primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score ycf1_p1 ycf1 1 TAGCAGAGACCTGGGATAGC CAATGGGGAATTTGCCGAAC 20 20 55.0 50.0 58.0 58.0 0.0 0.4 0.011257 110147 110266 758-758 0.500000 59.9 ycf1_p2 ycf1 2 ACGGATACTAAGATGCCCGA CAATGGGGAATTTGCCGAAC 20 20 50.0 50.0 58.0 58.0 0.0 0.4 0.017631 110147 110266 1101-1101 0.500000 59.9 ycf1_p3 ycf1 3 TAGCAGAGACCTGGGATAGC AATGGGGAATTTGCCGAACT 20 20 55.0 45.0 58.0 58.1 0.0 0.4 0.065314 110147 110266 757-757 0.500000 59.5 ycf1_p4 ycf1 4 TAGCAGAGACCTGGGATAGC ATGGGGAATTTGCCGAACTT 20 20 55.0 45.0 58.0 58.1 0.0 0.4 0.065314 110147 110266 756-756 0.500000 59.5 ycf1_p5 ycf1 5 ACGGATACTAAGATGCCCGA ATGGGGAATTTGCCGAACTT 20 20 50.0 45.0 58.0 58.1 0.0 0.4 0.071688 110147 110266 1099-1099 0.500000 59.4 ycf1-rps15_p1 ycf1-rps15 1 AGCCGAGTTTCACATGACAA CCTGAGTCAGTCTTCCATGC 20 20 45.0 55.0 57.7 58.0 0.0 18.7 0.275901 113275 113700 1000-1000 0.500000 57.8 ycf1-rps15_p2 ycf1-rps15 2 AGCCGAGTTTCACATGACAA AGTCGTTGACGTTTTCCCAA 20 20 45.0 45.0 57.7 58.0 0.0 3.2 0.281549 113275 113700 809-809 0.500000 57.7 ycf1-rps15_p3 ycf1-rps15 3 AGCCGAGTTTCACATGACAA AACACCATGCATTGATGGGT 20 20 45.0 45.0 57.7 58.1 0.0 8.9 0.313169 113275 113700 1083-1083 0.500000 57.5 ycf1-rps15_p4 ycf1-rps15 4 AGCCGAGTTTCACATGACAA ATATTGCCCAGCTGTTCAGG 20 20 45.0 50.0 57.7 57.9 0.0 13.8 0.317516 113275 113700 1283-1283 0.500000 57.5 ycf1-rps15_p5 ycf1-rps15 5 AGCCGAGTTTCACATGACAA CCAGCTGTTCAGGTCCATTT 20 20 45.0 50.0 57.7 58.1 0.0 13.8 0.339405 113275 113700 1276-1276 0.500000 57.3 ndhH_p1 ndhH 1 GCATGGAAGACTGACTCAGG ATGTCTCACCGAATCACACG 20 20 55.0 50.0 58.0 58.0 10.9 0.0 0.025064 114088 115269 1783-1783 0.500000 59.8 ndhH_p2 ndhH 2 TTGGGAAAACGTCAACGACT ATGTCTCACCGAATCACACG 20 20 45.0 50.0 58.0 58.0 9.9 0.0 0.030712 114088 115269 1974-1974 0.500000 59.8 ndhH_p3 ndhH 3 ATCTCAGAAAGGTTTGCGCA ATGTCTCACCGAATCACACG 20 20 45.0 50.0 58.1 58.0 5.7 0.0 0.107489 114088 115269 1999-1999 0.500000 59.1 ndhH_p4 ndhH 4 ACGTCAACGACTACTAGCCT ATGTCTCACCGAATCACACG 20 20 50.0 50.0 58.2 58.0 9.9 0.0 0.185066 114088 115269 1966-1966 0.500000 58.5 ndhH_p5 ndhH 5 GCATGGAAGACTGACTCAGG AAGAATTCCCAAAGGACCCG 20 20 55.0 50.0 58.0 57.8 10.9 0.6 0.237297 114088 115269 1430-1430 0.500000 58.1 ndhA_p1 ndhA 1 AGAGTCGAAGCACCAAAAGG CGTGGGACAGGGTAATCATG 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.162206 115271 117373 2479-2479 0.500000 58.7 ndhA_p2 ndhA 2 AGTCGAAGCACCAAAAGGAG CGTGGGACAGGGTAATCATG 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.162206 115271 117373 2477-2477 0.500000 58.7 ndhA_p3 ndhA 3 GAGTCGAAGCACCAAAAGGA CGTGGGACAGGGTAATCATG 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.167488 115271 117373 2478-2478 0.500000 58.7 ndhA_p4 ndhA 4 GTCGAAGCACCAAAAGGAGA CGTGGGACAGGGTAATCATG 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.167488 115271 117373 2476-2476 0.500000 58.7 ndhA_p5 ndhA 5 TGATCGGGGATCAGAGTGTT CGTGGGACAGGGTAATCATG 20 20 50.0 55.0 58.1 58.0 4.3 0.0 0.180426 115271 117373 2442-2442 0.500000 58.6 ndhI_p1 ndhI 1 ACGGTTCTGTAATAGCGACG CCCAACGGTCCAAAGATGAA 20 20 50.0 50.0 57.8 58.1 0.0 0.0 0.280098 117454 117960 1825-1825 0.500000 57.8 ndhI_p2 ndhI 2 GTGACCTATGAGGAGCCGTA CCCAACGGTCCAAAGATGAA 20 20 55.0 50.0 58.3 58.1 0.0 0.0 0.406941 117454 117960 1864-1864 0.500000 56.7 ndhI_p3 ndhI 3 ACGGTTCTGTAATAGCGACG AATCCCAATGAAAAGGCCGA 20 20 50.0 45.0 57.8 57.8 0.0 0.0 0.414514 117454 117960 1659-1659 0.500000 56.7 ndhI_p4 ndhI 4 ACGGTTCTGTAATAGCGACG ATCCCAATGAAAAGGCCGAA 20 20 50.0 45.0 57.8 57.8 0.0 0.0 0.414514 117454 117960 1658-1658 0.500000 56.7 ndhI_p5 ndhI 5 ACGGTTCTGTAATAGCGACG TCCCAATGAAAAGGCCGAAT 20 20 50.0 45.0 57.8 57.8 0.0 0.0 0.414514 117454 117960 1657-1657 0.500000 56.7 ndhI-ndhG_p1 ndhI-ndhG 1 CATGATTACCCTGTCCCACG CCCAACGGTCCAAAGATGAA 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.142154 117961 118322 1080-1080 0.500000 58.9 ndhI-ndhG_p2 ndhI-ndhG 2 ACATCAGAACGTTTCCGAGG CCCAACGGTCCAAAGATGAA 20 20 50.0 50.0 57.9 58.1 0.5 0.0 0.175999 117961 118322 1013-1013 0.500000 58.6 ndhI-ndhG_p3 ndhI-ndhG 3 TCAAATTGCTTTAGGCCGGT CCCAACGGTCCAAAGATGAA 20 20 45.0 50.0 58.1 58.1 1.9 0.0 0.177841 117961 118322 744-744 0.500000 58.6 ndhI-ndhG_p4 ndhI-ndhG 4 ACAAACAATACGAGCTGCCA CCCAACGGTCCAAAGATGAA 20 20 45.0 50.0 58.1 58.1 0.0 0.0 0.204837 117961 118322 1119-1119 0.500000 58.4 ndhI-ndhG_p5 ndhI-ndhG 5 CTTGAACTCCGGTCGACAAA CCCAACGGTCCAAAGATGAA 20 20 50.0 50.0 58.1 58.1 18.9 0.0 0.235037 117961 118322 1134-1134 0.500000 58.1 ndhG_p1 ndhG 1 ACATCAGAACGTTTCCGAGG CCACGATCATAGCTTACCCG 20 20 50.0 55.0 57.9 57.9 0.5 0.0 0.146279 118323 118853 1857-1857 0.500000 58.8 ndhG_p2 ndhG 2 TCAAATTGCTTTAGGCCGGT CCACGATCATAGCTTACCCG 20 20 45.0 55.0 58.1 57.9 1.9 0.0 0.148121 118323 118853 1588-1588 0.500000 58.8 ndhG_p3 ndhG 3 GAGGCCGAATCCACTTTGAA CCACGATCATAGCTTACCCG 20 20 50.0 55.0 58.2 57.9 0.0 0.0 0.244776 118323 118853 1841-1841 0.500000 58.0 ndhG_p4 ndhG 4 ATTGCTTTAGGCCGGTTACC CCACGATCATAGCTTACCCG 20 20 50.0 55.0 58.2 57.9 1.9 0.0 0.307056 118323 118853 1584-1584 0.500000 57.5 ndhG_p5 ndhG 5 ACATCAGAACGTTTCCGAGG CCGATCCAATAGCTGCTTCA 20 20 50.0 50.0 57.9 57.8 0.5 7.8 0.325445 118323 118853 1699-1699 0.500000 57.4 ndhE_p1 ndhE 1 TTCATCTTTGGACCGTTGGG CCACGATCATAGCTTACCCG 20 20 50.0 55.0 58.1 57.9 0.0 0.0 0.161706 119062 119367 864-864 0.500000 58.7 ndhE_p2 ndhE 2 TTCATCTTTGGACCGTTGGG ATACGCTTGGGCCAGAAAAA 20 20 50.0 45.0 58.1 58.1 0.0 6.2 0.177841 119062 119367 1382-1382 0.500000 58.6 ndhE_p3 ndhE 3 TTCATCTTTGGACCGTTGGG ACCTCTTACAACCAACGCAG 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.216760 119062 119367 1191-1191 0.500000 58.3 ndhE_p4 ndhE 4 TTCATCTTTGGACCGTTGGG CTAATACATCGGTGGGGCAC 20 20 50.0 55.0 58.1 58.1 0.0 0.0 0.216760 119062 119367 1110-1110 0.500000 58.3 ndhE_p5 ndhE 5 TTCATCTTTGGACCGTTGGG CCTTGGGGCAGAAGCTATTT 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.245686 119062 119367 1163-1163 0.500000 58.0 ndhE-psaC_p1 ndhE-psaC 1 TGAAGCAGCTATTGGATCGG ATACGCTTGGGCCAGAAAAA 20 20 50.0 45.0 57.8 58.1 0.0 6.2 0.327287 119368 119621 696-696 0.500000 57.4 ndhE-psaC_p2 ndhE-psaC 2 TGAAGCAGCTATTGGATCGG ACCTCTTACAACCAACGCAG 20 20 50.0 50.0 57.8 58.1 0.0 0.0 0.366206 119368 119621 505-505 0.500000 57.1 ndhE-psaC_p3 ndhE-psaC 3 TGAAGCAGCTATTGGATCGG CTAATACATCGGTGGGGCAC 20 20 50.0 55.0 57.8 58.1 0.0 0.0 0.366206 119368 119621 424-424 0.500000 57.1 ndhE-psaC_p4 ndhE-psaC 4 TGAAGCAGCTATTGGATCGG GAGAATCTCGAGTAACCGGC 20 20 50.0 55.0 57.8 57.9 0.0 13.1 0.367722 119368 119621 1042-1042 0.500000 57.1 ndhE-psaC_p5 ndhE-psaC 5 TGAAGCAGCTATTGGATCGG CCTTGGGGCAGAAGCTATTT 20 20 50.0 50.0 57.8 57.9 0.0 0.0 0.395132 119368 119621 477-477 0.500000 56.8 ndhD_p1 ndhD 1 CGGGTAAGCTATGATCGTGG CTAATGAAGCATGGGGGTCC 20 20 55.0 55.0 57.9 58.0 0.0 0.0 0.079110 119985 121487 2501-2501 0.500000 59.4 ndhD_p2 ndhD 2 CGGGTAAGCTATGATCGTGG GAAGCATGGGGGTCCTATTG 20 20 55.0 55.0 57.9 58.0 0.0 0.0 0.079110 119985 121487 2496-2496 0.500000 59.4 ndhD_p3 ndhD 3 TTTTTCTGGCCCAAGCGTAT CTAATGAAGCATGGGGGTCC 20 20 45.0 55.0 58.1 58.0 0.0 0.0 0.095246 119985 121487 1983-1983 0.500000 59.2 ndhD_p4 ndhD 4 TTTTTCTGGCCCAAGCGTAT GAAGCATGGGGGTCCTATTG 20 20 45.0 55.0 58.1 58.0 0.0 0.0 0.095246 119985 121487 1978-1978 0.500000 59.2 ndhD_p5 ndhD 5 CTGCGTTGGTTGTAAGAGGT GAAGCATGGGGGTCCTATTG 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.134165 119985 121487 2169-2169 0.500000 58.9 ccsA_p1 ccsA 1 AACGGGGCCCTTTTACAAAT TAGACACGCTGCTCTTAGGA 20 20 45.0 50.0 58.0 57.9 24.4 0.0 0.142632 121700 122671 1880-1880 0.500000 58.9 ccsA_p2 ccsA 2 AACGGGGCCCTTTTACAAAT ACAAGCCGCTATGGTGAAAT 20 20 45.0 45.0 58.0 57.9 24.4 0.0 0.147126 121700 122671 1903-1903 0.500000 58.8 ccsA_p3 ccsA 3 AACGGGGCCCTTTTACAAAT AAATTGGTAGACACGCTGCT 20 20 45.0 45.0 58.0 57.8 24.4 0.0 0.203359 121700 122671 1887-1887 0.500000 58.4 ccsA_p4 ccsA 4 AACGGGGCCCTTTTACAAAT GGTAGACACGCTGCTCTTAG 20 20 45.0 55.0 58.0 57.8 24.4 0.0 0.214650 121700 122671 1882-1882 0.500000 58.3 ccsA_p5 ccsA 5 AACGGGGCCCTTTTACAAAT GTAGACACGCTGCTCTTAGG 20 20 45.0 55.0 58.0 57.8 24.4 0.0 0.214650 121700 122671 1881-1881 0.500000 58.3 ccsA-trnL-UAG_p1 ccsA-trnL-UAG 1 AACCACTCGGATTGAAGAGC TAGACACGCTGCTCTTAGGA 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.224882 122672 122787 584-584 0.500000 58.2 ccsA-trnL-UAG_p2 ccsA-trnL-UAG 2 AACCACTCGGATTGAAGAGC ACAAGCCGCTATGGTGAAAT 20 20 50.0 45.0 57.9 57.9 0.0 0.0 0.229375 122672 122787 607-607 0.500000 58.2 ccsA-trnL-UAG_p3 ccsA-trnL-UAG 3 AACCACTCGGATTGAAGAGC AAATTGGTAGACACGCTGCT 20 20 50.0 45.0 57.9 57.8 0.0 0.0 0.285609 122672 122787 591-591 0.500000 57.7 ccsA-trnL-UAG_p4 ccsA-trnL-UAG 4 AACCACTCGGATTGAAGAGC GGTAGACACGCTGCTCTTAG 20 20 50.0 55.0 57.9 57.8 0.0 0.0 0.296900 122672 122787 586-586 0.500000 57.6 ccsA-trnL-UAG_p5 ccsA-trnL-UAG 5 AACCACTCGGATTGAAGAGC GTAGACACGCTGCTCTTAGG 20 20 50.0 55.0 57.9 57.8 0.0 0.0 0.296900 122672 122787 585-585 0.500000 57.6 trnL-UAG-rpl32_p1 trnL-UAG-rpl32 1 AACCACTCGGATTGAAGAGC CGGCGTTAAAAGCGTTTTCT 20 20 50.0 45.0 57.9 58.0 0.0 2.2 0.127520 122868 123627 1455-1455 0.500000 59.0 trnL-UAG-rpl32_p2 trnL-UAG-rpl32 2 TCCTAAGAGCAGCGTGTCTA CGGCGTTAAAAGCGTTTTCT 20 20 50.0 45.0 57.9 58.0 0.0 2.2 0.151192 122868 123627 891-891 0.500000 58.8 trnL-UAG-rpl32_p3 trnL-UAG-rpl32 3 AGCAGCGTGTCTACCAATTT CGGCGTTAAAAGCGTTTTCT 20 20 45.0 45.0 57.8 58.0 0.0 2.2 0.211919 122868 123627 884-884 0.500000 58.3 trnL-UAG-rpl32_p4 trnL-UAG-rpl32 4 CCTAAGAGCAGCGTGTCTAC CGGCGTTAAAAGCGTTTTCT 20 20 55.0 45.0 57.8 58.0 0.0 2.2 0.223210 122868 123627 890-890 0.500000 58.2 trnL-UAG-rpl32_p5 trnL-UAG-rpl32 5 CTAAGAGCAGCGTGTCTACC CGGCGTTAAAAGCGTTTTCT 20 20 55.0 45.0 57.8 58.0 0.0 2.2 0.223210 122868 123627 889-889 0.500000 58.2 rpl32_p1 rpl32 1 GCTGGGGGAAATAAGACTCC GCCCACATACGACGAAGATT 20 20 55.0 50.0 57.6 58.1 0.0 0.0 0.414125 123628 123798 1019-1019 0.500000 56.7 rpl32_p2 rpl32 2 CACTAAGCGTTTTTGCGTGA GCCCACATACGACGAAGATT 20 20 45.0 50.0 57.6 58.1 0.0 0.0 0.440982 123628 123798 1154-1154 0.500000 56.5 rpl32_p3 rpl32 3 GCTGGGGGAAATAAGACTCC AAAAGCCCACATACGACGAA 20 20 55.0 45.0 57.6 57.8 0.0 0.0 0.522908 123628 123798 1023-1023 0.500000 55.8 rpl32_p4 rpl32 4 GCTGGGGGAAATAAGACTCC TGGAAAAGCCCACATACGAC 20 20 55.0 50.0 57.6 58.2 0.0 0.0 0.533983 123628 123798 1026-1026 0.500000 55.7 rpl32_p5 rpl32 5 TGCGTGAATTGATGGTGAGA GCCCACATACGACGAAGATT 20 20 45.0 50.0 57.5 58.1 0.0 0.0 0.535051 123628 123798 1141-1141 0.500000 55.7 rpl32-ndhF_p1 rpl32-ndhF 1 AGAAAACGCTTTTAACGCCG GCCCACATACGACGAAGATT 20 20 45.0 50.0 58.0 58.1 0.0 0.0 0.090982 123799 124276 699-699 0.500000 59.3 rpl32-ndhF_p2 rpl32-ndhF 2 AGAAAACGCTTTTAACGCCG AAAAGCCCACATACGACGAA 20 20 45.0 45.0 58.0 57.8 0.0 0.0 0.199766 123799 124276 703-703 0.500000 58.4 rpl32-ndhF_p3 rpl32-ndhF 3 AGAAAACGCTTTTAACGCCG TGGAAAAGCCCACATACGAC 20 20 45.0 50.0 58.0 58.2 0.0 0.0 0.210840 123799 124276 706-706 0.500000 58.3 rpl32-ndhF_p4 rpl32-ndhF 4 AGAAAACGCTTTTAACGCCG AAAGCCCACATACGACGAAG 20 20 45.0 50.0 58.0 58.3 0.0 0.0 0.304904 123799 124276 702-702 0.500000 57.6 rpl32-ndhF_p5 rpl32-ndhF 5 AGAAAACGCTTTTAACGCCG GAAAAGCCCACATACGACGA 20 20 45.0 50.0 58.0 58.3 0.0 0.0 0.309721 123799 124276 704-704 0.500000 57.5 ndhF_p1 ndhF 1 AGAAAACGCTTTTAACGCCG GGCGGATCCGAACAAAATTG 20 20 45.0 50.0 58.0 58.1 0.0 37.6 0.118850 124277 126508 2967-2967 0.500000 59.0 ndhF_p2 ndhF 2 AGAAAACGCTTTTAACGCCG AAGGCGGATCCGAACAAAAT 20 20 45.0 45.0 58.0 58.2 0.0 37.6 0.192727 124277 126508 2969-2969 0.500000 58.5 ndhF_p3 ndhF 3 AGAAAACGCTTTTAACGCCG AGGCGGATCCGAACAAAATT 20 20 45.0 45.0 58.0 58.2 0.0 37.6 0.192727 124277 126508 2968-2968 0.500000 58.5 ndhF_p4 ndhF 4 AGAAAACGCTTTTAACGCCG GAAGAAAAGGCGGATCCGAA 20 20 45.0 50.0 58.0 58.3 0.0 37.6 0.292752 124277 126508 2975-2975 0.500000 57.7 ndhF_p5 ndhF 5 AGAAAACGCTTTTAACGCCG AAAGGCGGATCCGAACAAAA 20 20 45.0 45.0 58.0 58.4 0.0 37.6 0.415396 124277 126508 2970-2970 0.500000 56.7