primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-rps16_p1 trnK-rps16 1 AAAGCCGAGTACTCTACCGT ACCTAATCAAACGAAATTCAAT 20 22 50.0 27.3 58.2 52.4 20.3 0.0 7.802566 4408 5313 957-965 1.000000 41.6 trnK-rps16_p2 trnK-rps16 2 AAGCCGAGTACTCTACCGTT ACCTAATCAAACGAAATTCAAT 20 22 50.0 27.3 58.2 52.4 20.3 0.0 7.802566 4408 5313 956-964 1.000000 41.6 trnK-rps16_p3 trnK-rps16 3 TCTAGCCGCACTTAAAAGCC ACCTAATCAAACGAAATTCAAT 20 22 50.0 27.3 58.3 52.4 0.0 0.0 7.899983 4408 5313 971-979 1.000000 41.6 trnK-rps16_p4 trnK-rps16 4 CCGCACTTAAAAGCCGAGTA ACCTAATCAAACGAAATTCAAT 20 22 50.0 27.3 58.3 52.4 5.3 0.0 7.916952 4408 5313 966-974 1.000000 41.6 trnK-rps16_p5 trnK-rps16 5 AAGCCGAGTACTCTACCGTT ACCTAATCAAACGAAATTCAATT 20 23 50.0 26.1 58.2 53.2 20.3 0.0 7.936638 4408 5313 956-964 1.000000 41.6 atpH-atpI_p1 atpH-atpI 1 AACAGAAGCGGCAGAAATCA TCCCTGTCATGTTCCTTGGA 20 20 45.0 50.0 58.1 58.3 1.4 0.0 0.362752 14297 15365 1086-1203 1.000000 81.5 atpH-atpI_p2 atpH-atpI 2 TACCCTCTACAGCTTGACCC TCCCTGTCATGTTCCTTGGA 20 20 55.0 50.0 58.1 58.3 0.0 0.0 0.396990 14297 15365 1171-1288 1.000000 81.2 atpH-atpI_p3 atpH-atpI 3 GCGATACCCTCTACAGCTTG TCCCTGTCATGTTCCTTGGA 20 20 55.0 50.0 57.9 58.3 0.0 0.0 0.400507 14297 15365 1175-1292 1.000000 81.2 atpH-atpI_p4 atpH-atpI 4 CAGCAGCAATAACAGAAGCG TCCCTGTCATGTTCCTTGGA 20 20 50.0 50.0 57.8 58.3 0.0 0.0 0.428635 14297 15365 1096-1213 1.000000 81.0 atpH-atpI_p5 atpH-atpI 5 GCCAATCCAGCAGCAATAAC TCCCTGTCATGTTCCTTGGA 20 20 50.0 50.0 57.8 58.3 0.0 0.0 0.473359 14297 15365 1103-1220 1.000000 80.6 rps2-rpoC2_p1 rps2-rpoC2 1 AACTCCTGCCTCCATCATCT TTCGAGGGGGAAATGAGAGA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.357147 17042 17249 377-386 1.000000 78.4 rps2-rpoC2_p2 rps2-rpoC2 2 TGCCTCCATCATCTCTTCCA TTCGAGGGGGAAATGAGAGA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.364021 17042 17249 371-380 1.000000 78.4 rps2-rpoC2_p3 rps2-rpoC2 3 TCCTGCCTCCATCATCTCTT TTCGAGGGGGAAATGAGAGA 20 20 50.0 50.0 57.8 57.8 0.0 0.0 0.434938 17042 17249 374-383 1.000000 77.8 rps2-rpoC2_p4 rps2-rpoC2 4 GAACTCCTGCCTCCATCATC TTCGAGGGGGAAATGAGAGA 20 20 55.0 50.0 57.7 57.8 0.0 0.0 0.500676 17042 17249 378-387 1.000000 77.3 rps2-rpoC2_p5 rps2-rpoC2 5 CTCCTGCCTCCATCATCTCT TTCGAGGGGGAAATGAGAGA 20 20 55.0 50.0 58.3 57.8 0.0 0.0 0.528170 17042 17249 375-384 1.000000 77.0 petN-psbM_p1 petN-psbM 1 ACTCGTAGTGTGGGGAAGAA GCGACTGCACTATTCATTCT 20 20 50.0 45.0 58.0 55.9 0.0 0.0 2.059024 29754 30919 1275-1327 1.000000 64.3 petN-psbM_p2 petN-psbM 2 TCGTAGTGTGGGGAAGAAGT GCGACTGCACTATTCATTCT 20 20 50.0 45.0 58.0 55.9 0.0 0.0 2.059024 29754 30919 1273-1325 1.000000 64.3 petN-psbM_p3 petN-psbM 3 CGTAGTGTGGGGAAGAAGTG GCGACTGCACTATTCATTCT 20 20 55.0 45.0 57.9 55.9 0.0 0.0 2.133939 29754 30919 1272-1324 1.000000 63.7 petN-psbM_p4 petN-psbM 4 TAGTGTGGGGAAGAAGTGGA GCGACTGCACTATTCATTCT 20 20 50.0 45.0 57.6 55.9 0.0 0.0 2.462717 29754 30919 1270-1322 1.000000 61.0 petN-psbM_p5 petN-psbM 5 CCTGGGCTGCTTTAATGGTA GCGACTGCACTATTCATTCT 20 20 50.0 45.0 57.6 55.9 0.0 0.0 2.489026 29754 30919 1315-1367 1.000000 60.8 psbM-trnD(GUC)_p1 psbM-trnD(GUC) 1 CTGCCGATTATAGTCCGCTC AGATCCCGCGAGTCTAATCA 20 20 55.0 50.0 58.0 58.0 9.3 8.2 0.033367 31025 31669 1379-1379 1.000000 80.7 psbM-trnD(GUC)_p2 psbM-trnD(GUC) 2 CTGCCGATTATAGTCCGCTC CCTACGCTGGTTCAAATCCA 20 20 55.0 50.0 58.0 57.9 9.3 0.0 0.123978 31025 31669 1097-1097 1.000000 80.1 psbM-trnD(GUC)_p3 psbM-trnD(GUC) 3 TCATGGTTCGGGCGTTAAAA AGATCCCGCGAGTCTAATCA 20 20 45.0 50.0 58.1 58.0 0.0 8.2 0.123795 31025 31669 1886-1934 1.000000 79.8 psbM-trnD(GUC)_p4 psbM-trnD(GUC) 4 GGTTCGGGCGTTAAAAATCG AGATCCCGCGAGTCTAATCA 20 20 50.0 50.0 58.1 58.0 0.0 8.2 0.131303 31025 31669 1882-1930 1.000000 79.7 psbM-trnD(GUC)_p5 psbM-trnD(GUC) 5 GTTCGGGCGTTAAAAATCGG AGATCCCGCGAGTCTAATCA 20 20 50.0 50.0 58.1 58.0 0.0 8.2 0.131303 31025 31669 1881-1929 1.000000 79.7 psbZ-trnG(GCC)_p1 psbZ-trnG(GCC) 1 TTGCTTCTCCTGATGGTTGG AATCGAACCCGCATCTTCTC 20 20 50.0 50.0 57.8 58.1 0.0 0.0 0.263697 37528 37817 458-501 1.000000 79.8 psbZ-trnG(GCC)_p2 psbZ-trnG(GCC) 2 TTGCTTCTCCTGATGGTTGG GAATCGAACCCGCATCTTCT 20 20 50.0 50.0 57.8 58.1 0.0 0.0 0.263697 37528 37817 459-502 1.000000 79.8 psbZ-trnG(GCC)_p3 psbZ-trnG(GCC) 3 GCTTCTCCTGATGGTTGGTC AATCGAACCCGCATCTTCTC 20 20 55.0 50.0 58.3 58.1 0.0 0.0 0.314679 37528 37817 456-499 1.000000 79.4 psbZ-trnG(GCC)_p4 psbZ-trnG(GCC) 4 GCTTCTCCTGATGGTTGGTC GAATCGAACCCGCATCTTCT 20 20 55.0 50.0 58.3 58.1 0.0 0.0 0.314679 37528 37817 457-500 1.000000 79.4 psbZ-trnG(GCC)_p5 psbZ-trnG(GCC) 5 GGGTTAGTCTTTCTGGTGGG AATCGAACCCGCATCTTCTC 20 20 55.0 50.0 57.5 58.1 0.0 0.0 0.550350 37528 37817 393-436 1.000000 77.8 ycf3-trnS(GGA)_p1 ycf3-trnS(GGA) 1 CATTTATCCGCGATCTAGGCA CCCTCGGTAAACAAAAGCCT 21 20 47.6 50.0 58.0 58.1 8.2 0.0 1.134847 45891 46674 887-887 1.000000 71.5 ycf3-trnS(GGA)_p2 ycf3-trnS(GGA) 2 CATTTATCCGCGATCTAGGCA ACGGAAAGAGAGGGATTCGA 21 20 47.6 50.0 58.0 58.2 8.2 0.0 1.191833 45891 46674 908-908 1.000000 71.0 ycf3-trnS(GGA)_p3 ycf3-trnS(GGA) 3 CATTTATCCGCGATCTAGGCA TTCCAATGCTACGCCTTGAA 21 20 47.6 45.0 58.0 57.8 8.2 5.6 1.233148 45891 46674 858-858 1.000000 70.7 ycf3-trnS(GGA)_p4 ycf3-trnS(GGA) 4 CATTTATCCGCGATCTAGGCA ACCCTCGGTAAACAAAAGCC 21 20 47.6 50.0 58.0 58.4 8.2 0.0 1.427808 45891 46674 888-888 1.000000 69.1 ycf3-trnS(GGA)_p5 ycf3-trnS(GGA) 5 TTTATCCGCGATCTAGGCAT CCCTCGGTAAACAAAAGCCT 20 20 45.0 50.0 56.6 58.1 8.2 0.0 1.514239 45891 46674 885-885 1.000000 68.4 rbcL-accD_p1 rbcL-accD 1 GAGGCTAGCAAATGGAGTCC ACCTGCGTTCTAACTCCTTC 20 20 55.0 50.0 58.0 57.3 18.2 0.0 0.785098 58113 58775 838-846 1.000000 74.2 rbcL-accD_p2 rbcL-accD 2 ATTTGAGTTTGCCGCAATGG ACCTGCGTTCTAACTCCTTC 20 20 45.0 50.0 57.9 57.3 6.6 0.0 0.828681 58113 58775 779-787 1.000000 73.9 rbcL-accD_p3 rbcL-accD 3 GCTGCTTGTGAGGTATGGAA ACCTGCGTTCTAACTCCTTC 20 20 50.0 50.0 57.9 57.3 0.0 0.0 0.859375 58113 58775 808-816 1.000000 73.6 rbcL-accD_p4 rbcL-accD 4 TGAGTTTGCCGCAATGGATA ACCTGCGTTCTAACTCCTTC 20 20 45.0 50.0 57.9 57.3 6.6 0.0 0.866806 58113 58775 776-784 1.000000 73.6 rbcL-accD_p5 rbcL-accD 5 AGTTTGCCGCAATGGATACT ACCTGCGTTCTAACTCCTTC 20 20 45.0 50.0 57.9 57.3 6.6 0.0 0.874285 58113 58775 774-782 1.000000 73.5 ycf4-cemA_p1 ycf4-cemA 1 CATTCCCTTGACCCGTACTG GAGAAATCCACCAGGGCAAA 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.100820 62048 62916 1044-1056 1.000000 79.7 ycf4-cemA_p2 ycf4-cemA 2 ATTCCCTTGACCCGTACTGA GAGAAATCCACCAGGGCAAA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.129660 62048 62916 1043-1055 1.000000 79.5 ycf4-cemA_p3 ycf4-cemA 3 TTCCCTTGACCCGTACTGAT GAGAAATCCACCAGGGCAAA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.129660 62048 62916 1042-1054 1.000000 79.5 ycf4-cemA_p4 ycf4-cemA 4 CTTGCGCGTACCAATTGAAG GAGAAATCCACCAGGGCAAA 20 20 50.0 50.0 58.1 58.1 8.4 0.0 0.194446 62048 62916 969-981 1.000000 79.0 ycf4-cemA_p5 ycf4-cemA 5 GAACAAAAAGCCGCCGAATT GAGAAATCCACCAGGGCAAA 20 20 45.0 50.0 58.2 58.1 0.0 0.0 0.298310 62048 62916 998-1010 1.000000 78.2 psbE-petL_p1 psbE-petL 1 CAACCCGCAATGAATAGGGA AGTTAAAGCCGCTAGTAAAA 20 20 50.0 35.0 57.9 52.5 6.4 0.0 5.513522 66543 67725 1335-1335 1.000000 41.1 psbE-petL_p2 psbE-petL 2 ACTGACGAATAACCAACCCG AGTTAAAGCCGCTAGTAAAA 20 20 50.0 35.0 57.9 52.5 0.0 0.0 5.551138 66543 67725 1348-1348 1.000000 41.1 psbE-petL_p3 psbE-petL 3 CAACCCGCAATGAATAGGGA AGTTAAAGCCGCTAGTAAAAA 20 21 50.0 33.3 57.9 53.5 6.4 0.0 5.580161 66543 67725 1335-1335 1.000000 41.1 psbE-petL_p4 psbE-petL 4 ACTGACGAATAACCAACCCG AGTTAAAGCCGCTAGTAAAAA 20 21 50.0 33.3 57.9 53.5 0.0 0.0 5.617776 66543 67725 1348-1348 1.000000 41.1 psbE-petL_p5 psbE-petL 5 AGAACGTTCTCCTGTGCTTC AGTTAAAGCCGCTAGTAAAA 20 20 50.0 35.0 57.8 52.5 24.9 0.0 5.618531 66543 67725 1258-1258 1.000000 41.1 trnP(UGG)-psaJ_p1 trnP(UGG)-psaJ 1 ACCCGTGACATTTTGTACCC TAGTACTGGTGCAACGGAGA 20 20 50.0 50.0 58.1 58.1 0.0 19.8 0.185977 68548 68948 489-506 1.000000 81.2 trnP(UGG)-psaJ_p2 trnP(UGG)-psaJ 2 CCCGTGACATTTTGTACCCA TAGTACTGGTGCAACGGAGA 20 20 50.0 50.0 58.1 58.1 0.0 19.8 0.187320 68548 68948 488-505 1.000000 81.2 trnP(UGG)-psaJ_p3 trnP(UGG)-psaJ 3 ACAGGATTTGAACCCGTGAC TAGTACTGGTGCAACGGAGA 20 20 50.0 50.0 58.1 58.1 0.0 19.8 0.194013 68548 68948 500-517 1.000000 81.1 trnP(UGG)-psaJ_p4 trnP(UGG)-psaJ 4 CAGGATTTGAACCCGTGACA TAGTACTGGTGCAACGGAGA 20 20 50.0 50.0 58.1 58.1 0.0 19.8 0.195346 68548 68948 499-516 1.000000 81.1 trnP(UGG)-psaJ_p5 trnP(UGG)-psaJ 5 TGACAGGATTTGAACCCGTG TAGTACTGGTGCAACGGAGA 20 20 50.0 50.0 58.1 58.1 0.0 19.8 0.195346 68548 68948 502-519 1.000000 81.1 ycf1_p1 ycf1 1 ACAGATGTCGTTTCTAGTCT TCTTAACTGGGGCGGTAAGA 20 20 40.0 50.0 53.5 58.1 0.0 0.0 4.593854 110530 111693 1393-1393 1.000000 43.6 ycf1_p2 ycf1 2 ACAGATGTCGTTTCTAGTCT AACATTCTTAACTGGGGCGG 20 20 40.0 50.0 53.5 58.2 0.0 0.0 4.701043 110530 111693 1398-1398 1.000000 42.7 ycf1_p3 ycf1 3 AACAGATGTCGTTTCTAGTCT TCTTAACTGGGGCGGTAAGA 21 20 38.1 50.0 54.4 58.1 0.0 0.0 4.702885 110530 111693 1394-1394 1.000000 42.7 ycf1_p4 ycf1 4 AACAGATGTCGTTTCTAGTCT AACATTCTTAACTGGGGCGG 21 20 38.1 50.0 54.4 58.2 0.0 0.0 4.810074 110530 111693 1399-1399 1.000000 41.9 ycf1_p5 ycf1 5 ACAGATGTCGTTTCTAGTCT CTTAACTGGGGCGGTAAGAG 20 20 40.0 55.0 53.5 57.7 0.0 0.0 4.846355 110530 111693 1392-1392 1.000000 41.6 rpl32-trnL(UAG)_p1 rpl32-trnL(UAG) 1 TGGGACAGCGTTAAAAGCAT TCCTAAGAGCAGCGTGTCTA 20 20 45.0 50.0 58.1 57.9 6.9 0.0 0.219990 114448 114989 669-681 1.000000 79.4 rpl32-trnL(UAG)_p2 rpl32-trnL(UAG) 2 TGGGACAGCGTTAAAAGCAT AGCAGCGTGTCTACCAATTT 20 20 45.0 45.0 58.1 57.8 6.9 0.0 0.280717 114448 114989 662-674 1.000000 79.0 rpl32-trnL(UAG)_p3 rpl32-trnL(UAG) 3 TGGGACAGCGTTAAAAGCAT CCTAAGAGCAGCGTGTCTAC 20 20 45.0 55.0 58.1 57.8 6.9 0.0 0.292008 114448 114989 668-680 1.000000 78.9 rpl32-trnL(UAG)_p4 rpl32-trnL(UAG) 4 TGGGACAGCGTTAAAAGCAT CTAAGAGCAGCGTGTCTACC 20 20 45.0 55.0 58.1 57.8 6.9 0.0 0.292008 114448 114989 667-679 1.000000 78.9 rpl32-trnL(UAG)_p5 rpl32-trnL(UAG) 5 TGGGACAGCGTTAAAAGCAT GAGCAGCGTGTCTACCAATT 20 20 45.0 50.0 58.1 58.3 6.9 0.0 0.368860 114448 114989 663-675 1.000000 78.3 ccsA-ndhD_p1 ccsA-ndhD 1 TTGTGGCGTCTATTGGCTTT TCAGTTGACAAGGTCGAAGT 20 20 45.0 45.0 58.1 56.7 0.0 0.0 1.366414 116132 116387 404-427 1.000000 72.0 ccsA-ndhD_p2 ccsA-ndhD 2 AATTGTGGCGTCTATTGGCT TCAGTTGACAAGGTCGAAGT 20 20 45.0 45.0 57.9 56.7 0.0 0.0 1.399471 116132 116387 406-429 1.000000 71.7 ccsA-ndhD_p3 ccsA-ndhD 3 ATTGTGGCGTCTATTGGCTT TCAGTTGACAAGGTCGAAGT 20 20 45.0 45.0 57.9 56.7 0.0 0.0 1.399471 116132 116387 405-428 1.000000 71.7 ccsA-ndhD_p4 ccsA-ndhD 4 TTGTGGCGTCTATTGGCTTT AGGTATTGGTATGTACCCCGA 20 21 45.0 47.6 58.1 57.7 0.0 6.7 1.429027 116132 116387 441-464 1.000000 71.2 ccsA-ndhD_p5 ccsA-ndhD 5 ATTGTGGCGTCTATTGGCTT AGGTATTGGTATGTACCCCGA 20 21 45.0 47.6 57.9 57.7 0.0 6.7 1.462084 116132 116387 442-465 1.000000 71.0 ndhD_p1 ndhD 1 AGTTGGGACCCAAAGGAAAC TGGCCCTCTCTCATAAACCA 20 20 50.0 50.0 57.9 58.0 27.9 0.0 0.116726 116388 117890 2453-2476 1.000000 79.8 ndhD_p2 ndhD 2 GTTGGGACCCAAAGGAAACT TGGCCCTCTCTCATAAACCA 20 20 50.0 50.0 57.9 58.0 27.9 0.0 0.116726 116388 117890 2452-2475 1.000000 79.8 ndhD_p3 ndhD 3 TTGTGGCGTCTATTGGCTTT TGGCCCTCTCTCATAAACCA 20 20 45.0 50.0 58.1 58.0 0.0 0.0 0.130299 116388 117890 2350-2373 1.000000 79.7 ndhD_p4 ndhD 4 AATTGTGGCGTCTATTGGCT TGGCCCTCTCTCATAAACCA 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.163356 116388 117890 2352-2375 1.000000 79.5 ndhD_p5 ndhD 5 ATTGTGGCGTCTATTGGCTT TGGCCCTCTCTCATAAACCA 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.163356 116388 117890 2351-2374 1.000000 79.5 ndhA_p1 ndhA 1 TGAACTCAGTTACCATAGGAAACA CCCACCGGGTTTTATCAACT 24 20 37.5 50.0 57.6 57.8 0.0 6.3 4.637773 120459 122642 2409-2423 1.000000 43.1 ndhA_p2 ndhA 2 TCATGAACTCAGTTACCATAGGA CCCACCGGGTTTTATCAACT 23 20 39.1 50.0 56.5 57.8 0.0 6.3 4.746193 120459 122642 2412-2426 1.000000 42.2 ndhA_p3 ndhA 3 TGTTTGAGACAAGTTGTGAA CCCACCGGGTTTTATCAACT 20 20 35.0 50.0 53.2 57.8 14.6 6.3 5.009506 120459 122642 2341-2355 1.000000 40.2 ndhA_p4 ndhA 4 TTGTTTGAGACAAGTTGTGA CCCACCGGGTTTTATCAACT 20 20 35.0 50.0 53.2 57.8 14.6 6.3 5.009506 120459 122642 2342-2356 1.000000 40.2 ndhA_p5 ndhA 5 TCATGAACTCAGTTACCATAGGAA CCCACCGGGTTTTATCAACT 24 20 37.5 50.0 57.1 57.8 0.0 6.3 5.077209 120459 122642 2412-2426 1.000000 40.2 ycf1_p1 ycf1 1 GCTATCTCTATTCGCGCGAT CAAATGTGCATTCCCCTCTT 20 20 50.0 45.0 57.8 56.3 35.2 0.0 1.908635 127796 127915 223-229 1.000000 68.6 ycf1_p2 ycf1 2 CTATTCGCGCGATCTCCTTT CAAATGTGCATTCCCCTCTT 20 20 50.0 45.0 58.2 56.3 35.2 0.0 1.955027 127796 127915 216-222 1.000000 68.4 ycf1_p3 ycf1 3 TATTCGCGCGATCTCCTTTC CAAATGTGCATTCCCCTCTT 20 20 50.0 45.0 58.2 56.3 35.2 0.0 1.959921 127796 127915 215-221 1.000000 68.3 ycf1_p4 ycf1 4 TCCCAGGTCTCTGCTATCTC CAAATGTGCATTCCCCTCTT 20 20 55.0 45.0 57.6 56.3 0.0 0.0 2.100544 127796 127915 235-241 1.000000 66.9 ycf1_p5 ycf1 5 CCCAGGTCTCTGCTATCTCT CAAATGTGCATTCCCCTCTT 20 20 55.0 45.0 57.6 56.3 0.0 0.0 2.107274 127796 127915 234-240 1.000000 66.8