feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score psbC gene psbC psbC 1042 2427 1 1386 LSC 0.043290 60 0 61 33 no 1.000000 2 1.000000 NA 1.000000 71.100000 IGS_001 igs psbC|rpl20 psbC-rpl20 2428 3561 0 1134 LSC 0.217598 183 293 33 77 no 1.000000 2 1.000000 NA 0.741623 80.200000 rpl20 gene rpl20 rpl20 3562 3921 1 360 LSC 0.028490 10 9 1 3 no 1.000000 2 1.000000 NA 0.975000 57.500000 IGS_002 igs rpl20|rpl32 rpl20-rpl32 3922 4072 0 151 LSC 0.169014 24 9 15 59 no 1.000000 2 1.000000 NA 0.940397 78.200000 rpl32 gene rpl32 rpl32 4073 4227 1 155 LSC 0.051613 8 0 15 3 no 1.000000 2 1.000000 NA 1.000000 66.700000 IGS_003 igs rpl32|rps2 rpl32-rps2 4228 6005 0 1778 LSC 0.276527 258 843 3 33 yes 1.000000 2 1.000000 NA 0.524747 72.500000 rps2 gene rps2 rps2 6006 8759 1 2754 LSC 0.060837 160 124 28 17 no 1.000000 2 1.000000 NA 0.954975 76.500000 IGS_004 igs rps2|infA rps2-infA 8760 9425 0 666 LSC 0.203612 124 57 11 50 no 1.000000 2 1.000000 NA 0.914414 83.400000 infA gene infA infA 9426 9707 1 282 LSC 0.024823 7 0 23 2 no 1.000000 2 1.000000 NA 1.000000 51.900000 IGS_005 igs infA|psbB infA-psbB 9708 11021 0 1314 LSC 0.259950 209 510 30 95 no 1.000000 2 1.000000 NA 0.611872 76.300000 psbB gene psbB psbB 11022 12548 1 1527 LSC 0.023576 36 0 26 2 no 1.000000 2 1.000000 NA 1.000000 57.400000 IGS_006 igs psbB|DR496_pgp007 psbB-DR496_pgp007 12549 12744 0 196 LSC 0.177305 25 55 72 1 no 1.000000 2 1.000000 NA 0.719388 70.900000 DR496_pgp007 gene DR496_pgp007 DR496_pgp007 12745 13116 -1 372 LSC 0.324786 38 255 0 9 no 1.000000 2 1.000000 NA 0.314516 65.400000 IGS_007 igs DR496_pgp007|psbT DR496_pgp007-psbT 13117 13794 0 678 LSC 0.161798 72 233 9 59 no 1.000000 2 1.000000 NA 0.656342 76.000000 psbT gene psbT psbT 13795 13890 1 96 LSC 0.010417 1 0 70 11 no 1.000000 2 1.000000 NA 1.000000 44.300000 IGS_008 igs psbT|psbN psbT-psbN 13891 14303 0 413 LSC 0.309446 95 106 36 48 no 1.000000 2 1.000000 NA 0.743341 76.600000 psbN gene psbN psbN 14304 14438 -1 135 LSC 0.029630 4 0 3 126 no 1.000000 2 1.000000 NA 1.000000 54.800000 IGS_009 igs psbN|psbH psbN-psbH 14439 14523 0 85 LSC 0.000000 0 0 8 41 no 0.000000 1 0.000000 NA 1.000000 19.400000 psbH gene psbH psbH 14524 14778 1 255 LSC 0.043137 11 0 93 2 no 1.000000 2 1.000000 NA 1.000000 62.500000 IGS_010 igs psbH|DR496_pgp011 psbH-DR496_pgp011 14779 15344 0 566 LSC 0.213333 112 41 3 11 no 1.000000 2 1.000000 NA 0.927562 82.500000 DR496_pgp011 gene DR496_pgp011 DR496_pgp011 15345 16268 -1 924 LSC 0.353982 240 246 1 8 yes 1.000000 2 1.000000 NA 0.733766 77.600000 IGS_011 igs DR496_pgp011|psbK DR496_pgp011-psbK 16269 16290 0 22 LSC 0.136364 3 0 11 26 no 1.000000 2 1.000000 NA 1.000000 73.300000 psbK gene psbK psbK 16291 16431 1 141 LSC 0.021277 3 0 4 7 no 1.000000 2 1.000000 NA 1.000000 50.000000 IGS_012 igs psbK|DR496_pgp013 psbK-DR496_pgp013 16432 16473 0 42 LSC 0.119048 5 0 72 10 no 1.000000 2 1.000000 NA 1.000000 73.200000 DR496_pgp013 gene DR496_pgp013 DR496_pgp013 16474 16797 1 324 LSC 0.257812 33 196 21 2 no 1.000000 2 1.000000 NA 0.395062 65.600000 IGS_013 igs DR496_pgp013|DR496_pgp014 DR496_pgp013-DR496_pgp014 16798 17394 0 597 LSC 0.433846 141 272 9 46 yes 1.000000 2 1.000000 NA 0.544389 73.700000 DR496_pgp014 gene DR496_pgp014 DR496_pgp014 17395 18063 1 669 LSC 0.356688 112 355 0 2 no 1.000000 2 1.000000 NA 0.469357 72.100000 IGS_014 igs DR496_pgp014|psbA DR496_pgp014-psbA 18064 18236 0 173 LSC 0.147059 25 3 16 71 no 1.000000 2 1.000000 NA 0.982659 75.400000 psbA gene psbA psbA 18237 21599 1 3363 LSC 0.052731 56 2301 40 9 no 1.000000 2 1.000000 NA 0.315789 56.800000 DR496_pgp016 gene DR496_pgp016 DR496_pgp016 20337 20663 -1 327 LSC NA 0 327 300 158 no 1.000000 2 1.000000 NA 0.000000 37.400000 IGS_016 igs DR496_pgp016|DR496_pgp017 DR496_pgp016-DR496_pgp017 20664 21884 0 1221 LSC 0.144860 155 151 300 1 no 1.000000 2 1.000000 NA 0.876331 81.600000 DR496_pgp017 gene DR496_pgp017 DR496_pgp017 21885 22286 1 402 LSC 0.395522 159 0 1 5 no 1.000000 2 1.000000 NA 1.000000 74.700000 IGS_017 igs DR496_pgp017|ftsH DR496_pgp017-ftsH 22287 23002 0 716 LSC 0.384068 270 13 0 50 yes 1.000000 2 1.000000 NA 0.981844 80.500000 ftsH gene ftsH ftsH 23003 35327 -1 12325 LSC 0.159243 1591 2334 1 3 no 1.000000 2 1.000000 NA 0.810629 73.500000 IGS_018 igs ftsH|trnT(ugu) ftsH-trnT(ugu) 35328 36721 0 1394 LSC 0.282209 276 416 0 75 yes 1.000000 2 1.000000 NA 0.701578 76.600000 trnT(ugu) tRNA trnT(ugu) trnT(ugu) 36722 36794 -1 73 LSC 0.000000 0 0 6 2 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_019 igs trnT(ugu)|DR496_pgp100 trnT(ugu)-DR496_pgp100 36795 37203 0 409 LSC 0.086735 17 213 79 300 no 1.000000 2 1.000000 NA 0.479218 66.900000 DR496_pgp100 gene DR496_pgp100 DR496_pgp100 37204 37596 -1 393 LSC NA 0 393 40 300 no 1.000000 2 1.000000 NA 0.000000 29.900000 IGS_020 igs DR496_pgp100|DR496_pgp099 DR496_pgp100-DR496_pgp099 37597 37612 0 16 LSC NA 0 16 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 DR496_pgp099 gene DR496_pgp099 DR496_pgp099 37613 38005 -1 393 LSC NA 0 393 300 161 no 1.000000 2 1.000000 NA 0.000000 39.000000 IGS_021 igs DR496_pgp099|rpoC2 DR496_pgp099-rpoC2 38006 38597 0 592 LSC 0.227273 5 570 300 6 no 1.000000 2 1.000000 NA 0.037162 55.600000 rpoC2 gene rpoC2 rpoC2 38598 48329 -1 9732 LSC 0.116438 957 1513 300 5 no 1.000000 2 1.000000 NA 0.844533 74.500000 IGS_022 igs rpoC2|rps3 rpoC2-rps3 48330 49030 0 701 LSC 0.146096 58 304 86 57 no 1.000000 2 1.000000 NA 0.566334 75.400000 rps3 gene rps3 rps3 49031 51130 -1 2100 LSC 0.055142 111 87 9 6 no 1.000000 2 1.000000 NA 0.958571 76.100000 IGS_023 igs rps3|chlN rps3-chlN 51131 52973 0 1843 LSC 0.218519 295 493 116 24 no 1.000000 2 1.000000 NA 0.732501 78.600000 chlN gene chlN chlN 52974 54356 -1 1383 LSC 0.062184 86 0 2 1 no 1.000000 2 1.000000 NA 1.000000 74.100000 IGS_024 igs chlN|DR496_pgp095 chlN-DR496_pgp095 54357 54846 0 490 LSC 0.340764 107 176 11 5 no 1.000000 2 1.000000 NA 0.640816 73.000000 DR496_pgp095 gene DR496_pgp095 DR496_pgp095 54847 55254 -1 408 LSC 0.278607 112 6 27 3 no 1.000000 2 1.000000 NA 0.985294 76.400000 IGS_025 igs DR496_pgp095|rpoBb DR496_pgp095-rpoBb 55255 57189 0 1935 LSC 0.244304 386 355 0 81 yes 1.000000 2 1.000000 NA 0.816537 78.900000 rpoBb gene rpoBb rpoBb 57190 60525 -1 3336 LSC 0.033708 45 2001 0 96 no 1.000000 2 1.000000 NA 0.400180 49.500000 IGS_026 igs rpoBb|rpoBa rpoBb-rpoBa 60526 62367 0 1842 LSC 0.233803 332 422 59 46 yes 1.000000 2 1.000000 NA 0.770901 81.300000 rpoBa gene rpoBa rpoBa 62368 64731 -1 2364 LSC 0.081329 186 77 8 7 no 1.000000 2 1.000000 NA 0.967428 78.000000 IGS_027 igs rpoBa|psbF rpoBa-psbF 64732 66667 0 1936 LSC 0.184030 295 333 32 140 no 1.000000 2 1.000000 NA 0.827996 81.700000 psbF gene psbF psbF 66668 66802 1 135 LSC 0.000000 0 0 30 5 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_028 igs psbF|psbL psbF-psbL 66803 67307 0 505 LSC 0.203753 76 132 165 95 no 1.000000 2 1.000000 NA 0.738614 82.800000 psbL gene psbL psbL 67308 67424 1 117 LSC 0.034188 4 0 32 7 no 1.000000 2 1.000000 NA 1.000000 57.700000 IGS_029 igs psbL|trnL(uaa) psbL-trnL(uaa) 67425 68480 0 1056 LSC 0.251806 244 87 0 42 no 1.000000 2 1.000000 NA 0.917614 82.700000 trnL(uaa)_part1 tRNA trnL(uaa) trnL(uaa) 68481 68514 1 34 LSC 0.000000 0 0 11 8 no 0.000000 1 0.000000 NA 1.000000 19.400000 trnL(uaa)_part2 tRNA trnL(uaa) trnL(uaa) 68808 68857 1 50 LSC 0.020000 1 0 7 18 no 1.000000 2 1.000000 NA 1.000000 49.500000 IGS_032 igs trnL(uaa)|petG trnL(uaa)-petG 68858 69226 0 369 LSC 0.172603 63 4 31 120 no 1.000000 2 1.000000 NA 0.989160 77.300000 petG gene petG petG 69227 69340 1 114 LSC 0.000000 0 0 2 6 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_033 igs petG|rps12 petG-rps12 69341 69779 0 439 LSC 0.215777 93 8 116 28 no 1.000000 2 1.000000 NA 0.981777 79.300000 rps12 gene rps12 rps12 69780 70172 -1 393 LSC 0.033079 13 0 4 9 no 1.000000 2 1.000000 NA 1.000000 58.800000 IGS_034 igs rps12|psaJ rps12-psaJ 70173 71132 0 960 LSC 0.257840 148 386 90 17 no 1.000000 2 1.000000 NA 0.597917 75.000000 psaJ gene psaJ psaJ 71133 71258 -1 126 LSC 0.023810 3 0 0 19 no 1.000000 2 1.000000 NA 1.000000 51.200000 IGS_035 igs psaJ|atpI psaJ-atpI 71259 71786 0 528 LSC 0.159041 73 69 44 69 no 1.000000 2 1.000000 NA 0.869318 83.100000 atpI gene atpI atpI 71787 72518 -1 732 LSC 0.015027 11 0 26 57 no 1.000000 2 1.000000 NA 1.000000 54.300000 IGS_036 igs atpI|psbJ atpI-psbJ 72519 74565 0 2047 LSC 0.257426 364 633 293 114 yes 1.000000 2 1.000000 NA 0.690767 83.700000 psbJ gene psbJ psbJ 74566 74694 -1 129 LSC 0.007752 1 0 4 62 no 1.000000 2 1.000000 NA 1.000000 42.300000 IGS_037 igs psbJ|psaA psbJ-psaA 74695 76268 0 1574 LSC 0.132597 144 488 14 17 no 1.000000 2 1.000000 NA 0.689962 76.100000 psaA_part2 gene psaA psaA 76269 76448 -1 180 LSC 0.027778 5 0 37 3 no 1.000000 2 1.000000 NA 1.000000 53.700000 IGS_038 igs psaA|DR496_pgp084 psaA-DR496_pgp084 76449 77000 0 552 LSC 0.202934 83 143 63 59 no 1.000000 2 1.000000 NA 0.740942 81.100000 DR496_pgp084 gene DR496_pgp084 DR496_pgp084 77001 77426 1 426 LSC 0.331950 80 185 3 0 no 1.000000 2 1.000000 NA 0.565728 69.700000 IGS_039 igs DR496_pgp084|psbD DR496_pgp084-psbD 77427 77544 0 118 LSC 0.081081 6 44 17 33 no 1.000000 2 1.000000 NA 0.627119 63.400000 psbD gene psbD psbD 77545 85710 -1 8166 LSC 0.041431 44 7104 59 48 no 1.000000 2 1.000000 NA 0.130051 49.500000 DR496_pgp082 gene DR496_pgp082 DR496_pgp082 82669 83034 1 366 LSC NA 0 366 300 300 no 1.000000 2 1.000000 NA 0.000000 41.400000 IGS_041 igs DR496_pgp082|psaA DR496_pgp082-psaA 83035 86599 0 3565 LSC 0.205904 286 2176 300 69 no 1.000000 2 1.000000 NA 0.389621 69.800000 psaA_part3 gene psaA psaA 86600 88586 -1 1987 LSC 0.028183 56 0 9 22 no 1.000000 2 1.000000 NA 1.000000 59.600000 IGS_042 igs psaA|trnN(guu) psaA-trnN(guu) 88587 88896 0 310 LSC 0.241935 75 0 12 92 no 1.000000 2 1.000000 NA 1.000000 73.600000 trnN(guu) tRNA trnN(guu) trnN(guu) 88897 88968 -1 72 LSC 0.000000 0 0 5 20 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_043 igs trnN(guu)|petL trnN(guu)-petL 88969 89698 0 730 LSC 0.204545 90 290 77 14 no 1.000000 2 1.000000 NA 0.602740 74.900000 petL gene petL petL 89699 89797 -1 99 LSC 0.030303 3 0 13 17 no 1.000000 2 1.000000 NA 1.000000 55.900000 IGS_044 igs petL|psaC petL-psaC 89798 90421 0 624 LSC 0.108280 17 467 21 72 no 1.000000 2 1.000000 NA 0.251603 61.900000 psaC gene psaC psaC 90422 90667 -1 246 LSC 0.020325 5 0 22 8 no 1.000000 2 1.000000 NA 1.000000 49.800000 IGS_045 igs psaC|trnMf(cau) psaC-trnMf(cau) 90668 90878 0 211 LSC 0.160194 33 5 12 75 no 1.000000 2 1.000000 NA 0.976303 75.700000 trnMf(cau) tRNA trnMf(cau) trnMf(cau) 90879 90952 -1 74 LSC 0.000000 0 0 20 1 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_046 igs trnMf(cau)|chlB trnMf(cau)-chlB 90953 91489 0 537 LSC 0.245545 124 32 94 56 yes 1.000000 2 1.000000 NA 0.940410 86.200000 chlB gene chlB chlB 91490 93292 1 1803 LSC 0.073761 131 27 88 5 no 1.000000 2 1.000000 NA 0.985025 76.500000 IGS_047 igs chlB|ycf12 chlB-ycf12 93293 93407 0 115 LSC 0.081081 6 41 9 8 no 1.000000 2 1.000000 NA 0.643478 63.300000 ycf12 gene ycf12 ycf12 93408 93509 1 102 LSC 0.068627 7 0 1 0 no 1.000000 2 1.000000 NA 1.000000 68.600000 IGS_048 igs ycf12|trnK(uuu) ycf12-trnK(uuu) 93510 94119 0 610 LSC 0.264770 121 153 9 75 no 1.000000 2 1.000000 NA 0.749180 78.600000 trnK(uuu) tRNA trnK(uuu) trnK(uuu) 94120 94191 1 72 LSC 0.000000 0 0 7 3 no 0.000000 1 0.000000 NA 1.000000 19.000000 IGS_049 igs trnK(uuu)|trnH(gug) trnK(uuu)-trnH(gug) 94192 94380 0 189 LSC 0.187845 34 8 79 80 no 1.000000 2 1.000000 NA 0.957672 82.500000 trnH(gug) tRNA trnH(gug) trnH(gug) 94381 94452 1 72 LSC 0.000000 0 0 3 8 no 0.000000 1 0.000000 NA 1.000000 19.000000 IGS_050 igs trnH(gug)|trnS(uga) trnH(gug)-trnS(uga) 94453 95238 0 786 LSC 0.376851 280 43 75 91 yes 1.000000 2 1.000000 NA 0.945293 89.100000 trnS(uga) tRNA trnS(uga) trnS(uga) 95239 95325 -1 87 LSC 0.000000 0 0 2 4 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_051 igs trnS(uga)|atpE trnS(uga)-atpE 95326 95516 0 191 LSC 0.149733 28 4 89 27 no 1.000000 2 1.000000 NA 0.979058 76.600000 atpE gene atpE atpE 95517 95927 -1 411 LSC 0.012165 5 0 23 56 no 1.000000 2 1.000000 NA 1.000000 48.500000 IGS_052 igs atpE|rps7 atpE-rps7 95928 96340 0 413 LSC 0.248588 88 59 128 6 no 1.000000 2 1.000000 NA 0.857143 77.500000 rps7 gene rps7 rps7 96341 96844 -1 504 LSC 0.027778 14 0 0 15 no 1.000000 2 1.000000 NA 1.000000 57.700000 IGS_053 igs rps7|trnD(guc) rps7-trnD(guc) 96845 96939 0 95 LSC 0.087912 8 4 41 5 no 1.000000 2 1.000000 NA 0.957895 75.000000 trnD(guc) tRNA trnD(guc) trnD(guc) 96940 97013 -1 74 LSC 0.013514 1 0 11 4 no 1.000000 2 1.000000 NA 1.000000 45.600000 IGS_054 igs trnD(guc)|rps11 trnD(guc)-rps11 97014 97671 0 658 LSC 0.296774 184 38 68 24 yes 1.000000 2 1.000000 NA 0.942249 85.200000 rps11 gene rps11 rps11 97672 98064 -1 393 LSC 0.045802 18 0 13 19 no 1.000000 2 1.000000 NA 1.000000 66.700000 IGS_055 igs rps11|trnY(gua) rps11-trnY(gua) 98065 98415 0 351 LSC 0.182692 57 39 83 85 no 1.000000 2 1.000000 NA 0.888889 82.900000 trnY(gua) tRNA trnY(gua) trnY(gua) 98416 98498 -1 83 LSC 0.000000 0 0 5 2 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_056 igs trnY(gua)|rbcL trnY(gua)-rbcL 98499 98774 0 276 LSC 0.159420 44 0 88 81 no 1.000000 2 1.000000 NA 1.000000 78.600000 rbcL gene rbcL rbcL 98775 100202 -1 1428 LSC 0.033613 48 0 16 37 no 1.000000 2 1.000000 NA 1.000000 64.300000 IGS_057 igs rbcL|atpF rbcL-atpF 100203 100891 0 689 LSC 0.173077 72 273 50 6 no 1.000000 2 1.000000 NA 0.603774 74.300000 atpF gene atpF atpF 100892 101440 -1 549 LSC 0.029144 16 0 9 41 no 1.000000 2 1.000000 NA 1.000000 60.100000 IGS_058 igs atpF|DR496_pgp072 atpF-DR496_pgp072 101441 102098 0 658 LSC 0.154930 99 19 29 4 no 1.000000 2 1.000000 NA 0.971125 81.800000 DR496_pgp072 gene DR496_pgp072 DR496_pgp072 102099 102578 -1 480 IRb 0.386760 111 193 11 2 no 1.000000 2 1.000000 NA 0.597917 71.400000 IGS_059 igs DR496_pgp072|atpH DR496_pgp072-atpH 102579 102708 0 130 IRb 0.333333 21 67 0 18 no 1.000000 2 1.000000 NA 0.484615 66.100000 atpH gene atpH atpH 102709 102957 -1 249 IRb 0.044177 11 0 11 86 no 1.000000 2 1.000000 NA 1.000000 63.700000 IGS_060 igs atpH|DR496_pgp070 atpH-DR496_pgp070 102958 103031 0 74 IRb 0.000000 0 0 92 12 no 0.000000 1 0.000000 NA 1.000000 19.700000 DR496_pgp070 gene DR496_pgp070 DR496_pgp070 103032 103379 -1 348 IRb 0.399371 127 30 166 3 no 1.000000 2 1.000000 NA 0.913793 77.600000 IGS_061 igs DR496_pgp070|DR496_pgp069 DR496_pgp070-DR496_pgp069 103380 103661 0 282 IRb 0.424908 116 9 0 1 yes 1.000000 2 1.000000 NA 0.968085 75.600000 DR496_pgp069 gene DR496_pgp069 DR496_pgp069 103662 104438 1 777 IRb 0.373259 268 59 1 1 yes 1.000000 2 1.000000 NA 0.924067 82.900000 IGS_062 igs DR496_pgp069|DR496_pgp068 DR496_pgp069-DR496_pgp068 104439 104842 0 404 IRb 0.402174 148 36 0 2 no 1.000000 2 1.000000 NA 0.910891 78.400000 DR496_pgp068 gene DR496_pgp068 DR496_pgp068 104843 105658 -1 816 IRb 0.382239 198 298 0 0 no 1.000000 2 1.000000 NA 0.634804 74.700000 IGS_063 igs DR496_pgp068|DR496_pgp067 DR496_pgp068-DR496_pgp067 105659 106063 0 405 IRb 0.450928 170 28 2 2 yes 1.000000 2 1.000000 NA 0.930864 79.100000 DR496_pgp067 gene DR496_pgp067 DR496_pgp067 106064 106444 1 381 IRb 0.434505 136 68 1 18 no 1.000000 2 1.000000 NA 0.821522 75.500000 IGS_064 igs DR496_pgp067|rrs DR496_pgp067-rrs 106445 106762 0 318 IRb 0.172932 46 52 1 73 no 1.000000 2 1.000000 NA 0.836478 74.600000 rrs rRNA rrs rrs 106763 108290 1 1528 IRb 0.026405 39 51 43 300 no 1.000000 2 1.000000 NA 0.966623 65.200000 IGS_065 igs rrs|DR496_pgp066 rrs-DR496_pgp066 108291 108597 0 307 IRb NA 0 307 56 300 no 1.000000 2 1.000000 NA 0.000000 29.300000 DR496_pgp066 gene DR496_pgp066 DR496_pgp066 108598 109077 -1 480 IRb NA 0 480 300 164 no 1.000000 2 1.000000 NA 0.000000 41.000000 IGS_066 igs DR496_pgp066|trnI(gau) DR496_pgp066-trnI(gau) 109078 109624 0 547 IRb 0.140271 31 326 300 15 no 1.000000 2 1.000000 NA 0.404022 65.900000 trnI(gau) tRNA trnI(gau) trnI(gau) 109625 109698 1 74 IRb 0.013514 1 0 3 14 no 1.000000 2 1.000000 NA 1.000000 45.500000 IGS_067 igs trnI(gau)|trnA(ugc) trnI(gau)-trnA(ugc) 109699 110185 0 487 IRb 0.303226 94 177 58 4 no 1.000000 2 1.000000 NA 0.636550 72.700000 trnA(ugc) tRNA trnA(ugc) trnA(ugc) 110186 110258 1 73 IRb 0.013699 1 0 6 16 no 1.000000 2 1.000000 NA 1.000000 45.800000 IGS_068 igs trnA(ugc)|rrl trnA(ugc)-rrl 110259 110632 0 374 IRb 0.408163 100 129 68 64 no 1.000000 2 1.000000 NA 0.655080 75.400000 rrl_part1 rRNA rrl rrl 110633 111892 1 1260 IRb 0.040000 46 110 6 6 no 1.000000 2 1.000000 NA 0.912698 70.600000 rrl_part2 rRNA rrl rrl 115050 116538 1 1489 IRb 0.044921 65 42 9 3 no 1.000000 2 1.000000 NA 0.971793 72.400000 IGS_071 igs rrl|rrl rrl-rrl 116539 117542 0 1004 IRb 0.384534 363 60 2 300 no 1.000000 2 1.000000 NA 0.940239 83.500000 rrl_part3 rRNA rrl rrl 117543 117686 1 144 IRb 0.000000 0 0 12 300 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_072 igs rrl|rrl rrl-rrl 117687 117992 0 306 IRb NA 0 306 156 178 no 1.000000 2 1.000000 NA 0.000000 36.800000 rrl_part4 rRNA rrl rrl 117993 118430 1 438 IRb 0.006803 2 144 300 16 no 1.000000 2 1.000000 NA 0.671233 42.200000 IGS_073 igs rrl|rrf rrl-rrf 118431 118663 0 233 IRb 0.325359 68 24 202 179 yes 1.000000 2 1.000000 NA 0.896996 89.300000 rrf rRNA rrf rrf 118664 118787 1 124 IRb 0.000000 0 0 37 55 no 0.000000 1 0.000000 NA 1.000000 21.500000 IGS_074 igs rrf|trnS(gcu) rrf-trnS(gcu) 118788 119536 0 749 IRb 0.217557 114 225 161 116 yes 1.000000 2 1.000000 NA 0.699599 85.300000 trnS(gcu) tRNA trnS(gcu) trnS(gcu) 119537 119625 1 89 IRb 0.000000 0 0 11 27 no 0.000000 1 0.000000 NA 1.000000 19.600000 IGS_075 igs trnS(gcu)|DR496_pgp065 trnS(gcu)-DR496_pgp065 119626 119859 0 234 IRb 0.239316 56 0 100 0 no 1.000000 2 1.000000 NA 1.000000 72.500000 DR496_pgp065 gene DR496_pgp065 DR496_pgp065 119860 120192 1 333 IRb 0.323171 106 5 4 15 no 1.000000 2 1.000000 NA 0.984985 74.900000 IGS_076 igs DR496_pgp065|rpl23 DR496_pgp065-rpl23 120193 120548 0 356 SSC 0.163333 49 56 6 39 no 1.000000 2 1.000000 NA 0.842697 75.900000 rpl23 gene rpl23 rpl23 120549 120968 1 420 SSC 0.026190 11 0 6 5 no 1.000000 2 1.000000 NA 1.000000 55.400000 IGS_077 igs rpl23|rpl2 rpl23-rpl2 120969 121728 0 760 SSC 0.175617 121 71 22 20 yes 1.000000 2 1.000000 NA 0.906579 83.900000 rpl2 gene rpl2 rpl2 121729 122574 1 846 SSC 0.045564 38 12 13 7 no 1.000000 2 1.000000 NA 0.985816 71.800000 IGS_078 igs rpl2|rps19 rpl2-rps19 122575 123422 0 848 SSC 0.251989 190 94 60 5 no 1.000000 2 1.000000 NA 0.889151 82.300000 rps19 gene rps19 rps19 123423 123707 1 285 SSC 0.035211 10 1 26 9 no 1.000000 2 1.000000 NA 0.996491 58.700000 IGS_079 igs rps19|rps14 rps19-rps14 123708 125090 0 1383 SSC 0.147059 130 499 36 42 no 1.000000 2 1.000000 NA 0.639190 76.800000 rps14 gene rps14 rps14 125091 125363 1 273 SSC 0.029304 8 0 19 13 no 1.000000 2 1.000000 NA 1.000000 55.300000 IGS_080 igs rps14|trnG(ucc) rps14-trnG(ucc) 125364 126942 0 1579 SSC 0.133768 164 353 4 75 no 1.000000 2 1.000000 NA 0.776441 78.800000 trnG(ucc) tRNA trnG(ucc) trnG(ucc) 126943 127015 1 73 SSC 0.000000 0 0 12 2 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_081 igs trnG(ucc)|atpA trnG(ucc)-atpA 127016 127735 0 720 SSC 0.290076 152 196 85 62 no 1.000000 2 1.000000 NA 0.727778 82.000000 atpA gene atpA atpA 127736 129259 1 1524 SSC 0.024934 38 0 22 84 no 1.000000 2 1.000000 NA 1.000000 59.700000 IGS_082 igs atpA|psbI atpA-psbI 129260 129515 0 256 SSC 0.094972 17 77 99 83 no 1.000000 2 1.000000 NA 0.699219 72.300000 psbI gene psbI psbI 129516 129632 1 117 SSC 0.017094 2 0 48 1 no 1.000000 2 1.000000 NA 1.000000 47.400000 IGS_083 igs psbI|cemA psbI-cemA 129633 131018 0 1386 SSC 0.203297 185 476 9 26 no 1.000000 2 1.000000 NA 0.656566 76.000000 cemA gene cemA cemA 131019 132506 1 1488 SSC 0.064471 92 61 1 7 no 1.000000 2 1.000000 NA 0.959005 78.000000 IGS_084 igs cemA|rpl12 cemA-rpl12 132507 133357 0 851 SSC 0.182250 115 220 27 21 no 1.000000 2 1.000000 NA 0.741481 79.300000 rpl12 gene rpl12 rpl12 133358 133753 1 396 SSC 0.040404 16 0 32 0 no 1.000000 2 1.000000 NA 1.000000 62.700000 IGS_085 igs rpl12|trnF(gaa) rpl12-trnF(gaa) 133754 134016 0 263 SSC 0.154472 38 17 12 78 no 1.000000 2 1.000000 NA 0.935361 77.800000 trnF(gaa) tRNA trnF(gaa) trnF(gaa) 134017 134088 1 72 SSC 0.000000 0 0 6 6 no 0.000000 1 0.000000 NA 1.000000 19.200000 IGS_086 igs trnF(gaa)|trnE(uuc) trnF(gaa)-trnE(uuc) 134089 135720 0 1632 SSC 0.087241 80 715 78 103 no 1.000000 2 1.000000 NA 0.561887 72.500000 trnE(uuc) tRNA trnE(uuc) trnE(uuc) 135721 135793 1 73 SSC 0.000000 0 0 7 30 no 0.000000 1 0.000000 NA 1.000000 19.300000 IGS_087 igs trnE(uuc)|psaB trnE(uuc)-psaB 135794 137628 0 1835 SSC 0.121329 157 541 80 56 no 1.000000 2 1.000000 NA 0.705177 78.400000 psaB gene psaB psaB 137629 140487 1 2859 SSC 0.118614 332 60 33 5 no 1.000000 2 1.000000 NA 0.979014 78.300000 IGS_088 igs psaB|ccsA psaB-ccsA 140488 142065 0 1578 SSC 0.195076 206 522 81 32 no 1.000000 2 1.000000 NA 0.669202 77.900000 ccsA gene ccsA ccsA 142066 143193 1 1128 SSC 0.044762 47 78 34 3 no 1.000000 2 1.000000 NA 0.930851 73.600000 IGS_089 igs ccsA|psbZ ccsA-psbZ 143194 144619 0 1426 SSC 0.194885 221 292 3 197 no 1.000000 2 1.000000 NA 0.795231 79.500000 psbZ gene psbZ psbZ 144620 144808 1 189 SSC 0.000000 0 0 97 8 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_090 igs psbZ|psbM psbZ-psbM 144809 145324 0 516 SSC 0.083499 42 13 286 29 no 1.000000 2 1.000000 NA 0.974806 79.300000 psbM gene psbM psbM 145325 145432 1 108 SSC 0.009259 1 0 30 26 no 1.000000 2 1.000000 NA 1.000000 44.800000 IGS_091 igs psbM|trnR(acg) psbM-trnR(acg) 145433 146517 0 1085 SSC 0.295181 245 255 78 57 yes 1.000000 2 1.000000 NA 0.764977 82.700000 trnR(acg) tRNA trnR(acg) trnR(acg) 146518 146591 1 74 SSC 0.013514 1 0 4 6 no 1.000000 2 1.000000 NA 1.000000 45.600000 IGS_092 igs trnR(acg)|trnP(ugg) trnR(acg)-trnP(ugg) 146592 147067 0 476 SSC 0.250000 119 0 16 75 no 1.000000 2 1.000000 NA 1.000000 77.400000 trnP(ugg) tRNA trnP(ugg) trnP(ugg) 147068 147141 1 74 SSC 0.000000 0 0 2 1 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_093 igs trnP(ugg)|atpB trnP(ugg)-atpB 147142 147516 0 375 SSC 0.111111 41 6 76 65 no 1.000000 2 1.000000 NA 0.984000 80.500000 atpB gene atpB atpB 147517 148962 1 1446 SSC 0.037344 54 0 31 0 no 1.000000 2 1.000000 NA 1.000000 65.200000 IGS_094 igs atpB|DR496_pgp051 atpB-DR496_pgp051 148963 149875 0 913 SSC 0.270909 149 363 24 7 no 1.000000 2 1.000000 NA 0.602410 74.300000 DR496_pgp051 gene DR496_pgp051 DR496_pgp051 149876 150262 1 387 SSC 0.427609 127 90 3 0 no 1.000000 2 1.000000 NA 0.767442 74.000000 IGS_095 igs DR496_pgp051|tufA DR496_pgp051-tufA 150263 150444 0 182 SSC 0.100000 18 2 1 50 no 1.000000 2 1.000000 NA 0.989011 73.500000 tufA gene tufA tufA 150445 151701 1 1257 SSC 0.031026 39 0 73 3 no 1.000000 2 1.000000 NA 1.000000 61.800000 IGS_096 igs tufA|trnV(uac) tufA-trnV(uac) 151702 152405 0 704 SSC 0.273952 183 36 12 78 yes 1.000000 2 1.000000 NA 0.948864 84.500000 trnV(uac) tRNA trnV(uac) trnV(uac) 152406 152478 1 73 SSC 0.000000 0 0 2 5 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_097 igs trnV(uac)|trnQ(uug) trnV(uac)-trnQ(uug) 152479 152987 0 509 SSC 0.105140 45 81 75 75 no 1.000000 2 1.000000 NA 0.840864 82.800000 trnQ(uug) tRNA trnQ(uug) trnQ(uug) 152988 153059 1 72 SSC 0.000000 0 0 20 3 no 0.000000 1 0.000000 NA 1.000000 19.000000 IGS_098 igs trnQ(uug)|rpoC1 trnQ(uug)-rpoC1 153060 153538 0 479 SSC 0.234672 111 6 92 7 no 1.000000 2 1.000000 NA 0.987474 78.000000 rpoC1 gene rpoC1 rpoC1 153539 159049 1 5511 SSC 0.105021 525 512 43 6 no 1.000000 2 1.000000 NA 0.907095 76.000000 IGS_099 igs rpoC1|trnI(cau) rpoC1-trnI(cau) 159050 159793 0 744 SSC 0.338957 221 92 9 77 no 1.000000 2 1.000000 NA 0.876344 82.200000 trnI(cau) tRNA trnI(cau) trnI(cau) 159794 159866 -1 73 SSC 0.000000 0 0 2 4 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_100 igs trnI(cau)|petB trnI(cau)-petB 159867 160025 0 159 SSC 0.158228 25 1 75 38 no 1.000000 2 1.000000 NA 0.993711 76.000000 petB gene petB petB 160026 160673 -1 648 SSC 0.029321 19 0 40 41 no 1.000000 2 1.000000 NA 1.000000 63.600000 IGS_101 igs petB|DR496_pgp047 petB-DR496_pgp047 160674 160891 0 218 SSC 0.358696 66 34 32 10 no 1.000000 2 1.000000 NA 0.844037 75.100000 DR496_pgp047 gene DR496_pgp047 DR496_pgp047 160892 161230 1 339 SSC 0.374517 97 80 18 14 no 1.000000 2 1.000000 NA 0.764012 74.000000 IGS_102 igs DR496_pgp047|rps18 DR496_pgp047-rps18 161231 161430 0 200 SSC 0.256684 48 13 1 48 no 1.000000 2 1.000000 NA 0.935000 77.000000 rps18 gene rps18 rps18 161431 161856 -1 426 SSC 0.025822 11 0 17 53 no 1.000000 2 1.000000 NA 1.000000 56.200000 IGS_103 igs rps18|clpP rps18-clpP 161857 163365 0 1509 SSC 0.282411 342 298 41 96 no 1.000000 2 1.000000 NA 0.802518 82.500000 clpP gene clpP clpP 163366 165024 -1 1659 SSC 0.044794 74 7 25 16 no 1.000000 2 1.000000 NA 0.995781 70.800000 IGS_104 igs clpP|DR496_pgp044 clpP-DR496_pgp044 165025 165142 0 118 SSC 0.284404 31 9 158 0 no 1.000000 2 1.000000 NA 0.923729 76.600000 DR496_pgp044 gene DR496_pgp044 DR496_pgp044 165143 165451 1 309 SSC 0.379195 113 11 0 4 no 1.000000 2 1.000000 NA 0.964401 76.100000 IGS_105 igs DR496_pgp044|trnL(uag) DR496_pgp044-trnL(uag) 165452 165508 0 57 SSC 0.017857 1 1 20 31 no 1.000000 2 1.000000 NA 0.982456 50.900000 trnL(uag) tRNA trnL(uag) trnL(uag) 165509 165590 -1 82 SSC 0.012195 1 0 52 20 no 1.000000 2 1.000000 NA 1.000000 46.000000 IGS_106 igs trnL(uag)|rps4 trnL(uag)-rps4 165591 165951 0 361 SSC 0.204611 71 14 50 9 no 1.000000 2 1.000000 NA 0.961219 78.200000 rps4 gene rps4 rps4 165952 166713 -1 762 SSC 0.035433 27 0 8 23 no 1.000000 2 1.000000 NA 1.000000 64.700000 IGS_107 igs rps4|trnE(uuc) rps4-trnE(uuc) 166714 167169 0 456 SSC 0.307420 87 173 17 77 no 1.000000 2 1.000000 NA 0.620614 72.600000 trnE(uuc) tRNA trnE(uuc) trnE(uuc) 167170 167242 -1 73 SSC 0.000000 0 0 31 4 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_108 igs trnE(uuc)|trnW(cca) trnE(uuc)-trnW(cca) 167243 167556 0 314 SSC 0.149837 46 7 104 78 no 1.000000 2 1.000000 NA 0.977707 80.800000 trnW(cca) tRNA trnW(cca) trnW(cca) 167557 167629 1 73 SSC 0.000000 0 0 19 5 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_109 igs trnW(cca)|rpoA trnW(cca)-rpoA 167630 168548 0 919 SSC 0.296636 194 264 92 12 no 1.000000 2 1.000000 NA 0.711643 77.800000 rpoA gene rpoA rpoA 168549 170105 -1 1557 SSC 0.107542 154 125 5 15 no 1.000000 2 1.000000 NA 0.919717 82.900000 IGS_110 igs rpoA|trnMe(cau) rpoA-trnMe(cau) 170106 170397 0 292 SSC 0.201439 56 14 14 74 no 1.000000 2 1.000000 NA 0.952055 78.200000 trnMe(cau) tRNA trnMe(cau) trnMe(cau) 170398 170471 -1 74 SSC 0.000000 0 0 6 0 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_111 igs trnMe(cau)|trnR(ucu) trnMe(cau)-trnR(ucu) 170472 171018 0 547 SSC 0.245014 86 196 80 72 no 1.000000 2 1.000000 NA 0.641682 79.200000 trnR(ucu) tRNA trnR(ucu) trnR(ucu) 171019 171090 -1 72 SSC 0.000000 0 0 1 0 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_112 igs trnR(ucu)|petD trnR(ucu)-petD 171091 171290 0 200 SSC 0.103627 20 7 73 24 no 1.000000 2 1.000000 NA 0.965000 77.700000 petD gene petD petD 171291 171773 -1 483 SSC 0.074534 36 0 4 38 no 1.000000 2 1.000000 NA 1.000000 73.400000 IGS_113 igs petD|petA petD-petA 171774 173231 0 1458 SSC 0.264456 311 282 29 21 no 1.000000 2 1.000000 NA 0.806584 81.100000 petA gene petA petA 173232 174182 -1 951 SSC 0.037855 36 0 4 11 no 1.000000 2 1.000000 NA 1.000000 65.800000 IGS_114 igs petA|rpl36 petA-rpl36 174183 175339 0 1157 SSC 0.195780 167 304 50 51 no 1.000000 2 1.000000 NA 0.737252 81.400000 rpl36 gene rpl36 rpl36 175340 175453 -1 114 SSC 0.008772 1 0 0 60 no 1.000000 2 1.000000 NA 1.000000 42.500000 IGS_115 igs rpl36|DR496_pgp038 rpl36-DR496_pgp038 175454 175768 0 315 SSC 0.107884 26 74 62 233 no 1.000000 2 1.000000 NA 0.765079 74.900000 DR496_pgp038 gene DR496_pgp038 DR496_pgp038 175769 176128 1 360 SSC 0.363636 4 349 72 39 no 1.000000 2 1.000000 NA 0.030556 53.400000 IGS_116 igs DR496_pgp038|chlL DR496_pgp038-chlL 176129 176275 0 147 SSC 0.168317 17 46 122 39 no 1.000000 2 1.000000 NA 0.687075 72.900000 chlL gene chlL chlL 176276 177214 -1 939 SSC 0.030108 28 9 4 40 no 1.000000 2 1.000000 NA 0.990415 62.300000 IGS_117 igs chlL|DR496_pgp036 chlL-DR496_pgp036 177215 177502 0 288 SSC 0.281915 53 100 17 9 no 1.000000 2 1.000000 NA 0.652778 69.700000 DR496_pgp036 gene DR496_pgp036 DR496_pgp036 177503 178012 -1 510 SSC 0.340541 63 325 58 72 no 1.000000 2 1.000000 NA 0.362745 73.300000 IGS_118 igs DR496_pgp036|ycf3 DR496_pgp036-ycf3 178013 178099 0 87 SSC 0.062500 1 71 6 18 no 1.000000 2 1.000000 NA 0.183908 51.700000 ycf3 gene ycf3 ycf3 178100 178612 -1 513 SSC 0.029240 15 0 14 8 no 1.000000 2 1.000000 NA 1.000000 59.400000 IGS_119 igs ycf3|ycf4 ycf3-ycf4 178613 179671 0 1059 SSC 0.217808 159 329 20 15 no 1.000000 2 1.000000 NA 0.689330 77.400000 ycf4 gene ycf4 ycf4 179672 180259 -1 588 SSC 0.057823 34 0 12 6 no 1.000000 2 1.000000 NA 1.000000 73.700000 IGS_120 igs ycf4|rps9 ycf4-rps9 180260 181646 0 1387 SSC 0.232750 226 416 8 57 no 1.000000 2 1.000000 NA 0.700072 77.200000 rps9 gene rps9 rps9 181647 182180 -1 534 SSC 0.041916 21 33 7 18 no 1.000000 2 1.000000 NA 0.938202 71.200000 IGS_121 igs rps9|psbE rps9-psbE 182181 183076 0 896 SSC 0.288550 189 241 95 32 no 1.000000 2 1.000000 NA 0.731027 79.800000 psbE gene psbE psbE 183077 183325 -1 249 SSC 0.020080 5 0 23 9 no 1.000000 2 1.000000 NA 1.000000 49.700000 IGS_122 igs psbE|DR496_pgp031 psbE-DR496_pgp031 183326 183430 0 105 SSC 0.076923 8 1 14 14 no 1.000000 2 1.000000 NA 0.990476 71.500000 DR496_pgp031 gene DR496_pgp031 DR496_pgp031 183431 188740 -1 5310 SSC 0.144998 658 772 2 1 no 1.000000 2 1.000000 NA 0.854614 74.700000 IGS_123 igs DR496_pgp031|psaA DR496_pgp031-psaA 188741 189059 0 319 SSC 0.107570 27 68 38 93 no 1.000000 2 1.000000 NA 0.786834 74.100000 psaA_part1 gene psaA psaA 189060 189148 -1 89 SSC 0.000000 0 0 19 4 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_124 igs psaA|rps8 psaA-rps8 189149 189714 0 566 SSC 0.109504 53 82 108 12 no 1.000000 2 1.000000 NA 0.855124 80.300000 rps8 gene rps8 rps8 189715 190125 -1 411 SSC 0.029197 12 0 0 9 no 1.000000 2 1.000000 NA 1.000000 56.600000 IGS_125 igs rps8|rpl5 rps8-rpl5 190126 191015 0 890 SSC 0.327586 228 194 65 75 yes 1.000000 2 1.000000 NA 0.782022 83.700000 rpl5 gene rpl5 rpl5 191016 191558 -1 543 SSC 0.020295 11 1 10 9 no 1.000000 2 1.000000 NA 0.998158 55.100000 IGS_126 igs rpl5|rpl14 rpl5-rpl14 191559 192862 0 1304 SSC 0.264317 240 396 11 45 no 1.000000 2 1.000000 NA 0.696319 77.300000 rpl14 gene rpl14 rpl14 192863 193228 -1 366 SSC 0.038251 14 0 3 51 no 1.000000 2 1.000000 NA 1.000000 61.100000 IGS_127 igs rpl14|rpl16 rpl14-rpl16 193229 193296 0 68 SSC 0.014706 1 0 50 117 no 1.000000 2 1.000000 NA 1.000000 49.700000 rpl16 gene rpl16 rpl16 193297 193710 -1 414 SSC 0.038647 16 0 16 57 no 1.000000 2 1.000000 NA 1.000000 63.300000 IGS_128 igs rpl16|trnC(gca) rpl16-trnC(gca) 193711 193934 0 224 SSC 0.043478 9 17 53 74 no 1.000000 2 1.000000 NA 0.924107 70.200000 trnC(gca) tRNA trnC(gca) trnC(gca) 193935 194006 -1 72 SSC 0.000000 0 0 12 2 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_129 igs trnC(gca)|ycf1 trnC(gca)-ycf1 194007 194484 0 478 SSC 0.291759 131 29 84 3 no 1.000000 2 1.000000 NA 0.939331 81.000000 ycf1 gene ycf1 ycf1 194485 201390 -1 6906 SSC 0.073017 486 250 12 28 no 1.000000 2 1.000000 NA 0.963800 73.200000 IGS_130 igs ycf1|trnS(gcu) ycf1-trnS(gcu) 201391 202317 0 927 IRa 0.233179 201 65 194 100 yes 1.000000 2 1.000000 NA 0.929881 90.500000 trnS(gcu) tRNA trnS(gcu) trnS(gcu) 202318 202406 -1 89 IRa 0.000000 0 0 27 11 no 0.000000 1 0.000000 NA 1.000000 19.600000 IGS_131 igs trnS(gcu)|rrf trnS(gcu)-rrf 202407 203155 0 749 IRa 0.217557 114 225 116 161 yes 1.000000 2 1.000000 NA 0.699599 85.300000 rrf rRNA rrf rrf 203156 203279 -1 124 IRa 0.000000 0 0 55 37 no 0.000000 1 0.000000 NA 1.000000 21.500000 IGS_132 igs rrf|rrl rrf-rrl 203280 203512 0 233 IRa 0.325359 68 24 179 202 yes 1.000000 2 1.000000 NA 0.896996 89.300000 rrl_part4 rRNA rrl rrl 203513 203950 -1 438 IRa 0.006803 2 144 16 300 no 1.000000 2 1.000000 NA 0.671233 42.200000 rrl_part3 rRNA rrl rrl 204257 204400 -1 144 IRa 0.000000 0 0 300 12 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_135 igs rrl|rrl rrl-rrl 204401 205404 0 1004 IRa 0.384534 363 60 300 2 no 1.000000 2 1.000000 NA 0.940239 83.500000 rrl_part2 rRNA rrl rrl 205405 206893 -1 1489 IRa 0.044921 65 42 3 9 no 1.000000 2 1.000000 NA 0.971793 72.400000 IGS_136 igs rrl|rrl rrl-rrl 206894 210050 0 3157 IRa 0.327838 517 1580 46 31 no 1.000000 2 1.000000 NA 0.499525 71.400000 rrl_part1 rRNA rrl rrl 210051 211310 -1 1260 IRa 0.040000 46 110 6 6 no 1.000000 2 1.000000 NA 0.912698 70.600000 IGS_137 igs rrl|trnA(ugc) rrl-trnA(ugc) 211311 211684 0 374 IRa 0.408163 100 129 64 68 no 1.000000 2 1.000000 NA 0.655080 75.400000 trnA(ugc) tRNA trnA(ugc) trnA(ugc) 211685 211757 -1 73 IRa 0.013699 1 0 16 6 no 1.000000 2 1.000000 NA 1.000000 45.800000 IGS_138 igs trnA(ugc)|trnI(gau) trnA(ugc)-trnI(gau) 211758 212244 0 487 IRa 0.303226 94 177 4 58 no 1.000000 2 1.000000 NA 0.636550 72.700000 trnI(gau) tRNA trnI(gau) trnI(gau) 212245 212318 -1 74 IRa 0.013514 1 0 14 3 no 1.000000 2 1.000000 NA 1.000000 45.500000 IGS_139 igs trnI(gau)|DR496_pgp025 trnI(gau)-DR496_pgp025 212319 212865 0 547 IRa 0.142857 30 337 15 300 no 1.000000 2 1.000000 NA 0.383912 65.400000 DR496_pgp025 gene DR496_pgp025 DR496_pgp025 212866 213345 1 480 IRa NA 0 480 181 300 no 1.000000 2 1.000000 NA 0.000000 42.300000 IGS_140 igs DR496_pgp025|rrs DR496_pgp025-rrs 213346 213652 0 307 IRa 0.000000 0 305 300 6 no 1.000000 2 1.000000 NA 0.006515 25.700000 rrs rRNA rrs rrs 213653 215180 -1 1528 IRa 0.026918 40 42 300 43 no 1.000000 2 1.000000 NA 0.972513 65.000000 IGS_141 igs rrs|DR496_pgp024 rrs-DR496_pgp024 215181 215498 0 318 IRa 0.172932 46 52 73 1 no 1.000000 2 1.000000 NA 0.836478 74.600000 DR496_pgp024 gene DR496_pgp024 DR496_pgp024 215499 215879 -1 381 IRa 0.434505 136 68 0 1 no 1.000000 2 1.000000 NA 0.821522 75.400000 IGS_142 igs DR496_pgp024|DR496_pgp023 DR496_pgp024-DR496_pgp023 215880 216284 0 405 IRa 0.450928 170 28 2 2 yes 1.000000 2 1.000000 NA 0.930864 79.100000 DR496_pgp023 gene DR496_pgp023 DR496_pgp023 216285 217100 1 816 IRa 0.382239 198 298 0 0 no 1.000000 2 1.000000 NA 0.634804 74.700000 IGS_143 igs DR496_pgp023|DR496_pgp022 DR496_pgp023-DR496_pgp022 217101 217504 0 404 IRa 0.402174 148 36 2 0 no 1.000000 2 1.000000 NA 0.910891 78.400000 DR496_pgp022 gene DR496_pgp022 DR496_pgp022 217505 218281 -1 777 IRa 0.373259 268 59 1 1 yes 1.000000 2 1.000000 NA 0.924067 82.900000 IGS_144 igs DR496_pgp022|DR496_pgp021 DR496_pgp022-DR496_pgp021 218282 218563 0 282 IRa 0.424908 116 9 1 0 yes 1.000000 2 1.000000 NA 0.968085 75.600000 DR496_pgp021 gene DR496_pgp021 DR496_pgp021 218564 218911 1 348 IRa 0.399371 127 30 3 166 no 1.000000 2 1.000000 NA 0.913793 77.600000 IGS_145 igs DR496_pgp021|atpH DR496_pgp021-atpH 218912 218985 0 74 IRa 0.000000 0 0 12 92 no 0.000000 1 0.000000 NA 1.000000 19.700000 atpH gene atpH atpH 218986 219234 1 249 IRa 0.044177 11 0 86 11 no 1.000000 2 1.000000 NA 1.000000 63.700000 IGS_146 igs atpH|DR496_pgp019 atpH-DR496_pgp019 219235 219364 0 130 IRa 0.333333 21 67 18 0 no 1.000000 2 1.000000 NA 0.484615 66.100000 DR496_pgp019 gene DR496_pgp019 DR496_pgp019 219365 219844 1 480 IRa 0.386760 111 193 2 27 no 1.000000 2 1.000000 NA 0.597917 71.400000 IGS_147 igs DR496_pgp019|psbC DR496_pgp019-psbC 219845 1041 0 1114 LSC 0.219158 151 425 4 125 no 1.000000 2 1.000000 NA 0.618492 74.600000