psbI 7724 7834 1 111 LSC NA 0 111 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_010 igs psbI|trnS-GCU psbI-trnS-GCU 7835 8031 0 197 LSC NA 0 197 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnS-GCU tRNA trnS-GCU trnS-GCU 8032 8119 -1 88 LSC NA 0 88 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_011 igs trnS-GCU|trnG-UCC trnS-GCU-trnG-UCC 8120 9842 0 1723 LSC NA 0 1723 300 300 no 1.000000 2 1.000000 NA 0.000000 45.800000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 9843 9865 1 23 LSC NA 0 23 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 10561 10608 1 48 LSC NA 0 48 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_014 igs trnG-UCC|trnR-UCU trnG-UCC-trnR-UCU 10609 10745 0 137 LSC NA 0 137 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnR-UCU tRNA trnR-UCU trnR-UCU 10746 10817 1 72 LSC NA 0 72 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_015 igs trnR-UCU|ATPA trnR-UCU-ATPA 10818 10920 0 103 LSC NA 0 103 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 ATPA gene ATPA ATPA 10921 12444 -1 1524 LSC NA 0 1524 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 IGS_016 igs ATPA|ATPF ATPA-ATPF 12445 12513 0 69 LSC NA 0 69 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 ATPF gene ATPF ATPF 12514 13847 -1 1334 LSC NA 0 1334 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 IGS_017 igs ATPF|ATPH ATPF-ATPH 13848 14272 0 425 LSC NA 0 425 300 300 no 1.000000 2 1.000000 NA 0.000000 42.600000 ATPH gene ATPH ATPH 14273 14518 -1 246 LSC NA 0 246 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_018 igs ATPH|ATPI ATPH-ATPI 14519 15090 0 572 LSC NA 0 572 300 300 no 1.000000 2 1.000000 NA 0.000000 45.700000 ATPI gene ATPI ATPI 15091 15834 -1 744 LSC NA 0 744 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 IGS_019 igs ATPI|rps2 ATPI-rps2 15835 15966 0 132 LSC NA 0 132 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 rps2 gene rps2 rps2 15967 16752 -1 786 LSC NA 0 786 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 IGS_020 igs rps2|rpoC2 rps2-rpoC2 16753 16985 0 233 LSC NA 0 233 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 rpoC2 gene rpoC2 rpoC2 16986 21089 -1 4104 LSC NA 0 4104 300 300 no 1.000000 2 1.000000 NA 0.000000 41.400000 IGS_021 igs rpoC2|rpoC1 rpoC2-rpoC1 21090 21273 0 184 LSC NA 0 184 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 rpoC1 gene rpoC1 rpoC1 21274 24111 -1 2838 LSC NA 0 2838 300 300 no 1.000000 2 1.000000 NA 0.000000 43.500000 IGS_022 igs rpoC1|rpoB rpoC1-rpoB 24112 24137 0 26 LSC NA 0 26 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 rpoB gene rpoB rpoB 24138 27344 -1 3207 LSC NA 0 3207 300 300 no 1.000000 2 1.000000 NA 0.000000 42.800000 IGS_023 igs rpoB|trnC-GCA rpoB-trnC-GCA 27345 28457 0 1113 LSC NA 0 1113 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 trnC-GCA tRNA trnC-GCA trnC-GCA 28458 28528 1 71 LSC NA 0 71 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_024 igs trnC-GCA|petN trnC-GCA-petN 28529 28963 0 435 LSC NA 0 435 300 300 no 1.000000 2 1.000000 NA 0.000000 42.800000 petN gene petN petN 28964 29053 1 90 LSC NA 0 90 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_025 igs petN|psbM petN-psbM 29054 30197 0 1144 LSC NA 0 1144 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 psbM gene psbM psbM 30198 30302 -1 105 LSC NA 0 105 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_026 igs psbM|trnD-GUC psbM-trnD-GUC 30303 31561 0 1259 LSC NA 0 1259 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 trnD-GUC tRNA trnD-GUC trnD-GUC 31562 31635 -1 74 LSC NA 0 74 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_027 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 31636 32007 0 372 LSC NA 0 372 300 300 no 1.000000 2 1.000000 NA 0.000000 41.500000 trnY-GUA tRNA trnY-GUA trnY-GUA 32008 32091 -1 84 LSC NA 0 84 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_028 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 32092 32155 0 64 LSC NA 0 64 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnE-UUC tRNA trnE-UUC trnE-UUC 32156 32228 -1 73 LSC NA 0 73 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_029 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 32229 33064 0 836 LSC NA 0 836 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 trnT-GGU tRNA trnT-GGU trnT-GGU 33065 33136 1 72 LSC NA 0 72 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_030 igs trnT-GGU|psbD trnT-GGU-psbD 33137 34398 0 1262 LSC NA 0 1262 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 psbD gene psbD psbD 34399 35460 1 1062 LSC NA 0 1062 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 psbC gene psbC psbC 35408 36829 1 1422 LSC NA 0 1422 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 IGS_032 igs psbC|trnS-UGA psbC-trnS-UGA 36830 37083 0 254 LSC NA 0 254 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnS-UGA tRNA trnS-UGA trnS-UGA 37084 37175 -1 92 LSC NA 0 92 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_033 igs trnS-UGA|psbZ trnS-UGA-psbZ 37176 37537 0 362 LSC NA 0 362 300 300 no 1.000000 2 1.000000 NA 0.000000 41.300000 psbZ gene psbZ psbZ 37538 37726 1 189 LSC NA 0 189 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_034 igs psbZ|trnG-GCC psbZ-trnG-GCC 37727 38091 0 365 LSC NA 0 365 300 300 no 1.000000 2 1.000000 NA 0.000000 41.400000 trnG-GCC tRNA trnG-GCC trnG-GCC 38092 38162 1 71 LSC NA 0 71 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_035 igs trnG-GCC|trnfM-CAU trnG-GCC-trnfM-CAU 38163 38369 0 207 LSC NA 0 207 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 38370 38441 -1 72 LSC NA 0 72 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_036 igs trnfM-CAU|rps14 trnfM-CAU-rps14 38442 38593 0 152 LSC NA 0 152 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 rps14 gene rps14 rps14 38594 38896 -1 303 LSC NA 0 303 300 300 no 1.000000 2 1.000000 NA 0.000000 40.100000 IGS_037 igs rps14|psaB rps14-psaB 38897 39017 0 121 LSC NA 0 121 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 psaB gene psaB psaB 39018 41222 -1 2205 LSC NA 0 2205 300 79 no 1.000000 2 1.000000 NA 0.000000 35.700000 IGS_038 igs psaB|psaA psaB-psaA 41223 41247 0 25 LSC NA 0 25 300 54 no 1.000000 2 1.000000 NA 0.000000 29.000000 psaA gene psaA psaA 41248 43500 -1 2253 LSC 0.002663 6 0 300 58 no 1.000000 2 1.000000 NA 1.000000 48.100000 IGS_039 igs psaA|ycf3 psaA-ycf3 43501 44265 0 765 LSC 0.010884 8 30 300 96 no 1.000000 2 1.000000 NA 0.960784 61.000000 ycf3 gene ycf3 ycf3 44266 46354 -1 2089 LSC 0.005283 11 7 151 40 no 1.000000 2 1.000000 NA 0.996649 48.900000 IGS_040 igs ycf3|trnS-GGA ycf3-trnS-GGA 46355 47161 0 807 LSC 0.007472 6 4 193 93 no 1.000000 2 1.000000 NA 0.995043 55.500000 trnS-GGA tRNA trnS-GGA trnS-GGA 47162 47248 1 87 LSC 0.000000 0 0 14 6 no 0.000000 1 0.000000 NA 1.000000 19.200000 IGS_041 igs trnS-GGA|rps4 trnS-GGA-rps4 47249 47602 0 354 LSC 0.022599 8 0 101 192 no 1.000000 2 1.000000 NA 1.000000 59.200000 rps4 gene rps4 rps4 47603 48208 -1 606 LSC 0.009901 6 0 186 179 no 1.000000 2 1.000000 NA 1.000000 62.900000 IGS_042 igs rps4|trnT-UGU rps4-trnT-UGU 48209 48617 0 409 LSC 0.013550 5 40 68 191 no 1.000000 2 1.000000 NA 0.902200 56.000000 trnT-UGU tRNA trnT-UGU trnT-UGU 48618 48690 -1 73 LSC 0.000000 0 0 19 118 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_043 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 48691 49559 0 869 LSC 0.012746 11 6 92 300 no 1.000000 2 1.000000 NA 0.993096 58.600000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 49560 49596 1 37 LSC 0.000000 0 0 2 271 no 0.000000 1 0.000000 NA 1.000000 18.900000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 50230 50279 1 50 LSC 0.000000 0 0 144 156 no 0.000000 1 0.000000 NA 1.000000 29.500000 IGS_046 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 50280 50666 0 387 LSC 0.002584 1 0 194 81 no 1.000000 2 1.000000 NA 1.000000 46.900000 trnF-GAA tRNA trnF-GAA trnF-GAA 50667 50739 1 73 LSC 0.000000 0 0 230 8 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_047 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 50740 51414 0 675 LSC 0.011958 8 6 300 115 no 1.000000 2 1.000000 NA 0.991111 60.100000 ndhJ gene ndhJ ndhJ 51415 51891 -1 477 LSC 0.004193 2 0 1 223 no 1.000000 2 1.000000 NA 1.000000 43.700000 IGS_048 igs ndhJ|ndhK ndhJ-ndhK 51892 52039 0 148 LSC 0.000000 0 5 202 75 no 1.000000 2 1.000000 NA 0.966216 46.400000 ndhK gene ndhK ndhK 52040 52717 -1 678 LSC 0.004425 3 0 300 90 no 1.000000 2 1.000000 NA 1.000000 53.000000 IGS_049 igs ndhK|ndhC ndhK-ndhC 52718 52776 0 59 LSC 0.000000 0 0 300 31 no 0.000000 1 0.000000 NA 1.000000 21.100000 ndhC gene ndhC ndhC 52777 53139 -1 363 LSC 0.002755 1 0 300 233 no 1.000000 2 1.000000 NA 1.000000 55.400000 IGS_050 igs ndhC|rbcL ndhC-rbcL 53140 53939 0 800 LSC 0.005038 4 6 300 189 no 1.000000 2 1.000000 NA 0.992500 61.500000 rbcL gene rbcL rbcL 53940 55382 -1 1443 LSC 0.004158 6 0 157 66 no 1.000000 2 1.000000 NA 1.000000 51.100000 IGS_051 igs rbcL|ATPB rbcL-ATPB 55383 56195 0 813 LSC 0.007380 6 0 81 26 no 1.000000 2 1.000000 NA 1.000000 49.900000 ATPB gene ATPB ATPB 56196 57692 1 1497 LSC 0.004008 6 0 42 300 no 1.000000 2 1.000000 NA 1.000000 49.200000 ATPE gene ATPE ATPE 57689 58090 1 402 LSC 0.000000 0 0 143 62 no 0.000000 1 0.000000 NA 1.000000 25.500000 IGS_053 igs ATPE|trnM-CAU ATPE-trnM-CAU 58091 58387 0 297 LSC 0.065744 19 8 300 154 yes 1.000000 2 1.000000 NA 0.973064 82.200000 trnM-CAU tRNA trnM-CAU trnM-CAU 58388 58459 -1 72 LSC 0.000000 0 0 32 82 no 0.000000 1 0.000000 NA 1.000000 21.100000 IGS_054 igs trnM-CAU|trnV-UAC trnM-CAU-trnV-UAC 58460 58626 0 167 LSC 0.005988 1 0 104 63 no 1.000000 2 1.000000 NA 1.000000 45.700000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 58627 58664 1 38 LSC 0.000000 0 0 84 25 no 0.000000 1 0.000000 NA 1.000000 20.600000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 59251 59285 1 35 LSC 0.000000 0 0 300 16 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_057 igs trnV-UAC|accD trnV-UAC-accD 59286 60682 0 1397 LSC 0.330205 387 225 300 5 yes 1.000000 2 1.000000 NA 0.838941 80.800000 accD gene accD accD 60683 62212 1 1530 LSC 0.227957 318 135 0 5 yes 1.000000 2 1.000000 NA 0.911765 82.500000 IGS_058 igs accD|psaI accD-psaI 62213 62838 0 626 LSC 0.048872 13 360 4 191 no 1.000000 2 1.000000 NA 0.424920 61.400000 psaI gene psaI psaI 62839 62949 1 111 LSC 0.000000 0 0 300 80 no 0.000000 1 0.000000 NA 1.000000 24.800000 IGS_059 igs psaI|ycf4 psaI-ycf4 62950 63254 0 305 LSC 0.009836 3 0 300 148 no 1.000000 2 1.000000 NA 1.000000 54.400000 ycf4 gene ycf4 ycf4 63255 63809 1 555 LSC 0.010811 6 0 108 135 no 1.000000 2 1.000000 NA 1.000000 57.100000 IGS_060 igs ycf4|cemA ycf4-cemA 63810 64741 0 932 LSC 0.014100 13 10 48 294 no 1.000000 2 1.000000 NA 0.989270 56.500000 cemA gene cemA cemA 64742 65431 1 690 LSC 0.004348 3 0 43 39 no 1.000000 2 1.000000 NA 1.000000 49.200000 IGS_061 igs cemA|petA cemA-petA 65432 65692 0 261 LSC 0.015326 4 0 183 55 no 1.000000 2 1.000000 NA 1.000000 50.400000 petA gene petA petA 65693 66655 1 963 LSC 0.006231 6 0 18 6 no 1.000000 2 1.000000 NA 1.000000 47.800000 IGS_062 igs petA|psbJ petA-psbJ 66656 67678 0 1023 LSC 0.011893 12 14 35 300 no 1.000000 2 1.000000 NA 0.986315 54.500000 psbJ gene psbJ psbJ 67679 67801 -1 123 LSC 0.000000 0 0 125 300 no 0.000000 1 0.000000 NA 1.000000 28.100000 IGS_063 igs psbJ|psbL psbJ-psbL 67802 67944 0 143 LSC 0.000000 0 0 248 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbL gene psbL psbL 67945 68061 -1 117 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_064 igs psbL|psbF psbL-psbF 68062 68088 0 27 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbF gene psbF psbF 68089 68208 -1 120 LSC 0.000000 0 0 300 292 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_065 igs psbF|psbE psbF-psbE 68209 68216 0 8 LSC 0.000000 0 0 300 284 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbE gene psbE psbE 68217 68468 -1 252 LSC 0.000000 0 0 300 32 no 0.000000 1 0.000000 NA 1.000000 21.100000 IGS_066 igs psbE|petL psbE-petL 68469 69798 0 1330 LSC 0.009023 12 0 300 300 no 1.000000 2 1.000000 NA 1.000000 63.900000 petL gene petL petL 69799 69894 1 96 LSC 0.000000 0 0 73 300 no 0.000000 1 0.000000 NA 1.000000 24.200000 IGS_067 igs petL|petG petL-petG 69895 70061 0 167 LSC 0.000000 0 0 169 170 no 0.000000 1 0.000000 NA 1.000000 31.400000 petG gene petG petG 70062 70175 1 114 LSC 0.000000 0 0 300 56 no 0.000000 1 0.000000 NA 1.000000 22.900000 IGS_068 igs petG|trnW-CCA petG-trnW-CCA 70176 70314 0 139 LSC 0.007194 1 0 300 193 no 1.000000 2 1.000000 NA 1.000000 56.100000 trnW-CCA tRNA trnW-CCA trnW-CCA 70315 70388 -1 74 LSC 0.000000 0 0 82 119 no 0.000000 1 0.000000 NA 1.000000 24.900000 IGS_069 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 70389 70571 0 183 LSC 0.005495 1 1 156 300 no 1.000000 2 1.000000 NA 0.994536 52.900000 trnP-UGG tRNA trnP-UGG trnP-UGG 70572 70645 -1 74 LSC 0.000000 0 0 63 231 no 0.000000 1 0.000000 NA 1.000000 23.500000 IGS_070 igs trnP-UGG|psaJ trnP-UGG-psaJ 70646 71051 0 406 LSC 0.014778 6 0 137 300 no 1.000000 2 1.000000 NA 1.000000 58.500000 psaJ gene psaJ psaJ 71052 71186 1 135 LSC 0.000000 0 0 6 166 no 0.000000 1 0.000000 NA 1.000000 19.200000 IGS_071 igs psaJ|rpl33 psaJ-rpl33 71187 71647 0 461 LSC 0.011086 5 10 141 145 no 1.000000 2 1.000000 NA 0.978308 59.900000 rpl33 gene rpl33 rpl33 71648 71848 1 201 LSC 0.004975 1 0 81 81 no 1.000000 2 1.000000 NA 1.000000 46.400000 IGS_072 igs rpl33|rps18 rpl33-rps18 71849 72177 0 329 LSC 0.100304 33 0 55 24 yes 1.000000 2 1.000000 NA 1.000000 74.900000 rps18 gene rps18 rps18 72178 72528 1 351 LSC 0.019943 7 0 61 140 no 1.000000 2 1.000000 NA 1.000000 54.600000 IGS_073 igs rps18|rpl20 rps18-rpl20 72529 72773 0 245 LSC 0.012397 3 3 15 13 no 1.000000 2 1.000000 NA 0.987755 46.800000 rpl20 gene rpl20 rpl20 72774 73151 -1 378 LSC 0.021164 8 0 31 93 no 1.000000 2 1.000000 NA 1.000000 53.600000 IGS_074 igs rpl20|rps12 rpl20-rps12 73152 73936 0 785 LSC 0.006402 5 4 49 153 no 1.000000 2 1.000000 NA 0.994904 51.600000 rps12_part1 gene rps12 rps12 73937 74050 -1 114 LSC 0.000000 0 0 132 39 no 0.000000 1 0.000000 NA 1.000000 21.700000 IGS_075 igs rps12|clpP rps12-clpP 74051 74218 0 168 LSC 0.017964 3 1 246 2 no 1.000000 2 1.000000 NA 0.994048 48.500000 clpP gene clpP clpP 74219 75731 -1 1513 LSC 0.028534 43 6 29 23 no 1.000000 2 1.000000 NA 0.996034 62.200000 IGS_076 igs clpP|psbB clpP-psbB 75732 76231 0 500 LSC 0.016000 8 0 6 300 no 1.000000 2 1.000000 NA 1.000000 51.300000 psbB gene psbB psbB 76232 77758 1 1527 LSC 0.001965 3 0 234 39 no 1.000000 2 1.000000 NA 1.000000 47.700000 IGS_077 igs psbB|psbT psbB-psbT 77759 77930 0 172 LSC 0.005814 1 0 300 97 no 1.000000 2 1.000000 NA 1.000000 48.100000 psbT gene psbT psbT 77931 78038 1 108 LSC 0.009259 1 0 132 300 no 1.000000 2 1.000000 NA 1.000000 52.700000 IGS_078 igs psbT|psbN psbT-psbN 78039 78098 0 60 LSC 0.000000 0 0 10 256 no 0.000000 1 0.000000 NA 1.000000 19.500000 psbN gene psbN psbN 78099 78230 -1 132 LSC 0.000000 0 0 70 124 no 0.000000 1 0.000000 NA 1.000000 24.000000 IGS_079 igs psbN|psbH psbN-psbH 78231 78307 0 77 LSC 0.000000 0 0 202 47 no 0.000000 1 0.000000 NA 1.000000 22.300000 psbH gene psbH psbH 78308 78547 1 240 LSC 0.008333 2 0 279 69 no 1.000000 2 1.000000 NA 1.000000 47.500000 IGS_080 igs psbH|petB psbH-petB 78548 78747 0 200 LSC 0.015000 3 0 23 215 no 1.000000 2 1.000000 NA 1.000000 47.800000 petB gene petB petB 78748 80145 1 1398 LSC 0.004295 6 1 127 10 no 1.000000 2 1.000000 NA 0.999285 47.000000 IGS_081 igs petB|petD petB-petD 80146 80358 0 213 LSC 0.009479 2 2 9 166 no 1.000000 2 1.000000 NA 0.990610 44.500000 petD gene petD petD 80359 81627 1 1269 LSC 0.004739 6 3 18 128 no 1.000000 2 1.000000 NA 0.997636 48.100000 IGS_082 igs petD|rpoA petD-rpoA 81628 81767 0 140 LSC 0.007143 1 0 300 52 no 1.000000 2 1.000000 NA 1.000000 45.500000 rpoA gene rpoA rpoA 81768 82790 -1 1023 LSC 0.007874 8 7 11 67 no 1.000000 2 1.000000 NA 0.993157 49.800000 IGS_083 igs rpoA|rps11 rpoA-rps11 82791 82861 0 71 LSC 0.014085 1 0 300 185 no 1.000000 2 1.000000 NA 1.000000 59.500000 rps11 gene rps11 rps11 82862 83278 -1 417 LSC 0.007194 3 0 3 230 no 1.000000 2 1.000000 NA 1.000000 44.300000 IGS_084 igs rps11|rpl36 rps11-rpl36 83279 83406 0 128 LSC 0.000000 0 1 139 102 no 1.000000 2 1.000000 NA 0.992188 45.900000 rpl36 gene rpl36 rpl36 83407 83520 -1 114 LSC 0.008772 1 0 267 165 no 1.000000 2 1.000000 NA 1.000000 54.900000 IGS_085 igs rpl36|infA rpl36-infA 83521 83636 0 116 LSC 0.000000 0 0 11 49 no 0.000000 1 0.000000 NA 1.000000 19.600000 infA gene infA infA 83637 83897 -1 261 LSC 0.049808 13 0 127 3 no 1.000000 2 1.000000 NA 1.000000 66.400000 IGS_086 igs infA|rps8 infA-rps8 83898 84009 0 112 LSC 0.072072 8 1 9 35 yes 1.000000 2 1.000000 NA 0.991071 70.500000 rps8 gene rps8 rps8 84010 84414 -1 405 LSC 0.007407 3 0 13 64 no 1.000000 2 1.000000 NA 1.000000 44.900000 IGS_087 igs rps8|rpl14 rps8-rpl14 84415 84577 0 163 LSC 0.018405 3 0 64 33 no 1.000000 2 1.000000 NA 1.000000 50.600000 rpl14 gene rpl14 rpl14 84578 84943 -1 366 LSC 0.013661 5 0 63 263 no 1.000000 2 1.000000 NA 1.000000 51.500000 IGS_088 igs rpl14|rpl16 rpl14-rpl16 84944 85087 0 144 LSC 0.000000 0 0 51 119 no 0.000000 1 0.000000 NA 1.000000 22.600000 rpl16 gene rpl16 rpl16 85088 86648 -1 1561 LSC 0.015584 24 21 195 11 no 1.000000 2 1.000000 NA 0.986547 54.700000 IGS_089 igs rpl16|rps3 rpl16-rps3 86649 86800 0 152 LSC 0.026316 4 0 42 5 no 1.000000 2 1.000000 NA 1.000000 53.000000 rps3 gene rps3 rps3 86801 87457 -1 657 LSC 0.035008 23 0 55 111 yes 1.000000 2 1.000000 NA 1.000000 68.000000 IGS_090 igs rps3|rpl22 rps3-rpl22 87458 87458 0 1 LSC 0.000000 0 0 70 110 no 0.000000 1 0.000000 NA 1.000000 24.000000 rpl22 gene rpl22 rpl22 87459 88001 -1 543 LSC 0.003683 2 0 71 36 no 1.000000 2 1.000000 NA 1.000000 47.400000 IGS_091 igs rpl22|rps19 rpl22-rps19 88002 88054 0 53 LSC 0.037736 2 0 239 15 no 1.000000 2 1.000000 NA 1.000000 60.300000 rps19 gene rps19 rps19 88055 88333 -1 279 LSC 0.025090 7 0 10 16 no 1.000000 2 1.000000 NA 1.000000 52.700000 IGS_092 igs rps19|rpl2 rps19-rpl2 88334 88390 0 57 IRb 0.070175 4 0 49 24 yes 1.000000 2 1.000000 NA 1.000000 70.600000 rpl2 gene rpl2 rpl2 88391 89215 -1 825 IRb 0.006061 5 0 15 300 no 1.000000 2 1.000000 NA 1.000000 48.400000 IGS_093 igs rpl2|rpl23 rpl2-rpl23 89216 89272 0 57 IRb 0.000000 0 0 195 300 no 0.000000 1 0.000000 NA 1.000000 33.400000 rpl23 gene rpl23 rpl23 89273 89539 -1 267 IRb 0.000000 0 0 252 80 no 0.000000 1 0.000000 NA 1.000000 24.800000 IGS_094 igs rpl23|trnI-CAU rpl23-trnI-CAU 89540 89717 0 178 IRb 0.022989 4 4 300 143 no 1.000000 2 1.000000 NA 0.977528 63.600000 trnI-CAU tRNA trnI-CAU trnI-CAU 89718 89791 -1 74 IRb 0.000000 0 0 70 69 no 0.000000 1 0.000000 NA 1.000000 23.900000 IGS_095 igs trnI-CAU|ycf2 trnI-CAU-ycf2 89792 90112 0 321 IRb 0.088608 28 5 144 4 yes 1.000000 2 1.000000 NA 0.984424 73.100000 ycf2 gene ycf2 ycf2 90113 96712 1 6600 IRb 0.006304 40 255 6 57 no 1.000000 2 1.000000 NA 0.961364 45.300000 IGS_096 igs ycf2|trnL-CAA ycf2-trnL-CAA 96713 96873 0 161 IRb 0.018634 3 0 145 193 no 1.000000 2 1.000000 NA 1.000000 59.100000 trnL-CAA tRNA trnL-CAA trnL-CAA 96874 96954 -1 81 IRb 0.000000 0 0 84 112 no 0.000000 1 0.000000 NA 1.000000 25.100000 IGS_097 igs trnL-CAA|ndhB trnL-CAA-ndhB 96955 97512 0 558 IRb 0.003656 2 11 165 180 no 1.000000 2 1.000000 NA 0.980287 59.300000 ndhB gene ndhB ndhB 97513 99718 -1 2206 SSC 0.008632 19 5 300 73 no 1.000000 2 1.000000 NA 0.997733 52.900000 IGS_098 igs ndhB|rps7 ndhB-rps7 99719 99770 0 52 SSC 0.000000 0 0 300 21 no 0.000000 1 0.000000 NA 1.000000 20.300000 rps7 gene rps7 rps7 99771 100289 -1 519 SSC 0.042389 22 0 300 51 yes 1.000000 2 1.000000 NA 1.000000 70.300000 IGS_099 igs rps7|rps12 rps7-rps12 100290 100342 0 53 SSC 0.018868 1 0 55 185 no 1.000000 2 1.000000 NA 1.000000 52.500000 rps12_part2 gene rps12 rps12 100343 101133 -1 791 SSC 0.006321 5 0 1 120 no 1.000000 2 1.000000 NA 1.000000 47.500000 IGS_100 igs rps12|trnV-GAC rps12-trnV-GAC 101134 102660 0 1527 SSC 0.011834 18 6 210 128 no 1.000000 2 1.000000 NA 0.996071 60.500000 trnV-GAC tRNA trnV-GAC trnV-GAC 102661 102732 1 72 SSC 0.000000 0 0 300 56 no 0.000000 1 0.000000 NA 1.000000 22.900000 IGS_101 igs trnV-GAC|rrn16 trnV-GAC-rrn16 102733 102960 0 228 SSC 0.061404 14 0 300 5 yes 1.000000 2 1.000000 NA 1.000000 68.100000 rrn16 rRNA rrn16 rrn16 102961 104451 1 1491 SSC 0.006036 9 0 112 20 no 1.000000 2 1.000000 NA 1.000000 48.700000 IGS_102 igs rrn16|trnI-GAU rrn16-trnI-GAU 104452 104743 0 292 SSC 0.044521 13 0 57 106 no 1.000000 2 1.000000 NA 1.000000 67.400000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 104744 104780 1 37 SSC 0.000000 0 0 15 69 no 0.000000 1 0.000000 NA 1.000000 19.900000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 105731 105765 1 35 SSC 0.000000 0 0 300 151 no 0.000000 1 0.000000 NA 1.000000 30.100000 IGS_105 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 105766 105840 0 75 SSC 0.000000 0 5 300 76 no 1.000000 2 1.000000 NA 0.933333 47.600000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 105841 105878 1 38 SSC 0.000000 0 0 300 38 no 0.000000 1 0.000000 NA 1.000000 21.600000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 106709 106743 1 35 SSC 0.000000 0 0 149 77 no 0.000000 1 0.000000 NA 1.000000 24.500000 IGS_108 igs trnA-UGC|rrn23 trnA-UGC-rrn23 106744 106906 0 163 SSC 0.012270 2 0 184 179 no 1.000000 2 1.000000 NA 1.000000 58.000000 rrn23 rRNA rrn23 rrn23 106907 109716 1 2810 SSC 0.005704 16 5 52 79 no 1.000000 2 1.000000 NA 0.998221 48.400000 IGS_109 igs rrn23|rrn4.5 rrn23-rrn4.5 109717 109815 0 99 SSC 0.010101 1 0 124 177 no 1.000000 2 1.000000 NA 1.000000 52.600000 rrn4.5 rRNA rrn4.5 rrn4.5 109816 109918 1 103 SSC 0.000000 0 0 19 74 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_110 igs rrn4.5|rrn5 rrn4.5-rrn5 109919 110174 0 256 SSC 0.015625 4 0 122 36 no 1.000000 2 1.000000 NA 1.000000 49.200000 rrn5 rRNA rrn5 rrn5 110175 110295 1 121 SSC 0.008264 1 0 11 63 no 1.000000 2 1.000000 NA 1.000000 43.100000 IGS_111 igs rrn5|trnR-ACG rrn5-trnR-ACG 110296 110550 0 255 SSC 0.015748 4 1 84 79 no 1.000000 2 1.000000 NA 0.996078 52.900000 trnR-ACG tRNA trnR-ACG trnR-ACG 110551 110624 1 74 SSC 0.000000 0 0 26 5 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_112 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 110625 111219 0 595 SSC 0.015152 9 1 100 33 no 1.000000 2 1.000000 NA 0.998319 55.000000 trnN-GUU tRNA trnN-GUU trnN-GUU 111220 111291 -1 72 SSC 0.013889 1 0 190 5 no 1.000000 2 1.000000 NA 1.000000 45.900000 IGS_113 igs trnN-GUU|ndhF trnN-GUU-ndhF 111292 111620 0 329 SSC 0.021201 6 46 38 122 no 1.000000 2 1.000000 NA 0.860182 55.100000 ndhF gene ndhF ndhF 111621 113864 -1 2244 SSC 0.229008 30 2113 66 11 yes 1.000000 2 1.000000 NA 0.058378 55.400000 IGS_114 igs ndhF|rpl32 ndhF-rpl32 113865 115099 0 1235 SSC 0.275862 48 1061 226 214 yes 1.000000 2 1.000000 NA 0.140891 75.400000 rpl32 gene rpl32 rpl32 115100 115309 1 210 SSC NA 0 210 100 4 no 1.000000 2 1.000000 NA 0.000000 25.300000 IGS_115 igs rpl32|ycf1 rpl32-ycf1 115310 115820 0 511 SSC 0.106383 15 370 300 49 no 1.000000 2 1.000000 NA 0.275930 62.700000 ycf1 gene ycf1 ycf1 115821 122087 1 6267 SSC 0.034389 189 771 11 208 no 1.000000 2 1.000000 NA 0.876975 60.400000 IGS_116 igs ycf1|rps15 ycf1-rps15 122088 122421 0 334 SSC 0.015152 5 4 25 23 no 1.000000 2 1.000000 NA 0.988024 49.800000 rps15 gene rps15 rps15 122422 122694 1 273 SSC 0.010989 3 0 47 11 no 1.000000 2 1.000000 NA 1.000000 44.600000 IGS_117 igs rps15|ndhH rps15-ndhH 122695 122804 0 110 SSC 0.018182 2 0 100 13 no 1.000000 2 1.000000 NA 1.000000 48.900000 ndhH gene ndhH ndhH 122805 123986 1 1182 SSC 0.007614 9 0 23 300 no 1.000000 2 1.000000 NA 1.000000 49.900000 IGS_118 igs ndhH|ndhA ndhH-ndhA 123987 123987 0 1 SSC 0.000000 0 0 216 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ndhA gene ndhA ndhA 123988 126175 1 2188 SSC 0.008227 18 0 217 3 no 1.000000 2 1.000000 NA 1.000000 47.300000 IGS_119 igs ndhA|ndhI ndhA-ndhI 126176 126294 0 119 SSC 0.016807 2 0 24 236 no 1.000000 2 1.000000 NA 1.000000 49.000000 ndhI gene ndhI ndhI 126295 126810 1 516 SSC 0.007752 4 0 17 2 no 1.000000 2 1.000000 NA 1.000000 46.600000 IGS_120 igs ndhI|ndhG ndhI-ndhG 126811 127175 0 365 SSC 0.024658 9 0 25 66 no 1.000000 2 1.000000 NA 1.000000 54.900000 ndhG gene ndhG ndhG 127176 127706 1 531 SSC 0.005650 3 0 142 10 no 1.000000 2 1.000000 NA 1.000000 46.300000 IGS_121 igs ndhG|ndhE ndhG-ndhE 127707 127945 0 239 SSC 0.008368 2 0 141 167 no 1.000000 2 1.000000 NA 1.000000 52.900000 ndhE gene ndhE ndhE 127946 128251 1 306 SSC 0.003268 1 0 90 78 no 1.000000 2 1.000000 NA 1.000000 45.400000 IGS_122 igs ndhE|psaC ndhE-psaC 128252 128579 0 328 SSC 0.006250 2 8 138 300 no 1.000000 2 1.000000 NA 0.975610 54.400000 psaC gene psaC psaC 128580 128825 1 246 SSC 0.000000 0 0 113 300 no 0.000000 1 0.000000 NA 1.000000 27.200000 IGS_123 igs psaC|ndhD psaC-ndhD 128826 128956 0 131 SSC 0.000000 0 6 300 287 no 1.000000 2 1.000000 NA 0.954198 56.900000 ndhD gene ndhD ndhD 128957 130459 1 1503 SSC 0.002661 4 0 300 37 no 1.000000 2 1.000000 NA 1.000000 48.000000 IGS_124 igs ndhD|ccsA ndhD-ccsA 130460 130668 0 209 SSC 0.033493 7 0 95 9 no 1.000000 2 1.000000 NA 1.000000 57.400000 ccsA gene ccsA ccsA 130669 131649 -1 981 SSC 0.009174 9 0 34 23 no 1.000000 2 1.000000 NA 1.000000 50.800000 IGS_125 igs ccsA|trnL-UAG ccsA-trnL-UAG 131650 131761 0 112 SSC 0.008929 1 0 272 185 no 1.000000 2 1.000000 NA 1.000000 56.500000 trnL-UAG tRNA trnL-UAG trnL-UAG 131762 131841 -1 80 SSC 0.000000 0 0 88 105 no 0.000000 1 0.000000 NA 1.000000 25.400000 IGS_126 igs trnL-UAG|trnL-CAA trnL-UAG-trnL-CAA 131842 133258 0 1417 IRa 0.006401 9 11 168 165 no 1.000000 2 1.000000 NA 0.992237 60.600000 trnL-CAA tRNA trnL-CAA trnL-CAA 133259 133339 1 81 IRa 0.000000 0 0 112 84 no 0.000000 1 0.000000 NA 1.000000 25.100000 IGS_127 igs trnL-CAA|ycf2 trnL-CAA-ycf2 133340 133500 0 161 IRa 0.018634 3 0 193 145 no 1.000000 2 1.000000 NA 1.000000 59.100000 ycf2 gene ycf2 ycf2 133501 140100 -1 6600 IRa 0.006304 40 255 57 6 no 1.000000 2 1.000000 NA 0.961364 45.300000 IGS_128 igs ycf2|trnI-CAU ycf2-trnI-CAU 140101 140421 0 321 IRa 0.088608 28 5 4 144 yes 1.000000 2 1.000000 NA 0.984424 73.100000 trnI-CAU tRNA trnI-CAU trnI-CAU 140422 140495 1 74 IRa 0.000000 0 0 69 70 no 0.000000 1 0.000000 NA 1.000000 23.900000 IGS_129 igs trnI-CAU|rpl23 trnI-CAU-rpl23 140496 140673 0 178 IRa 0.022989 4 4 143 300 no 1.000000 2 1.000000 NA 0.977528 63.600000 rpl23 gene rpl23 rpl23 140674 140940 1 267 IRa 0.000000 0 0 80 252 no 0.000000 1 0.000000 NA 1.000000 24.800000 IGS_130 igs rpl23|rpl2 rpl23-rpl2 140941 140997 0 57 IRa 0.000000 0 0 300 195 no 0.000000 1 0.000000 NA 1.000000 33.400000 rpl2 gene rpl2 rpl2 140998 141822 1 825 IRa 0.006061 5 0 300 15 no 1.000000 2 1.000000 NA 1.000000 48.400000 IGS_131 igs rpl2|trnH-GUG rpl2-trnH-GUG 141823 7 0 183 IRa 0.028409 5 7 24 300 no 1.000000 2 1.000000 NA 0.961749 59.200000