primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 GTCTTTCAAGTCGCACGTTG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.081289 5752 7270 1593-1630 1.000000 82.7 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 ATGTCTTTCAAGTCGCACGT GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 0.0 16.9 0.210236 5752 7270 1595-1632 1.000000 81.7 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 5752 7270 1586-1623 1.000000 81.7 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 GTCGAGTCAAGAGCACCTTT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.8 58.1 0.0 16.9 0.232444 5752 7270 1657-1694 1.000000 81.4 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 CATGTCTTTCAAGTCGCACG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.8 58.1 0.0 16.9 0.293454 5752 7270 1596-1633 1.000000 81.0 trnS-CGA-trnR-UCU_p1 trnS-CGA-trnR-UCU 1 AGCCTTCCAAGCTAACGATG TGGGAATACATTGCGTCCAA 20 20 50.0 45.0 58.0 57.5 0.0 4.0 0.528482 9826 10084 385-400 1.000000 81.5 trnS-CGA-trnR-UCU_p2 trnS-CGA-trnR-UCU 2 CCTAGCCTTCCAAGCTAACG TGGGAATACATTGCGTCCAA 20 20 55.0 45.0 58.1 57.5 0.0 4.0 0.557319 9826 10084 388-403 1.000000 81.2 trnS-CGA-trnR-UCU_p3 trnS-CGA-trnR-UCU 3 AGCCTTCCAAGCTAACGATG ATGGGAATACATTGCGTCCA 20 20 50.0 45.0 58.0 57.3 0.0 4.0 0.756962 9826 10084 386-401 1.000000 79.6 trnS-CGA-trnR-UCU_p4 trnS-CGA-trnR-UCU 4 CCTAGCCTTCCAAGCTAACG ATGGGAATACATTGCGTCCA 20 20 55.0 45.0 58.1 57.3 0.0 4.0 0.785798 9826 10084 389-404 1.000000 79.4 trnS-CGA-trnR-UCU_p5 trnS-CGA-trnR-UCU 5 CCCTAGCCTTCCAAGCTAAC TGGGAATACATTGCGTCCAA 20 20 55.0 45.0 57.7 57.5 0.0 4.0 0.832333 9826 10084 389-404 1.000000 79.0 atpA-atpF_p1 atpA-atpF 1 TTCGTCGGCTCGAATAGTTG TTACGTACCATCAGTGCCAA 20 20 50.0 45.0 58.1 56.9 9.6 0.0 1.228538 11798 11857 140-147 1.000000 74.6 atpA-atpF_p2 atpA-atpF 2 TTCGTCGGCTCGAATAGTTG TTTACGTACCATCAGTGCCA 20 20 50.0 45.0 58.1 56.9 9.6 0.0 1.228538 11798 11857 141-148 1.000000 74.6 atpA-atpF_p3 atpA-atpF 3 TTCGTCGGCTCGAATAGTTG ACGTACCATCAGTGCCAATA 20 20 50.0 45.0 58.1 56.6 9.6 0.0 1.458303 11798 11857 138-145 1.000000 72.8 atpA-atpF_p4 atpA-atpF 4 TGCTCAATGCGTTCACGTAT TTACGTACCATCAGTGCCAA 20 20 45.0 45.0 58.3 56.9 0.6 0.0 1.411877 11798 11857 172-179 1.000000 72.3 atpA-atpF_p5 atpA-atpF 5 TGCTCAATGCGTTCACGTAT TTTACGTACCATCAGTGCCA 20 20 45.0 45.0 58.3 56.9 0.6 0.0 1.411877 11798 11857 173-180 1.000000 72.3 atpF-atpH_p1 atpF-atpH 1 ATTAAACCCGAAACTCCCGG TGAGGCAGAGGGAAAAATCC 20 20 50.0 50.0 57.9 57.5 0.0 0.0 0.632771 13121 13501 568-571 1.000000 78.7 atpF-atpH_p2 atpF-atpH 2 ATTAAACCCGAAACTCCCGG CCTGAGGCAGAGGGAAAAAT 20 20 50.0 50.0 57.9 57.5 0.0 0.0 0.639860 13121 13501 570-573 1.000000 78.7 atpF-atpH_p3 atpF-atpH 3 CCAGTAGCCCAAAGAAACGA TGAGGCAGAGGGAAAAATCC 20 20 50.0 50.0 57.8 57.5 0.0 0.0 0.693370 13121 13501 541-544 1.000000 78.4 atpF-atpH_p4 atpF-atpH 4 CCAGTAGCCCAAAGAAACGA CCTGAGGCAGAGGGAAAAAT 20 20 50.0 50.0 57.8 57.5 0.0 0.0 0.700459 13121 13501 543-546 1.000000 78.4 atpF-atpH_p5 atpF-atpH 5 ATTAAACCCGAAACTCCCGG GCAGAGGGAAAAATCCGAGG 20 20 50.0 55.0 57.9 58.6 0.0 0.0 0.734790 13121 13501 564-567 1.000000 77.9 trnC-GCA-petN_p1 trnC-GCA-petN 1 AGTTCAAATCTGGGTGTCGC AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.5 58.2 0.0 0.0 0.627590 28025 28486 504-513 1.000000 79.0 trnC-GCA-petN_p2 trnC-GCA-petN 2 AGTTCAAATCTGGGTGTCGC AGAGTCCACTTCTTCCCCAT 20 20 50.0 50.0 58.5 57.6 0.0 0.0 0.827105 28025 28486 565-574 1.000000 77.0 trnC-GCA-petN_p3 trnC-GCA-petN 3 CGGGGGACTGCAAATCTTTT AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.7 58.2 0.0 0.0 0.894536 28025 28486 530-539 1.000000 76.7 trnC-GCA-petN_p4 trnC-GCA-petN 4 CGGGGGACTGCAAATCTTTT AGAGTCCACTTCTTCCCCAT 20 20 50.0 50.0 58.7 57.6 0.0 0.0 1.094050 28025 28486 591-600 1.000000 74.7 trnC-GCA-petN_p5 trnC-GCA-petN 5 CGGGGGACTGCAAATCTTT AGCCCAAGCGAGACTTACTA 19 20 52.6 50.0 58.0 58.2 0.0 0.0 1.189924 28025 28486 530-539 1.000000 74.4 petN-psbM_p1 petN-psbM 1 GGCTCAATTATTCCCCAGCA TTTTCGTTTGATTCGGCGTG 20 20 50.0 45.0 57.9 58.0 0.0 6.8 0.097322 28577 29584 1804-1844 1.000000 84.7 petN-psbM_p2 petN-psbM 2 TGGCTCAATTATTCCCCAGC TTTTCGTTTGATTCGGCGTG 20 20 50.0 45.0 57.9 58.0 0.0 6.8 0.097322 28577 29584 1805-1845 1.000000 84.7 petN-psbM_p3 petN-psbM 3 GGCTCAATTATTCCCCAGCA ATCGGGAATCCCACTTTTCG 20 20 50.0 50.0 57.9 58.0 0.0 19.8 0.110164 28577 29584 1818-1858 1.000000 84.5 petN-psbM_p4 petN-psbM 4 AAGGGGCGGAATTTCGATAC TTTTCGTTTGATTCGGCGTG 20 20 50.0 45.0 58.0 58.0 11.2 6.8 0.062372 28577 29584 1653-1684 0.833333 75.9 petN-psbM_p5 petN-psbM 5 AAGGGGCGGAATTTCGATAC ATCGGGAATCCCACTTTTCG 20 20 50.0 50.0 58.0 58.0 11.2 19.8 0.075215 28577 29584 1667-1698 0.833333 75.7 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GGCGTAAGTCATCGGTTCAA AGCAATAAACCAGACCAGCC 20 20 50.0 50.0 58.3 58.2 0.0 0.0 0.443383 31790 32975 1335-1356 1.000000 80.0 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 GGCGTAAGTCATCGGTTCAA GCAATAAACCAGACCAGCCT 20 20 50.0 50.0 58.3 58.2 0.0 0.0 0.443383 31790 32975 1334-1355 1.000000 80.0 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 CCCCTTTAACTCAGCGGTAG AGCAATAAACCAGACCAGCC 20 20 55.0 50.0 57.7 58.2 0.0 0.0 0.471700 31790 32975 1371-1392 1.000000 79.7 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 CCCCTTTAACTCAGCGGTAG GCAATAAACCAGACCAGCCT 20 20 55.0 50.0 57.7 58.2 0.0 0.0 0.471700 31790 32975 1370-1391 1.000000 79.7 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 GGCGTAAGTCATCGGTTCAA ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 58.3 58.2 0.0 0.0 0.528876 31790 32975 1314-1335 1.000000 79.4 trnS-UGA-psbZ_p1 trnS-UGA-psbZ 1 CAACCACTCAGCCATCTCTC ATACAACGGGTACGCCAATC 20 20 55.0 50.0 58.0 58.1 0.0 4.1 0.077324 35728 36076 442-449 1.000000 84.2 trnS-UGA-psbZ_p2 trnS-UGA-psbZ 2 GTTTTCAAGACCGGGGCTAT ATACAACGGGTACGCCAATC 20 20 50.0 50.0 57.9 58.1 0.8 4.1 0.180246 35728 36076 462-469 1.000000 83.2 trnS-UGA-psbZ_p3 trnS-UGA-psbZ 3 CAACCACTCAGCCATCTCTC AAATACAACGGGTACGCCAA 20 20 55.0 45.0 58.0 57.8 0.0 4.1 0.203309 35728 36076 444-451 1.000000 83.2 trnS-UGA-psbZ_p4 trnS-UGA-psbZ 4 CAACCACTCAGCCATCTCTC CAACCCTCAGGAGAAGCAAA 20 20 55.0 50.0 58.0 57.7 0.0 0.0 0.298087 35728 36076 461-468 1.000000 82.3 trnS-UGA-psbZ_p5 trnS-UGA-psbZ 5 GTTTTCAAGACCGGGGCTAT AAATACAACGGGTACGCCAA 20 20 50.0 45.0 57.9 57.8 0.8 4.1 0.306231 35728 36076 464-471 1.000000 82.2 rps4-trnT-UGU_p1 rps4-trnT-UGU 1 CTCCCAGGCGACGTATTTTT CTCAGAGGTTAGAGCATCGC 20 20 50.0 55.0 58.3 57.9 0.0 0.0 0.398577 46105 46450 454-460 1.000000 81.5 rps4-trnT-UGU_p2 rps4-trnT-UGU 2 GTAAGTCCGGGTAAAGCTCC CTCAGAGGTTAGAGCATCGC 20 20 55.0 55.0 57.7 57.9 0.0 0.0 0.439081 46105 46450 470-476 1.000000 81.1 rps4-trnT-UGU_p3 rps4-trnT-UGU 3 CTCCCAGGCGACGTATTTTT ATTCTATGAGATGCGCCTGC 20 20 50.0 50.0 58.3 58.2 0.0 4.2 0.459968 46105 46450 478-484 1.000000 80.8 rps4-trnT-UGU_p4 rps4-trnT-UGU 4 CAGCTCGGGGCCTTTTATTA CTCAGAGGTTAGAGCATCGC 20 20 50.0 55.0 57.7 57.9 0.8 0.0 0.474586 46105 46450 490-496 1.000000 80.6 rps4-trnT-UGU_p5 rps4-trnT-UGU 5 GCTCGGGGCCTTTTATTAGT CTCAGAGGTTAGAGCATCGC 20 20 50.0 55.0 57.7 57.9 0.8 0.0 0.476224 46105 46450 488-494 1.000000 80.6 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 46524 47308 829-849 1.000000 82.1 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 46524 47308 837-857 1.000000 81.5 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 46524 47308 861-881 1.000000 81.1 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 46524 47308 869-889 1.000000 80.5 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG AGTCCGTAGCGTCTACCAAT 20 20 55.0 50.0 57.9 58.2 0.0 10.2 0.372548 46524 47308 843-863 1.000000 80.1 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 GGGATAGCTCAGCTGGTAGA AGTTGGATAGGATGGCCCTT 20 20 55.0 50.0 58.0 58.1 10.3 0.0 0.089643 48381 49054 782-830 1.000000 85.4 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 CCTCGTGTCACCAGTTCAAA AGTTGGATAGGATGGCCCTT 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.139034 48381 49054 746-794 1.000000 85.1 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 TCAAATCTGGTTCCTGGCAC AGTTGGATAGGATGGCCCTT 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.177438 48381 49054 731-779 1.000000 84.9 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 CTGGTAGAGCAGAGGACTGA AGTTGGATAGGATGGCCCTT 20 20 55.0 50.0 57.9 58.1 2.5 0.0 0.223436 48381 49054 770-818 1.000000 84.4 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 GGGATAGCTCAGCTGGTAGA TGATAATCATCCGCGCTTGA 20 20 55.0 45.0 58.0 57.5 10.3 5.6 0.527074 48381 49054 822-870 1.000000 81.8 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 ATCATATTCATAAAGCAGAAACA AGAAGGTCTACGGTTCGAGT 23 20 26.1 50.0 52.2 57.8 0.0 0.0 8.967453 50741 51861 990-1192 1.000000 47.1 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TCATATTCATAAAGCAGAAACAT AGAAGGTCTACGGTTCGAGT 23 20 26.1 50.0 52.2 57.8 0.0 0.0 8.967453 50741 51861 989-1191 1.000000 47.1 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 ATCATATTCATAAAGCAGAAACA GAAGGTCTACGGTTCGAGTC 23 20 26.1 55.0 52.2 57.5 0.0 0.0 9.311225 50741 51861 989-1191 1.000000 47.1 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 TCATATTCATAAAGCAGAAACAT GAAGGTCTACGGTTCGAGTC 23 20 26.1 55.0 52.2 57.5 0.0 0.0 9.311225 50741 51861 988-1190 1.000000 47.1 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 ATCATATTCATAAAGCAGAAACAT AGAAGGTCTACGGTTCGAGT 24 20 25.0 50.0 52.9 57.8 0.0 0.0 9.333295 50741 51861 990-1192 1.000000 47.1 psbE-petL_p1 psbE-petL 1 AGAACGTTCTCCTGTGCTTC CCGAAATAACTAGTTATCGTAGGC 20 24 50.0 41.7 57.8 57.1 24.9 24.8 5.080972 65094 66317 1271-1299 1.000000 45.9 psbE-petL_p2 psbE-petL 2 CAACCCGCAATGAATAGGGA CCGAAATAACTAGTTATCGTAGGC 20 24 50.0 41.7 57.9 57.1 6.4 24.8 4.975963 65094 66317 1348-1376 1.000000 45.7 psbE-petL_p3 psbE-petL 3 ACGAATAACCAACCCGCAAT CCGAAATAACTAGTTATCGTAGGC 20 24 45.0 41.7 58.2 57.1 0.0 24.8 5.095650 65094 66317 1357-1385 1.000000 45.5 psbE-petL_p4 psbE-petL 4 TGCTGACGAATAACCAACCC CCGAAATAACTAGTTATCGTAGGC 20 24 50.0 41.7 58.2 57.1 0.0 24.8 5.108555 65094 66317 1362-1390 1.000000 45.5 psbE-petL_p5 psbE-petL 5 CGAATAACCAACCCGCAATG CCGAAATAACTAGTTATCGTAGGC 20 24 50.0 41.7 57.8 57.1 0.0 24.8 5.111980 65094 66317 1356-1384 1.000000 45.5 rpl36-rps8_p1 rpl36-rps8 1 ACTATAATTCGTCCCCGCCT AATTTTAGGCGGAATGGGGG 20 20 50.0 50.0 58.3 58.2 0.0 0.0 0.498474 80228 80685 642-650 1.000000 79.7 rpl36-rps8_p2 rpl36-rps8 2 ACTATAATTCGTCCCCGCCT GCGGAATGGGGGTTGTAATT 20 20 50.0 50.0 58.3 58.5 0.0 0.0 0.805913 80228 80685 634-642 1.000000 77.3 rpl36-rps8_p3 rpl36-rps8 3 ACTATAATTCGTCCCCGCCT CGGAATGGGGGTTGTAATTCT 20 21 50.0 47.6 58.3 58.0 0.0 0.0 1.299637 80228 80685 633-641 1.000000 73.4 rpl36-rps8_p4 rpl36-rps8 4 ACTATAATTCGTCCCCGCCTA AATTTTAGGCGGAATGGGGG 21 20 47.6 50.0 58.1 58.2 0.0 0.0 1.331328 80228 80685 642-650 1.000000 73.1 rpl36-rps8_p5 rpl36-rps8 5 TACTATAATTCGTCCCCGCCT AATTTTAGGCGGAATGGGGG 21 20 47.6 50.0 58.1 58.2 0.0 0.0 1.331328 80228 80685 643-651 1.000000 73.1 rps12-trnV-GAC_p1 rps12-trnV-GAC 1 TGGCAACTTTACGTAAGGCA GGATAACCAGGCTCGAACTG 20 20 45.0 55.0 57.7 58.1 16.5 9.3 0.316366 98961 100451 1594-1629 1.000000 79.0 rps12-trnV-GAC_p2 rps12-trnV-GAC 2 TGGCAACTTTACGTAAGGCA GATGACTTCCACCACGTCAA 20 20 45.0 50.0 57.7 57.8 16.5 0.0 0.421509 98961 100451 1575-1610 1.000000 78.2 rps12-trnV-GAC_p3 rps12-trnV-GAC 3 TGGCAACTTTACGTAAGGCA AACTGATGACTTCCACCACG 20 20 45.0 50.0 57.7 57.8 16.5 0.0 0.427523 98961 100451 1579-1614 1.000000 78.1 rps12-trnV-GAC_p4 rps12-trnV-GAC 4 TGGCAACTTTACGTAAGGCA ATGACTTCCACCACGTCAAG 20 20 45.0 50.0 57.7 57.8 16.5 0.0 0.427523 98961 100451 1574-1609 1.000000 78.1 rps12-trnV-GAC_p5 rps12-trnV-GAC 5 TGGCAACTTTACGTAAGGCA CTGATGACTTCCACCACGTC 20 20 45.0 55.0 57.7 58.3 16.5 0.0 0.542896 98961 100451 1577-1612 1.000000 77.2 ndhF-rpl32_p1 ndhF-rpl32 1 AAGAAGAAGTCCCACTCCGA AAAGCCGCCCAATATCCTTT 20 20 50.0 45.0 58.0 57.8 0.0 0.0 0.170302 112513 113384 1036-1045 1.000000 84.3 ndhF-rpl32_p2 ndhF-rpl32 2 AAGAAGAAGTCCCACTCCGA AAGCCGCCCAATATCCTTTC 20 20 50.0 50.0 58.0 58.3 0.0 0.0 0.318712 112513 113384 1035-1044 1.000000 83.1 ndhF-rpl32_p3 ndhF-rpl32 3 AAGAAGAAGTCCCACTCCGA GCCGCCCAATATCCTTTCTT 20 20 50.0 50.0 58.0 58.3 0.0 0.0 0.318712 112513 113384 1033-1042 1.000000 83.1 ndhF-rpl32_p4 ndhF-rpl32 4 AGAAGAAGTCCCACTCCGAT AAAGCCGCCCAATATCCTTT 20 20 50.0 45.0 57.8 57.8 0.0 0.0 0.398861 112513 113384 1035-1044 1.000000 82.5 ndhF-rpl32_p5 ndhF-rpl32 5 AGAAGAAGTCCCACTCCGAT GCCGCCCAATATCCTTTCTT 20 20 50.0 50.0 57.8 58.3 0.0 0.0 0.547271 112513 113384 1032-1041 1.000000 81.3 trnL-UAG-ccsA_p1 trnL-UAG-ccsA 1 TAGACACGCTGCTCTTAGGA AGGAAATATGAGTTAATATATGCTCT 20 26 50.0 26.9 57.9 54.0 0.0 11.2 10.169844 114056 114161 209-211 1.000000 43.4 trnL-UAG-ccsA_p2 trnL-UAG-ccsA 2 AAATTGGTAGACACGCTGCT AGGAAATATGAGTTAATATATGCTCT 20 26 45.0 26.9 57.8 54.0 0.0 11.2 10.230571 114056 114161 216-218 1.000000 43.3 trnL-UAG-ccsA_p3 trnL-UAG-ccsA 3 AACAAGCCGCTATGGTGAAA AGGAAATATGAGTTAATATATGCTCT 20 26 45.0 26.9 58.1 54.0 0.0 11.2 10.141280 114056 114161 233-235 1.000000 43.1 trnL-UAG-ccsA_p4 trnL-UAG-ccsA 4 ACAAGCCGCTATGGTGAAAT AGGAAATATGAGTTAATATATGCTCT 20 26 45.0 26.9 57.9 54.0 0.0 11.2 10.174338 114056 114161 232-234 1.000000 43.1 trnL-UAG-ccsA_p5 trnL-UAG-ccsA 5 TTTGAACAAGCCGCTATGGT AGGAAATATGAGTTAATATATGCTCT 20 26 45.0 26.9 58.1 54.0 0.0 11.2 10.141280 114056 114161 237-239 1.000000 43.0 ccsA-ndhD_p1 ccsA-ndhD 1 GCCAATTCTTCGATTGTGGC TATCTTGACGAAATGGGCGG 20 20 50.0 50.0 58.1 58.1 9.5 0.0 0.138579 115143 115392 798-806 1.000000 83.3 ccsA-ndhD_p2 ccsA-ndhD 2 ACCTGCTCTCCAATCTGAGT TATCTTGACGAAATGGGCGG 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.102097 115143 115392 1267-1275 1.000000 83.1 ccsA-ndhD_p3 ccsA-ndhD 3 TGGTATTGGGTTATGCAGCC TATCTTGACGAAATGGGCGG 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.117794 115143 115392 1223-1231 1.000000 83.1 ccsA-ndhD_p4 ccsA-ndhD 4 ACCTGCTCTCCAATCTGAGT TGGTGCTGCACTCTTTTTCT 20 20 50.0 45.0 58.1 57.9 0.0 29.5 0.107338 115143 115392 1322-1330 1.000000 82.9 ccsA-ndhD_p5 ccsA-ndhD 5 TGGTATTGGGTTATGCAGCC TGGTGCTGCACTCTTTTTCT 20 20 50.0 45.0 57.9 57.9 0.0 29.5 0.123036 115143 115392 1278-1286 1.000000 82.9 ndhD_p1 ndhD 1 GCCAATTCTTCGATTGTGGC AAATTGCTTCTGCCCCAAGA 20 20 50.0 45.0 58.1 58.0 9.5 0.0 0.100693 115393 116913 2134-2142 1.000000 81.6 ndhD_p2 ndhD 2 GCCAATTCTTCGATTGTGGC AATTGCTTCTGCCCCAAGAA 20 20 50.0 45.0 58.1 58.0 9.5 0.0 0.100693 115393 116913 2133-2141 1.000000 81.6 ndhD_p3 ndhD 3 TGGCTTCGATTGGCTTTCTT AAATTGCTTCTGCCCCAAGA 20 20 45.0 45.0 58.1 58.0 12.3 0.0 0.104310 115393 116913 2118-2126 1.000000 81.5 ndhD_p4 ndhD 4 TGGCTTCGATTGGCTTTCTT AATTGCTTCTGCCCCAAGAA 20 20 45.0 45.0 58.1 58.0 12.3 0.0 0.104310 115393 116913 2117-2125 1.000000 81.5 ndhD_p5 ndhD 5 GCCAATTCTTCGATTGTGGC AGCATGGGTCTCGCTTATTG 20 20 50.0 50.0 58.1 58.0 9.5 0.0 0.127642 115393 116913 2021-2029 1.000000 81.5 ycf1_p1 ycf1 1 ATTTGCGCATATGGGATCGT TCCTTTCTTGAATGGGCCAC 20 20 45.0 50.0 58.1 58.1 22.9 9.3 0.180425 127259 127378 906-921 0.833333 76.3 ycf1_p2 ycf1 2 TCTTCACCCTCTCCTTCCTG CACATCGCGGACAAATCCTA 20 20 55.0 50.0 58.1 58.1 0.0 6.1 0.121234 127259 127378 436-445 0.833333 75.5 ycf1_p3 ycf1 3 TCTTCACCCTCTCCTTCCTG TCCTTTCTTGAATGGGCCAC 20 20 55.0 50.0 58.1 58.1 0.0 9.3 0.132467 127259 127378 453-462 0.833333 75.3 ycf1_p4 ycf1 4 TTCACCCTCTCCTTCCTGTT CACATCGCGGACAAATCCTA 20 20 50.0 50.0 57.9 58.1 0.0 6.1 0.183815 127259 127378 434-443 0.833333 75.0 ycf1_p5 ycf1 5 ATTTGCGCATATGGGATCGT CACATCGCGGACAAATCCTA 20 20 45.0 50.0 58.1 58.1 22.9 6.1 0.169192 127259 127378 889-904 0.666667 67.9 trnV-GAC-rps12_p1 trnV-GAC-rps12 1 GGATAACCAGGCTCGAACTG TGGCAACTTTACGTAAGGCA 20 20 55.0 45.0 58.1 57.7 9.3 16.5 0.316366 137853 139343 1594-1629 1.000000 79.0 trnV-GAC-rps12_p2 trnV-GAC-rps12 2 GATGACTTCCACCACGTCAA TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.8 57.7 0.0 16.5 0.421509 137853 139343 1575-1610 1.000000 78.2 trnV-GAC-rps12_p3 trnV-GAC-rps12 3 AACTGATGACTTCCACCACG TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.8 57.7 0.0 16.5 0.427523 137853 139343 1579-1614 1.000000 78.1 trnV-GAC-rps12_p4 trnV-GAC-rps12 4 ATGACTTCCACCACGTCAAG TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.8 57.7 0.0 16.5 0.427523 137853 139343 1574-1609 1.000000 78.1 trnV-GAC-rps12_p5 trnV-GAC-rps12 5 CTGATGACTTCCACCACGTC TGGCAACTTTACGTAAGGCA 20 20 55.0 45.0 58.3 57.7 0.0 16.5 0.542896 137853 139343 1577-1612 1.000000 77.2