primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-rps16_p1 trnK-rps16 1 CGAATTCCTCGCTTCATCCA AAAAGGGTATGTTGCTGCCA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.068268 4407 5290 1602-1713 1.000000 86.5 trnK-rps16_p2 trnK-rps16 2 CGAATTCCTCGCTTCATCCA TCTATCCCAATGAGCCGTCT 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.148130 4407 5290 1133-1229 1.000000 86.2 trnK-rps16_p3 trnK-rps16 3 CGAATTCCTCGCTTCATCCA GCCGTACGAGGAGAAAACTT 20 20 50.0 50.0 58.1 57.9 0.0 18.8 0.136005 4407 5290 1189-1285 1.000000 86.1 trnK-rps16_p4 trnK-rps16 4 TTCCGTTCCACGAATTCGAA AAAAGGGTATGTTGCTGCCA 20 20 45.0 45.0 57.8 58.0 33.1 0.0 0.160123 4407 5290 1751-1862 1.000000 85.6 trnK-rps16_p5 trnK-rps16 5 CGAATTCCTCGCTTCATCCA CCCAGAACAAGGAAAGACCC 20 20 50.0 55.0 58.1 58.1 0.0 0.0 0.148968 4407 5290 1587-1589 0.086957 42.3 rps16-trnQ(UUG)_p1 rps16-trnQ(UUG) 1 CGGATCTGTCCTTCAAGTCG GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.1 58.1 0.0 16.9 0.161467 6435 7691 1336-1759 1.000000 82.1 rps16-trnQ(UUG)_p2 rps16-trnQ(UUG) 2 ATCTGTCCTTCAAGTCGCAC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.9 58.1 0.0 16.9 0.162155 6435 7691 1333-1756 1.000000 82.1 rps16-trnQ(UUG)_p3 rps16-trnQ(UUG) 3 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6435 7691 1322-1745 1.000000 81.7 rps16-trnQ(UUG)_p4 rps16-trnQ(UUG) 4 CCACAACGGATCTGTCCTTC GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.3 58.1 7.9 16.9 0.349248 6435 7691 1342-1765 1.000000 80.6 rps16-trnQ(UUG)_p5 rps16-trnQ(UUG) 5 GGATCTGTCCTTCAAGTCGC GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.4 58.1 0.0 16.9 0.429912 6435 7691 1335-1758 1.000000 80.0 psbI-trnS(GCU)_p1 psbI-trnS(GCU) 1 CGTAATCCTGGACGTGAAGA TGGACTAAAGCGTCGGATTG 20 20 50.0 50.0 57.1 58.0 0.0 0.0 0.938078 8800 8925 211-223 1.000000 84.5 psbI-trnS(GCU)_p2 psbI-trnS(GCU) 2 CGTAATCCTGGACGTGAAGA GTGGACTAAAGCGTCGGATT 20 20 50.0 50.0 57.1 58.0 0.0 0.0 0.939466 8800 8925 212-224 1.000000 84.5 psbI-trnS(GCU)_p3 psbI-trnS(GCU) 3 CGTAATCCTGGACGTGAAGA ATTGGGAGAGATGGCTGAGT 20 20 50.0 50.0 57.1 58.1 0.0 0.0 1.042943 8800 8925 230-242 1.000000 83.7 psbI-trnS(GCU)_p4 psbI-trnS(GCU) 4 CGTAATCCTGGACGTGAAGAA TGGACTAAAGCGTCGGATTG 21 20 47.6 50.0 57.8 58.0 0.0 0.0 1.230929 8800 8925 211-223 1.000000 82.2 psbI-trnS(GCU)_p5 psbI-trnS(GCU) 5 CGTAATCCTGGACGTGAAGAA GTGGACTAAAGCGTCGGATT 21 20 47.6 50.0 57.8 58.0 0.0 0.0 1.232316 8800 8925 212-224 1.000000 82.1 trnS(GCU)-trnG(GCC)_p1 trnS(GCU)-trnG(GCC) 1 CAATCCGACGCTTTAGTCCA AGACCGAAAGACCCTTTAACT 20 21 50.0 42.9 58.0 56.6 0.0 0.0 2.425660 9014 9720 798-831 1.000000 68.3 trnS(GCU)-trnG(GCC)_p2 trnS(GCU)-trnG(GCC) 2 AATCCGACGCTTTAGTCCAC AGACCGAAAGACCCTTTAACT 20 21 50.0 42.9 58.0 56.6 0.0 0.0 2.427048 9014 9720 797-830 1.000000 68.3 trnS(GCU)-trnG(GCC)_p3 trnS(GCU)-trnG(GCC) 3 ATCAACGGAACCGGAAAGAG AGACCGAAAGACCCTTTAACT 20 21 50.0 42.9 57.9 56.6 9.5 0.0 2.515840 9014 9720 862-895 1.000000 67.0 trnS(GCU)-trnG(GCC)_p4 trnS(GCU)-trnG(GCC) 4 CATCAACGGAACCGGAAAGA AGACCGAAAGACCCTTTAACT 20 21 50.0 42.9 58.2 56.6 9.5 0.0 2.617743 9014 9720 863-896 1.000000 66.2 trnS(GCU)-trnG(GCC)_p5 trnS(GCU)-trnG(GCC) 5 TCATCAACGGAACCGGAAAG AGACCGAAAGACCCTTTAACT 20 21 50.0 42.9 58.2 56.6 9.5 0.0 2.617743 9014 9720 864-897 1.000000 66.2 atpA-atpF_p1 atpA-atpF 1 ATGCCATCGCCTACTTGAAG TGTTGGGAGCGATGAAAGAA 20 20 50.0 45.0 58.0 57.4 0.0 0.0 0.600656 12351 12412 210-229 1.000000 77.4 atpA-atpF_p2 atpA-atpF 2 ATGCCATCGCCTACTTGAAG ATGTTGGGAGCGATGAAAGA 20 20 50.0 45.0 58.0 57.2 0.0 0.0 0.828431 12351 12412 211-230 1.000000 75.6 atpA-atpF_p3 atpA-atpF 3 ATGCCATCGCCTACTTGAAG CATGTTGGGAGCGATGAAAG 20 20 50.0 50.0 58.0 57.2 0.0 0.0 0.879345 12351 12412 212-231 1.000000 75.2 atpA-atpF_p4 atpA-atpF 4 CAATGCCATCGCCTACTTGA TGTTGGGAGCGATGAAAGAA 20 20 50.0 45.0 58.3 57.4 0.0 0.0 0.892462 12351 12412 212-231 1.000000 75.1 atpA-atpF_p5 atpA-atpF 5 ATGCCATCGCCTACTTGAAG ATATTGGCATGTTGGGAGCG 20 20 50.0 50.0 58.0 58.7 0.0 0.0 0.719484 12351 12412 219-228 0.956522 74.0 atpH-atpI_p1 atpH-atpI 1 AACAGAAGCGGCAGAAATCA TCCCTGTCATGTTCCTTGGA 20 20 45.0 50.0 58.1 58.3 1.4 0.0 0.362752 14276 15357 1203-1216 1.000000 80.5 atpH-atpI_p2 atpH-atpI 2 TACCCTCTACAGCTTGACCC TCCCTGTCATGTTCCTTGGA 20 20 55.0 50.0 58.1 58.3 0.0 0.0 0.396990 14276 15357 1288-1301 1.000000 80.0 atpH-atpI_p3 atpH-atpI 3 GCGATACCCTCTACAGCTTG TCCCTGTCATGTTCCTTGGA 20 20 55.0 50.0 57.9 58.3 0.0 0.0 0.400507 14276 15357 1292-1305 1.000000 80.0 atpH-atpI_p4 atpH-atpI 4 CAGCAGCAATAACAGAAGCG TCCCTGTCATGTTCCTTGGA 20 20 50.0 50.0 57.8 58.3 0.0 0.0 0.428635 14276 15357 1213-1226 1.000000 79.9 atpH-atpI_p5 atpH-atpI 5 GCCAATCCAGCAGCAATAAC TCCCTGTCATGTTCCTTGGA 20 20 50.0 50.0 57.8 58.3 0.0 0.0 0.473359 14276 15357 1220-1233 1.000000 79.6 rps2-rpoC2_p1 rps2-rpoC2 1 TGCCTCCATCATCTCTTCCA TTCGAGGGGGAAATGAGAGA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.364021 17034 17241 369-381 1.000000 82.7 rps2-rpoC2_p2 rps2-rpoC2 2 AACTCCTGCCTCCATCATCT TTCGAGGGGGAAATGAGAGA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.357147 17034 17241 375-387 1.000000 82.6 rps2-rpoC2_p3 rps2-rpoC2 3 TCCTGCCTCCATCATCTCTT TTCGAGGGGGAAATGAGAGA 20 20 50.0 50.0 57.8 57.8 0.0 0.0 0.434938 17034 17241 372-384 1.000000 82.0 rps2-rpoC2_p4 rps2-rpoC2 4 GAACTCCTGCCTCCATCATC TTCGAGGGGGAAATGAGAGA 20 20 55.0 50.0 57.7 57.8 0.0 0.0 0.500676 17034 17241 376-388 1.000000 81.5 rps2-rpoC2_p5 rps2-rpoC2 5 CTCCTGCCTCCATCATCTCT TTCGAGGGGGAAATGAGAGA 20 20 55.0 50.0 58.3 57.8 0.0 0.0 0.528170 17034 17241 373-385 1.000000 81.3 psbM-trnD(GUC)_p1 psbM-trnD(GUC) 1 AGAATGAATAGTGCAGTCGC TTCAATTGGTCAGAGCACCG 20 20 45.0 50.0 55.9 58.5 0.0 5.4 2.530985 30884 31530 636-759 1.000000 67.6 psbM-trnD(GUC)_p2 psbM-trnD(GUC) 2 AGAATGAATAGTGCAGTCGC GTTCAATTGGTCAGAGCACC 20 20 45.0 50.0 55.9 57.0 0.0 5.4 3.051139 30884 31530 637-760 1.000000 63.4 psbM-trnD(GUC)_p3 psbM-trnD(GUC) 3 AGTAGAAAAGCGGTAGGAACT TTCAATTGGTCAGAGCACCG 21 20 42.9 50.0 56.4 58.5 0.0 5.4 3.088455 30884 31530 657-780 1.000000 63.1 psbM-trnD(GUC)_p4 psbM-trnD(GUC) 4 AGCGGTAGGAACTAGAATGA TTCAATTGGTCAGAGCACCG 20 20 45.0 50.0 55.4 58.5 0.0 5.4 3.107053 30884 31530 649-772 1.000000 62.9 psbM-trnD(GUC)_p5 psbM-trnD(GUC) 5 AGAATGAATAGTGCAGTCGC TCAATTGGTCAGAGCACCG 20 19 45.0 52.6 55.9 57.8 0.0 5.4 3.285388 30884 31530 635-758 1.000000 61.6 ycf3-trnS(GGA)_p1 ycf3-trnS(GGA) 1 CATTTATCCGCGATCTAGGCA CCCTCGGTAAACAAAAGCCT 21 20 47.6 50.0 58.0 58.1 8.2 0.0 1.134847 45737 46532 878-899 1.000000 75.5 ycf3-trnS(GGA)_p2 ycf3-trnS(GGA) 2 CATTTATCCGCGATCTAGGCA ACGGAAAGAGAGGGATTCGA 21 20 47.6 50.0 58.0 58.2 8.2 0.0 1.191833 45737 46532 899-920 1.000000 74.9 ycf3-trnS(GGA)_p3 ycf3-trnS(GGA) 3 CATTTATCCGCGATCTAGGCA TTCCAATGCTACGCCTTGAA 21 20 47.6 45.0 58.0 57.8 8.2 5.6 1.233148 45737 46532 849-870 1.000000 74.9 ycf3-trnS(GGA)_p4 ycf3-trnS(GGA) 4 CATTTATCCGCGATCTAGGCA ACCCTCGGTAAACAAAAGCC 21 20 47.6 50.0 58.0 58.4 8.2 0.0 1.427808 45737 46532 879-900 1.000000 73.2 ycf3-trnS(GGA)_p5 ycf3-trnS(GGA) 5 TTTATCCGCGATCTAGGCAT CCCTCGGTAAACAAAAGCCT 20 20 45.0 50.0 56.6 58.1 8.2 0.0 1.514239 45737 46532 876-897 1.000000 72.5 ndhC-trnM(CAU)_p1 ndhC-trnM(CAU) 1 GGGGCTAAAATCCCGGAAAT CCCGCCGTATGAAAGCAATA 20 20 50.0 50.0 57.9 58.4 0.7 0.0 0.493466 51942 53888 2068-2092 1.000000 80.1 ndhC-trnM(CAU)_p2 ndhC-trnM(CAU) 2 GGGGCTAAAATCCCGGAAAT AGGTACCATTGACTCCGGTA 20 20 50.0 50.0 57.9 57.5 0.7 15.9 0.619773 51942 53888 2129-2153 1.000000 79.0 ndhC-trnM(CAU)_p3 ndhC-trnM(CAU) 3 GGGGCTAAAATCCCGGAAAT TAGGTACCATTGACTCCGGT 20 20 50.0 50.0 57.9 57.5 0.7 15.9 0.619773 51942 53888 2130-2154 1.000000 79.0 ndhC-trnM(CAU)_p4 ndhC-trnM(CAU) 4 GGGGCTAAAATCCCGGAAAT CCGCCGTATGAAAGCAATAC 20 20 50.0 50.0 57.9 57.3 0.7 0.0 0.745419 51942 53888 2067-2091 1.000000 78.1 ndhC-trnM(CAU)_p5 ndhC-trnM(CAU) 5 TTCTCCGGCCCTTTCCTAAT CCCGCCGTATGAAAGCAATA 20 20 50.0 50.0 58.4 58.4 0.0 0.0 0.819557 51942 53888 2089-2113 1.000000 77.4 atpB-rbcL_p1 atpB-rbcL 1 ATACGGCCCAGGTTTTGTTT AACACCCGCTTTGAATCCAA 20 20 45.0 45.0 58.0 58.3 0.0 0.0 0.305431 56062 56846 903-911 1.000000 79.9 atpB-rbcL_p2 atpB-rbcL 2 GGAAACCCCAGAACCAGAAG AACACCCGCTTTGAATCCAA 20 20 55.0 45.0 58.1 58.3 0.0 0.0 0.390437 56062 56846 874-882 1.000000 79.3 atpB-rbcL_p3 atpB-rbcL 3 GGCGGAAAGGCTACATCTAG AACACCCGCTTTGAATCCAA 20 20 55.0 45.0 57.8 58.3 0.0 0.0 0.457837 56062 56846 945-953 1.000000 78.7 atpB-rbcL_p4 atpB-rbcL 4 TACGGCCCAGGTTTTGTTTT AACACCCGCTTTGAATCCAA 20 20 45.0 45.0 58.2 58.3 0.0 0.0 0.523554 56062 56846 902-910 1.000000 78.2 atpB-rbcL_p5 atpB-rbcL 5 GGACCGATGATTTGGACGAT AACACCCGCTTTGAATCCAA 20 20 50.0 45.0 57.8 58.3 0.0 0.0 0.541987 56062 56846 921-929 1.000000 78.1 ycf4-cemA_p1 ycf4-cemA 1 CATTCCCTTGACCCGTACTG GAGAAATCCACCAGGGCAAA 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.100820 62231 63103 711-1071 1.000000 85.8 ycf4-cemA_p2 ycf4-cemA 2 ATTCCCTTGACCCGTACTGA GAGAAATCCACCAGGGCAAA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.129660 62231 63103 710-1070 1.000000 85.6 ycf4-cemA_p3 ycf4-cemA 3 TTCCCTTGACCCGTACTGAT GAGAAATCCACCAGGGCAAA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.129660 62231 63103 709-1069 1.000000 85.6 ycf4-cemA_p4 ycf4-cemA 4 CTTGCGCGTACCAATTGAAG GAGAAATCCACCAGGGCAAA 20 20 50.0 50.0 58.1 58.1 8.4 0.0 0.194446 62231 63103 636-996 1.000000 85.2 ycf4-cemA_p5 ycf4-cemA 5 GAACAAAAAGCCGCCGAATT GAGAAATCCACCAGGGCAAA 20 20 45.0 50.0 58.2 58.1 0.0 0.0 0.298310 62231 63103 665-1025 1.000000 84.4 psbE-petL_p1 psbE-petL 1 CAACCCGCAATGAATAGGGA GTCGTATCTTGCTCAGACCA 20 20 50.0 50.0 57.9 57.1 6.4 0.0 0.992787 66708 67873 1352-1375 1.000000 76.5 psbE-petL_p2 psbE-petL 2 ACTGACGAATAACCAACCCG GTCGTATCTTGCTCAGACCA 20 20 50.0 50.0 57.9 57.1 0.0 0.0 1.030402 66708 67873 1365-1388 1.000000 76.2 psbE-petL_p3 psbE-petL 3 AGAACGTTCTCCTGTGCTTC GTCGTATCTTGCTCAGACCA 20 20 50.0 50.0 57.8 57.1 24.9 0.0 1.097796 66708 67873 1275-1298 1.000000 75.9 psbE-petL_p4 psbE-petL 4 ACGAATAACCAACCCGCAAT GTCGTATCTTGCTCAGACCA 20 20 45.0 50.0 58.2 57.1 0.0 0.0 1.112474 66708 67873 1361-1384 1.000000 75.5 psbE-petL_p5 psbE-petL 5 CGAATAACCAACCCGCAATG GTCGTATCTTGCTCAGACCA 20 20 50.0 50.0 57.8 57.1 0.0 0.0 1.128804 66708 67873 1360-1383 1.000000 75.4 ndhF_p1 ndhF 1 GCAGAATACCGTCACCCATT GAGGTAAGATCCGGTGAATCG 20 21 50.0 52.4 58.0 58.0 0.0 0.0 1.052991 111637 113853 2628-2634 1.000000 74.0 ndhF_p2 ndhF 2 GAGATCCGCCGAAGAAGATC GAGGTAAGATCCGGTGAATCG 20 21 55.0 52.4 57.9 58.0 0.0 0.0 1.073517 111637 113853 2492-2498 1.000000 73.9 ndhF_p3 ndhF 3 CAGGAACAAGAGAGATCCGC GAGGTAAGATCCGGTGAATCG 20 21 55.0 52.4 58.1 58.0 0.0 0.0 1.081357 111637 113853 2503-2509 1.000000 73.8 ndhF_p4 ndhF 4 CGCCGAAGAAGATCCTTCTC GAGGTAAGATCCGGTGAATCG 20 21 55.0 52.4 58.2 58.0 9.4 0.0 1.168063 111637 113853 2486-2487 0.956522 71.2 ndhF_p5 ndhF 5 GCCGAAGAAGATCCTTCTCC CGCTGTCCCATATCCTTTCC 20 20 55.0 55.0 57.8 58.1 9.4 0.0 0.348521 111637 113853 2996-3000 0.478261 58.8 ndhF-rpl32_p1 ndhF-rpl32 1 ACAAAAGGTATGATCCACGCA TGATGCAGAAGTACGTTTTT 21 20 42.9 35.0 57.9 53.5 0.0 0.0 5.602406 113854 114332 549-558 1.000000 46.1 ndhF-rpl32_p2 ndhF-rpl32 2 ACAAAAGGTATGATCCACGCA TTGATGCAGAAGTACGTTTT 21 20 42.9 35.0 57.9 53.5 0.0 0.0 5.602406 113854 114332 550-559 1.000000 46.1 ndhF-rpl32_p3 ndhF-rpl32 3 ACAAAAGGTATGATCCACGCA TTTGATGCAGAAGTACGTTT 21 20 42.9 35.0 57.9 53.5 0.0 0.0 5.602406 113854 114332 551-560 1.000000 46.0 ndhF-rpl32_p4 ndhF-rpl32 4 ACAAAAGGTATGATCCACGCA TTTTGATGCAGAAGTACGTT 21 20 42.9 35.0 57.9 53.5 0.0 0.0 5.602406 113854 114332 552-561 1.000000 46.0 ndhF-rpl32_p5 ndhF-rpl32 5 ACAAAAGGTATGATCCACGCA TTTTTGATGCAGAAGTACGT 21 20 42.9 35.0 57.9 53.5 0.0 0.0 5.602406 113854 114332 553-562 1.000000 46.0 rpl32-trnL(UAG)_p1 rpl32-trnL(UAG) 1 ACCGGGAATTCAAAAAGTTT TCCTAAGAGCAGCGTGTCTA 20 20 35.0 50.0 53.9 57.9 6.3 0.0 4.271580 114492 115350 626-949 1.000000 53.4 rpl32-trnL(UAG)_p2 rpl32-trnL(UAG) 2 ACCGGGAATTCAAAAAGTTT AGCAGCGTGTCTACCAATTT 20 20 35.0 45.0 53.9 57.8 6.3 0.0 4.332307 114492 115350 619-942 1.000000 53.0 rpl32-trnL(UAG)_p3 rpl32-trnL(UAG) 3 ACCGGGAATTCAAAAAGTTT CCTAAGAGCAGCGTGTCTAC 20 20 35.0 55.0 53.9 57.8 6.3 0.0 4.343598 114492 115350 625-948 1.000000 52.8 rpl32-trnL(UAG)_p4 rpl32-trnL(UAG) 4 ACCGGGAATTCAAAAAGTTT CTAAGAGCAGCGTGTCTACC 20 20 35.0 55.0 53.9 57.8 6.3 0.0 4.343598 114492 115350 624-947 1.000000 52.8 rpl32-trnL(UAG)_p5 rpl32-trnL(UAG) 5 ACCGGGAATTCAAAAAGTTTT TCCTAAGAGCAGCGTGTCTA 21 20 33.3 50.0 54.7 57.9 6.3 0.0 4.392932 114492 115350 626-949 1.000000 52.4 rps15-trnN(GUU)_p1 rps15-trnN(GUU) 1 CTGACAGCGTTTTCAAATCGA AGCCCAGTTTATGAAGATTCT 21 21 42.9 38.1 57.5 54.6 4.8 0.0 5.933414 129396 129515 200-212 1.000000 48.9 rps15-trnN(GUU)_p2 rps15-trnN(GUU) 2 TCTGACAGCGTTTTCAAATCG AGCCCAGTTTATGAAGATTCT 21 21 42.9 38.1 57.5 54.6 0.0 0.0 5.933414 129396 129515 201-213 1.000000 48.9 rps15-trnN(GUU)_p3 rps15-trnN(GUU) 3 CTGACAGCGTTTTCAAATCGA AGCCCAGTTTATGAAGATTCTT 21 22 42.9 36.4 57.5 55.4 4.8 0.0 6.117379 129396 129515 200-212 1.000000 48.9 rps15-trnN(GUU)_p4 rps15-trnN(GUU) 4 TCTGACAGCGTTTTCAAATCG AGCCCAGTTTATGAAGATTCTT 21 22 42.9 36.4 57.5 55.4 0.0 0.0 6.117379 129396 129515 201-213 1.000000 48.9 rps15-trnN(GUU)_p5 rps15-trnN(GUU) 5 TGACAGCGTTTTCAAATCGA AGCCCAGTTTATGAAGATTCT 20 21 40.0 38.1 56.3 54.6 4.8 0.0 6.106227 129396 129515 199-211 1.000000 48.6