primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 CATTGAGTTAGCAACCCGGA TCTTGAAAAGGGGGCTCAAC 20 20 50.0 50.0 57.9 58.0 0.7 0.0 0.112574 3916 4465 663-670 1.000000 84.7 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 ACCATTGAGTTAGCAACCCG TCTTGAAAAGGGGGCTCAAC 20 20 50.0 50.0 58.2 58.0 0.0 0.0 0.183407 3916 4465 665-672 1.000000 84.2 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 CATTGAGTTAGCAACCCGGA GAAAAGGGGGCTCAACCTAC 20 20 50.0 55.0 57.9 58.2 0.7 0.0 0.272456 3916 4465 659-666 1.000000 83.5 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 CATTGAGTTAGCAACCCGGA GGGGCTCAACCTACAAGAAC 20 20 50.0 55.0 57.9 58.2 0.7 0.0 0.285444 3916 4465 653-660 1.000000 83.5 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 ACCATTGAGTTAGCAACCCG GAAAAGGGGGCTCAACCTAC 20 20 50.0 55.0 58.2 58.2 0.0 0.0 0.343289 3916 4465 661-668 1.000000 82.9 trnY-GUA-trnD-GUC_p1 trnY-GUA-trnD-GUC 1 AATTCTTCCTGGGTCGATGC CGGTGCTCTGACCAATTGAA 20 20 50.0 50.0 58.0 58.5 0.0 7.1 0.521454 16587 16955 482-493 1.000000 84.5 trnY-GUA-trnD-GUC_p2 trnY-GUA-trnD-GUC 2 GGGGACGGACTGTAAATTCG CGGTGCTCTGACCAATTGAA 20 20 55.0 50.0 58.4 58.5 0.0 7.1 0.828828 16587 16955 449-460 1.000000 82.6 trnY-GUA-trnD-GUC_p3 trnY-GUA-trnD-GUC 3 GGGACGGACTGTAAATTCGT CGGTGCTCTGACCAATTGAA 20 20 50.0 50.0 57.6 58.5 0.0 7.1 0.852505 16587 16955 448-459 1.000000 82.5 trnY-GUA-trnD-GUC_p4 trnY-GUA-trnD-GUC 4 AATTCTTCCTGGGTCGATGC GGTGCTCTGACCAATTGAAC 20 20 50.0 50.0 58.0 57.0 0.0 7.1 1.041608 16587 16955 481-492 1.000000 80.3 trnY-GUA-trnD-GUC_p5 trnY-GUA-trnD-GUC 5 TGGGGACGGACTGTAAATTC CGGTGCTCTGACCAATTGAA 20 20 50.0 50.0 57.2 58.5 0.0 7.1 1.251324 16587 16955 450-461 1.000000 79.2 trnD-GUC-psbM_p1 trnD-GUC-psbM 1 TTCAATTGGTCAGAGCACCG TCATTTTGGCTGGCTGTTTT 20 20 50.0 40.0 58.5 56.7 5.4 2.0 1.775052 17030 18107 773-1249 1.000000 75.3 trnD-GUC-psbM_p2 trnD-GUC-psbM 2 TTCAATTGGTCAGAGCACCG AATCATTTTGGCTGGCTGTT 20 20 50.0 40.0 58.5 56.5 5.4 2.0 2.006868 17030 18107 775-1251 1.000000 73.5 trnD-GUC-psbM_p3 trnD-GUC-psbM 3 TTCAATTGGTCAGAGCACCG ATCATTTTGGCTGGCTGTTT 20 20 50.0 40.0 58.5 56.5 5.4 2.0 2.006868 17030 18107 774-1250 1.000000 73.5 trnD-GUC-psbM_p4 trnD-GUC-psbM 4 TTCAATTGGTCAGAGCACCG TCATTTTGGCTGGCTGTTTTT 20 21 50.0 38.1 58.5 57.4 5.4 2.0 2.034560 17030 18107 773-1249 1.000000 73.3 trnD-GUC-psbM_p5 trnD-GUC-psbM 5 TTCAATTGGTCAGAGCACCG TTTGGCTGGCTGTTTTTACA 20 20 50.0 40.0 58.5 56.3 5.4 2.0 2.128044 17030 18107 769-1245 1.000000 72.5 psbM-petN_p1 psbM-petN 1 AAAACAGCCAGCCAAAATGA TAGTAAGTCTCGCTTGGGCT 20 20 40.0 50.0 56.7 58.2 0.0 0.0 1.449068 18213 19031 881-929 1.000000 78.2 psbM-petN_p2 psbM-petN 2 AAAACAGCCAGCCAAAATGA GGCTGCTTTAATGGTGGTCT 20 20 40.0 50.0 56.7 58.2 0.0 0.0 1.458296 18213 19031 865-913 1.000000 78.2 psbM-petN_p3 psbM-petN 3 AAAACAGCCAGCCAAAATGA GTAGTATGGGGGAGGAGTGG 20 20 40.0 60.0 56.7 58.3 0.0 0.0 1.579440 18213 19031 825-873 1.000000 77.5 psbM-petN_p4 psbM-petN 4 AACAGCCAGCCAAAATGATT TAGTAAGTCTCGCTTGGGCT 20 20 40.0 50.0 56.5 58.2 0.0 0.0 1.680884 18213 19031 879-927 1.000000 76.3 psbM-petN_p5 psbM-petN 5 AAAACAGCCAGCCAAAATGA TAGTATGGGGGAGGAGTGGA 20 20 40.0 55.0 56.7 58.4 0.0 0.0 1.669873 18213 19031 824-872 0.956522 74.7 trnC-GCA-rpoB_p1 trnC-GCA-rpoB 1 AAAGGATTTGCAGTCCCCTG CCGGGTATTGTGGACATTCC 20 20 50.0 55.0 58.1 58.3 14.6 0.0 0.395580 20123 21346 1264-1325 1.000000 87.4 trnC-GCA-rpoB_p2 trnC-GCA-rpoB 2 AAAGGATTTGCAGTCCCCTG CGGGTATTGTGGACATTCCC 20 20 50.0 55.0 58.1 58.3 14.6 0.0 0.395580 20123 21346 1263-1324 1.000000 87.4 trnC-GCA-rpoB_p3 trnC-GCA-rpoB 3 AAAGGATTTGCAGTCCCCTG AGTTCTTCTGCCAAGCCTTG 20 20 50.0 50.0 58.1 58.4 14.6 0.0 0.457296 20123 21346 1327-1388 1.000000 86.9 trnC-GCA-rpoB_p4 trnC-GCA-rpoB 4 AAAGGATTTGCAGTCCCCTG AAGTTCTTCTGCCAAGCCTT 20 20 50.0 45.0 58.1 57.6 14.6 0.0 0.442790 20123 21346 1328-1387 0.956522 84.9 trnC-GCA-rpoB_p5 trnC-GCA-rpoB 5 AAAGGATTTGCAGTCCCCTG CAAGTTCTTCTGCCAAGCCT 20 20 50.0 50.0 58.1 58.4 14.6 0.0 0.457296 20123 21346 1329-1388 0.956522 84.7 ycf3-trnS-GGA_p1 ycf3-trnS-GGA 1 TTGGCTACAATCGAGGAGGT TTCCAATGCTACGCCTTGAA 20 20 50.0 45.0 58.4 57.8 0.0 5.6 0.624160 45729 46332 681-728 1.000000 82.1 ycf3-trnS-GGA_p2 ycf3-trnS-GGA 2 TTGGCTACAATCGAGGAGGT ACGGAAAGAGAGGGATTCGA 20 20 50.0 50.0 58.4 58.2 0.0 0.0 0.582844 45729 46332 731-778 1.000000 81.9 ycf3-trnS-GGA_p3 ycf3-trnS-GGA 3 GGCTACAATCGAGGAGGTCT TTCCAATGCTACGCCTTGAA 20 20 55.0 45.0 58.6 57.8 0.0 5.6 0.787821 45729 46332 679-726 1.000000 80.8 ycf3-trnS-GGA_p4 ycf3-trnS-GGA 4 GGCTACAATCGAGGAGGTCT ACGGAAAGAGAGGGATTCGA 20 20 55.0 50.0 58.6 58.2 0.0 0.0 0.746506 45729 46332 729-776 1.000000 80.6 ycf3-trnS-GGA_p5 ycf3-trnS-GGA 5 TTGGCTACAATCGAGGAGGT AGTTCCAATGCTACGCCTTG 20 20 50.0 50.0 58.4 58.5 0.0 0.0 0.978341 45729 46332 683-730 1.000000 79.2 rbcL-psaI_p1 rbcL-psaI 1 GGCTTCAGGGGGTATTCATG CCATTGCAATTGCCGGAAAT 20 20 55.0 45.0 58.0 58.0 0.0 26.9 0.040121 57935 58876 1273-1353 1.000000 89.7 rbcL-psaI_p2 rbcL-psaI 2 TCTCATTATTGCCGCGACAA CCATTGCAATTGCCGGAAAT 20 20 45.0 45.0 58.0 58.0 11.0 26.9 0.044141 57935 58876 1563-1643 1.000000 89.0 rbcL-psaI_p3 rbcL-psaI 3 TTGTCTCATTATTGCCGCGA CCATTGCAATTGCCGGAAAT 20 20 45.0 45.0 58.0 58.0 8.2 26.9 0.044141 57935 58876 1566-1646 1.000000 88.9 rbcL-psaI_p4 rbcL-psaI 4 GGCTTCAGGGGGTATTCATG AATCGGTCATAACCACTGCC 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.051504 57935 58876 1941-2027 0.956522 87.0 rbcL-psaI_p5 rbcL-psaI 5 TCTCATTATTGCCGCGACAA AATCGGTCATAACCACTGCC 20 20 45.0 50.0 58.0 58.0 11.0 0.0 0.055525 57935 58876 2231-2317 0.956522 86.5 trnI-CAU-trnL-CAA_p1 trnI-CAU-trnL-CAA 1 TCTCAGACAGTAGTGCCACA TGAAACGTGGCGATGATGAT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.027388 87091 87210 1129-1129 0.173913 57.9 trnI-CAU-trnL-CAA_p2 trnI-CAU-trnL-CAA 2 AGTCTCCCCTCTCTCCCTTA TGAAACGTGGCGATGATGAT 20 20 55.0 45.0 58.0 58.0 0.0 0.0 0.026012 87091 87210 428-428 0.173913 57.4 trnI-CAU-trnL-CAA_p3 trnI-CAU-trnL-CAA 3 AGTCTCCCCTCTCTCCCTTA CTGAGACGAAGAGAAAGGGC 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.006444 87091 87210 763-763 0.130435 45.2 trnI-CAU-trnL-CAA_p4 trnI-CAU-trnL-CAA 4 TCTCAGACAGTAGTGCCACA CTGAGACGAAGAGAAAGGGC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.007820 87091 87210 1464-1464 0.130435 45.2 trnI-CAU-trnL-CAA_p5 trnI-CAU-trnL-CAA 5 CGCTACGGATATCCTTCAGC CTGAGACGAAGAGAAAGGGC 20 20 55.0 55.0 58.0 58.0 19.6 0.0 0.019224 87091 87210 918-918 0.130435 45.1 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 ATGGGGGCTTATCCTATCCC TCCTAAGAGCAGCGTGTCTA 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.137198 108472 109007 972-1002 0.826087 81.9 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 ATGGGGGCTTATCCTATCCC AGCAGCGTGTCTACCAATTT 20 20 55.0 45.0 58.0 57.8 0.0 0.0 0.197925 108472 109007 965-995 0.826087 81.5 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 ATGGGGGCTTATCCTATCCC ATGTCCCGAAGAAACCCAAC 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.107283 108472 109007 1285-1315 0.826087 80.4 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 ATGGGGGCTTATCCTATCCC CCGAAGAAACCCAACGAGAA 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.139223 108472 109007 1280-1310 0.826087 80.2 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 ATGGGGGCTTATCCTATCCC GCAGATAATAAGGAGCCGCA 20 20 55.0 50.0 58.0 57.8 0.0 0.0 0.182753 108472 109007 1563-1593 0.826087 78.7 ccsA-ndhD_p1 ccsA-ndhD 1 AGGTTTACATAGTTATGGTTCA CTCTCGCTATCCGTTGACAG 22 20 31.8 55.0 52.5 57.9 4.3 0.0 7.597928 110134 110324 286-295 1.000000 51.0 ccsA-ndhD_p2 ccsA-ndhD 2 AGGTTTACATAGTTATGGTTCA TCTCTCGCTATCCGTTGACA 22 20 31.8 50.0 52.5 58.3 4.3 0.0 7.738984 110134 110324 287-296 1.000000 51.0 ccsA-ndhD_p3 ccsA-ndhD 3 AGGAATAGGTTTACATAGTTATGGT CTCTCGCTATCCGTTGACAG 25 20 32.0 55.0 55.3 57.9 4.3 0.0 7.838974 110134 110324 292-301 1.000000 51.0 ccsA-ndhD_p4 ccsA-ndhD 4 AGGTTTACATAGTTATGGTTCAT CTCTCGCTATCCGTTGACAG 23 20 30.4 55.0 53.2 57.9 4.3 0.0 7.942467 110134 110324 286-295 1.000000 51.0 ccsA-ndhD_p5 ccsA-ndhD 5 AGGTTTACATAGTTATGGTTCA CCGTTGACAGGGTAGAGACT 22 20 31.8 55.0 52.5 58.5 4.3 0.0 7.938493 110134 110324 276-281 0.956522 48.9 ndhG-ndhI_p1 ndhG-ndhI 1 CCCAGCGAAAAGGCAGAATA TTGAGCCGGTTACCAATCTC 20 20 50.0 50.0 58.2 57.6 0.0 1.9 0.646397 113734 113931 375-437 1.000000 83.1 ndhG-ndhI_p2 ndhG-ndhI 2 CCCAGCGAAAAGGCAGAATA AGCCGGTTACCAATCTCCAT 20 20 50.0 50.0 58.2 58.8 0.0 1.9 1.036511 113734 113931 372-434 1.000000 80.0 ndhG-ndhI_p3 ndhG-ndhI 3 CCCAGCGAAAAGGCAGAATA GCCGGTTACCAATCTCCATA 20 20 50.0 50.0 58.2 57.1 0.0 1.9 1.172547 113734 113931 371-433 1.000000 78.9 ndhG-ndhI_p4 ndhG-ndhI 4 CCCAGCGAAAAGGCAGAATA GCCGGTTACCAATCTCCATAA 20 21 50.0 47.6 58.2 57.8 0.0 1.9 1.452636 113734 113931 371-433 1.000000 76.7 ndhG-ndhI_p5 ndhG-ndhI 5 CCCAGCGAAAAGGCAGAATA AGCCGGTTACCAATCTCCA 20 19 50.0 52.6 58.2 58.3 0.0 1.9 1.558144 113734 113931 372-434 1.000000 75.8 trnL-CAA-trnI-CAU_p1 trnL-CAA-trnI-CAU 1 TGAAACGTGGCGATGATGAT AGTCTCCCCTCTCTCCCTTA 20 20 45.0 55.0 58.0 58.0 0.0 0.0 0.026012 135862 135981 428-428 0.173913 56.6 trnL-CAA-trnI-CAU_p2 trnL-CAA-trnI-CAU 2 CTGAGACGAAGAGAAAGGGC AGTCTCCCCTCTCTCCCTTA 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.006444 135862 135981 763-763 0.130435 45.2 trnL-CAA-trnI-CAU_p3 trnL-CAA-trnI-CAU 3 CTGAGACGAAGAGAAAGGGC CGCTACGGATATCCTTCAGC 20 20 55.0 55.0 58.0 58.0 0.0 19.6 0.019224 135862 135981 918-918 0.130435 45.1 trnL-CAA-trnI-CAU_p4 trnL-CAA-trnI-CAU 4 CTGAGACGAAGAGAAAGGGC TAGAGATGGACTACGGGCAG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.020536 135862 135981 661-661 0.130435 45.1 trnL-CAA-trnI-CAU_p5 trnL-CAA-trnI-CAU 5 CTGAGACGAAGAGAAAGGGC TTTCGCTAGCTCACATGCAT 20 20 55.0 45.0 58.0 58.0 0.0 13.9 0.031616 135862 135981 953-953 0.130435 45.0