primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 CGTTGCTTTCTACCACATCG TAAGGCACCGAGTTTTGGTC 20 20 50.0 50.0 57.2 58.1 0.0 0.0 0.900836 3827 4694 963-991 1.000000 82.8 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 CGTTGCTTTCTACCACATCG GTTTTGGTCTCGCTAGTCGA 20 20 50.0 50.0 57.2 57.7 0.0 8.6 1.130632 3827 4694 952-980 1.000000 81.1 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 CGTTGCTTTCTACCACATCG AGTTTTGGTCTCGCTAGTCG 20 20 50.0 50.0 57.2 57.7 0.0 0.0 1.137020 3827 4694 953-981 1.000000 81.0 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 CGTTGCTTTCTACCACATCG CGAGTTTTGGTCTCGCTAGT 20 20 50.0 50.0 57.2 57.7 0.0 2.6 1.137020 3827 4694 955-983 1.000000 81.0 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 CGTTGCTTTCTACCACATCG AAATTAAAATGGGGCGTGGC 20 20 50.0 45.0 57.2 57.6 0.0 0.0 1.182652 3827 4694 990-1018 1.000000 80.3 trnQ-UUG-trnS-GCU_p1 trnQ-UUG-trnS-GCU 1 GACCAAAACTCGGTGCCTTA TTATTCGTACCGAGGGTTCG 20 20 50.0 50.0 58.1 57.2 0.0 7.4 0.962994 4767 5304 611-1181 1.000000 80.2 trnQ-UUG-trnS-GCU_p2 trnQ-UUG-trnS-GCU 2 TCGACTAGCGAGACCAAAAC TTATTCGTACCGAGGGTTCG 20 20 50.0 50.0 57.7 57.2 0.0 7.4 1.192790 4767 5304 622-1192 1.000000 78.4 trnQ-UUG-trnS-GCU_p3 trnQ-UUG-trnS-GCU 3 GACCAAAACTCGGTGCCTTA GGGTTCGAATCCCTCTCTTT 20 20 50.0 50.0 58.1 56.9 0.0 17.2 1.195668 4767 5304 598-1168 1.000000 78.4 trnQ-UUG-trnS-GCU_p4 trnQ-UUG-trnS-GCU 4 GACCAAAACTCGGTGCCTTA GGTTCGAATCCCTCTCTTTCC 20 21 50.0 52.4 58.1 58.1 0.0 0.0 1.205479 4767 5304 597-1167 1.000000 78.4 trnQ-UUG-trnS-GCU_p5 trnQ-UUG-trnS-GCU 5 CGACTAGCGAGACCAAAACT TTATTCGTACCGAGGGTTCG 20 20 50.0 50.0 57.7 57.2 0.0 7.4 1.199178 4767 5304 621-1191 1.000000 78.3 trnS-GCU-trnR-UCU_p1 trnS-GCU-trnR-UCU 1 CCAACGCTTTAGTCCACTCA GGCTTAGAAGACCTCTGTCC 20 20 50.0 55.0 57.8 57.0 0.0 0.0 1.135478 5392 6188 869-1411 1.000000 81.9 trnS-GCU-trnR-UCU_p2 trnS-GCU-trnR-UCU 2 AACGCTTTAGTCCACTCAGC GGCTTAGAAGACCTCTGTCC 20 20 50.0 55.0 58.2 57.0 2.0 0.0 1.174635 5392 6188 867-1409 1.000000 81.6 trnS-GCU-trnR-UCU_p3 trnS-GCU-trnR-UCU 3 GCTTTAGTCCACTCAGCCAT GGCTTAGAAGACCTCTGTCC 20 20 50.0 55.0 57.6 57.0 0.9 0.0 1.381608 5392 6188 864-1406 1.000000 79.9 trnS-GCU-trnR-UCU_p4 trnS-GCU-trnR-UCU 4 TCCAACGCTTTAGTCCACTC GGCTTAGAAGACCTCTGTCC 20 20 50.0 55.0 57.5 57.0 0.0 0.0 1.422269 5392 6188 870-1412 1.000000 79.6 trnS-GCU-trnR-UCU_p5 trnS-GCU-trnR-UCU 5 AGTCCACTCAGCCATCTCTC GGCTTAGAAGACCTCTGTCC 20 20 55.0 55.0 58.5 57.0 0.0 0.0 1.487622 5392 6188 859-1401 1.000000 79.1 atpH-atpI_p1 atpH-atpI 1 AACGGAAGCAGCAGAAATCA GAGTTAGCCGCACCTACAAA 20 20 45.0 50.0 58.1 57.9 0.0 0.0 0.192730 9773 10305 923-932 1.000000 86.2 atpH-atpI_p2 atpH-atpI 2 AGCCAATCCAGCAGCAATAA GAGTTAGCCGCACCTACAAA 20 20 45.0 50.0 57.9 57.9 0.0 0.0 0.237395 9773 10305 941-950 1.000000 85.7 atpH-atpI_p3 atpH-atpI 3 GCCAATCCAGCAGCAATAAC GAGTTAGCCGCACCTACAAA 20 20 50.0 50.0 57.8 57.9 0.0 0.0 0.303337 9773 10305 940-949 1.000000 85.2 atpH-atpI_p4 atpH-atpI 4 AACGGAAGCAGCAGAAATCA ATCCACAAACCATTCCGACC 20 20 45.0 50.0 58.1 58.2 0.0 0.0 0.269592 9773 10305 1120-1129 1.000000 84.5 atpH-atpI_p5 atpH-atpI 5 AGCAGTTCCTTGACCAATCC GAGTTAGCCGCACCTACAAA 20 20 50.0 50.0 57.8 57.9 0.0 0.0 0.295526 9773 10305 995-995 0.333333 51.0 trnC-GCA-trnD-GUC_p1 trnC-GCA-trnD-GUC 1 CCAGTTCAAATCCGGGTGTC CCTGTCAAGGCGGAAGTTG 20 19 55.0 57.9 58.8 58.8 0.0 0.0 2.586940 12453 13428 1043-2287 1.000000 67.1 trnC-GCA-trnD-GUC_p2 trnC-GCA-trnD-GUC 2 CAGTTCAAATCCGGGTGTCG CCTGTCAAGGCGGAAGTTG 20 19 55.0 57.9 59.2 58.8 0.0 0.0 2.955898 12453 13428 1042-2286 1.000000 64.1 trnC-GCA-trnD-GUC_p3 trnC-GCA-trnD-GUC 3 AGTTCAAATCCGGGTGTCG CCTGTCAAGGCGGAAGTTG 19 19 52.6 57.9 57.8 58.8 0.0 0.0 2.979094 12453 13428 1041-2285 1.000000 64.0 trnC-GCA-trnD-GUC_p4 trnC-GCA-trnD-GUC 4 CCAGTTCAAATCCGGGTGTC TGTCAAGGCGGAAGTTGC 20 18 55.0 55.6 58.8 58.3 0.0 0.0 3.090171 12453 13428 1041-2285 1.000000 63.1 trnC-GCA-trnD-GUC_p5 trnC-GCA-trnD-GUC 5 CCAGTTCAAATCCGGGTGT CCTGTCAAGGCGGAAGTTG 19 19 52.6 57.9 57.7 58.8 0.0 0.0 3.091757 12453 13428 1043-2287 1.000000 63.1 trnT-GGU-trnS-UGA_p1 trnT-GGU-trnS-UGA 1 GGTAAGGCGTAGGTCATTGG GAGAAGCAAATACGACGGGT 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.056505 14468 15968 1332-2767 1.000000 91.5 trnT-GGU-trnS-UGA_p2 trnT-GGU-trnS-UGA 2 GTGGTAGAGTAACGCCATGG GAGAAGCAAATACGACGGGT 20 20 55.0 50.0 58.1 58.0 7.6 0.0 0.070038 14468 15968 1350-2785 1.000000 91.4 trnT-GGU-trnS-UGA_p3 trnT-GGU-trnS-UGA 3 TCAGTGGTAGAGTAACGCCA GAGAAGCAAATACGACGGGT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.092193 14468 15968 1353-2788 1.000000 91.3 trnT-GGU-trnS-UGA_p4 trnT-GGU-trnS-UGA 4 AAGGCGTAGGTCATTGGTTC GAGAAGCAAATACGACGGGT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.115395 14468 15968 1329-2764 1.000000 91.1 trnT-GGU-trnS-UGA_p5 trnT-GGU-trnS-UGA 5 GGTAAGGCGTAGGTCATTGG TCTATTTGTGCAGTGTCGGG 20 20 55.0 50.0 58.1 57.9 0.0 0.0 0.143841 14468 15968 1613-2276 0.666667 73.9 trnS-UGA-trnG-UCC_p1 trnS-UGA-trnG-UCC 1 AACCTCTCAGCCATCTCTCC TGGCAAAGAGAAATTTTACCA 20 21 55.0 33.3 58.5 53.9 0.0 0.0 5.628415 16055 16762 753-788 1.000000 49.4 trnS-UGA-trnG-UCC_p2 trnS-UGA-trnG-UCC 2 AACCTCTCAGCCATCTCTCC TTGGCAAAGAGAAATTTTACCA 20 22 55.0 31.8 58.5 54.7 0.0 0.0 5.787702 16055 16762 754-789 1.000000 49.4 trnS-UGA-trnG-UCC_p3 trnS-UGA-trnG-UCC 3 AACCTCTCAGCCATCTCTCC TGGCAAAGAGAAATTTTACCAT 20 22 55.0 31.8 58.5 54.5 0.0 0.0 6.007144 16055 16762 753-788 1.000000 49.4 trnS-UGA-trnG-UCC_p4 trnS-UGA-trnG-UCC 4 AACCTCTCAGCCATCTCTCC TGGCAAAGAGAAATTTTACCATT 20 23 55.0 30.4 58.5 55.3 0.0 0.0 6.227410 16055 16762 753-788 1.000000 49.4 trnS-UGA-trnG-UCC_p5 trnS-UGA-trnG-UCC 5 AACCTCTCAGCCATCTCTCC TTGGCAAAGAGAAATTTTACCAT 20 23 55.0 30.4 58.5 55.3 0.0 0.0 6.227410 16055 16762 754-789 1.000000 49.4 trnfM-CAU-rps14_p1 trnfM-CAU-rps14 1 AAGGTTATGAGCCTTGCGAG GCATGTTTGTTACCAGGAGC 20 20 50.0 50.0 58.0 57.4 0.0 0.0 0.666606 17085 17232 220-230 1.000000 86.7 trnfM-CAU-rps14_p2 trnfM-CAU-rps14 2 GATGTTGCGGAGACAGGATT GCATGTTTGTTACCAGGAGC 20 20 50.0 50.0 58.0 57.4 0.0 0.0 0.666606 17085 17232 255-265 1.000000 85.8 trnfM-CAU-rps14_p3 trnfM-CAU-rps14 3 CCAAACTACTCTACTCCGCG GCATGTTTGTTACCAGGAGC 20 20 55.0 50.0 57.8 57.4 0.0 0.0 0.827093 17085 17232 197-207 1.000000 85.4 trnfM-CAU-rps14_p4 trnfM-CAU-rps14 4 TGCGGAGACAGGATTTGAAC GCATGTTTGTTACCAGGAGC 20 20 50.0 50.0 58.2 57.4 0.0 0.0 0.828357 17085 17232 250-260 1.000000 84.7 trnfM-CAU-rps14_p5 trnfM-CAU-rps14 5 AAAGATGTTGCGGAGACAGG GCATGTTTGTTACCAGGAGC 20 20 50.0 50.0 58.2 57.4 0.0 0.0 0.823255 17085 17232 258-268 1.000000 84.4 rps14-trnS-GGA_p1 rps14-trnS-GGA 1 TGCCTCTTCTTTTCCTTCTGA TTCCAATGCTACGCCTTGAA 21 20 42.9 45.0 56.9 57.8 0.0 5.6 2.337743 17536 19731 1260-2288 1.000000 73.3 rps14-trnS-GGA_p2 rps14-trnS-GGA 2 TGCCTCTTCTTTTCCTTCTGAA TTCCAATGCTACGCCTTGAA 22 20 40.9 45.0 57.6 57.8 0.0 5.6 2.630345 17536 19731 1260-2288 1.000000 71.0 rps14-trnS-GGA_p3 rps14-trnS-GGA 3 TTGCCTCTTCTTTTCCTTCTGA TTCCAATGCTACGCCTTGAA 22 20 40.9 45.0 57.6 57.8 0.0 5.6 2.630345 17536 19731 1261-2289 1.000000 71.0 rps14-trnS-GGA_p4 rps14-trnS-GGA 4 TGCCTCTTCTTTTCCTTCTGA TCCAATGCTACGCCTTGAAC 21 20 42.9 50.0 56.9 58.6 0.0 5.6 2.696095 17536 19731 1259-2287 1.000000 70.4 rps14-trnS-GGA_p5 rps14-trnS-GGA 5 TGCCTCTTCTTTTCCTTCTG TTCCAATGCTACGCCTTGAA 20 20 45.0 45.0 55.3 57.8 0.0 5.6 2.920867 17536 19731 1260-2288 1.000000 68.6 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG CCGTAGCGTCTACCGATTTC 20 20 55.0 55.0 57.9 58.2 0.0 10.2 0.381189 20999 21382 445-480 1.000000 88.1 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG CGTCTACCGATTTCGCCATA 20 20 55.0 50.0 57.9 57.6 0.0 0.0 0.543526 20999 21382 439-474 1.000000 86.9 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GCGATGCTCTAACCTCTGAG CGTAGCGTCTACCGATTTCG 20 20 55.0 55.0 57.9 58.6 0.0 10.2 0.749620 20999 21382 444-479 1.000000 85.2 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GCGATGCTCTAACCTCTGAG TCCGTAGCGTCTACCGATTT 20 20 55.0 50.0 57.9 58.6 0.0 10.2 0.750218 20999 21382 446-481 1.000000 85.2 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 ATGCGATGCTCTAACCTCTG CCGTAGCGTCTACCGATTTC 20 20 50.0 55.0 57.5 58.2 0.0 10.2 0.771284 20999 21382 447-482 1.000000 85.0 trnF-GAA-trnM-CAU_p1 trnF-GAA-trnM-CAU 1 ATGGTCGGGATAGCTCAGTT CCCGCCGTATGAAAGCAATA 20 20 50.0 50.0 58.2 58.4 0.0 0.0 0.616612 22401 22829 548-1552 1.000000 79.2 trnF-GAA-trnM-CAU_p2 trnF-GAA-trnM-CAU 2 AATGGTCGGGATAGCTCAGT CCCGCCGTATGAAAGCAATA 20 20 50.0 50.0 58.2 58.4 0.0 0.0 0.616612 22401 22829 549-1553 1.000000 79.1 trnF-GAA-trnM-CAU_p3 trnF-GAA-trnM-CAU 3 AATGGTCGGGATAGCTCAGT CCGCCGTATGAAAGCAATAC 20 20 50.0 50.0 58.2 57.3 0.0 0.0 0.868565 22401 22829 548-1552 1.000000 77.1 trnF-GAA-trnM-CAU_p4 trnF-GAA-trnM-CAU 4 ATGGTCGGGATAGCTCAGTT CCGCCGTATGAAAGCAATAC 20 20 50.0 50.0 58.2 57.3 0.0 0.0 0.868565 22401 22829 547-1551 1.000000 77.1 trnF-GAA-trnM-CAU_p5 trnF-GAA-trnM-CAU 5 TCGGGATAGCTCAGTTGGTA CCCGCCGTATGAAAGCAATA 20 20 50.0 50.0 57.6 58.4 0.0 0.0 0.858734 22401 22829 544-1548 0.666667 63.6 trnM-CAU-atpB_p1 trnM-CAU-atpB 1 GCGGGAGTCATTGGTTCAAA GATGAAGCTATTGCGAAAG 20 19 50.0 42.1 58.8 52.1 0.0 0.0 7.649564 22902 23535 673-701 1.000000 50.8 trnM-CAU-atpB_p2 trnM-CAU-atpB 2 GCGGGAGTCATTGGTTCAA GATGAAGCTATTGCGAAAG 19 19 52.6 42.1 58.1 52.1 0.0 0.0 7.952256 22902 23535 673-701 1.000000 50.8 trnM-CAU-atpB_p3 trnM-CAU-atpB 3 CTTTCATACGGCGGGAGTC GATGAAGCTATTGCGAAAG 19 19 57.9 42.1 58.0 52.1 13.2 0.0 7.920046 22902 23535 683-711 1.000000 50.6 trnM-CAU-atpB_p4 trnM-CAU-atpB 4 TATTGCTTTCATACGGCGGG GATGAAGCTATTGCGAAAG 20 19 50.0 42.1 58.4 52.1 13.2 0.0 7.304792 22902 23535 688-716 1.000000 50.5 trnM-CAU-atpB_p5 trnM-CAU-atpB 5 GTATTGCTTTCATACGGCGG GATGAAGCTATTGCGAAAG 20 19 50.0 42.1 57.3 52.1 13.2 0.0 7.556745 22902 23535 689-717 1.000000 50.5 clpP-rpl36_p1 clpP-rpl36 1 AAAGGCCAGGGAGTGCTATA ATCGGGAAGCTCGACTAGAA 20 20 50.0 50.0 58.1 57.9 5.0 0.0 0.160917 32728 34352 2477-2484 0.666667 73.5 clpP-rpl36_p2 clpP-rpl36 2 GCCTTTGACCCTCGTATAGC ATCGGGAAGCTCGACTAGAA 20 20 55.0 50.0 58.1 57.9 0.0 0.0 0.187066 32728 34352 2385-2392 0.666667 73.3 clpP-rpl36_p3 clpP-rpl36 3 CCTAGTCCAATCGCAAGCTT ATCGGGAAGCTCGACTAGAA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.084070 32728 34352 2362-2362 0.333333 52.7 clpP-rpl36_p4 clpP-rpl36 4 GGTAGTGACCTCTGCCTTTG ATCGGGAAGCTCGACTAGAA 20 20 55.0 50.0 57.9 57.9 0.0 0.0 0.154837 32728 34352 2405-2405 0.333333 52.1 clpP-rpl36_p5 clpP-rpl36 5 CCTAGTCCAATCGCAAGCTT AGTCGACCTGGTCTACGAAT 20 20 50.0 50.0 58.0 57.9 0.0 23.5 0.155611 32728 34352 2465-2465 0.333333 52.1 trnA-UGC_p1 trnA-UGC 1 GACCTCGAGCACAGGTTTAG ATTCGGGAATCTCCGGATCT 20 20 55.0 50.0 58.0 58.0 7.0 3.6 0.019236 54977 55852 920-1610 0.666667 71.4 trnA-UGC_p2 trnA-UGC 2 GACCTCGAGCACAGGTTTAG TCGAAAGGTTGCCCTATTCG 20 20 55.0 50.0 58.0 58.0 7.0 14.3 0.020873 54977 55852 935-1625 0.666667 71.4 trnA-UGC_p3 trnA-UGC 3 GACCTCGAGCACAGGTTTAG CTCCCACAACCCCGTTTTAA 20 20 55.0 50.0 58.0 58.0 7.0 0.0 0.018265 54977 55852 1082-1772 0.666667 71.3 trnA-UGC_p4 trnA-UGC 4 TGATTTCCTTCACGAGCGAG CTCCCACAACCCCGTTTTAA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.019643 54977 55852 1436-1436 0.333333 53.2 trnA-UGC_p5 trnA-UGC 5 TGATTTCCTTCACGAGCGAG ATTCGGGAATCTCCGGATCT 20 20 50.0 50.0 58.0 58.0 0.0 3.6 0.020613 54977 55852 1274-1274 0.333333 53.2 trnL-UAG-rps15_p1 trnL-UAG-rps15 1 TAGACACGCTGCTCTTAGGA TCTCAGATAGGTTTGCGCAA 20 20 50.0 45.0 57.9 57.2 0.0 21.0 0.884912 61782 64046 1650-2533 1.000000 84.9 trnL-UAG-rps15_p2 trnL-UAG-rps15 2 ACAAGCCGCTATGGTGAAAT TCTCAGATAGGTTTGCGCAA 20 20 45.0 45.0 57.9 57.2 0.0 21.0 0.889405 61782 64046 1673-2556 1.000000 84.9 trnL-UAG-rps15_p3 trnL-UAG-rps15 3 AAATTGGTAGACACGCTGCT TCTCAGATAGGTTTGCGCAA 20 20 45.0 45.0 57.8 57.2 0.0 21.0 0.945639 61782 64046 1657-2540 1.000000 84.4 trnL-UAG-rps15_p4 trnL-UAG-rps15 4 GGTAGACACGCTGCTCTTAG TCTCAGATAGGTTTGCGCAA 20 20 55.0 45.0 57.8 57.2 0.0 21.0 0.956929 61782 64046 1652-2535 1.000000 84.3 trnL-UAG-rps15_p5 trnL-UAG-rps15 5 GTAGACACGCTGCTCTTAGG TCTCAGATAGGTTTGCGCAA 20 20 55.0 45.0 57.8 57.2 0.0 21.0 0.956929 61782 64046 1651-2534 1.000000 84.3 rps15-rps12_p1 rps15-rps12 1 CTCCCACAACCCCGTTTTAA GGCTGTCAAGAACGTAGAGG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.018265 74213 74812 1141-1141 0.333333 53.2 rps15-rps12_p2 rps15-rps12 2 CTCCCACAACCCCGTTTTAA GGGCTGTCAAGAACGTAGAG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.018265 74213 74812 1142-1142 0.333333 53.2 rps15-rps12_p3 rps15-rps12 3 ATTCGGGAATCTCCGGATCT GGCTGTCAAGAACGTAGAGG 20 20 50.0 55.0 58.0 58.0 3.6 0.0 0.019236 74213 74812 979-979 0.333333 53.2 rps15-rps12_p4 rps15-rps12 4 ATTCGGGAATCTCCGGATCT GGGCTGTCAAGAACGTAGAG 20 20 50.0 55.0 58.0 58.0 3.6 0.0 0.019236 74213 74812 980-980 0.333333 53.2 rps15-rps12_p5 rps15-rps12 5 CTCCCACAACCCCGTTTTAA TGATTTCCTTCACGAGCGAG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.019643 74213 74812 1436-1436 0.333333 53.2