primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG TTCCCTCTAGACCTAGCTGC 20 20 55.0 55.0 58.1 57.9 0.0 0.0 0.203648 74 414 393-408 1.000000 82.9 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 CAATCCACTGCCTTGATCCA TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.208010 74 414 407-422 1.000000 82.7 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 AATCCACTGCCTTGATCCAC TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.209518 74 414 406-421 1.000000 82.7 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 ACAATCCACTGCCTTGATCC TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.209518 74 414 408-423 1.000000 82.7 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 GATCCACTTGGCTACATCCG CAACCGTGCTAACCTTGGTA 20 20 55.0 50.0 58.1 57.8 0.0 0.0 0.301771 74 414 445-460 1.000000 81.6 trnK-UUU_p1 trnK-UUU 1 TGTTCGTGTCAACCAATACCA AGTTTTGTTTAATCGATATTTTCTCG 21 26 42.9 26.9 57.8 55.2 0.0 0.0 9.947946 1694 4245 2688-2689 1.000000 40.1 trnK-UUU_p2 trnK-UUU 2 TGTTCGTGTCAACCAATACCA GTTTTGTTTAATCGATATTTTCTCG 21 25 42.9 28.0 57.8 54.0 0.0 0.0 10.214305 1694 4245 2687-2688 1.000000 40.1 trnK-UUU_p3 trnK-UUU 3 TGTTCGTGTCAACCAATACCA AAGTTTTGTTTAATCGATATTTTCTCG 21 27 42.9 25.9 57.8 55.9 0.0 0.0 10.328006 1694 4245 2689-2690 1.000000 40.1 trnK-UUU_p4 trnK-UUU 4 TGTTCGTGTCAACCAATACCA TTTTGTTTAATCGATATTTTCTCG 21 24 42.9 25.0 57.8 52.6 0.0 0.0 10.630295 1694 4245 2686-2687 1.000000 40.1 trnK-UUU_p5 trnK-UUU 5 TGTTCGTGTCAACCAATACCA GTTGAAGTTTTGTTTAATCGATAT 21 24 42.9 25.0 57.8 52.4 0.0 0.0 10.745807 1694 4245 2693-2694 1.000000 40.1 rps16_p1 rps16 1 ATATACAAGCCGCTACCCCC CCCGTTCCAAATTAGAGGAATG 20 22 55.0 45.5 59.0 57.1 0.0 14.8 3.918692 4797 5941 1201-1201 1.000000 48.7 rps16_p2 rps16 2 ATATACAAGCCGCTACCCCC CCCGTTCCAAATTAGAGGAA 20 20 55.0 45.0 59.0 55.0 0.0 3.5 3.976112 4797 5941 1201-1201 1.000000 48.3 rps16_p3 rps16 3 ATATACAAGCCGCTACCCCC CCCGTTCCAAATTAGAGGAAT 20 21 55.0 42.9 59.0 55.6 0.0 9.4 4.381596 4797 5941 1201-1201 1.000000 45.0 rps16_p4 rps16 4 TATACAAGCCGCTACCCCC CCCGTTCCAAATTAGAGGAATG 19 22 57.9 45.5 58.6 57.1 0.0 14.8 4.456354 4797 5941 1200-1200 1.000000 44.4 rps16_p5 rps16 5 TATACAAGCCGCTACCCCC CCCGTTCCAAATTAGAGGAA 19 20 57.9 45.0 58.6 55.0 0.0 3.5 4.513774 4797 5941 1200-1200 1.000000 44.0 atpH-atpI_p1 atpH-atpI 1 AACGGAAGCAGCAGAAATCA TCCCTGTCATGTTCCTTGGA 20 20 45.0 50.0 58.1 58.3 0.0 0.0 0.362752 13459 14502 1178-1180 1.000000 77.2 atpH-atpI_p2 atpH-atpI 2 AGCCAATCCAGCAGCAATAA TCCCTGTCATGTTCCTTGGA 20 20 45.0 50.0 57.9 58.3 0.0 0.0 0.407418 13459 14502 1196-1198 1.000000 76.9 atpH-atpI_p3 atpH-atpI 3 GCCAATCCAGCAGCAATAAC TCCCTGTCATGTTCCTTGGA 20 20 50.0 50.0 57.8 58.3 0.0 0.0 0.473359 13459 14502 1195-1197 1.000000 76.3 atpH-atpI_p4 atpH-atpI 4 TCCAGCAGCAATAACGGAAG TCCCTGTCATGTTCCTTGGA 20 20 50.0 50.0 58.3 58.3 0.0 0.0 0.521134 13459 14502 1190-1192 1.000000 76.0 atpH-atpI_p5 atpH-atpI 5 AACGGAAGCAGCAGAAATCA TTTTTGCAACTTTAGCCGCG 20 20 45.0 45.0 58.1 58.5 0.0 0.0 0.621503 13459 14502 1130-1132 1.000000 75.2 atpI_p1 atpI 1 ACATATGCGTTGCTTTGCAC TCCGATTCAAGTAGACAAAGAGA 20 23 45.0 39.1 58.0 57.0 1.6 0.0 3.996236 14503 15246 858-862 1.000000 48.2 atpI_p2 atpI 2 CACATATGCGTTGCTTTGCA TCCGATTCAAGTAGACAAAGAGA 20 23 45.0 39.1 58.0 57.0 1.6 0.0 3.997592 14503 15246 859-863 1.000000 48.2 atpI_p3 atpI 3 CATATGCGTTGCTTTGCACT TCCGATTCAAGTAGACAAAGAGA 20 23 45.0 39.1 57.7 57.0 0.0 0.0 4.244677 14503 15246 857-861 1.000000 46.2 atpI_p4 atpI 4 ATGCGTTGCTTTGCACTAAG TCCGATTCAAGTAGACAAAGAGA 20 23 45.0 39.1 57.7 57.0 0.0 0.0 4.314044 14503 15246 854-858 1.000000 45.7 atpI_p5 atpI 5 TCTTGAGCCACATATGCGTT TCCGATTCAAGTAGACAAAGAGA 20 23 45.0 39.1 57.6 57.0 1.6 0.0 4.379072 14503 15246 867-871 1.000000 45.2 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 AGTTCTTCTGCCAAACCCTG AACAAGCGGGTTTGATTCCT 20 20 50.0 45.0 58.0 58.0 0.0 2.2 0.017741 26822 27953 1586-1597 1.000000 80.9 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 GTTCTTCTGCCAAACCCTGA AACAAGCGGGTTTGATTCCT 20 20 50.0 45.0 58.0 58.0 0.0 2.2 0.023367 26822 27953 1585-1596 1.000000 80.9 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 AGTTCTTCTGCCAAACCCTG AGTAAGAGCCCATTCCCCTT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.026038 26822 27953 1831-1842 1.000000 80.7 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 GTTCTTCTGCCAAACCCTGA AGTAAGAGCCCATTCCCCTT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.031664 26822 27953 1830-1841 1.000000 80.7 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 CCGCCTACACAAGCAAATTG AACAAGCGGGTTTGATTCCT 20 20 50.0 45.0 58.0 58.0 0.0 2.2 0.023370 26822 27953 2186-2197 1.000000 80.6 petN-psbM_p1 petN-psbM 1 TAGTAAGTCTCGCTTGGGCT AGTTCCTACCGCTTTTCTACT 20 21 50.0 42.9 58.2 56.4 0.0 0.0 2.762471 28275 29251 1114-1118 1.000000 58.3 petN-psbM_p2 petN-psbM 2 TAGTAAGTCTCGCTTGGGCT TCATTCTAGTTCCTACCGCT 20 20 50.0 45.0 58.2 55.4 0.0 0.0 2.781070 28275 29251 1121-1125 1.000000 58.1 petN-psbM_p3 petN-psbM 3 TAGTAAGTCTCGCTTGGGCT TCATTCTAGTTCCTACCGCTT 20 21 50.0 42.9 58.2 56.2 0.0 0.0 2.973013 28275 29251 1121-1125 1.000000 56.6 petN-psbM_p4 petN-psbM 4 TAGTAAGTCTCGCTTGGGCT TTCATTCTAGTTCCTACCGCT 20 21 50.0 42.9 58.2 56.2 0.0 0.0 2.973013 28275 29251 1122-1126 1.000000 56.6 petN-psbM_p5 petN-psbM 5 TAGTAAGTCTCGCTTGGGCT AGTTCCTACCGCTTTTCTACTT 20 22 50.0 40.9 58.2 57.1 0.0 0.0 3.037844 28275 29251 1114-1118 1.000000 56.1 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 ACAGAGTGACTCGTTCAGGA GGACCAGCCTACAAAAACGA 20 20 50.0 50.0 58.0 58.1 7.0 0.0 0.130453 30937 32282 1552-1554 1.000000 79.2 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 GTGGTAGAGTAACGCCATGG GGACCAGCCTACAAAAACGA 20 20 55.0 50.0 58.1 58.1 7.6 0.0 0.177181 30937 32282 1504-1506 1.000000 78.8 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 TCAGTGGTAGAGTAACGCCA GGACCAGCCTACAAAAACGA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.199336 30937 32282 1507-1509 1.000000 78.7 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 ACAGAGTGACTCGTTCAGGA ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 58.0 58.2 7.0 0.0 0.263409 30937 32282 1542-1544 1.000000 78.2 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 GTGGTAGAGTAACGCCATGG ACAAAAACGAAACGGTCCCT 20 20 55.0 45.0 58.1 58.2 7.6 0.0 0.310137 30937 32282 1494-1496 1.000000 77.8 trnS-UGA-psbZ_p1 trnS-UGA-psbZ 1 CAACCACTCAGCCATCTCTC CGCAAAAACAGCCAATTGGA 20 20 55.0 45.0 58.0 58.1 0.0 29.0 0.158088 35053 35386 388-393 1.000000 78.9 trnS-UGA-psbZ_p2 trnS-UGA-psbZ 2 CAACCACTCAGCCATCTCTC CCAACCATCAGGAGAAGCAA 20 20 55.0 50.0 58.0 57.8 0.0 0.0 0.226377 35053 35386 454-459 1.000000 78.4 trnS-UGA-psbZ_p3 trnS-UGA-psbZ 3 GTTTTCAAGACCGGGGCTAT CGCAAAAACAGCCAATTGGA 20 20 50.0 45.0 57.9 58.1 0.8 29.0 0.261010 35053 35386 408-413 1.000000 78.1 trnS-UGA-psbZ_p4 trnS-UGA-psbZ 4 CAACCACTCAGCCATCTCTC GACCAACCATCAGGAGAAGC 20 20 55.0 55.0 58.0 58.3 0.0 0.0 0.277359 35053 35386 456-461 1.000000 78.0 trnS-UGA-psbZ_p5 trnS-UGA-psbZ 5 GTTTTCAAGACCGGGGCTAT CCAACCATCAGGAGAAGCAA 20 20 50.0 50.0 57.9 57.8 0.8 0.0 0.329299 35053 35386 474-479 1.000000 77.5 psaA-pafI_p1 psaA-pafI 1 GCCCATTCCTCGAAAGAAGT ATTGGTTGAAGATCACGGGG 20 20 50.0 50.0 57.9 57.9 4.1 0.0 0.244113 41211 41960 853-862 1.000000 78.9 psaA-pafI_p2 psaA-pafI 2 GAAAAATGACCCGGTTTGGC ATTGGTTGAAGATCACGGGG 20 20 50.0 50.0 58.2 57.9 0.0 0.0 0.338015 41211 41960 871-880 1.000000 78.1 psaA-pafI_p3 psaA-pafI 3 GCCCATTCCTCGAAAGAAGT TGGTTTGATCAAGCTGCTGA 20 20 50.0 45.0 57.9 57.7 4.1 19.9 0.390477 41211 41960 926-935 1.000000 77.6 psaA-pafI_p4 psaA-pafI 4 GAAAAATGACCCGGTTTGGC TGGTTTGATCAAGCTGCTGA 20 20 50.0 45.0 58.2 57.7 0.0 19.9 0.484379 41211 41960 944-953 1.000000 76.9 psaA-pafI_p5 psaA-pafI 5 GCCCATTCCTCGAAAGAAGT CGGAGGCTTGGTTTGATCAA 20 20 50.0 50.0 57.9 58.5 4.1 3.4 0.581718 41211 41960 934-943 1.000000 76.1 pafII-cemA_p1 pafII-cemA 1 TGCGCGTACCAATTGAAGTA GAAATCCACCAGGGCAGAAA 20 20 45.0 50.0 57.9 58.1 8.4 0.0 0.158370 60018 60646 721-726 1.000000 79.3 pafII-cemA_p2 pafII-cemA 2 CTTGCGCGTACCAATTGAAG GAAATCCACCAGGGCAGAAA 20 20 50.0 50.0 58.1 58.1 8.4 0.0 0.194446 60018 60646 723-728 1.000000 79.0 pafII-cemA_p3 pafII-cemA 3 GAACAAAAAGCCGCGGAATT GAAATCCACCAGGGCAGAAA 20 20 45.0 50.0 58.2 58.1 33.5 0.0 0.298310 60018 60646 752-757 1.000000 78.1 pafII-cemA_p4 pafII-cemA 4 TTTCTTGCGCGTACCAATTG GAAATCCACCAGGGCAGAAA 20 20 45.0 50.0 57.7 58.1 8.4 0.0 0.400584 60018 60646 726-731 1.000000 77.3 pafII-cemA_p5 pafII-cemA 5 TGCGCGTACCAATTGAAGTA TCCACCAGGGCAGAAATACT 20 20 45.0 50.0 57.9 58.3 8.4 0.0 0.412899 60018 60646 717-722 1.000000 77.3 petA-psbJ_p1 petA-psbJ 1 GAGAAGGTTCAATTGGCCGA TCCGGATTAGGTTCATCCCT 20 20 50.0 50.0 58.2 57.5 5.4 0.0 0.668311 62513 63508 1053-1053 1.000000 74.9 petA-psbJ_p2 petA-psbJ 2 TCGAGAAGGTTCAATTGGCC TCCGGATTAGGTTCATCCCT 20 20 50.0 50.0 58.2 57.5 5.4 0.0 0.668311 62513 63508 1055-1055 1.000000 74.9 petA-psbJ_p3 petA-psbJ 3 GAGAAGGTTCAATTGGCCGA CCGGATTAGGTTCATCCCTG 20 20 50.0 55.0 58.2 57.4 5.4 0.0 0.729614 62513 63508 1052-1052 1.000000 74.4 petA-psbJ_p4 petA-psbJ 4 TCGAGAAGGTTCAATTGGCC CCGGATTAGGTTCATCCCTG 20 20 50.0 55.0 58.2 57.4 5.4 0.0 0.729614 62513 63508 1054-1054 1.000000 74.4 petA-psbJ_p5 petA-psbJ 5 AGAAGGTTCAATTGGCCGAA TCCGGATTAGGTTCATCCCT 20 20 45.0 50.0 57.7 57.5 5.4 0.0 0.775892 62513 63508 1052-1052 1.000000 74.0 rpl20-rps12_p1 rpl20-rps12 1 TCCGAGCTATATATCCGCGT ACAGCCCATTCGAAATGTCA 20 20 50.0 45.0 58.0 57.8 4.9 0.0 0.232931 68149 68956 921-922 1.000000 78.3 rpl20-rps12_p2 rpl20-rps12 2 TCCGAGCTATATATCCGCGT ACAAGACAGCCCATTCGAAA 20 20 50.0 45.0 58.0 57.7 4.9 0.0 0.304456 68149 68956 926-927 1.000000 77.7 rpl20-rps12_p3 rpl20-rps12 3 ACCCTCGAAAACTTGATGCA ACAGCCCATTCGAAATGTCA 20 20 45.0 45.0 57.7 57.8 0.0 0.0 0.469179 68149 68956 966-967 1.000000 76.4 rpl20-rps12_p4 rpl20-rps12 4 TCCGAGCTATATATCCGCGT AGACAGCCCATTCGAAATGT 20 20 50.0 45.0 58.0 57.5 4.9 0.0 0.531003 68149 68956 923-924 1.000000 75.9 rpl20-rps12_p5 rpl20-rps12 5 ACCCTCGAAAACTTGATGCA ACAAGACAGCCCATTCGAAA 20 20 45.0 45.0 57.7 57.7 0.0 0.0 0.540704 68149 68956 971-972 1.000000 75.8 clpP1_p1 clpP1 1 TGGGCTGGTTTAGATTGATCC ACGTTTCCACATCAAAGTGA 21 20 47.6 40.0 57.7 55.5 0.0 0.0 3.778547 69195 71097 2062-2072 1.000000 49.9 clpP1_p2 clpP1 2 TGGGCTGGTTTAGATTGATCC ACGTTTCCACATCAAAGTGAA 21 21 47.6 38.1 57.7 56.3 0.0 0.0 3.989701 69195 71097 2062-2072 1.000000 48.2 clpP1_p3 clpP1 3 GGGCTGGTTTAGATTGATCCT ACGTTTCCACATCAAAGTGA 21 20 47.6 40.0 57.4 55.5 0.0 0.0 4.066145 69195 71097 2061-2071 1.000000 47.6 clpP1_p4 clpP1 4 TGGGCTGGTTTAGATTGATCC ACGTTTCCACATCAAAGTGAAA 21 22 47.6 36.4 57.7 57.0 0.0 0.0 4.271502 69195 71097 2062-2072 1.000000 46.0 clpP1_p5 clpP1 5 GGGCTGGTTTAGATTGATCCT ACGTTTCCACATCAAAGTGAA 21 21 47.6 38.1 57.4 56.3 0.0 0.0 4.277299 69195 71097 2061-2071 1.000000 45.9 rpoA_p1 rpoA 1 TGAATTGTGCTACAGATTCA AATGGCTGTAGACCTCCCAA 20 20 35.0 50.0 52.5 58.3 14.7 0.0 5.823240 76928 77935 1179-1179 1.000000 40.1 rpoA_p2 rpoA 2 TGAATTGTGCTACAGATTCA ATGGCTGTAGACCTCCCAAA 20 20 35.0 50.0 52.5 58.3 14.7 0.0 5.823240 76928 77935 1178-1178 1.000000 40.1 rpoA_p3 rpoA 3 TGAATTGTGCTACAGATTCAA AATGGCTGTAGACCTCCCAA 21 20 33.3 50.0 53.4 58.3 15.5 0.0 5.884990 76928 77935 1179-1179 1.000000 40.1 rpoA_p4 rpoA 4 TGAATTGTGCTACAGATTCAA ATGGCTGTAGACCTCCCAAA 21 20 33.3 50.0 53.4 58.3 15.5 0.0 5.884990 76928 77935 1178-1178 1.000000 40.1 rpoA_p5 rpoA 5 TGAATTGTGCTACAGATTCAAATCT ATGGCTGTAGACCTCCCAAA 25 20 32.0 50.0 57.3 58.3 15.5 0.0 6.023634 76928 77935 1178-1178 1.000000 40.1 rpl16-rps3_p1 rpl16-rps3 1 GTTCAAGTGCCTGAAGAGCA ATCTATGGGGTCTTGGGCAT 20 20 50.0 50.0 58.4 58.2 0.0 0.0 0.563647 80582 81595 1189-1190 1.000000 75.7 rpl16-rps3_p2 rpl16-rps3 2 GGGTTCAAGTGCCTGAAGAG ATCTATGGGGTCTTGGGCAT 20 20 55.0 50.0 58.5 58.2 0.0 0.0 0.633260 80582 81595 1191-1192 1.000000 75.1 rpl16-rps3_p3 rpl16-rps3 3 TTCAAGTGCCTGAAGAGCAT ATCTATGGGGTCTTGGGCAT 20 20 45.0 50.0 57.4 58.2 0.0 0.0 0.735395 80582 81595 1188-1189 1.000000 74.3 rpl16-rps3_p4 rpl16-rps3 4 GTTCAAGTGCCTGAAGAGCA CCCTACAAACCATTCGAGCT 20 20 50.0 50.0 58.4 57.6 0.0 0.0 0.805510 80582 81595 1242-1243 1.000000 73.7 rpl16-rps3_p5 rpl16-rps3 5 GTTCAAGTGCCTGAAGAGCA GGGGTCTTGGGCATCAAAAT 20 20 50.0 50.0 58.4 58.4 0.0 0.0 0.830303 80582 81595 1183-1184 1.000000 73.6 trnA-UGC_p1 trnA-UGC 1 TGATTTACTTCACGGGCGAG GGTGCTGCTAAATGGATGGA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.061720 101860 102737 1113-1113 1.000000 79.6 trnA-UGC_p2 trnA-UGC 2 TGATTTACTTCACGGGCGAG AGGTGCTGCTAAATGGATGG 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.067553 101860 102737 1114-1114 1.000000 79.5 trnA-UGC_p3 trnA-UGC 3 TGATTTACTTCACGGGCGAG AATCATAGATCGAACCGCCG 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.070575 101860 102737 1069-1069 1.000000 79.5 trnA-UGC_p4 trnA-UGC 4 TGATTTACTTCACGGGCGAG CATAGATCGAACCGCCGAAT 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.070575 101860 102737 1066-1066 1.000000 79.5 trnA-UGC_p5 trnA-UGC 5 GCGCCAGGGAAAAGAATAGA GGTGCTGCTAAATGGATGGA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.095524 101860 102737 1062-1062 1.000000 79.3 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 AAGGAAAGGTTATTGGGCGG GATGATATGCCATGCCGCTA 20 20 50.0 50.0 58.2 58.0 0.0 0.0 0.181092 111422 112143 917-923 1.000000 79.2 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 AAGGAAAGGTTATTGGGCGG TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 58.2 57.9 0.0 0.0 0.276949 111422 112143 864-870 1.000000 78.4 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 AAGGAAAGGTTATTGGGCGG AGCAGCGTGTCTACCAATTT 20 20 50.0 45.0 58.2 57.8 0.0 0.0 0.337676 111422 112143 857-863 1.000000 77.9 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 AAGGAAAGGTTATTGGGCGG CCTAAGAGCAGCGTGTCTAC 20 20 50.0 55.0 58.2 57.8 0.0 0.0 0.348967 111422 112143 863-869 1.000000 77.9 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 AAGGAAAGGTTATTGGGCGG CTAAGAGCAGCGTGTCTACC 20 20 50.0 55.0 58.2 57.8 0.0 0.0 0.348967 111422 112143 862-868 1.000000 77.9 trnL-UAG-ccsA_p1 trnL-UAG-ccsA 1 TAGACACGCTGCTCTTAGGA AGAATTGAAACAGTCGAAAAAGA 20 23 50.0 30.4 57.9 55.0 0.0 0.0 6.080626 112224 112325 225-225 1.000000 40.7 trnL-UAG-ccsA_p2 trnL-UAG-ccsA 2 AAATTGGTAGACACGCTGCT AGAATTGAAACAGTCGAAAAAGA 20 23 45.0 30.4 57.8 55.0 0.0 0.0 6.141353 112224 112325 232-232 1.000000 40.7 trnL-UAG-ccsA_p3 trnL-UAG-ccsA 3 GGTAGACACGCTGCTCTTAG AGAATTGAAACAGTCGAAAAAGA 20 23 55.0 30.4 57.8 55.0 0.0 0.0 6.152644 112224 112325 227-227 1.000000 40.7 trnL-UAG-ccsA_p4 trnL-UAG-ccsA 4 GTAGACACGCTGCTCTTAGG AGAATTGAAACAGTCGAAAAAGA 20 23 55.0 30.4 57.8 55.0 0.0 0.0 6.152644 112224 112325 226-226 1.000000 40.7 trnL-UAG-ccsA_p5 trnL-UAG-ccsA 5 ACAAGCCGCTATGGTGAAAT AGAATTGAAACAGTCGAAAAAGA 20 23 45.0 30.4 57.9 55.0 0.0 0.0 6.085119 112224 112325 248-248 1.000000 40.6 ccsA_p1 ccsA 1 TGAATTTCATTTCCGATTTCGA TCCTATTGGTAAGAATCCCCC 22 21 31.8 47.6 54.7 56.2 0.7 0.0 8.078850 112326 113303 1061-1064 1.000000 40.1 ccsA_p2 ccsA 2 TGAATTTCATTTCCGATTTCGA TTCCTATTGGTAAGAATCCCCC 22 22 31.8 45.5 54.7 56.9 0.7 0.0 8.330390 112326 113303 1062-1065 1.000000 40.1 ccsA_p3 ccsA 3 ATGAATTTCATTTCCGATTTCGA TCCTATTGGTAAGAATCCCCC 23 21 30.4 47.6 55.3 56.2 6.1 0.0 8.529401 112326 113303 1062-1065 1.000000 40.1 ccsA_p4 ccsA 4 TGAATTTCATTTCCGATTTCGAT TCCTATTGGTAAGAATCCCCC 23 21 30.4 47.6 55.3 56.2 0.7 0.0 8.529401 112326 113303 1061-1064 1.000000 40.1 ccsA_p5 ccsA 5 TGAATTTCATTTCCGATTTCG TCCTATTGGTAAGAATCCCCC 21 21 33.3 47.6 53.2 56.2 0.0 0.0 8.622571 112326 113303 1061-1064 1.000000 40.1 ndhD_p1 ndhD 1 TTGTGTGAACTGGTGAGAGC TTTTTCTGGCCCAAGCGTAT 20 20 50.0 45.0 58.0 58.1 0.0 0.0 0.128569 113553 114941 1711-1711 1.000000 79.2 ndhD_p2 ndhD 2 TTGTGTGAACTGGTGAGAGC ATGTACCCAATGTGTCCGTG 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.154391 113553 114941 2009-2010 1.000000 79.0 ndhD_p3 ndhD 3 TTGGAGTTGGGACCCAAAAG TTTTTCTGGCCCAAGCGTAT 20 20 50.0 45.0 57.9 58.1 27.9 0.0 0.162782 113553 114941 1998-2001 1.000000 78.9 ndhD_p4 ndhD 4 TTGTGTGAACTGGTGAGAGC ACTGCGTTGGTTGTAAGAGG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.167488 113553 114941 1908-1909 1.000000 78.9 ndhD_p5 ndhD 5 TTGTGTGAACTGGTGAGAGC CTGCGTTGGTTGTAAGAGGT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.167488 113553 114941 1907-1908 1.000000 78.9 ndhA_p1 ndhA 1 AGGGAACATGTCGGAATATCT CCGCCGGGATTTATCAACTT 21 20 42.9 50.0 56.2 58.3 0.0 2.2 3.112269 117676 119767 2293-2294 1.000000 55.3 ndhA_p2 ndhA 2 AGGGAACATGTCGGAATATCT GCCGGGATTTATCAACTTGC 21 20 42.9 50.0 56.2 57.5 0.0 2.2 3.279841 117676 119767 2291-2292 1.000000 54.0 ndhA_p3 ndhA 3 AGGGAACATGTCGGAATATCT ACTTGCAAATTCTTCCGCAG 21 20 42.9 45.0 56.2 57.3 0.0 0.0 3.499878 117676 119767 2277-2278 1.000000 52.2 ndhA_p4 ndhA 4 AGGGAACATGTCGGAATATCT CTTGCAAATTCTTCCGCAGT 21 20 42.9 45.0 56.2 57.3 0.0 0.0 3.499878 117676 119767 2276-2277 1.000000 52.2 ndhA_p5 ndhA 5 AGGGAACATGTCGGAATATCT CGCCGGGATTTATCAACTTG 21 20 42.9 50.0 56.2 57.2 0.0 2.2 3.543658 117676 119767 2292-2293 1.000000 51.9 ycf1_p1 ycf1 1 GGAAGAAGTATACCATGAATCCGA TGAACTTTTCAATCCTTGGGT 24 21 41.7 38.1 57.9 55.6 0.0 0.0 7.515894 125767 125886 306-306 1.000000 40.5 ycf1_p2 ycf1 2 TGGAAGAAGTATACCATGAATCCG TGAACTTTTCAATCCTTGGGT 24 21 41.7 38.1 58.1 55.6 0.0 0.0 7.564043 125767 125886 307-307 1.000000 40.5 ycf1_p3 ycf1 3 TCTTGATAATTGGCATCTGGA TGAACTTTTCAATCCTTGGGT 21 21 38.1 38.1 54.7 55.6 0.0 0.0 7.745027 125767 125886 324-324 1.000000 40.5 ycf1_p4 ycf1 4 GGAAGAAGTATACCATGAATCCGA TGAACTTTTCAATCCTTGGGTT 24 22 41.7 36.4 57.9 56.4 0.0 0.0 7.747609 125767 125886 306-306 1.000000 40.5 ycf1_p5 ycf1 5 TCTTGATAATTGGCATCTGGAAG TGAACTTTTCAATCCTTGGGT 23 21 39.1 38.1 56.6 55.6 0.0 0.0 7.774541 125767 125886 324-324 1.000000 40.5