primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score ycf45_p1 ycf45 1 GGTTCATTTGGTGCAGGAGA GGAGAGGTGGTAGAGTTGGT 20 20 50.0 55.0 58.1 58.1 0.0 0.0 0.150320 93193 94821 2468-2468 1.000000 83.5 ycf45_p2 ycf45 2 GGTTCATTTGGTGCAGGAGA TGGAGAGGTGGTAGAGTTGG 20 20 50.0 55.0 58.1 58.1 0.0 0.0 0.151716 93193 94821 2469-2469 1.000000 83.5 ycf45_p3 ycf45 3 GGTTCATTTGGTGCAGGAGA TTTCAGCATCTTCATCCGGG 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.132986 93193 94821 2304-2304 0.500000 58.9 ycf45_p4 ycf45 4 TGAGTTCAAATGAGTGCGCT TTTCAGCATCTTCATCCGGG 20 20 45.0 50.0 58.1 58.0 9.7 0.0 0.159774 93193 94821 2059-2059 0.500000 58.7 ycf45_p5 ycf45 5 ATGTGCCAACCATAGGTGAC TTTCAGCATCTTCATCCGGG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.171457 93193 94821 2276-2276 0.500000 58.6 trnS(tga)-psaD_p1 trnS(tga)-psaD 1 CCGCAAATTACACGTGCATT GATGGTCGTGAAGCAGCTAA 20 20 45.0 50.0 58.0 58.0 17.2 0.0 0.034308 95269 95720 1283-1283 0.500000 59.7 trnS(tga)-psaD_p2 trnS(tga)-psaD 2 CCCGGATGAAGATGCTGAAA GATGGTCGTGAAGCAGCTAA 20 20 50.0 50.0 58.0 58.0 0.7 0.0 0.052831 95269 95720 732-732 0.500000 59.6 trnS(tga)-psaD_p3 trnS(tga)-psaD 3 ACCAACTCTACCACCTCTCC GATGGTCGTGAAGCAGCTAA 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.070165 95269 95720 568-568 0.500000 59.4 trnS(tga)-psaD_p4 trnS(tga)-psaD 4 CCGCAAATTACACGTGCATT TACGCAATGTTCCGATGTGT 20 20 45.0 45.0 58.0 57.9 17.2 0.0 0.111664 95269 95720 1881-1881 0.500000 59.1 trnS(tga)-psaD_p5 trnS(tga)-psaD 5 ATAGCAACACAGTTCCGCAA GATGGTCGTGAAGCAGCTAA 20 20 45.0 50.0 58.1 58.0 0.0 0.0 0.119269 95269 95720 1297-1297 0.500000 59.0 psaD-chlB_p1 psaD-chlB 1 CCAGTACTCCCACCAAATGT ACCTGCGTACATCCAGTATG 20 20 50.0 50.0 57.1 57.1 0.0 0.0 1.769911 96147 96359 299-300 1.000000 73.8 psaD-chlB_p2 psaD-chlB 2 CCAGTACTCCCACCAAATGT GGACCTGCGTACATCCAGTA 20 20 50.0 55.0 57.1 58.9 0.0 0.0 1.770326 96147 96359 301-302 1.000000 73.8 psaD-chlB_p3 psaD-chlB 3 CCCACCAAATGTAGGAGAAGG ACCTGCGTACATCCAGTATG 21 20 52.4 50.0 58.0 57.1 0.0 0.0 1.895560 96147 96359 291-292 1.000000 72.8 psaD-chlB_p4 psaD-chlB 4 CCCACCAAATGTAGGAGAAGG GGACCTGCGTACATCCAGTA 21 20 52.4 55.0 58.0 58.9 0.0 0.0 1.895976 96147 96359 293-294 1.000000 72.8 psaD-chlB_p5 psaD-chlB 5 CACCAAATGTAGGAGAAGGCA ACCTGCGTACATCCAGTATG 21 20 47.6 50.0 57.9 57.1 0.0 0.0 1.962682 96147 96359 289-290 1.000000 72.3 chlB_p1 chlB 1 CTCAGGGATGCTAAAGCGTT GTCCTATCGCTTGCTTCCAA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.054014 98218 98337 1132-1132 0.500000 59.6 chlB_p2 chlB 2 CTCAGGGATGCTAAAGCGTT ACTTTTTCTTGCGAACCCCT 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.097204 98218 98337 937-937 0.500000 59.2 chlB_p3 chlB 3 CTCAGGGATGCTAAAGCGTT CGGTCTCTTTCCAGCATTGA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.128979 98218 98337 868-868 0.500000 59.0 chlB_p4 chlB 4 CTCAGGGATGCTAAAGCGTT GCTGCCCTGTCTACAAAGTT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.132278 98218 98337 1054-1054 0.500000 58.9 chlB_p5 chlB 5 ATCTTAGCCTCAGGGATGCT GTCCTATCGCTTGCTTCCAA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.139513 98218 98337 1140-1140 0.500000 58.9 orf441_p1 orf441 1 CAGGGCGTTGCTCTTTATCT GTCCTATCGCTTGCTTCCAA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.054014 96999 98324 2140-2141 1.000000 85.7 orf441_p2 orf441 2 CAGGGCGTTGCTCTTTATCT CGGTCTCTTTCCAGCATTGA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.128979 96999 98324 1876-1877 1.000000 85.4 orf441_p3 orf441 3 TCGTGCGACTTGTTCATGAT GTCCTATCGCTTGCTTCCAA 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.103024 96999 98324 2246-2247 1.000000 85.1 orf441_p4 orf441 4 ACACATCGGAACATTGCGTA GTCCTATCGCTTGCTTCCAA 20 20 45.0 50.0 57.9 58.0 5.4 0.0 0.111677 96999 98324 2326-2327 1.000000 84.9 orf441_p5 orf441 5 CAGGGCGTTGCTCTTTATCT ACTTTTTCTTGCGAACCCCT 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.097204 96999 98324 1945-1945 0.500000 59.2 atpB_p1 atpB 1 GTCTGGTGCAATCACTCGTA TGTCTTTTTACATTCATTGCTCA 20 23 50.0 30.4 57.6 55.1 0.0 0.0 6.284342 115009 116433 1528-1530 1.000000 43.7 atpB_p2 atpB 2 GTCTGGTGCAATCACTCGTA GTTGTCTTTTTACATTCATTGCTCA 20 25 50.0 32.0 57.6 57.1 0.0 0.0 6.292696 115009 116433 1530-1532 1.000000 43.7 atpB_p3 atpB 3 GTCTGGTGCAATCACTCGTA TGAGTTGTCTTTTTACATTCATTGC 20 25 50.0 32.0 57.6 57.1 0.0 0.0 6.292696 115009 116433 1533-1535 1.000000 43.7 atpB_p4 atpB 4 TCTGTCTGGTGCAATCACTC TGTCTTTTTACATTCATTGCTCA 20 23 50.0 30.4 57.5 55.1 0.0 0.0 6.383011 115009 116433 1531-1533 1.000000 43.7 atpB_p5 atpB 5 GTCTGGTGCAATCACTCGTA CTGAGTTGTCTTTTTACATTCATTGC 20 26 50.0 34.6 57.6 58.0 0.0 0.0 6.364073 115009 116433 1534-1536 1.000000 43.6 ycf92_p1 ycf92 1 GCCTTTGGCTCTTCCTTCTT TGCGTATACCAATTTCGCCA 20 20 50.0 45.0 58.1 58.0 0.7 0.0 0.109083 138538 139332 1174-1175 1.000000 86.8 ycf92_p2 ycf92 2 GCCTTTGGCTCTTCCTTCTT TGTCTCCCCAATGTACCTGT 20 20 50.0 50.0 58.1 58.0 0.7 0.0 0.122357 138538 139332 1359-1360 1.000000 86.2 ycf92_p3 ycf92 3 TATCGAAGACGGCGTCTACT TGCGTATACCAATTTCGCCA 20 20 50.0 45.0 58.1 58.0 39.1 0.0 0.080201 138538 139332 1423-1423 0.500000 59.4 ycf92_p4 ycf92 4 TATCGAAGACGGCGTCTACT TGTCTCCCCAATGTACCTGT 20 20 50.0 50.0 58.1 58.0 39.1 0.0 0.093476 138538 139332 1608-1608 0.500000 59.3 ycf92_p5 ycf92 5 TATCGAAGACGGCGTCTACT TCTAACGCTCTCCTGACGAT 20 20 50.0 50.0 58.1 58.0 39.1 0.0 0.094431 138538 139332 1629-1629 0.500000 59.2 cpcS_p1 cpcS 1 TCCGAGGCTAAGAAAACCCT ATTATGCGCGCGGATTAGAT 20 20 50.0 45.0 58.3 58.0 0.0 40.3 0.357198 141227 141685 917-917 0.500000 57.1 cpcS_p2 cpcS 2 CGCAACTCTCTGGGTTGTAT ATTATGCGCGCGGATTAGAT 20 20 50.0 45.0 57.6 58.0 11.3 40.3 0.396806 141227 141685 1176-1176 0.500000 56.8 cpcS_p3 cpcS 3 TCCGAGGCTAAGAAAACCCT AGCTTGCCACAAGACCTAAC 20 20 50.0 50.0 58.3 58.1 0.0 11.4 0.449493 141227 141685 1214-1214 0.500000 56.4 cpcS_p4 cpcS 4 CGCAACTCTCTGGGTTGTAT AGCTTGCCACAAGACCTAAC 20 20 50.0 50.0 57.6 58.1 11.3 11.4 0.489101 141227 141685 1473-1473 0.500000 56.1 cpcS_p5 cpcS 5 TTCCGAGGCTAAGAAAACCC ATTATGCGCGCGGATTAGAT 20 20 50.0 45.0 57.5 58.0 0.0 40.3 0.494887 141227 141685 918-918 0.500000 56.0 orf768_p1 orf768 1 CTCCTTGCTGATGCTCAACT AGGAAATTGCTCGAGACGTC 20 20 50.0 50.0 57.9 58.0 0.0 18.7 0.113232 141706 144012 2690-2690 1.000000 86.2 orf768_p2 orf768 2 TGAGTCATCCATTGGCCATG AGGAAATTGCTCGAGACGTC 20 20 50.0 50.0 57.9 58.0 6.1 18.7 0.063840 141706 144012 2403-2403 0.500000 59.5 orf768_p3 orf768 3 TGAGTCATCCATTGGCCATG ACTTCTGCATGTGGGTCAAG 20 20 50.0 50.0 57.9 58.1 6.1 0.0 0.159919 141706 144012 2571-2571 0.500000 58.7 orf768_p4 orf768 4 TGAGTCATCCATTGGCCATG CTGCATGTGGGTCAAGTTCT 20 20 50.0 50.0 57.9 58.1 6.1 0.0 0.159919 141706 144012 2567-2567 0.500000 58.7 orf768_p5 orf768 5 TGAGTCATCCATTGGCCATG CTTCTGCATGTGGGTCAAGT 20 20 50.0 50.0 57.9 58.1 6.1 0.0 0.159919 141706 144012 2570-2570 0.500000 58.7 orf402_p1 orf402 1 GCTGACGTATTACACCATCAGA TGAAACTTTCATCTCATACGGCT 22 23 45.5 39.1 58.0 58.2 14.1 0.0 5.209492 145528 146730 1279-1282 1.000000 46.4 orf402_p2 orf402 2 AGCTGACGTATTACACCATCAG TGAAACTTTCATCTCATACGGCT 22 23 45.5 39.1 58.0 58.2 0.0 0.0 5.214690 145528 146730 1280-1283 1.000000 46.4 orf402_p3 orf402 3 GCTGACGTATTACACCATCAGA TGAAACTTTCATCTCATACGGC 22 22 45.5 40.9 58.0 56.8 14.1 0.0 5.248671 145528 146730 1279-1282 1.000000 46.4 orf402_p4 orf402 4 AGCTGACGTATTACACCATCAG TGAAACTTTCATCTCATACGGC 22 22 45.5 40.9 58.0 56.8 0.0 0.0 5.253869 145528 146730 1280-1283 1.000000 46.4 orf402_p5 orf402 5 AGCTGACGTATTACACCATCA TGAAACTTTCATCTCATACGGCT 21 23 42.9 39.1 56.8 58.2 0.0 0.0 5.331456 145528 146730 1280-1283 1.000000 46.4 cfxQ-trnC(gca)_p1 cfxQ-trnC(gca) 1 ACAGTCAGAAGATATTATGAAAAGCA CCTTACCACTTGGCCATACC 26 20 30.8 55.0 57.0 57.9 0.0 6.1 7.077798 152849 152903 124-124 1.000000 44.5 cfxQ-trnC(gca)_p2 cfxQ-trnC(gca) 2 ACAGTCAGAAGATATTATGAAAAGCAG CCTTACCACTTGGCCATACC 27 20 33.3 55.0 57.9 57.9 0.0 6.1 7.159959 152849 152903 124-124 1.000000 44.5 cfxQ-trnC(gca)_p3 cfxQ-trnC(gca) 3 ACAGTCAGAAGATATTATGAAAAGCA TTGCAATCCTCTGCCTTACC 26 20 30.8 50.0 57.0 57.9 0.0 0.0 7.153786 152849 152903 137-137 1.000000 44.1 cfxQ-trnC(gca)_p4 cfxQ-trnC(gca) 4 ACAGTCAGAAGATATTATGAAAAGCA TCGAACTGGGGGTAAAGGAT 26 20 30.8 50.0 57.0 58.0 0.0 0.0 7.063882 152849 152903 157-157 1.000000 43.6 cfxQ-trnC(gca)_p5 cfxQ-trnC(gca) 5 ACAGTCAGAAGATATTATGAAAAGCAG TCGAACTGGGGGTAAAGGAT 27 20 33.3 50.0 57.9 58.0 0.0 0.0 7.146044 152849 152903 157-157 1.000000 43.6 trnC(gca)-trnL(taa)_p1 trnC(gca)-trnL(taa) 1 ATCCTTTACCCCCAGTTCGA GTCTACCATTCCACCACACC 20 20 50.0 55.0 58.0 57.9 0.0 0.0 0.148292 152975 153013 97-97 1.000000 83.8 trnC(gca)-trnL(taa)_p2 trnC(gca)-trnL(taa) 2 GGTATGGCCAAGTGGTAAGG GTCTACCATTCCACCACACC 20 20 55.0 55.0 57.9 57.9 11.0 0.0 0.162207 152975 153013 130-130 1.000000 82.4 trnC(gca)-trnL(taa)_p3 trnC(gca)-trnL(taa) 3 GGTAAGGCAGAGGATTGCAA GTCTACCATTCCACCACACC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.238195 152975 153013 117-117 1.000000 82.2 trnC(gca)-trnL(taa)_p4 trnC(gca)-trnL(taa) 4 TGCAAATCCTTTACCCCCAG GTCTACCATTCCACCACACC 20 20 50.0 55.0 57.8 57.9 0.0 0.0 0.339554 152975 153013 102-102 1.000000 82.0 trnC(gca)-trnL(taa)_p5 trnC(gca)-trnL(taa) 5 AGGCAGAGGATTGCAAATCC GTCTACCATTCCACCACACC 20 20 50.0 55.0 58.2 57.9 1.7 0.0 0.336588 152975 153013 113-113 1.000000 81.6 ycf80-ssrA_p1 ycf80-ssrA 1 AACTGCAACGACTCAAGGTT GAGGGCATGTAACTCAGTGG 20 20 45.0 55.0 58.0 58.0 0.0 0.0 0.068225 156210 156974 1986-1990 1.000000 84.2 ycf80-ssrA_p2 ycf80-ssrA 2 AACTGCAACGACTCAAGGTT CGTTTTCCCGTGGCTTAGTA 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.121553 156210 156974 1721-1725 1.000000 83.9 ycf80-ssrA_p3 ycf80-ssrA 3 AACTGCAACGACTCAAGGTT TACGTTTTCCCGTGGCTTAG 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.121553 156210 156974 1723-1727 1.000000 83.9 ycf80-ssrA_p4 ycf80-ssrA 4 AGTCGAATCTGCTTGGCAAA GAGGGCATGTAACTCAGTGG 20 20 45.0 55.0 58.1 58.0 0.0 0.0 0.133619 156210 156974 1508-1512 1.000000 83.9 ycf80-ssrA_p5 ycf80-ssrA 5 CCTGGAAATATGACCGTCCG GAGGGCATGTAACTCAGTGG 20 20 55.0 55.0 58.1 58.0 0.0 0.0 0.163973 156210 156974 1661-1661 0.500000 58.7 orf88-apcF_p1 orf88-apcF 1 CCACTGAGTTACATGCCCTC AAGTGTCTCGCAATCCATCC 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.059677 157815 158374 1258-1258 0.500000 59.5 orf88-apcF_p2 orf88-apcF 2 CCACTGAGTTACATGCCCTC AAGAATTCCCACCGGGTCTA 20 20 55.0 50.0 58.0 58.0 0.0 6.3 0.068705 157815 158374 1129-1129 0.500000 59.5 orf88-apcF_p3 orf88-apcF 3 CCACTGAGTTACATGCCCTC AGAATTCCCACCGGGTCTAA 20 20 55.0 50.0 58.0 58.0 0.0 6.3 0.068705 157815 158374 1128-1128 0.500000 59.5 orf88-apcF_p4 orf88-apcF 4 CCACTGAGTTACATGCCCTC TAAGAATTCCCACCGGGTCT 20 20 55.0 50.0 58.0 58.0 0.0 6.3 0.068705 157815 158374 1130-1130 0.500000 59.5 orf88-apcF_p5 orf88-apcF 5 CTAAGCCACGGGAAAACGTA AAGTGTCTCGCAATCCATCC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.113005 157815 158374 1521-1521 0.500000 59.1 ycf23_p1 ycf23 1 AGAACCTACGGTAAGCCCTT CCACCAGCAGAGGTTGATAC 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.081447 165076 165924 1645-1645 1.000000 85.3 ycf23_p2 ycf23 2 AGAACCTACGGTAAGCCCTT CCAGCAGAGGTTGATACACC 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.081447 165076 165924 1642-1642 1.000000 85.3 ycf23_p3 ycf23 3 ATCCTGTCAGCTTGCTTGAG CCACCAGCAGAGGTTGATAC 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.140740 165076 165924 1677-1677 0.500000 58.9 ycf23_p4 ycf23 4 ATCCTGTCAGCTTGCTTGAG CCAGCAGAGGTTGATACACC 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.140740 165076 165924 1674-1674 0.500000 58.9 ycf23_p5 ycf23 5 CCTGTCAGCTTGCTTGAGAA CCAGCAGAGGTTGATACACC 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.141624 165076 165924 1672-1672 0.500000 58.9 psaM-rrs_p1 psaM-rrs 1 TGCAACGAAAATTTGGCTGT CGTCCGCCACTAAGGTAAAA 20 20 40.0 50.0 57.4 57.9 0.0 0.0 0.676513 187357 188235 990-994 1.000000 83.9 psaM-rrs_p2 psaM-rrs 2 TGCAACGAAAATTTGGCTGT AACCTTCGTTCGACTTGCAT 20 20 40.0 45.0 57.4 58.1 0.0 0.0 0.714393 187357 188235 972-976 1.000000 83.6 psaM-rrs_p3 psaM-rrs 3 TGCAACGAAAATTTGGCTGT CTTCGTTCGACTTGCATGTG 20 20 40.0 50.0 57.4 57.8 0.0 10.4 0.810699 187357 188235 969-973 1.000000 82.8 psaM-rrs_p4 psaM-rrs 4 TGCAACGAAAATTTGGCTGT TGCATGTGTTAGGCATACCG 20 20 40.0 50.0 57.4 58.3 0.0 0.0 0.930829 187357 188235 957-961 1.000000 81.9 psaM-rrs_p5 psaM-rrs 5 TGCAACGAAAATTTGGCTGT AAACCTTCGTTCGACTTGCA 20 20 40.0 45.0 57.4 58.3 0.0 0.0 0.934352 187357 188235 973-977 1.000000 81.8