primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score ccsA_p1 ccsA 1 TGACGATCATAACAAAACGA TTACATCGCCAACCGCTTTA 20 20 35.0 45.0 53.0 57.9 0.0 0.0 5.080174 69 188 628-628 0.250000 10.0 ccsA_p2 ccsA 2 TGACGATCATAACAAAACGA GGCAAAATTCCGGGCATTTT 20 20 35.0 45.0 53.0 58.2 0.0 11.0 5.164026 69 188 793-793 0.250000 10.0 ccsA_p3 ccsA 3 TGACGATCATAACAAAACGA TACATCGCCAACCGCTTTAT 20 20 35.0 45.0 53.0 57.7 0.0 0.0 5.303091 69 188 627-627 0.250000 10.0 ccsA_p4 ccsA 4 ATGACGATCATAACAAAACGA TTACATCGCCAACCGCTTTA 21 20 33.3 45.0 53.7 57.9 0.0 0.0 5.410012 69 188 629-629 0.250000 10.0 ccsA_p5 ccsA 5 TGACGATCATAACAAAACGAT TTACATCGCCAACCGCTTTA 21 20 33.3 45.0 53.7 57.9 0.0 0.0 5.410012 69 188 628-628 0.250000 10.0 orf274-atpI_p1 orf274-atpI 1 CAGAGTGCTTATCTGGCTGG TCATTAGTAGGGGCCGCTAA 20 20 55.0 50.0 58.0 57.9 5.7 29.4 0.140270 30422 31806 2272-2431 0.500000 59.9 orf274-atpI_p2 orf274-atpI 2 CACGTTAGGTGGAGGTTCAG TCATTAGTAGGGGCCGCTAA 20 20 55.0 50.0 57.9 57.9 0.0 29.4 0.171384 30422 31806 2471-2630 0.500000 59.7 orf274-atpI_p3 orf274-atpI 3 CGTTAGGTGGAGGTTCAGTG TCATTAGTAGGGGCCGCTAA 20 20 55.0 50.0 57.9 57.9 0.0 29.4 0.171384 30422 31806 2469-2628 0.500000 59.7 orf274-atpI_p4 orf274-atpI 4 CAGAGTGCTTATCTGGCTGG CCCCCAAAACGATCCATGAA 20 20 55.0 50.0 58.0 58.2 5.7 0.0 0.203165 30422 31806 2016-2175 0.500000 59.5 orf274-atpI_p5 orf274-atpI 5 CAGAGTGCTTATCTGGCTGG AATCGCCACGGTAATAGAGC 20 20 55.0 50.0 58.0 57.8 5.7 0.0 0.199569 30422 31806 2230-2389 0.500000 59.4 trnG(ucc)-trnMe(cau)_p1 trnG(ucc)-trnMe(cau) 1 CGACATTGGACTTGGAAGGA GGATGCTCTGACCAACTGAG 20 20 50.0 55.0 57.5 58.0 0.0 0.0 0.494051 46245 46390 225-252 1.000000 88.0 trnG(ucc)-trnMe(cau)_p2 trnG(ucc)-trnMe(cau) 2 CGACATTGGACTTGGAAGGA ATGAAACGGATGCTCTGACC 20 20 50.0 50.0 57.5 58.0 0.0 0.0 0.502534 46245 46390 232-259 1.000000 88.0 trnG(ucc)-trnMe(cau)_p3 trnG(ucc)-trnMe(cau) 3 CGACATTGGACTTGGAAGGA CTAGTGACATCCCGCGTATG 20 20 50.0 55.0 57.5 57.9 0.0 15.0 0.524574 46245 46390 249-276 1.000000 87.8 trnG(ucc)-trnMe(cau)_p4 trnG(ucc)-trnMe(cau) 4 CGACATTGGACTTGGAAGGA ACCAACTGAGCTAAACAGGC 20 20 50.0 50.0 57.5 58.1 0.0 5.9 0.575136 46245 46390 215-242 1.000000 87.4 trnG(ucc)-trnMe(cau)_p5 trnG(ucc)-trnMe(cau) 5 ACATTGGACTTGGAAGGACC GGATGCTCTGACCAACTGAG 20 20 50.0 55.0 57.4 58.0 0.0 0.0 0.608004 46245 46390 223-250 1.000000 87.1 ycf1-ycf4_p1 ycf1-ycf4 1 GTCATTGTTCCAATCGCAGC GGAATGTTGGAGGTGGGTTT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.109444 56941 57463 1310-1316 0.500000 60.7 ycf1-ycf4_p2 ycf1-ycf4 2 GTCATTGTTCCAATCGCAGC TGTTGGAGGTGGGTTTAACG 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.129671 56941 57463 1306-1312 0.500000 60.6 ycf1-ycf4_p3 ycf1-ycf4 3 GCAGTCATTGTTCCAATCGC GGAATGTTGGAGGTGGGTTT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.109444 56941 57463 1313-1313 0.250000 49.1 ycf1-ycf4_p4 ycf1-ycf4 4 GCAGTCATTGTTCCAATCGC TGTTGGAGGTGGGTTTAACG 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.129671 56941 57463 1309-1309 0.250000 49.0 ycf1-ycf4_p5 ycf1-ycf4 5 CGCAGTCATTGTTCCAATCG GGAATGTTGGAGGTGGGTTT 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.173507 56941 57463 1314-1314 0.250000 48.6 psbI_p1 psbI 1 CGATATATCGGACCCAATGGG ACCAAGCAAAGCTTCTACGA 21 20 52.4 45.0 57.8 57.5 24.4 0.0 1.723220 60094 62608 2988-2988 0.250000 36.2 psbI_p2 psbI 2 CGATATATCGGACCCAATGGG AACCAAGCAAAGCTTCTACGA 21 21 52.4 42.9 57.8 58.2 24.4 0.0 2.333250 60094 62608 2989-2989 0.250000 31.3 psbI_p3 psbI 3 CGATATATCGGACCCAATGGG ACCAAGCAAAGCTTCTACGAA 21 21 52.4 42.9 57.8 58.2 24.4 0.0 2.333250 60094 62608 2988-2988 0.250000 31.3 psbI_p4 psbI 4 CGATATATCGGACCCAATGGG AACCAAGCAAAGCTTCTACG 21 20 52.4 45.0 57.8 56.6 24.4 0.0 2.530630 60094 62608 2989-2989 0.250000 29.8 psbI_p5 psbI 5 CGATATATCGGACCCAATGGG AAACCAAGCAAAGCTTCTACG 21 21 52.4 42.9 57.8 57.4 24.4 0.0 2.805471 60094 62608 2990-2990 0.250000 27.6 orf458_p1 orf458 1 GCAGATTTTCGCAAGGCATT AAAGCCAATGGTACCTAGCG 20 20 45.0 50.0 58.0 58.0 0.0 14.4 0.038816 60573 61949 1782-1962 0.750000 81.7 orf458_p2 orf458 2 GCAGATTTTCGCAAGGCATT GTACCCAATTTCAGGTGGCA 20 20 45.0 50.0 58.0 58.1 0.0 2.5 0.082557 60573 61949 2148-2325 0.750000 81.3 orf458_p3 orf458 3 GCAGATTTTCGCAAGGCATT GAGCTGGTGGATTTTCCGAA 20 20 45.0 50.0 58.0 58.2 0.0 0.0 0.179213 60573 61949 1647-1828 0.750000 80.6 orf458_p4 orf458 4 CCCCTAAGAACCGTACATGC AAAGCCAATGGTACCTAGCG 20 20 55.0 50.0 58.1 58.0 0.0 14.4 0.088922 60573 61949 1929-2005 0.500000 61.1 orf458_p5 orf458 5 CCCCTAAGAACCGTACATGC GTACCCAATTTCAGGTGGCA 20 20 55.0 50.0 58.1 58.1 0.0 2.5 0.132663 60573 61949 2292-2368 0.500000 60.7 orf458-rps12_p1 orf458-rps12 1 TCGATTTGAGTGCGCTGTTA TTTAGTTCGTGGTGGTCGTG 20 20 45.0 50.0 57.9 58.1 3.4 0.0 0.217603 61950 62873 1261-1268 0.500000 59.8 orf458-rps12_p2 orf458-rps12 2 TCGATTTGAGTGCGCTGTTA CGTGGTGGTCGTGTAAAAGA 20 20 45.0 50.0 57.9 58.1 3.4 0.0 0.217603 61950 62873 1254-1261 0.500000 59.7 orf458-rps12_p3 orf458-rps12 3 TCGATTTGAGTGCGCTGTTA TCGTGGTGGTCGTGTAAAAG 20 20 45.0 50.0 57.9 58.1 3.4 0.0 0.217603 61950 62873 1255-1262 0.500000 59.7 orf458-rps12_p4 orf458-rps12 4 GGGTTCGAGGGCTGTTTTTA CGTGGTGGTCGTGTAAAAGA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.244241 61950 62873 1524-1531 0.500000 59.7 orf458-rps12_p5 orf458-rps12 5 GGGTTCGAGGGCTGTTTTTA TCGTGGTGGTCGTGTAAAAG 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.244241 61950 62873 1525-1532 0.500000 59.7 orf212_p1 orf212 1 TCCAATGGTCTTGGGGATCT AAGTCGGAGTTCCTGAGACA 20 20 50.0 50.0 58.0 58.0 0.0 7.2 0.017580 87459 88100 1227-1227 0.250000 49.9 orf212_p2 orf212 2 TCCAATGGTCTTGGGGATCT ACAAGTCGGAGTTCCTGAGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.017580 87459 88100 1229-1229 0.250000 49.9 orf212_p3 orf212 3 TCCAATGGTCTTGGGGATCT AGTCGGAGTTCCTGAGACAA 20 20 50.0 50.0 58.0 58.0 0.0 7.2 0.017580 87459 88100 1226-1226 0.250000 49.9 orf212_p4 orf212 4 TCCAATGGTCTTGGGGATCT ACTACGTTGAATCGCTGGAC 20 20 50.0 50.0 58.0 58.0 0.0 3.4 0.022209 87459 88100 921-921 0.250000 49.8 orf212_p5 orf212 5 TCCAATGGTCTTGGGGATCT AAGACCCTTTTGGACTGCAG 20 20 50.0 50.0 58.0 58.0 0.0 13.5 0.027496 87459 88100 1317-1317 0.250000 49.8 orf258-orf532_p1 orf258-orf532 1 ACACACAAAGGTCTTTCGCT TCAAAATGGGGTGTCTAAGCA 20 21 45.0 42.9 58.0 57.5 0.0 0.0 1.555683 97798 97917 709-709 0.250000 37.6 orf258-orf532_p2 orf258-orf532 2 CGGGTAATACTCAGCCAACC TCAAAATGGGGTGTCTAAGCA 20 21 55.0 42.9 58.1 57.5 0.0 0.0 1.567831 97798 97917 919-919 0.250000 37.5 orf258-orf532_p3 orf258-orf532 3 CACACACAAAGGTCTTTCGC TCAAAATGGGGTGTCTAAGCA 20 21 50.0 42.9 57.9 57.5 0.0 0.0 1.622619 97798 97917 710-710 0.250000 37.0 orf258-orf532_p4 orf258-orf532 4 ACACACAAAGGTCTTTCGCT TGGGGTGTCTAAGCAAAAAGA 20 21 45.0 42.9 58.0 57.4 0.0 0.0 1.624857 97798 97917 703-703 0.250000 37.0 orf258-orf532_p5 orf258-orf532 5 CGGGTAATACTCAGCCAACC TGGGGTGTCTAAGCAAAAAGA 20 21 55.0 42.9 58.1 57.4 0.0 0.0 1.637005 97798 97917 913-913 0.250000 36.9 orf532_p1 orf532 1 GAATTCTACCACACACGGGG ACAAGTTTTGCAACGTAGCG 20 20 55.0 45.0 58.3 57.9 0.0 0.0 0.365470 98151 99752 2594-2594 0.250000 47.1 orf532_p2 orf532 2 CGGTTGAATGCGGCATTAAA ACAAGTTTTGCAACGTAGCG 20 20 45.0 45.0 57.7 57.9 26.7 0.0 0.369908 98151 99752 2615-2615 0.250000 47.0 orf532_p3 orf532 3 GCCGTAAATCCTGAACCGAA ACAAGTTTTGCAACGTAGCG 20 20 50.0 45.0 58.3 57.9 0.0 0.0 0.370350 98151 99752 2782-2782 0.250000 47.0 orf532_p4 orf532 4 ACACGGGGAATTAAAAGGCA ACAAGTTTTGCAACGTAGCG 20 20 45.0 45.0 57.7 57.9 0.0 0.0 0.395706 98151 99752 2582-2582 0.250000 46.8 orf532_p5 orf532 5 GAATTCTACCACACACGGGG CAAGTTTTGCAACGTAGCGA 20 20 55.0 45.0 58.3 57.6 0.0 0.0 0.642752 98151 99752 2593-2593 0.250000 44.9 trnL(caa)-psaA_p1 trnL(caa)-psaA 1 TACCGTTCCATCATAAGGGC ACTCTTTTTGCTTCACTTTCTGG 20 23 50.0 39.1 57.1 57.7 0.0 0.0 4.177078 114909 115496 646-704 1.000000 58.6 trnL(caa)-psaA_p2 trnL(caa)-psaA 2 TACCGTTCCATCATAAGGGC CTCTTTTTGCTTCACTTTCTGGA 20 23 50.0 39.1 57.1 57.5 0.0 0.0 4.427913 114909 115496 645-703 1.000000 56.6 trnL(caa)-psaA_p3 trnL(caa)-psaA 3 TACCGTTCCATCATAAGGGC TCTTTTTGCTTCACTTTCTGGAG 20 23 50.0 39.1 57.1 57.5 0.0 0.0 4.427913 114909 115496 644-702 1.000000 56.6 trnL(caa)-psaA_p4 trnL(caa)-psaA 4 CTACCGTTCCATCATAAGGGC ACTCTTTTTGCTTCACTTTCTGG 21 23 52.4 39.1 58.2 57.7 0.0 0.0 4.486834 114909 115496 647-705 1.000000 56.1 trnL(caa)-psaA_p5 trnL(caa)-psaA 5 TACCGTTCCATCATAAGGGC TCTTTTTGCTTCACTTTCTGGA 20 22 50.0 36.4 57.1 56.4 0.0 0.0 4.526887 114909 115496 644-702 1.000000 55.8 psaC_p1 psaC 1 TGGTTCGAAGCCAGAAACTC GGGACTGATTTACCACCAGG 20 20 50.0 55.0 58.1 57.6 23.5 0.0 0.541105 125749 127621 2788-2825 0.500000 58.3 psaC_p2 psaC 2 ATGGGTGCGACTCGTTTAAA GGGACTGATTTACCACCAGG 20 20 45.0 55.0 57.8 57.6 0.0 0.0 0.592910 125749 127621 2942-2979 0.500000 58.2 psaC_p3 psaC 3 TGGGTGCGACTCGTTTAAAT GGGACTGATTTACCACCAGG 20 20 45.0 55.0 57.8 57.6 0.0 0.0 0.592910 125749 127621 2941-2978 0.500000 58.2 psaC_p4 psaC 4 GGTTCGAAGCCAGAAACTCT GGGACTGATTTACCACCAGG 20 20 50.0 55.0 57.8 57.6 16.4 0.0 0.591399 125749 127621 2787-2824 0.500000 57.9 psaC_p5 psaC 5 AGTATATGGGTGCGACTCGT GGGACTGATTTACCACCAGG 20 20 50.0 55.0 58.3 57.6 0.0 0.0 0.731286 125749 127621 2947-2984 0.500000 57.1 rpoA_p1 rpoA 1 CTTTCCTTTTGTCGTGCTGC CCAGGGGTCATCAAATCGAG 20 20 50.0 55.0 58.2 58.0 0.0 0.0 0.282175 159073 160320 2266-2276 0.500000 60.6 rpoA_p2 rpoA 2 CTTTCCTTTTGTCGTGCTGC GAATGCCCTCAGTCGGATTT 20 20 50.0 50.0 58.2 58.0 0.0 0.0 0.285340 159073 160320 2123-2132 0.500000 60.6 rpoA_p3 rpoA 3 CTTTCCTTTTGTCGTGCTGC TCCGCTGAGCTCCATTAAAC 20 20 50.0 50.0 58.2 58.0 0.0 12.1 0.265392 159073 160320 2631-2641 0.500000 60.3 rpoA_p4 rpoA 4 CTTTCCTTTTGTCGTGCTGC GTATGAATGCCCTCAGTCGG 20 20 50.0 55.0 58.2 58.1 0.0 0.0 0.370137 159073 160320 2127-2136 0.500000 59.9 rpoA_p5 rpoA 5 CTTTCCTTTTGTCGTGCTGC TTGAACGTGAAGTGCGTACA 20 20 50.0 45.0 58.2 58.1 0.0 6.4 0.317318 159073 160320 2182-2182 0.250000 47.5 orf532-orf258_p1 orf532-orf258 1 AGCGAAAGACCTTTGTGTGT ACGACAAACTGCGCTCTATT 20 20 45.0 45.0 58.0 57.9 0.0 9.7 0.118673 178653 178772 1334-1334 0.250000 49.1 orf532-orf258_p2 orf532-orf258 2 AGCGAAAGACCTTTGTGTGT ATTACGACAAACTGCGCTCT 20 20 45.0 45.0 58.0 57.9 0.0 9.7 0.118673 178653 178772 1337-1337 0.250000 49.1 orf532-orf258_p3 orf532-orf258 3 GGTTGGCTGAGTATTACCCG ACGACAAACTGCGCTCTATT 20 20 55.0 45.0 58.1 57.9 0.0 9.7 0.130821 178653 178772 1124-1124 0.250000 49.0 orf532-orf258_p4 orf532-orf258 4 GGTTGGCTGAGTATTACCCG ATTACGACAAACTGCGCTCT 20 20 55.0 45.0 58.1 57.9 0.0 9.7 0.130821 178653 178772 1127-1127 0.250000 49.0 orf532-orf258_p5 orf532-orf258 5 AGCGAAAGACCTTTGTGTGT TACTTGGCGCAACATTTCCT 20 20 45.0 45.0 58.0 58.1 0.0 10.8 0.134100 178653 178772 1525-1525 0.250000 48.9 orf258_p1 orf258 1 AACGCAATTGAAAACCCGAC CAATCCTTGGAGATGCCGAA 20 20 45.0 50.0 57.9 58.0 10.3 0.0 0.171053 182509 183288 1462-1462 0.250000 48.6 orf258_p2 orf258 2 AACGCAATTGAAAACCCGAC CAACAATTTCCGACTGCGAC 20 20 45.0 50.0 57.9 58.0 10.3 0.0 0.177896 182509 183288 1595-1595 0.250000 48.6 orf258_p3 orf258 3 AACGCAATTGAAAACCCGAC TGCCGAAGTTCTAGCTGTTC 20 20 45.0 50.0 57.9 57.9 10.3 13.8 0.208653 182509 183288 1449-1449 0.250000 48.3 orf258_p4 orf258 4 AACGCAATTGAAAACCCGAC TCCGACTGCGACAATTTGAT 20 20 45.0 45.0 57.9 57.9 10.3 2.8 0.221674 182509 183288 1587-1587 0.250000 48.2 orf258_p5 orf258 5 AACGCAATTGAAAACCCGAC GTGAGCACCAAATTCATCGC 20 20 45.0 50.0 57.9 58.1 10.3 0.0 0.228130 182509 183288 1492-1492 0.250000 48.2 orf258-orf212_p1 orf258-orf212 1 TAAAACGGCCAATTGTCCCA CCGTTAAATCCAGCAGTCGA 20 20 45.0 50.0 58.0 58.0 2.2 0.0 0.007784 185375 185524 925-925 0.250000 49.9 orf258-orf212_p2 orf258-orf212 2 TAAAACGGCCAATTGTCCCA TCCGTTAAATCCAGCAGTCG 20 20 45.0 50.0 58.0 58.0 2.2 0.0 0.007784 185375 185524 926-926 0.250000 49.9 orf258-orf212_p3 orf258-orf212 3 TAAAACGGCCAATTGTCCCA GATGCAAAACTGATTGGGGC 20 20 45.0 50.0 58.0 58.0 2.2 0.0 0.017537 185375 185524 490-490 0.250000 49.9 orf258-orf212_p4 orf258-orf212 4 TAAAACGGCCAATTGTCCCA AGAAGGTCCGGGTGACTTTA 20 20 45.0 50.0 58.0 58.0 2.2 0.0 0.023009 185375 185524 899-899 0.250000 49.8 orf258-orf212_p5 orf258-orf212 5 TAAAACGGCCAATTGTCCCA AAAAAGAAGGTCCGGGTGAC 20 20 45.0 50.0 58.0 58.0 2.2 0.0 0.026145 185375 185524 903-903 0.250000 49.8 orf212-psbA_p1 orf212-psbA 1 TGATTTGTACACGCCGGTAG ACAACGTCAGTGTTTCTCCC 20 20 50.0 50.0 58.0 58.1 1.9 0.0 0.051486 187895 189333 2387-2387 0.250000 49.6 orf212-psbA_p2 orf212-psbA 2 CATCGACCGTGTCACATTCT ACAACGTCAGTGTTTCTCCC 20 20 50.0 50.0 58.0 58.1 3.4 0.0 0.054243 187895 189333 2236-2236 0.250000 49.6 orf212-psbA_p3 orf212-psbA 3 TTCAACGCCAGCTATCTGAC ACAACGTCAGTGTTTCTCCC 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.060680 187895 189333 2605-2605 0.250000 49.5 orf212-psbA_p4 orf212-psbA 4 CCGGTAGATTCCTACGAGGT ACAACGTCAGTGTTTCTCCC 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.072080 187895 189333 2374-2374 0.250000 49.4 orf212-psbA_p5 orf212-psbA 5 ACCACAGTGGGGTAATAGCT ACAACGTCAGTGTTTCTCCC 20 20 50.0 50.0 58.0 58.1 17.8 0.0 0.083690 187895 189333 2328-2328 0.250000 49.3