feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH tRNA trnH trnH 118 190 -1 73 LSC 0.000000 0 0 26 41 no 0.000000 1 0.000000 0.000000 1.000000 20.700000 IGS_001 igs trnH|psbA trnH-psbA 191 471 0 281 LSC 0.026905 12 91 99 300 yes 1.000000 6 1.000000 0.028697 0.676157 58.300000 psbA gene psbA psbA 472 1533 -1 1062 LSC 0.000000 0 0 60 165 no 0.000000 1 0.000000 0.000000 1.000000 29.500000 IGS_002 igs psbA|trnK psbA-trnK 1534 1802 0 269 LSC 0.004709 3 1 300 147 no 0.500000 4 0.750000 0.004712 1.000000 43.100000 trnK_part2 tRNA trnK trnK 1803 1837 -1 35 LSC 0.000000 0 0 101 112 no 0.000000 1 0.000000 0.000000 1.000000 26.300000 matK gene matK matK 2147 3655 -1 1509 LSC 0.006229 24 0 23 86 no 1.000000 6 1.000000 0.006229 1.000000 50.200000 IGS_005 igs matK|trnK matK-trnK 3656 4411 0 756 LSC 0.006231 12 11 37 40 no 0.666667 5 0.800000 0.006246 0.989418 46.500000 trnK_part1 tRNA trnK trnK 4412 4448 -1 37 LSC 0.000000 0 1 262 3 no 0.166667 2 0.500000 0.000000 0.972973 24.400000 IGS_006 igs trnK|rps16 trnK-rps16 4449 5094 0 646 LSC 0.008050 15 2 299 19 no 0.666667 5 0.800000 0.008058 1.000000 45.800000 rps16 gene rps16 rps16 5095 6247 -1 1153 LSC 0.003700 11 1 36 131 no 0.333333 3 0.666667 0.003702 1.000000 36.900000 IGS_007 igs rps16|trnQ rps16-trnQ 6248 6695 0 448 LSC 0.008090 10 13 300 147 yes 0.666667 5 0.800000 0.008238 0.975446 54.500000 trnQ tRNA trnQ trnQ 6696 6767 -1 72 LSC 0.000000 0 0 22 75 no 0.000000 1 0.000000 0.000000 1.000000 20.400000 IGS_008 igs trnQ|psbK trnQ-psbK 6768 7107 0 340 LSC 0.003922 4 0 94 131 no 0.500000 4 0.750000 0.003922 1.000000 39.200000 psbK gene psbK psbK 7108 7293 1 186 LSC 0.001792 1 0 83 32 no 0.166667 2 0.500000 0.001792 1.000000 25.800000 IGS_009 igs psbK|psbI psbK-psbI 7294 7581 0 288 LSC 0.007639 5 1 54 138 no 0.666667 5 0.800000 0.007654 1.000000 41.300000 psbI gene psbI psbI 7582 7692 1 111 LSC 0.000000 0 0 32 27 no 0.000000 1 0.000000 0.000000 1.000000 20.800000 IGS_010 igs psbI|trnS psbI-trnS 7693 7783 0 91 LSC 0.014652 4 0 143 130 no 0.666667 5 0.800000 0.014652 1.000000 53.100000 trnS tRNA trnS trnS 7784 7871 1 88 LSC 0.000000 0 0 46 42 no 0.000000 1 0.000000 0.000000 1.000000 21.900000 IGS_011 igs trnS|trnG trnS-trnG 7872 8537 0 666 LSC 0.020623 33 40 134 170 yes 1.000000 6 1.000000 0.021136 0.957958 74.000000 trnG_part1 tRNA trnG trnG 8538 8560 1 23 LSC 0.000000 0 0 54 147 no 0.000000 1 0.000000 0.000000 1.000000 22.800000 trnG_part2 tRNA trnG trnG 9284 9332 1 49 LSC 0.000000 0 0 66 24 no 0.000000 1 0.000000 0.000000 1.000000 20.600000 IGS_014 igs trnG|trnR trnG-trnR 9333 9517 0 185 LSC 0.015638 5 24 115 121 no 0.666667 5 0.800000 0.015663 0.875676 51.700000 trnR tRNA trnR trnR 9518 9589 1 72 LSC 0.000000 0 0 37 49 no 0.000000 1 0.000000 0.000000 1.000000 21.500000 IGS_015 igs trnR|atpA trnR-atpA 9590 9880 0 291 LSC 0.009851 8 3 109 105 no 1.000000 6 1.000000 0.009915 0.996564 54.400000 atpA gene atpA atpA 9881 11404 -1 1524 LSC 0.002625 9 0 54 156 no 0.666667 5 0.800000 0.002625 1.000000 43.400000 IGS_016 igs atpA|atpF atpA-atpF 11405 11470 0 66 LSC 0.000000 0 1 270 90 no 0.000000 2 0.000000 0.000000 0.984848 26.900000 atpF gene atpF atpF 11471 12760 -1 1290 LSC 0.001973 7 6 300 0 no 0.500000 4 0.750000 0.001973 0.995349 36.300000 IGS_017 igs atpF|atpH atpF-atpH 12761 13226 0 466 LSC 0.011159 12 0 300 54 no 0.333333 4 0.500000 0.011159 1.000000 40.700000 atpH gene atpH atpH 13227 13472 -1 246 LSC 0.009214 5 0 5 118 no 0.333333 3 0.666667 0.009214 1.000000 32.100000 IGS_018 igs atpH|atpI atpH-atpI 13473 14001 0 529 LSC 0.011616 15 2 83 18 no 0.666667 5 0.800000 0.011375 0.998110 46.500000 atpI gene atpI atpI 14002 14751 -1 750 LSC 0.001778 4 0 11 53 no 0.500000 4 0.750000 0.001778 1.000000 36.700000 IGS_019 igs atpI|rps2 atpI-rps2 14752 14959 0 208 LSC 0.003221 2 2 206 300 no 0.500000 4 0.750000 0.003224 0.995192 46.800000 rps2 gene rps2 rps2 14960 15670 -1 711 LSC 0.000750 1 0 61 22 no 0.000000 2 0.000000 0.000750 1.000000 27.200000 IGS_020 igs rps2|rpoC2 rps2-rpoC2 15671 15899 0 229 LSC 0.011645 8 2 260 54 no 1.000000 6 1.000000 0.011713 0.995633 52.100000 rpoC2 gene rpoC2 rpoC2 15900 20015 -1 4116 LSC 0.003353 36 6 3 116 no 1.000000 6 1.000000 0.003354 1.000000 41.900000 IGS_021 igs rpoC2|rpoC1 rpoC2-rpoC1 20016 20197 0 182 LSC 0.003663 2 0 44 81 no 0.333333 3 0.666667 0.003663 1.000000 31.300000 rpoC1 gene rpoC1 rpoC1 20198 23018 -1 2821 LSC 0.002388 19 7 55 76 no 1.000000 6 1.000000 0.002391 0.999646 47.300000 IGS_022 igs rpoC1|rpoB rpoC1-rpoB 23019 23044 0 26 LSC 0.000000 0 0 245 50 no 0.000000 1 0.000000 0.000000 1.000000 22.500000 rpoB gene rpoB rpoB 23045 26263 -1 3219 LSC 0.001615 15 0 271 139 no 1.000000 6 1.000000 0.001615 1.000000 52.000000 IGS_023 igs rpoB|trnC rpoB-trnC 26264 27373 0 1110 LSC 0.010941 30 9 65 73 no 0.666667 5 0.800000 0.010885 0.992793 51.400000 trnC tRNA trnC trnC 27374 27444 1 71 LSC 0.000000 0 0 40 2 no 0.000000 1 0.000000 0.000000 1.000000 18.900000 IGS_024 igs trnC|petN trnC-petN 27445 28047 0 603 LSC 0.014262 19 9 111 38 yes 0.666667 5 0.800000 0.012607 0.995025 52.400000 petN gene petN petN 28048 28137 1 90 LSC 0.005926 1 0 93 73 no 0.000000 2 0.000000 0.005926 1.000000 28.300000 IGS_025 igs petN|psbM petN-psbM 28138 28592 0 455 LSC 0.008498 11 0 51 118 no 0.666667 5 0.800000 0.008498 1.000000 45.200000 psbM gene psbM psbM 28593 28697 -1 105 LSC 0.000000 0 0 18 13 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_026 igs psbM|trnD psbM-trnD 28698 29724 0 1027 LSC 0.008008 21 28 123 97 yes 1.000000 6 1.000000 0.008111 0.991237 60.200000 trnD tRNA trnD trnD 29725 29798 -1 74 LSC 0.000000 0 0 10 23 no 0.000000 1 0.000000 0.000000 1.000000 19.500000 IGS_027 igs trnD|trnY trnD-trnY 29799 30252 0 454 LSC 0.009756 12 4 84 300 no 0.666667 5 0.800000 0.009771 0.991189 49.200000 trnY tRNA trnY trnY 30253 30336 -1 84 LSC 0.000000 0 0 115 243 no 0.000000 1 0.000000 0.000000 1.000000 27.400000 IGS_028 igs trnY|trnE trnY-trnE 30337 30395 0 59 LSC 0.000000 0 0 199 184 no 0.000000 1 0.000000 0.000000 1.000000 32.600000 trnE tRNA trnE trnE 30396 30468 -1 73 LSC 0.000000 0 0 258 111 no 0.000000 1 0.000000 0.000000 1.000000 27.100000 IGS_029 igs trnE|trnT trnE-trnT 30469 31128 0 660 LSC 0.009091 16 9 300 91 yes 1.000000 6 1.000000 0.008970 0.990909 59.100000 trnT tRNA trnT trnT 31129 31200 1 72 LSC 0.000000 0 0 1 19 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_030 igs trnT|psbD trnT-psbD 31201 32320 0 1120 LSC 0.006589 18 8 73 149 no 0.500000 4 0.750000 0.006593 0.993750 45.500000 psbD gene psbD psbD 32321 33382 1 1062 LSC 0.000628 2 0 102 234 no 0.333333 3 0.666667 0.000628 1.000000 39.400000 psbC gene psbC psbC 33330 34751 1 1422 LSC 0.001969 6 0 300 50 no 0.500000 4 0.750000 0.001969 1.000000 39.500000 IGS_032 igs psbC|trnS psbC-trnS 34752 34926 0 175 LSC 0.004952 2 1 198 115 no 0.500000 4 0.750000 0.004959 1.000000 41.100000 trnS tRNA trnS trnS 34927 35556 1 630 LSC 0.006359 11 2 61 111 no 0.666667 5 0.800000 0.005517 0.996825 47.400000 psbZ gene psbZ psbZ 35368 35556 1 189 LSC 0.007055 4 0 65 111 no 0.333333 3 0.666667 0.007055 1.000000 35.700000 IGS_034 igs psbZ|trnG psbZ-trnG 35557 36016 0 460 LSC 0.009692 12 20 69 300 yes 1.000000 6 1.000000 0.009804 0.984783 58.300000 IGS_035 igs trnG|trnfM trnG-trnfM 36088 36236 0 149 LSC 0.000000 0 0 127 123 no 0.000000 1 0.000000 0.000000 1.000000 28.000000 trnfM tRNA trnfM trnfM 36237 36310 -1 74 LSC 0.000000 0 0 276 49 no 0.000000 1 0.000000 0.000000 1.000000 22.400000 IGS_036 igs trnfM|rps14 trnfM-rps14 36311 36466 0 156 LSC 0.005983 2 0 300 150 no 0.166667 3 0.333333 0.005983 1.000000 37.400000 rps14 gene rps14 rps14 36467 36769 -1 303 LSC 0.002200 2 0 0 44 no 0.333333 3 0.666667 0.002200 1.000000 26.900000 IGS_037 igs rps14|psaB rps14-psaB 36770 36919 0 150 LSC 0.014493 4 13 64 45 no 0.500000 4 0.750000 0.014595 0.913333 44.300000 psaB gene psaB psaB 36920 39124 -1 2205 LSC 0.001481 8 0 27 135 no 0.500000 4 0.750000 0.001481 1.000000 36.100000 IGS_038 igs psaB|psaA psaB-psaA 39125 39149 0 25 LSC 0.000000 0 0 300 110 no 0.000000 1 0.000000 0.000000 1.000000 27.000000 psaA gene psaA psaA 39150 41402 -1 2253 LSC 0.001775 9 0 300 95 no 0.500000 4 0.750000 0.001775 1.000000 41.200000 IGS_039 igs psaA|ycf3 psaA-ycf3 41403 42100 0 698 LSC 0.007736 15 3 197 257 yes 1.000000 6 1.000000 0.007750 1.000000 65.200000 ycf3 gene ycf3 ycf3 42101 44144 -1 2044 LSC 0.002584 12 11 113 190 no 1.000000 6 1.000000 0.002130 0.995597 53.500000 IGS_040 igs ycf3|trnS ycf3-trnS 44145 44383 0 239 LSC 0.001395 1 0 83 165 no 0.166667 2 0.500000 0.001395 1.000000 29.300000 trnS tRNA trnS trnS 44384 44470 1 87 LSC 0.000000 0 0 48 78 no 0.000000 1 0.000000 0.000000 1.000000 22.400000 IGS_041 igs trnS|rps4 trnS-rps4 44471 44751 0 281 LSC 0.014524 9 6 135 57 no 0.500000 4 0.750000 0.014749 0.982206 45.000000 rps4 gene rps4 rps4 44752 45357 -1 606 LSC 0.002200 4 0 35 76 no 0.333333 3 0.666667 0.002200 1.000000 35.700000 IGS_042 igs rps4|BZJ73_gt016 rps4-BZJ73_gt016 45358 45759 0 402 LSC 0.005656 6 17 215 115 no 0.333333 3 0.666667 0.005705 0.957711 43.900000 BZJ73_gt016 tRNA BZJ73_gt016 BZJ73_gt016 45760 45832 -1 73 LSC 0.000000 0 0 4 42 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_043 igs BZJ73_gt016|trnL BZJ73_gt016-trnL 45833 46638 0 806 LSC 0.012106 25 4 77 108 yes 1.000000 6 1.000000 0.012116 0.997519 59.400000 trnL_part1 tRNA trnL trnL 46639 46673 1 35 LSC 0.000000 0 0 10 73 no 0.000000 1 0.000000 0.000000 1.000000 19.500000 trnL_part2 tRNA trnL trnL 46986 47035 1 50 LSC 0.006667 1 0 238 3 no 0.166667 2 0.500000 0.006667 1.000000 27.600000 IGS_046 igs trnL|trnF trnL-trnF 47036 47386 0 351 LSC 0.011776 10 0 32 83 no 0.333333 4 0.500000 0.011776 1.000000 37.300000 trnF tRNA trnF trnF 47387 47459 1 73 LSC 0.000000 0 0 20 10 no 0.000000 1 0.000000 0.000000 1.000000 19.500000 IGS_047 igs trnF|ndhJ trnF-ndhJ 47460 48044 0 585 LSC 0.004909 8 6 93 228 no 0.666667 5 0.800000 0.004939 0.993162 49.100000 ndhJ gene ndhJ ndhJ 48045 48521 -1 477 LSC 0.001817 2 0 87 300 no 0.333333 3 0.666667 0.001817 1.000000 36.600000 IGS_048 igs ndhJ|ndhK ndhJ-ndhK 48522 48623 0 102 LSC 0.000000 0 0 38 300 no 0.000000 1 0.000000 0.000000 1.000000 21.600000 ndhK gene ndhK ndhK 48624 49301 -1 678 LSC 0.000492 1 0 140 59 no 0.166667 2 0.500000 0.000492 1.000000 33.000000 IGS_049 igs ndhK|ndhC ndhK-ndhC 49302 49364 0 63 LSC 0.005291 1 1 80 9 no 0.333333 3 0.666667 0.005308 1.000000 31.900000 ndhC gene ndhC ndhC 49365 49727 -1 363 LSC 0.003306 3 0 3 28 no 0.333333 3 0.666667 0.003306 1.000000 29.100000 IGS_050 igs ndhC|trnV ndhC-trnV 49728 50609 0 882 LSC 0.011187 25 234 89 165 yes 1.000000 6 1.000000 0.011253 0.962585 63.000000 trnV_part2 tRNA trnV trnV 50610 50644 -1 35 LSC 0.000000 0 0 80 130 no 0.000000 1 0.000000 0.000000 1.000000 24.800000 trnV_part1 tRNA trnV trnV 51258 51296 -1 39 LSC 0.000000 0 0 300 27 no 0.000000 1 0.000000 0.000000 1.000000 20.800000 IGS_053 igs trnV|trnM trnV-trnM 51297 51480 0 184 LSC 0.010145 4 0 300 89 no 0.666667 5 0.800000 0.010145 1.000000 45.200000 trnM tRNA trnM trnM 51481 51553 1 73 LSC 0.000000 0 0 7 16 no 0.000000 1 0.000000 0.000000 1.000000 19.300000 IGS_054 igs trnM|atpE trnM-atpE 51554 51700 0 147 LSC 0.013605 3 59 80 300 no 0.666667 5 0.800000 0.004551 0.605442 41.000000 atpE gene atpE atpE 51701 52099 -1 399 LSC 0.000000 0 0 46 300 no 0.000000 1 0.000000 0.000000 1.000000 24.300000 atpB gene atpB atpB 52096 53592 -1 1497 LSC 0.001870 7 0 300 68 no 1.000000 6 1.000000 0.001870 1.000000 50.300000 IGS_056 igs atpB|rbcL atpB-rbcL 53593 54385 0 793 LSC 0.004540 9 8 71 65 no 1.000000 6 1.000000 0.004555 1.000000 53.300000 rbcL gene rbcL rbcL 54386 55825 1 1440 LSC 0.002454 10 0 277 115 no 1.000000 6 1.000000 0.002454 1.000000 54.300000 IGS_057 igs rbcL|accD rbcL-accD 55826 56505 0 680 LSC 0.008456 16 20 135 12 yes 1.000000 6 1.000000 0.007966 0.994118 54.700000 accD gene accD accD 56506 57969 1 1464 LSC 0.005100 18 18 137 59 no 1.000000 6 1.000000 0.004511 0.987705 53.100000 IGS_058 igs accD|psaI accD-psaI 57970 58629 0 660 LSC 0.006061 10 155 11 121 no 1.000000 6 1.000000 0.005881 0.766667 47.700000 psaI gene psaI psaI 58630 58743 1 114 LSC 0.000000 0 0 175 7 no 0.000000 1 0.000000 0.000000 1.000000 19.300000 IGS_059 igs psaI|ycf4 psaI-ycf4 58744 59161 0 418 LSC 0.012281 13 0 289 65 no 0.500000 4 0.750000 0.012281 1.000000 44.900000 ycf4 gene ycf4 ycf4 59162 59716 1 555 LSC 0.001802 3 0 67 9 no 0.166667 2 0.500000 0.001802 1.000000 29.300000 IGS_060 igs ycf4|cemA ycf4-cemA 59717 60186 0 470 LSC 0.008794 11 0 15 12 no 1.000000 6 1.000000 0.008794 1.000000 48.800000 cemA gene cemA cemA 60187 60876 1 690 LSC 0.000773 1 0 201 215 no 0.000000 2 0.000000 0.000773 1.000000 40.500000 IGS_061 igs cemA|petA cemA-petA 60877 61101 0 225 LSC 0.001481 1 0 300 197 no 0.166667 2 0.500000 0.001481 1.000000 37.900000 petA gene petA petA 61102 62064 1 963 LSC 0.002838 7 0 9 0 no 0.333333 3 0.666667 0.002838 1.000000 33.400000 IGS_062 igs petA|psbJ petA-psbJ 62065 63015 0 951 LSC 0.014667 28 10 75 64 yes 1.000000 6 1.000000 0.011809 0.991588 59.800000 psbJ gene psbJ psbJ 63016 63138 -1 123 LSC 0.002710 1 0 14 124 no 0.166667 2 0.500000 0.002710 1.000000 25.200000 IGS_063 igs psbJ|psbL psbJ-psbL 63139 63285 0 147 LSC 0.002331 1 4 58 18 no 0.333333 3 0.666667 0.002331 0.972789 30.600000 psbL gene psbL psbL 63286 63402 -1 117 LSC 0.004558 1 0 22 258 no 0.000000 2 0.000000 0.004558 1.000000 23.500000 IGS_064 igs psbL|psbF psbL-psbF 63403 63423 0 21 LSC 0.000000 0 0 98 237 no 0.000000 1 0.000000 0.000000 1.000000 26.100000 psbF gene psbF psbF 63424 63543 -1 120 LSC 0.000000 0 0 119 117 no 0.000000 1 0.000000 0.000000 1.000000 27.500000 IGS_065 igs psbF|psbE psbF-psbE 63544 63552 0 9 LSC 0.000000 0 0 239 108 no 0.000000 1 0.000000 NA 1.000000 26.900000 psbE gene psbE psbE 63553 63804 -1 252 LSC 0.001323 1 0 248 19 no 0.166667 2 0.500000 0.001323 1.000000 24.400000 IGS_066 igs psbE|petL psbE-petL 63805 64744 0 940 LSC 0.009362 20 7 143 56 yes 1.000000 6 1.000000 0.008397 0.997872 55.700000 petL gene petL petL 64745 64840 1 96 LSC 0.003472 1 0 67 23 no 0.166667 2 0.500000 0.003472 1.000000 26.500000 IGS_067 igs petL|petG petL-petG 64841 65027 0 187 LSC 0.011765 6 0 39 167 no 0.333333 3 0.666667 0.011765 1.000000 37.200000 petG gene petG petG 65028 65141 1 114 LSC 0.000000 0 0 9 53 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 IGS_068 igs petG|trnW petG-trnW 65142 65260 0 119 LSC 0.002801 1 0 123 229 no 0.166667 2 0.500000 0.002801 1.000000 33.400000 trnW tRNA trnW trnW 65261 65334 -1 74 LSC 0.000000 0 0 65 155 no 0.000000 1 0.000000 0.000000 1.000000 23.600000 IGS_069 igs trnW|trnP trnW-trnP 65335 65521 0 187 LSC 0.013191 5 0 139 140 no 0.333333 3 0.666667 0.013191 1.000000 44.700000 trnP tRNA trnP trnP 65522 65595 -1 74 LSC 0.000000 0 0 13 66 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_070 igs trnP|psaJ trnP-psaJ 65596 65935 0 340 LSC 0.002941 3 8 87 199 no 1.000000 6 1.000000 0.002991 0.982353 49.600000 psaJ gene psaJ psaJ 65936 66064 1 129 LSC 0.000000 0 0 1 70 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_071 igs psaJ|rpl33 psaJ-rpl33 66065 66500 0 436 LSC 0.007034 8 1 130 61 no 0.666667 5 0.800000 0.007042 1.000000 44.400000 rpl33 gene rpl33 rpl33 66501 66701 1 201 LSC 0.003317 2 0 83 58 no 0.333333 3 0.666667 0.003317 1.000000 32.100000 IGS_072 igs rpl33|rps18 rpl33-rps18 66702 66925 0 224 LSC 0.001488 1 0 121 268 no 0.166667 2 0.500000 0.001488 1.000000 32.200000 rps18 gene rps18 rps18 66926 67231 1 306 LSC 0.001089 1 0 165 141 no 0.166667 2 0.500000 0.001089 1.000000 33.500000 IGS_073 igs rps18|rpl20 rps18-rpl20 67232 67521 0 290 LSC 0.003460 3 9 37 300 no 0.500000 4 0.750000 0.003537 0.972414 36.700000 rpl20 gene rpl20 rpl20 67522 67875 -1 354 LSC 0.000000 0 0 9 175 no 0.000000 1 0.000000 0.000000 1.000000 20.600000 IGS_074 igs rpl20|rps12 rpl20-rps12 67876 68658 0 783 LSC 0.005061 11 20 300 178 yes 0.666667 5 0.800000 0.005063 0.975734 57.100000 rps12_part1 gene rps12 rps12 68659 68772 -1 114 LSC 0.000000 0 0 31 64 no 0.000000 1 0.000000 0.000000 1.000000 21.100000 IGS_075 igs rps12|clpP rps12-clpP 68773 68955 0 183 LSC 0.006557 3 0 145 130 no 0.333333 3 0.666667 0.006557 1.000000 39.700000 clpP gene clpP clpP 68956 71031 -1 2076 LSC 0.003643 19 21 96 112 no 1.000000 6 1.000000 0.003657 0.993738 53.500000 IGS_076 igs clpP|psbB clpP-psbB 71032 71523 0 492 LSC 0.003930 5 0 100 267 no 0.666667 5 0.800000 0.003930 1.000000 45.800000 psbB gene psbB psbB 71524 73050 1 1527 LSC 0.002532 11 0 20 11 no 0.500000 4 0.750000 0.002532 1.000000 37.200000 IGS_077 igs psbB|psbT psbB-psbT 73051 73242 0 192 LSC 0.014236 7 0 149 111 no 0.333333 3 0.666667 0.014236 1.000000 44.300000 psbT gene psbT psbT 73243 73344 1 102 LSC 0.000000 0 0 90 9 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 IGS_078 igs psbT|psbN psbT-psbN 73345 73409 0 65 LSC 0.028718 4 0 192 133 no 0.166667 3 0.333333 0.028718 1.000000 52.500000 psbN gene psbN psbN 73410 73541 -1 132 LSC 0.000000 0 0 0 1 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_079 igs psbN|psbH psbN-psbH 73542 73645 0 104 LSC 0.006410 2 0 132 237 no 0.333333 3 0.666667 0.006410 1.000000 40.200000 psbH gene psbH psbH 73646 73867 1 222 LSC 0.000000 0 0 12 15 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_080 igs psbH|petB psbH-petB 73868 74001 0 134 LSC 0.002488 1 0 234 19 no 0.166667 2 0.500000 0.002488 1.000000 25.400000 petB gene petB petB 74002 75517 1 1516 LSC 0.003005 12 76 118 29 no 0.666667 5 0.800000 0.003035 0.960422 46.700000 IGS_081 igs petB|petD petB-petD 75518 75720 0 203 LSC 0.004950 3 6 156 72 no 0.333333 3 0.666667 0.004976 0.995074 37.900000 petD gene petD petD 75721 76908 1 1188 LSC 0.002974 10 2 171 90 no 0.666667 5 0.800000 0.002975 1.000000 46.800000 IGS_082 igs petD|rpoA petD-rpoA 76909 77114 0 206 LSC 0.012298 5 7 16 240 no 0.500000 4 0.750000 0.007996 0.966019 41.000000 rpoA gene rpoA rpoA 77115 78098 -1 984 LSC 0.003591 10 0 4 258 no 0.666667 5 0.800000 0.003591 1.000000 40.700000 IGS_083 igs rpoA|rps11 rpoA-rps11 78099 78167 0 69 LSC 0.000000 0 0 47 189 no 0.000000 1 0.000000 0.000000 1.000000 22.300000 rps11 gene rps11 rps11 78168 78584 -1 417 LSC 0.002878 3 0 116 69 no 0.500000 4 0.750000 0.002878 1.000000 37.900000 IGS_084 igs rps11|rpl36 rps11-rpl36 78585 78694 0 110 LSC 0.003030 1 0 9 3 no 0.166667 2 0.500000 0.003030 1.000000 24.600000 rpl36 gene rpl36 rpl36 78695 78808 -1 114 LSC 0.002924 1 0 40 149 no 0.166667 2 0.500000 0.002924 1.000000 27.300000 IGS_085 igs rpl36|rps8 rpl36-rps8 78809 79288 0 480 LSC 0.014815 15 6 110 93 yes 1.000000 6 1.000000 0.012911 0.989583 60.000000 rps8 gene rps8 rps8 79289 79693 -1 405 LSC 0.003292 4 0 24 15 no 0.666667 5 0.800000 0.003292 1.000000 37.300000 IGS_086 igs rps8|rpl14 rps8-rpl14 79694 79937 0 244 LSC 0.010370 7 25 125 9 no 0.666667 5 0.800000 0.010524 0.913934 43.000000 rpl14 gene rpl14 rpl14 79938 80306 -1 369 LSC 0.003794 3 0 4 71 no 0.333333 3 0.666667 0.003794 1.000000 29.500000 IGS_087 igs rpl14|rpl16 rpl14-rpl16 80307 80424 0 118 LSC 0.007345 2 0 110 150 no 0.333333 3 0.666667 0.007345 1.000000 38.700000 rpl16 gene rpl16 rpl16 80425 81931 -1 1507 LSC 0.004910 19 1 7 49 no 1.000000 6 1.000000 0.004913 0.999336 48.100000 IGS_088 igs rpl16|rps3 rpl16-rps3 81932 82111 0 180 LSC 0.009249 4 8 43 42 no 0.666667 5 0.800000 0.008487 0.961111 45.400000 rps3 gene rps3 rps3 82112 82768 -1 657 LSC 0.002841 5 0 20 151 no 0.500000 4 0.750000 0.002841 1.000000 38.100000 rpl22 gene rpl22 rpl22 82753 83235 -1 483 LSC 0.004141 6 0 76 38 no 0.333333 3 0.666667 0.004141 1.000000 35.100000 IGS_090 igs rpl22|rps19 rpl22-rps19 83236 83290 0 55 LSC 0.006061 1 1 32 189 no 0.333333 3 0.666667 0.006083 1.000000 34.600000 rps19 gene rps19 rps19 83291 83569 -1 279 LSC 0.001195 1 0 16 116 no 0.166667 2 0.500000 0.001195 1.000000 24.100000 IGS_091 igs rps19|rpl2 rps19-rpl2 83570 83623 0 54 IRb 0.000000 0 0 89 62 no 0.000000 1 0.000000 0.000000 1.000000 23.400000 rpl2 gene rpl2 rpl2 83624 85130 -1 1507 IRb 0.000708 2 0 143 300 no 0.000000 2 0.000000 0.000708 1.000000 36.200000 IGS_092 igs rpl2|rpl23 rpl2-rpl23 85131 85148 0 18 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 85149 85430 -1 282 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_093 igs rpl23|trnI rpl23-trnI 85431 85598 0 168 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_094 igs trnI|ycf2 trnI-ycf2 85673 85760 0 88 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 ycf2 gene ycf2 ycf2 85761 92648 1 6888 IRb 0.000736 14 9 300 300 no 0.666667 5 0.800000 0.000736 1.000000 47.000000 IGS_095 igs ycf2|trnL ycf2-trnL 92649 93581 0 933 IRb 0.000000 0 23 300 300 no 0.166667 2 0.500000 0.000000 0.975348 45.300000 IGS_096 igs trnL|ndhB trnL-ndhB 93663 94243 0 581 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 39.600000 ndhB gene ndhB ndhB 94244 96459 -1 2216 IRb 0.000391 2 0 300 42 no 0.166667 3 0.333333 0.000391 1.000000 30.100000 IGS_097 igs ndhB|rps7 ndhB-rps7 96460 96771 0 312 IRb 0.004487 3 5 67 300 no 0.500000 4 0.750000 0.004512 1.000000 38.500000 rps7 gene rps7 rps7 96772 97239 -1 468 IRb 0.000000 0 0 32 300 no 0.000000 1 0.000000 0.000000 1.000000 24.600000 IGS_098 igs rps7|rps12 rps7-rps12 97240 97292 0 53 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps12_part2 gene rps12 rps12 97293 98087 -1 795 IRb 0.000000 0 0 300 237 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_099 igs rps12|trnV rps12-trnV 98088 99996 0 1909 IRb 0.000806 4 6 300 252 no 0.333333 3 0.666667 0.000806 0.996857 46.300000 IGS_100 igs trnV|rrn16S trnV-rrn16S 100069 100299 0 231 IRb 0.002886 2 0 300 300 no 0.333333 3 0.666667 0.002886 1.000000 42.400000 rrn16S rRNA rrn16S rrn16S 100300 101790 1 1491 IRb 0.000000 0 0 38 300 no 0.000000 1 0.000000 0.000000 1.000000 27.800000 IGS_101 igs rrn16S|trnI rrn16S-trnI 101791 102013 0 223 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI_part1 tRNA trnI trnI 102014 102050 1 37 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI_part2 tRNA trnI trnI 102860 102894 1 35 IRb 0.000000 0 0 56 300 no 0.000000 1 0.000000 0.000000 1.000000 22.900000 IGS_104 igs trnI|trnA trnI-trnA 102895 102958 0 64 IRb 0.000000 0 0 91 300 no 0.000000 1 0.000000 0.000000 1.000000 25.600000 trnA_part1 tRNA trnA trnA 102959 102996 1 38 IRb 0.000000 0 0 155 300 no 0.000000 1 0.000000 0.000000 1.000000 30.400000 trnA_part2 tRNA trnA trnA 103786 103820 1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_107 igs trnA|rrn23S trnA-rrn23S 103821 103972 0 152 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn23S rRNA rrn23S rrn23S 103973 106782 1 2810 IRb 0.000119 1 0 300 300 no 0.166667 2 0.500000 0.000119 1.000000 40.500000 IGS_108 igs rrn23S|rrn4.5S rrn23S-rrn4.5S 106783 106880 0 98 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn4.5S rRNA rrn4.5S rrn4.5S 106881 106983 1 103 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_109 igs rrn4.5S|trnR rrn4.5S-trnR 106984 107590 0 607 IRb 0.000000 0 1 300 223 no 0.000000 2 0.000000 0.000000 0.998353 40.200000 trnR tRNA trnR trnR 107591 107664 1 74 IRb 0.000000 0 0 300 149 no 0.000000 1 0.000000 0.000000 1.000000 29.900000 IGS_110 igs trnR|trnN trnR-trnN 107665 108280 0 616 IRb 0.003463 5 10 300 300 yes 0.666667 5 0.800000 0.003489 0.998377 56.900000 trnN tRNA trnN trnN 108281 108352 -1 72 IRb 0.000000 0 0 4 300 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_111 igs trnN|ycf1 trnN-ycf1 108353 108672 0 320 IRb 0.000000 0 0 76 300 no 0.000000 1 0.000000 0.000000 1.000000 24.900000 ycf1 gene ycf1 ycf1 108673 109713 1 1041 IRb 0.000512 1 0 300 174 no 0.000000 2 0.000000 0.000512 1.000000 38.400000 ndhF gene ndhF ndhF 109675 111915 -1 2241 SSC 0.003808 22 0 300 68 no 1.000000 6 1.000000 0.003808 1.000000 50.200000 IGS_113 igs ndhF|rpl32 ndhF-rpl32 111916 112769 0 854 SSC 0.019342 39 20 56 55 yes 1.000000 6 1.000000 0.017070 0.977752 64.400000 rpl32 gene rpl32 rpl32 112770 112928 1 159 SSC 0.010482 5 0 73 8 no 0.333333 3 0.666667 0.010482 1.000000 34.200000 IGS_114 igs rpl32|trnL rpl32-trnL 112929 113618 0 690 SSC 0.017120 29 91 6 96 yes 1.000000 6 1.000000 0.016987 0.879710 59.100000 IGS_115 igs trnL|ccsA trnL-ccsA 113699 113811 0 113 SSC 0.004762 1 1 118 156 no 0.333333 3 0.666667 0.004762 0.991150 37.900000 ccsA gene ccsA ccsA 113812 114798 1 987 SSC 0.004931 12 0 96 160 yes 1.000000 6 1.000000 0.004931 1.000000 54.700000 IGS_116 igs ccsA|ndhD ccsA-ndhD 114799 115026 0 228 SSC 0.004630 3 12 122 300 no 0.500000 4 0.750000 0.004630 0.947368 45.200000 ndhD gene ndhD ndhD 115027 116529 -1 1503 SSC 0.003194 12 0 51 112 no 0.666667 5 0.800000 0.003194 1.000000 43.800000 IGS_117 igs ndhD|psaC ndhD-psaC 116530 116685 0 156 SSC 0.004274 2 0 56 24 no 0.166667 2 0.500000 0.004274 1.000000 27.200000 psaC gene psaC psaC 116686 116931 -1 246 SSC 0.003523 2 0 9 57 no 0.166667 3 0.333333 0.003523 1.000000 25.200000 IGS_118 igs psaC|ndhE psaC-ndhE 116932 117169 0 238 SSC 0.004202 3 0 167 300 no 0.333333 3 0.666667 0.004202 1.000000 41.000000 ndhE gene ndhE ndhE 117170 117475 -1 306 SSC 0.001743 1 0 98 49 no 0.000000 2 0.000000 0.001743 1.000000 23.700000 IGS_119 igs ndhE|ndhG ndhE-ndhG 117476 117735 0 260 SSC 0.018718 10 32 5 164 no 0.500000 4 0.750000 0.012870 0.876923 43.900000 ndhG gene ndhG ndhG 117736 118266 -1 531 SSC 0.002511 4 0 4 67 no 0.166667 2 0.500000 0.002511 1.000000 29.100000 IGS_120 igs ndhG|ndhI ndhG-ndhI 118267 118591 0 325 SSC 0.007385 6 1 86 13 no 0.666667 5 0.800000 0.007406 0.996923 38.700000 ndhI gene ndhI ndhI 118592 119095 -1 504 SSC 0.002646 4 0 65 53 no 0.333333 3 0.666667 0.002646 1.000000 35.400000 IGS_121 igs ndhI|ndhA ndhI-ndhA 119096 119179 0 84 SSC 0.003968 1 0 12 54 no 0.166667 2 0.500000 0.003968 1.000000 26.000000 ndhA gene ndhA ndhA 119180 121336 -1 2157 SSC 0.005164 28 12 30 16 no 1.000000 6 1.000000 0.005177 0.999536 48.200000 IGS_122 igs ndhA|ndhH ndhA-ndhH 121337 121337 0 1 SSC 0.000000 0 0 13 15 no 0.000000 1 0.000000 NA 1.000000 19.700000 ndhH gene ndhH ndhH 121338 122519 -1 1182 SSC 0.002707 9 0 14 40 no 0.500000 4 0.750000 0.002707 1.000000 37.600000 IGS_123 igs ndhH|rps15 ndhH-rps15 122520 122622 0 103 SSC 0.005178 1 0 62 7 no 0.000000 2 0.000000 0.005178 1.000000 22.800000 rps15 gene rps15 rps15 122623 122889 -1 267 SSC 0.001248 1 0 62 32 no 0.166667 2 0.500000 0.001248 1.000000 25.300000 IGS_124 igs rps15|ycf1 rps15-ycf1 122890 123233 0 344 SSC 0.005098 4 14 259 300 no 0.333333 3 0.666667 0.005157 0.988372 49.200000 ycf1 gene ycf1 ycf1 123234 128561 -1 5328 SSC 0.007015 92 12 9 300 yes 1.000000 6 1.000000 0.007022 0.997748 43.700000 IGS_125 igs ycf1|trnN ycf1-trnN 128562 128881 0 320 IRa 0.000000 0 0 300 76 no 0.000000 1 0.000000 0.000000 1.000000 24.900000 trnN tRNA trnN trnN 128882 128953 1 72 IRa 0.000000 0 0 300 4 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_126 igs trnN|trnR trnN-trnR 128954 129569 0 616 IRa 0.004004 6 10 300 300 yes 0.666667 5 0.800000 0.004034 0.995130 57.300000 trnR tRNA trnR trnR 129570 129643 -1 74 IRa 0.000000 0 0 149 300 no 0.000000 1 0.000000 0.000000 1.000000 29.900000 IGS_127 igs trnR|BZJ73_gr004 trnR-BZJ73_gr004 129644 129882 0 239 IRa 0.000000 0 1 223 300 no 0.000000 2 0.000000 0.000000 0.995816 34.100000 BZJ73_gr004 rRNA BZJ73_gr004 BZJ73_gr004 129883 130003 -1 121 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_128 igs BZJ73_gr004|BZJ73_gr003 BZJ73_gr004-BZJ73_gr003 130004 130250 0 247 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 BZJ73_gr003 rRNA BZJ73_gr003 BZJ73_gr003 130251 130353 -1 103 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_129 igs BZJ73_gr003|BZJ73_gr002 BZJ73_gr003-BZJ73_gr002 130354 130451 0 98 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 BZJ73_gr002 rRNA BZJ73_gr002 BZJ73_gr002 130452 133261 -1 2810 IRa 0.000119 1 0 300 300 no 0.166667 2 0.500000 0.000119 1.000000 40.500000 IGS_130 igs BZJ73_gr002|trnA BZJ73_gr002-trnA 133262 133413 0 152 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA_part2 tRNA trnA trnA 133414 133448 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA_part1 tRNA trnA trnA 134238 134275 -1 38 IRa 0.000000 0 0 300 155 no 0.000000 1 0.000000 0.000000 1.000000 30.400000 IGS_133 igs trnA|trnI trnA-trnI 134276 134339 0 64 IRa 0.000000 0 0 300 91 no 0.000000 1 0.000000 0.000000 1.000000 25.600000 trnI_part2 tRNA trnI trnI 134340 134374 -1 35 IRa 0.000000 0 0 300 56 no 0.000000 1 0.000000 0.000000 1.000000 22.900000 trnI_part1 tRNA trnI trnI 135184 135220 -1 37 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_136 igs trnI|BZJ73_gr001 trnI-BZJ73_gr001 135221 135443 0 223 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 BZJ73_gr001 rRNA BZJ73_gr001 BZJ73_gr001 135444 136934 -1 1491 IRa 0.000000 0 0 300 38 no 0.000000 1 0.000000 0.000000 1.000000 27.800000 IGS_137 igs BZJ73_gr001|BZJ73_gt035 BZJ73_gr001-BZJ73_gt035 136935 137165 0 231 IRa 0.002886 2 0 300 300 no 0.333333 3 0.666667 0.002886 1.000000 42.400000 BZJ73_gt035 tRNA BZJ73_gt035 BZJ73_gt035 137166 137237 -1 72 IRa 0.000000 0 0 180 300 no 0.000000 1 0.000000 0.000000 1.000000 32.200000 IGS_138 igs BZJ73_gt035|rps12 BZJ73_gt035-rps12 137238 139146 0 1909 IRa 0.000806 4 6 252 300 no 0.333333 3 0.666667 0.000806 0.996857 46.300000 rps12_part2 gene rps12 rps12 139147 139941 1 795 IRa 0.000000 0 0 237 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_139 igs rps12|rps7 rps12-rps7 139942 139994 0 53 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps7 gene rps7 rps7 139995 140462 1 468 IRa 0.000000 0 0 300 32 no 0.000000 1 0.000000 0.000000 1.000000 24.600000 IGS_140 igs rps7|ndhB rps7-ndhB 140463 140774 0 312 IRa 0.004487 3 5 300 67 no 0.500000 4 0.750000 0.004512 1.000000 38.500000 ndhB gene ndhB ndhB 140775 142990 1 2216 IRa 0.000391 2 0 42 300 no 0.166667 3 0.333333 0.000391 1.000000 30.100000 IGS_141 igs ndhB|trnL ndhB-trnL 142991 143571 0 581 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 39.600000 IGS_142 igs trnL|ycf2 trnL-ycf2 143653 144585 0 933 IRa 0.000000 0 23 300 300 no 0.166667 2 0.500000 0.000000 0.975348 45.300000 ycf2 gene ycf2 ycf2 144586 151473 -1 6888 IRa 0.000736 14 9 300 300 no 0.666667 5 0.800000 0.000736 1.000000 47.000000 IGS_143 igs ycf2|trnI ycf2-trnI 151474 151561 0 88 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_144 igs trnI|rpl23 trnI-rpl23 151636 151803 0 168 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl23 gene rpl23 rpl23 151804 152085 1 282 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_145 igs rpl23|rpl2 rpl23-rpl2 152086 152103 0 18 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl2 gene rpl2 rpl2 152104 153610 1 1507 IRa 0.000708 2 0 300 143 no 0.000000 2 0.000000 0.000708 1.000000 36.200000 IGS_146 igs rpl2|trnH rpl2-trnH 153611 117 0 284 IRa 0.002582 2 114 62 114 no 0.333333 3 0.666667 0.002270 1.000000 35.900000