feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH tRNA trnH trnH 1 74 -1 74 LSC 0.000000 0 0 39 3 no 0.000000 1 0.000000 NA 1.000000 19.000000 IGS_001 igs trnH|psbA trnH-psbA 75 405 0 331 LSC 0.054711 18 2 113 90 yes 1.000000 2 1.000000 NA 0.993958 74.800000 psbA gene psbA psbA 406 1467 -1 1062 LSC 0.002825 3 0 56 44 no 1.000000 2 1.000000 NA 1.000000 48.700000 IGS_002 igs psbA|matK psbA-matK 1468 2027 0 560 LSC 0.053667 30 1 116 12 yes 1.000000 2 1.000000 NA 0.998214 73.200000 matK gene matK matK 2028 3542 -1 1515 LSC 0.021122 32 0 3 92 no 1.000000 2 1.000000 NA 1.000000 56.100000 IGS_003 igs matK|rps16 matK-rps16 3543 4961 0 1419 LSC 0.035336 50 4 17 6 yes 1.000000 2 1.000000 NA 0.997181 64.800000 rps16 gene rps16 rps16 4962 6069 -1 1108 LSC 0.024523 27 7 3 110 no 1.000000 2 1.000000 NA 0.993682 58.700000 IGS_004 igs rps16|trnQ-UUG rps16-trnQ-UUG 6070 7012 0 943 LSC 0.026490 20 188 79 76 no 1.000000 2 1.000000 NA 0.800636 64.700000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 7013 7084 1 72 LSC 0.000000 0 0 95 4 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_005 igs trnQ-UUG|psbK trnQ-UUG-psbK 7085 7444 0 360 LSC 0.028090 10 4 167 54 no 1.000000 2 1.000000 NA 0.988889 60.000000 psbK gene psbK psbK 7445 7624 1 180 LSC 0.016667 3 0 1 6 no 1.000000 2 1.000000 NA 1.000000 47.200000 IGS_006 igs psbK|psbI psbK-psbI 7625 8057 0 433 LSC 0.038369 16 16 63 20 no 1.000000 2 1.000000 NA 0.963048 67.200000 psbI gene psbI psbI 8058 8168 1 111 LSC 0.027027 3 0 31 7 no 1.000000 2 1.000000 NA 1.000000 53.600000 IGS_007 igs psbI|trnS-GCU psbI-trnS-GCU 8169 8306 0 138 LSC 0.036232 5 0 9 32 no 1.000000 2 1.000000 NA 1.000000 59.000000 trnS-GCU tRNA trnS-GCU trnS-GCU 8307 8394 1 88 LSC 0.011364 1 0 43 0 no 1.000000 2 1.000000 NA 1.000000 44.000000 IGS_008 igs trnS-GCU|psbM trnS-GCU-psbM 8395 10778 0 2384 LSC 0.163732 344 283 55 145 yes 1.000000 2 1.000000 NA 0.881292 83.900000 psbM gene psbM psbM 10779 10883 -1 105 LSC 0.000000 0 0 37 40 no 0.000000 1 0.000000 NA 1.000000 21.500000 IGS_009 igs psbM|rpoB psbM-rpoB 10884 12900 0 2017 LSC 0.187639 337 221 142 152 yes 1.000000 2 1.000000 NA 0.890431 91.500000 rpoB gene rpoB rpoB 12901 16081 -1 3181 LSC 0.006602 21 0 6 7 no 1.000000 2 1.000000 NA 1.000000 44.600000 IGS_010 igs rpoB|rpoC1 rpoB-rpoC1 16082 16086 0 5 LSC 0.000000 0 0 207 2 no 0.000000 1 0.000000 NA 1.000000 18.900000 rpoC1 gene rpoC1 rpoC1 16087 18913 1 2827 LSC 0.007818 22 13 212 9 no 1.000000 2 1.000000 NA 0.995401 46.600000 IGS_011 igs rpoC1|rps2 rpoC1-rps2 18914 23451 0 4538 LSC 0.012179 55 22 19 300 no 1.000000 2 1.000000 NA 0.995152 47.100000 rps2 gene rps2 rps2 23452 24162 1 711 LSC 0.007032 5 0 163 223 no 1.000000 2 1.000000 NA 1.000000 60.000000 IGS_012 igs rps2|atpl rps2-atpl 24163 24376 0 214 LSC 0.000000 0 0 135 9 no 0.000000 1 0.000000 NA 1.000000 19.400000 atpl gene atpl atpl 24377 25120 1 744 LSC 0.009409 7 0 300 13 no 1.000000 2 1.000000 NA 1.000000 50.100000 IGS_013 igs atpl|atpH atpl-atpH 25121 26276 0 1156 LSC 0.032035 37 1 115 265 yes 1.000000 2 1.000000 NA 0.999135 70.900000 atpH gene atpH atpH 26277 26522 1 246 LSC 0.000000 0 0 98 19 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_014 igs atpH|atpF atpH-atpF 26523 27720 0 1198 LSC 0.020033 24 0 300 83 no 1.000000 2 1.000000 NA 1.000000 61.500000 atpF gene atpF atpF 27721 28158 -1 438 LSC 0.006849 3 0 91 152 no 1.000000 2 1.000000 NA 1.000000 51.100000 IGS_015 igs atpF|atpA atpF-atpA 28159 28230 0 72 LSC 0.000000 0 2 120 80 no 1.000000 2 1.000000 NA 0.972222 46.200000 atpA gene atpA atpA 28231 29757 1 1527 LSC 0.005894 9 0 192 22 no 1.000000 2 1.000000 NA 1.000000 48.700000 IGS_016 igs atpA|trnT atpA-trnT 29758 31695 0 1938 LSC 0.019011 25 623 300 4 no 1.000000 2 1.000000 NA 0.678535 50.500000 trnT tRNA trnT trnT 31696 31763 1 68 LSC 0.014706 1 0 2 2 no 1.000000 2 1.000000 NA 1.000000 46.100000 IGS_017 igs trnT|psbD trnT-psbD 31764 32931 0 1168 LSC 0.028194 32 33 63 179 no 1.000000 2 1.000000 NA 0.971747 67.300000 psbD gene psbD psbD 32932 33531 1 600 LSC 0.008333 5 0 42 187 no 1.000000 2 1.000000 NA 1.000000 51.700000 IGS_018 igs psbD|psbC psbD-psbC 33532 33956 0 425 LSC 0.007059 3 0 90 300 no 1.000000 2 1.000000 NA 1.000000 50.900000 psbC gene psbC psbC 33957 35378 1 1422 LSC 0.003516 5 0 46 23 no 1.000000 2 1.000000 NA 1.000000 47.500000 IGS_019 igs psbC|trnS-UGA psbC-trnS-UGA 35379 35642 0 264 LSC 0.071713 18 13 9 151 yes 1.000000 2 1.000000 NA 0.950758 74.000000 trnS-UGA tRNA trnS-UGA trnS-UGA 35643 35725 -1 83 LSC 0.000000 0 0 22 68 no 0.000000 1 0.000000 NA 1.000000 20.400000 IGS_020 igs trnS-UGA|psbZ trnS-UGA-psbZ 35726 36068 0 343 LSC 0.020896 7 8 105 125 no 1.000000 2 1.000000 NA 0.976676 60.500000 psbZ gene psbZ psbZ 36069 36257 1 189 LSC 0.005291 1 0 85 30 no 1.000000 2 1.000000 NA 1.000000 42.800000 IGS_021 igs psbZ|trnG psbZ-trnG 36258 36576 0 319 LSC 0.025078 8 0 63 76 no 1.000000 2 1.000000 NA 1.000000 57.000000 trnG tRNA trnG trnG 36577 36647 1 71 LSC 0.000000 0 0 31 5 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_022 igs trnG|trnfM trnG-trnfM 36648 36842 0 195 LSC 0.031746 6 6 102 58 no 1.000000 2 1.000000 NA 0.969231 63.000000 trnfM tRNA trnfM trnfM 36843 36916 -1 74 LSC 0.013514 1 0 10 111 no 1.000000 2 1.000000 NA 1.000000 46.000000 IGS_023 igs trnfM|rps14 trnfM-rps14 36917 37070 0 154 LSC 0.006494 1 0 15 300 no 1.000000 2 1.000000 NA 1.000000 42.400000 rps14 gene rps14 rps14 37071 37373 -1 303 LSC 0.000000 0 0 42 65 no 0.000000 1 0.000000 NA 1.000000 22.000000 IGS_024 igs rps14|psaB rps14-psaB 37374 37506 0 133 LSC 0.037594 5 0 300 6 no 1.000000 2 1.000000 NA 1.000000 59.600000 psaB gene psaB psaB 37507 39711 -1 2205 LSC 0.005442 12 0 3 300 no 1.000000 2 1.000000 NA 1.000000 45.600000 IGS_025 igs psaB|psaA psaB-psaA 39712 39736 0 25 LSC 0.000000 0 0 167 300 no 0.000000 1 0.000000 NA 1.000000 31.300000 psaA gene psaA psaA 39737 41989 -1 2253 LSC 0.003551 8 0 192 94 no 1.000000 2 1.000000 NA 1.000000 51.300000 IGS_026 igs psaA|ycf3 psaA-ycf3 41990 42707 0 718 LSC 0.027104 19 17 152 1 no 1.000000 2 1.000000 NA 0.976323 61.600000 ycf3 gene ycf3 ycf3 42708 42741 -1 34 LSC 0.117647 4 0 1 167 yes 1.000000 2 1.000000 NA 1.000000 72.600000 IGS_027 igs ycf3|trnS ycf3-trnS 42742 45608 0 2867 LSC 0.015986 45 52 26 103 no 1.000000 2 1.000000 NA 0.981863 53.800000 trnS tRNA trnS trnS 45609 45694 1 86 LSC 0.000000 0 0 37 17 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_028 igs trnS|rps4 trnS-rps4 45695 46027 0 333 LSC 0.027950 9 11 123 135 no 1.000000 2 1.000000 NA 0.966967 66.600000 rps4 gene rps4 rps4 46028 46633 -1 606 LSC 0.001650 1 0 12 26 no 1.000000 2 1.000000 NA 1.000000 45.600000 IGS_029 igs rps4|trnT-UGU rps4-trnT-UGU 46634 47061 0 428 LSC 0.013661 5 62 300 84 no 1.000000 2 1.000000 NA 0.855140 56.300000 trnT-UGU tRNA trnT-UGU trnT-UGU 47062 47134 -1 73 LSC 0.000000 0 0 114 11 no 0.000000 1 0.000000 NA 1.000000 19.600000 IGS_030 igs trnT-UGU|trnF trnT-UGU-trnF 47135 48564 0 1430 LSC 0.026020 37 8 187 123 no 1.000000 2 1.000000 NA 0.994406 68.500000 trnF tRNA trnF trnF 48565 48637 1 73 LSC 0.000000 0 0 119 50 no 0.000000 1 0.000000 NA 1.000000 22.500000 IGS_031 igs trnF|ndhJ trnF-ndhJ 48638 48873 0 236 LSC 0.008658 2 5 192 228 no 1.000000 2 1.000000 NA 0.978814 58.900000 ndhJ gene ndhJ ndhJ 48874 49350 -1 477 LSC 0.006289 3 0 5 39 no 1.000000 2 1.000000 NA 1.000000 45.200000 IGS_032 igs ndhJ|ndhK ndhJ-ndhK 49351 49452 0 102 LSC 0.009804 1 0 167 75 no 1.000000 2 1.000000 NA 1.000000 48.800000 ndhK gene ndhK ndhK 49453 50130 -1 678 LSC 0.008850 6 0 62 6 no 1.000000 2 1.000000 NA 1.000000 49.300000 IGS_033 igs ndhK|ndhC ndhK-ndhC 50131 50180 0 50 LSC 0.020000 1 0 146 188 no 1.000000 2 1.000000 NA 1.000000 59.900000 ndhC gene ndhC ndhC 50181 50543 -1 363 LSC 0.005510 2 0 43 45 no 1.000000 2 1.000000 NA 1.000000 45.200000 IGS_034 igs ndhC|atpE ndhC-atpE 50544 52634 0 2091 LSC 0.029469 61 21 34 91 yes 1.000000 2 1.000000 NA 0.989957 62.900000 atpE gene atpE atpE 52635 53036 -1 402 LSC 0.004975 2 0 5 173 no 1.000000 2 1.000000 NA 1.000000 42.900000 atpB gene atpB atpB 53033 54529 -1 1497 LSC 0.009352 14 0 100 69 no 1.000000 2 1.000000 NA 1.000000 54.300000 IGS_036 igs atpB|rbcL atpB-rbcL 54530 55302 0 773 LSC 0.011968 9 21 26 300 no 1.000000 2 1.000000 NA 0.972833 55.200000 rbcL gene rbcL rbcL 55303 56760 1 1458 LSC 0.008916 13 0 61 0 no 1.000000 2 1.000000 NA 1.000000 48.900000 IGS_037 igs rbcL|accD rbcL-accD 56761 57319 0 559 LSC 0.027473 15 13 14 54 no 1.000000 2 1.000000 NA 0.976744 61.900000 accD gene accD accD 57320 58762 1 1443 LSC 0.013860 20 0 63 37 no 1.000000 2 1.000000 NA 1.000000 54.500000 IGS_038 igs accD|psaI accD-psaI 58763 59515 0 753 LSC 0.025460 18 46 17 12 no 1.000000 2 1.000000 NA 0.938911 63.600000 psaI gene psaI psaI 59516 59626 1 111 LSC 0.018018 2 0 98 8 no 1.000000 2 1.000000 NA 1.000000 48.500000 IGS_039 igs psaI|ycf4 psaI-ycf4 59627 60033 0 407 LSC 0.028571 11 22 48 169 no 1.000000 2 1.000000 NA 0.945946 64.300000 ycf4 gene ycf4 ycf4 60034 60586 1 553 LSC 0.005425 3 0 52 22 no 1.000000 2 1.000000 NA 1.000000 47.500000 IGS_040 igs ycf4|cemA ycf4-cemA 60587 61444 0 858 LSC 0.036993 31 20 42 4 no 1.000000 2 1.000000 NA 0.976690 67.500000 cemA gene cemA cemA 61445 62134 1 690 LSC 0.011594 8 0 177 76 no 1.000000 2 1.000000 NA 1.000000 56.100000 IGS_041 igs cemA|petA cemA-petA 62135 62370 0 236 LSC 0.016949 4 0 75 29 no 1.000000 2 1.000000 NA 1.000000 49.400000 petA gene petA petA 62371 63333 1 963 LSC 0.009346 9 0 41 27 no 1.000000 2 1.000000 NA 1.000000 51.100000 IGS_042 igs petA|psbJ petA-psbJ 63334 64199 0 866 LSC 0.029487 23 86 246 146 yes 1.000000 2 1.000000 NA 0.900693 74.700000 psbJ gene psbJ psbJ 64200 64322 -1 123 LSC 0.000000 0 0 99 23 no 0.000000 1 0.000000 NA 1.000000 20.500000 IGS_043 igs psbJ|psbL psbJ-psbL 64323 64470 0 148 LSC 0.027027 4 0 222 137 no 1.000000 2 1.000000 NA 1.000000 63.300000 psbL gene psbL psbL 64471 64587 -1 117 LSC 0.000000 0 0 17 20 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_044 igs psbL|psbF psbL-psbF 64588 64609 0 22 LSC 0.045455 1 0 134 300 yes 1.000000 2 1.000000 NA 1.000000 73.700000 psbF gene psbF psbF 64610 64729 -1 120 LSC 0.000000 0 0 1 300 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_045 igs psbF|petL psbF-petL 64730 66244 0 1515 LSC 0.021117 31 47 121 109 no 1.000000 2 1.000000 NA 0.968977 67.000000 petL gene petL petL 66245 66340 1 96 LSC 0.000000 0 0 55 13 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_046 igs petL|petG petL-petG 66341 66505 0 165 LSC 0.012121 2 0 151 135 no 1.000000 2 1.000000 NA 1.000000 54.600000 petG gene petG petG 66506 66619 1 114 LSC 0.000000 0 0 135 21 no 0.000000 1 0.000000 NA 1.000000 20.300000 IGS_047 igs petG|trnW petG-trnW 66620 66747 0 128 LSC 0.031250 4 0 249 91 no 1.000000 2 1.000000 NA 1.000000 62.300000 trnW tRNA trnW trnW 66748 66820 -1 73 LSC 0.000000 0 0 30 18 no 0.000000 1 0.000000 NA 1.000000 20.100000 IGS_048 igs trnW|trnP trnW-trnP 66821 66983 0 163 LSC 0.018405 3 0 103 140 no 1.000000 2 1.000000 NA 1.000000 55.800000 trnP tRNA trnP trnP 66984 67057 -1 74 LSC 0.000000 0 0 13 66 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_049 igs trnP|psaJ trnP-psaJ 67058 67375 0 318 LSC 0.031447 10 0 87 171 no 1.000000 2 1.000000 NA 1.000000 62.500000 psaJ gene psaJ psaJ 67376 67504 1 129 LSC 0.000000 0 0 72 42 no 0.000000 1 0.000000 NA 1.000000 21.900000 IGS_050 igs psaJ|rpl33 psaJ-rpl33 67505 67954 0 450 LSC 0.038991 17 14 201 50 yes 1.000000 2 1.000000 NA 0.968889 69.700000 rpl33 gene rpl33 rpl33 67955 68155 1 201 LSC 0.019900 4 0 27 84 no 1.000000 2 1.000000 NA 1.000000 51.000000 IGS_051 igs rpl33|rps18 rpl33-rps18 68156 68331 0 176 LSC 0.017045 3 0 18 26 no 1.000000 2 1.000000 NA 1.000000 48.700000 rps18 gene rps18 rps18 68332 68637 1 306 LSC 0.003268 1 0 25 54 no 1.000000 2 1.000000 NA 1.000000 41.400000 IGS_052 igs rps18|rpl20 rps18-rpl20 68638 68900 0 263 LSC 0.024194 6 15 279 143 no 1.000000 2 1.000000 NA 0.942966 66.600000 rpl20 gene rpl20 rpl20 68901 69281 -1 381 LSC 0.005249 2 0 145 46 no 1.000000 2 1.000000 NA 1.000000 45.700000 IGS_053 igs rpl20|rps12 rpl20-rps12 69282 70011 0 730 LSC 0.008219 6 0 214 191 no 1.000000 2 1.000000 NA 1.000000 62.800000 rps12 gene rps12 rps12 70012 70125 1 114 LSC 0.000000 0 0 93 77 no 0.000000 1 0.000000 NA 1.000000 24.500000 IGS_054 igs rps12|clpP rps12-clpP 70126 70305 0 180 LSC 0.019355 3 25 207 9 no 1.000000 2 1.000000 NA 0.861111 51.300000 clpP gene clpP clpP 70306 72350 -1 2045 LSC 0.019019 38 47 20 108 no 1.000000 2 1.000000 NA 0.977017 57.200000 IGS_055 igs clpP|psbB clpP-psbB 72351 72849 0 499 LSC 0.034261 16 32 162 116 yes 1.000000 2 1.000000 NA 0.935872 74.200000 psbB gene psbB psbB 72850 74376 1 1527 LSC 0.006549 10 0 34 11 no 1.000000 2 1.000000 NA 1.000000 48.300000 IGS_056 igs psbB|psbT psbB-psbT 74377 74581 0 205 LSC 0.015707 3 14 14 23 no 1.000000 2 1.000000 NA 0.931707 51.800000 psbT gene psbT psbT 74582 74683 1 102 LSC 0.019802 2 1 60 20 no 1.000000 2 1.000000 NA 0.990196 51.300000 IGS_057 igs psbT|psbN psbT-psbN 74684 74758 0 75 LSC 0.013333 1 0 19 300 no 1.000000 2 1.000000 NA 1.000000 46.600000 psbN gene psbN psbN 74759 74890 -1 132 LSC 0.000000 0 0 54 300 no 0.000000 1 0.000000 NA 1.000000 22.800000 IGS_058 igs psbN|psbH psbN-psbH 74891 74992 0 102 LSC 0.000000 0 0 186 230 no 0.000000 1 0.000000 NA 1.000000 32.700000 psbH gene psbH psbH 74993 75214 1 222 LSC 0.000000 0 0 288 8 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_059 igs psbH|petB psbH-petB 75215 75338 0 124 LSC 0.016129 2 0 300 195 no 1.000000 2 1.000000 NA 1.000000 61.400000 petB gene petB petB 75339 76762 1 1424 LSC 0.011323 16 11 93 8 no 1.000000 2 1.000000 NA 0.992275 51.600000 IGS_060 igs petB|petD petB-petD 76763 76959 0 197 LSC 0.010152 2 0 240 119 no 1.000000 2 1.000000 NA 1.000000 52.300000 petD gene petD petD 76960 78167 1 1208 LSC 0.009259 11 20 178 23 no 1.000000 2 1.000000 NA 0.983444 52.400000 IGS_061 igs petD|rpoA petD-rpoA 78168 78573 0 406 LSC 0.022556 9 7 147 73 no 1.000000 2 1.000000 NA 0.982759 59.800000 rpoA gene rpoA rpoA 78574 79419 -1 846 LSC 0.013002 11 0 26 41 no 1.000000 2 1.000000 NA 1.000000 53.200000 IGS_062 igs rpoA|rps11 rpoA-rps11 79420 79477 0 58 LSC 0.057143 2 23 26 36 no 1.000000 2 1.000000 NA 0.603448 61.400000 rps11 gene rps11 rps11 79478 79888 -1 411 LSC 0.009732 4 0 8 27 no 1.000000 2 1.000000 NA 1.000000 46.000000 IGS_063 igs rps11|rpl36 rps11-rpl36 79889 79993 0 105 LSC 0.028571 3 0 47 162 no 1.000000 2 1.000000 NA 1.000000 57.500000 rpl36 gene rpl36 rpl36 79994 80107 -1 114 LSC 0.000000 0 0 1 48 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_064 igs rpl36|infA rpl36-infA 80108 80221 0 114 LSC 0.008772 1 0 115 93 no 1.000000 2 1.000000 NA 1.000000 49.500000 infA gene infA infA 80222 80455 -1 234 LSC 0.008547 2 0 65 30 no 1.000000 2 1.000000 NA 1.000000 44.700000 IGS_065 igs infA|rps8 infA-rps8 80456 80576 0 121 LSC 0.016529 2 0 44 48 no 1.000000 2 1.000000 NA 1.000000 50.300000 rps8 gene rps8 rps8 80577 80981 -1 405 LSC 0.012346 5 0 14 13 no 1.000000 2 1.000000 NA 1.000000 47.800000 IGS_066 igs rps8|rpl14 rps8-rpl14 80982 81168 0 187 LSC 0.021505 4 1 211 27 no 1.000000 2 1.000000 NA 0.994652 52.400000 rpl14 gene rpl14 rpl14 81169 81537 -1 369 LSC 0.010840 4 0 54 27 no 1.000000 2 1.000000 NA 1.000000 47.200000 rpl16 gene rpl16 rpl16 81172 81546 -1 375 LSC 0.010667 4 0 57 18 no 1.000000 2 1.000000 NA 1.000000 46.500000 IGS_068 igs rpl16|rpl22 rpl16-rpl22 81547 83868 0 2322 LSC 0.022414 52 2 38 59 no 1.000000 2 1.000000 NA 0.999139 57.900000 rpl22 gene rpl22 rpl22 83869 84333 -1 465 LSC 0.028322 13 6 7 144 no 1.000000 2 1.000000 NA 0.987097 59.000000 rps3 gene rps3 rps3 83869 84345 -1 477 LSC 0.027601 13 6 7 132 no 1.000000 2 1.000000 NA 0.987421 58.800000 IGS_070 igs rps3|rps19 rps3-rps19 84346 84405 0 60 LSC 0.000000 0 0 26 72 no 0.000000 1 0.000000 NA 1.000000 20.700000 rps19 gene rps19 rps19 84406 84684 -1 279 LSC 0.010753 3 0 86 32 no 1.000000 2 1.000000 NA 1.000000 46.100000 IGS_071 igs rps19|rpl2 rps19-rpl2 84685 84762 0 78 IRb 0.012987 1 1 39 300 no 1.000000 2 1.000000 NA 0.987179 49.100000 rpl2 gene rpl2 rpl2 84763 86228 -1 1466 IRb 0.001364 2 0 45 300 no 1.000000 2 1.000000 NA 1.000000 47.900000 IGS_072 igs rpl2|rpl23 rpl2-rpl23 86229 86246 0 18 IRb 0.000000 0 0 276 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 86247 86528 -1 282 IRb 0.000000 0 0 294 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_073 igs rpl23|ycf2 rpl23-ycf2 86529 86878 0 350 IRb 0.002857 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.200000 ycf2 gene ycf2 ycf2 86879 93674 1 6796 IRb 0.004715 32 9 4 177 no 1.000000 2 1.000000 NA 0.998676 40.600000 IGS_074 igs ycf2|rps7 ycf2-rps7 93675 97280 0 3606 IRb 0.003883 14 1 300 228 no 1.000000 2 1.000000 NA 0.999723 56.900000 rps7 gene rps7 rps7 97281 97748 -1 468 IRb 0.002137 1 0 115 300 no 1.000000 2 1.000000 NA 1.000000 50.900000 IGS_075 igs rps7|rps12 rps7-rps12 97749 98342 0 594 IRb 0.003367 2 0 239 300 no 1.000000 2 1.000000 NA 1.000000 60.600000 rps12 gene rps12 rps12 98343 98594 -1 252 IRb 0.000000 0 0 17 118 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_076 igs rps12|rrn16 rps12-rrn16 98595 100747 0 2153 IRb 0.007477 16 13 269 300 no 1.000000 2 1.000000 NA 0.993962 62.300000 rrn16 rRNA rrn16 rrn16 100748 102237 1 1490 IRb 0.000671 1 0 190 36 no 1.000000 2 1.000000 NA 1.000000 46.800000 IGS_077 igs rrn16|rrn23 rrn16-rrn23 102238 104266 0 2029 IRb 0.008383 17 1 300 300 no 1.000000 2 1.000000 NA 0.999507 62.500000 rrn23_part1 rRNA rrn23 rrn23 104267 104617 1 351 IRb 0.000000 0 0 99 300 no 0.000000 1 0.000000 NA 1.000000 27.200000 rrn23_part2 rRNA rrn23 rrn23 106903 107259 1 357 IRb 0.000000 0 0 300 114 no 0.000000 1 0.000000 NA 1.000000 28.500000 IGS_080 igs rrn23|rrn4.5 rrn23-rrn4.5 107260 107400 0 141 IRb 0.007092 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.600000 rrn4.5 rRNA rrn4.5 rrn4.5 107401 107503 1 103 IRb 0.000000 0 0 26 214 no 0.000000 1 0.000000 NA 1.000000 20.700000 IGS_081 igs rrn4.5|rrn5 rrn4.5-rrn5 107504 107747 0 244 IRb 0.008197 2 0 129 166 no 1.000000 2 1.000000 NA 1.000000 51.900000 rrn5 rRNA rrn5 rrn5 107748 107868 1 121 IRb 0.000000 0 0 5 45 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_082 igs rrn5|trnR-ACG rrn5-trnR-ACG 107869 108121 0 253 IRb 0.023715 6 0 126 144 no 1.000000 2 1.000000 NA 1.000000 60.600000 trnR-ACG tRNA trnR-ACG trnR-ACG 108122 108195 1 74 IRb 0.000000 0 0 1 70 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_083 igs trnR-ACG|ycf1 trnR-ACG-ycf1 108196 109446 0 1251 IRb 0.010450 13 7 75 8 no 1.000000 2 1.000000 NA 0.994404 50.900000 ycf1 gene ycf1 ycf1 109447 113367 1 3921 SSC 0.031746 124 15 2 118 no 1.000000 2 1.000000 NA 0.996174 57.900000 IGS_084 igs ycf1|ndhH ycf1-ndhH 113368 114236 0 869 SSC 0.016432 14 17 72 38 no 1.000000 2 1.000000 NA 0.980437 57.900000 ndhH gene ndhH ndhH 114237 115418 1 1182 SSC 0.010152 12 0 79 24 no 1.000000 2 1.000000 NA 1.000000 51.400000 IGS_085 igs ndhH|ndhA ndhH-ndhA 115419 115419 0 1 SSC 0.000000 0 0 213 23 no 0.000000 1 0.000000 NA 1.000000 20.500000 ndhA gene ndhA ndhA 115420 117571 -1 2152 SSC 0.020475 44 3 214 5 no 1.000000 2 1.000000 NA 0.998606 54.700000 IGS_086 igs ndhA|ndhI ndhA-ndhI 117572 117649 0 78 SSC 0.012821 1 0 24 29 no 1.000000 2 1.000000 NA 1.000000 46.700000 ndhI gene ndhI ndhI 117650 118144 1 495 SSC 0.006061 3 0 72 51 no 1.000000 2 1.000000 NA 1.000000 48.900000 IGS_087 igs ndhI|ndhG ndhI-ndhG 118145 118514 0 370 SSC 0.067568 25 0 4 107 yes 1.000000 2 1.000000 NA 1.000000 70.200000 ndhG gene ndhG ndhG 118515 119045 1 531 SSC 0.005650 3 0 33 15 no 1.000000 2 1.000000 NA 1.000000 46.700000 IGS_088 igs ndhG|ndhE ndhG-ndhE 119046 119261 0 216 SSC 0.027907 6 1 300 122 no 1.000000 2 1.000000 NA 0.995370 63.100000 ndhE gene ndhE ndhE 119262 119567 1 306 SSC 0.006536 2 0 43 2 no 1.000000 2 1.000000 NA 1.000000 41.500000 IGS_089 igs ndhE|psaC ndhE-psaC 119568 119805 0 238 SSC 0.004237 1 2 84 68 no 1.000000 2 1.000000 NA 0.991597 45.800000 psaC gene psaC psaC 119806 120051 1 246 SSC 0.004065 1 0 235 68 no 1.000000 2 1.000000 NA 1.000000 44.900000 IGS_090 igs psaC|ndhD psaC-ndhD 120052 120166 0 115 SSC 0.026087 3 0 177 50 no 1.000000 2 1.000000 NA 1.000000 56.200000 ndhD gene ndhD ndhD 120167 121669 1 1503 SSC 0.011976 18 0 26 15 no 1.000000 2 1.000000 NA 1.000000 51.800000 IGS_091 igs ndhD|ccsA ndhD-ccsA 121670 121910 0 241 SSC 0.040724 9 20 104 135 yes 1.000000 2 1.000000 NA 0.917012 72.200000 ccsA gene ccsA ccsA 121911 122878 -1 968 SSC 0.010406 10 7 46 103 no 1.000000 2 1.000000 NA 0.992769 53.900000 IGS_092 igs ccsA|rpl32 ccsA-rpl32 122879 123608 0 730 SSC 0.037604 27 12 236 9 no 1.000000 2 1.000000 NA 0.983562 67.600000 rpl32 gene rpl32 rpl32 123609 123773 -1 165 SSC 0.018182 3 0 62 25 no 1.000000 2 1.000000 NA 1.000000 49.800000 IGS_093 igs rpl32|ndhF rpl32-ndhF 123774 124866 0 1093 SSC 0.046602 48 63 74 230 yes 1.000000 2 1.000000 NA 0.942360 80.400000 ndhF gene ndhF ndhF 124867 127097 1 2231 SSC 0.018377 41 0 58 5 no 1.000000 2 1.000000 NA 1.000000 53.200000 IGS_094 igs ndhF|trnN ndhF-trnN 127098 128655 0 1558 SSC 0.006601 6 649 9 300 yes 1.000000 2 1.000000 NA 0.583440 42.500000 trnN tRNA trnN trnN 128656 128728 1 73 IRa 0.000000 0 0 300 246 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_095 igs trnN|trnR trnN-trnR 128729 129193 0 465 IRa 0.010917 5 7 300 75 no 1.000000 2 1.000000 NA 0.984946 54.300000 trnR tRNA trnR trnR 129194 129267 -1 74 IRa 0.000000 0 0 63 1 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_096 igs trnR|rrn5 trnR-rrn5 129268 129520 0 253 IRa 0.023715 6 0 137 126 no 1.000000 2 1.000000 NA 1.000000 60.600000 rrn5 rRNA rrn5 rrn5 129521 129641 -1 121 IRa 0.000000 0 0 45 5 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_097 igs rrn5|rrn4.5 rrn5-rrn4.5 129642 129885 0 244 IRa 0.008197 2 0 166 129 no 1.000000 2 1.000000 NA 1.000000 51.900000 rrn4.5 rRNA rrn4.5 rrn4.5 129886 129988 -1 103 IRa 0.000000 0 0 214 26 no 0.000000 1 0.000000 NA 1.000000 20.700000 IGS_098 igs rrn4.5|rrn23 rrn4.5-rrn23 129989 130938 0 950 IRa 0.001053 1 0 300 199 no 1.000000 2 1.000000 NA 1.000000 59.300000 rrn23_part2 rRNA rrn23 rrn23 130969 131439 -1 471 IRa 0.002123 1 0 300 225 no 1.000000 2 1.000000 NA 1.000000 57.300000 IGS_100 igs rrn23|rrn23 rrn23-rrn23 131440 132537 0 1098 IRa 0.001821 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.800000 rrn23_part1 rRNA rrn23 rrn23 132538 132879 -1 342 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.600000 IGS_101 igs rrn23|rrn16 rrn23-rrn16 132880 135152 0 2273 IRa 0.007482 17 1 300 300 no 1.000000 2 1.000000 NA 0.999560 61.500000 rrn16 rRNA rrn16 rrn16 135153 136642 -1 1490 IRa 0.000671 1 0 37 189 no 1.000000 2 1.000000 NA 1.000000 46.900000 IGS_102 igs rrn16|trnV rrn16-trnV 136643 136868 0 226 IRa 0.004425 1 0 300 199 no 1.000000 2 1.000000 NA 1.000000 55.000000 trnV tRNA trnV trnV 136869 136940 -1 72 IRa 0.000000 0 0 36 127 no 0.000000 1 0.000000 NA 1.000000 21.400000 IGS_103 igs trnV|rps7 trnV-rps7 136941 139640 0 2700 IRa 0.006327 17 13 108 239 no 1.000000 2 1.000000 NA 0.995185 53.500000 rps7 gene rps7 rps7 139641 140108 1 468 IRa 0.002137 1 0 300 115 no 1.000000 2 1.000000 NA 1.000000 50.900000 IGS_104 igs rps7|ndhB rps7-ndhB 140109 140397 0 289 IRa 0.017301 5 0 228 113 no 1.000000 2 1.000000 NA 1.000000 55.900000 ndhB gene ndhB ndhB 140398 142600 1 2203 IRa 0.002270 5 0 131 300 no 1.000000 2 1.000000 NA 1.000000 53.400000 IGS_105 igs ndhB|ycf2 ndhB-ycf2 142601 143714 0 1114 IRa 0.003594 4 1 189 300 no 1.000000 2 1.000000 NA 0.999102 60.100000 ycf2 gene ycf2 ycf2 143715 150510 -1 6796 IRa 0.004715 32 9 177 4 no 1.000000 2 1.000000 NA 0.998676 40.600000 IGS_106 igs ycf2|trnI ycf2-trnI 150511 150621 0 111 IRa 0.009009 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.700000 trnI tRNA trnI trnI 150622 150695 1 74 IRa 0.000000 0 0 106 300 no 0.000000 1 0.000000 NA 1.000000 26.700000 IGS_107 igs trnI|rpl23 trnI-rpl23 150696 150860 0 165 IRa 0.000000 0 0 180 300 no 0.000000 1 0.000000 NA 1.000000 32.200000 rpl23 gene rpl23 rpl23 150861 151142 1 282 IRa 0.000000 0 0 300 294 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_108 igs rpl23|rpl2 rpl23-rpl2 151143 151160 0 18 IRa 0.000000 0 0 300 276 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl2 gene rpl2 rpl2 151161 152649 1 1489 IRa 0.001343 2 0 300 22 no 1.000000 2 1.000000 NA 1.000000 46.200000 IGS_109 igs rpl2|rps19 rpl2-rps19 152650 152704 0 55 IRa 0.018519 1 1 300 39 no 1.000000 2 1.000000 NA 0.981818 52.800000 rps19 gene rps19 rps19 152705 152800 1 96 IRa 0.021739 2 4 32 80 no 1.000000 2 1.000000 NA 0.958333 56.300000 IGS_110 igs rps19|trnH rps19-trnH 152801 152803 0 3 LSC NA 2530 2959 36 77 no 1.000000 2 1.000000 NA 0.980636 58.400000