primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 GTCTTTCAAGTCGCACGTTG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.081289 7021 7791 845-851 1.000000 80.6 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 ATGTCTTTCAAGTCGCACGT GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 0.0 16.9 0.210236 7021 7791 847-853 1.000000 79.5 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 GCACGTTGCTTTTTACCACA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 57.8 58.1 0.0 16.9 0.272396 7021 7791 833-839 1.000000 79.1 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 CATGTCTTTCAAGTCGCACG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.8 58.1 0.0 16.9 0.293454 7021 7791 848-854 1.000000 78.9 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 TGTCTTTCAAGTCGCACGTT GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.4 58.1 0.0 16.9 0.428755 7021 7791 846-852 1.000000 77.8 trnQ-UUG-psbK_p1 trnQ-UUG-psbK 1 GATATGCTCTGGGACGGAAG AGGCTTCAGGTAATTTCACGA 20 21 55.0 42.9 57.6 57.3 0.0 0.0 2.143074 7864 8597 901-902 1.000000 63.3 trnQ-UUG-psbK_p2 trnQ-UUG-psbK 2 GACCAAAACCCGTTGCCTTA AGGCTTCAGGTAATTTCACGA 20 21 50.0 42.9 58.7 57.3 0.0 0.0 2.375323 7864 8597 859-860 1.000000 61.5 trnQ-UUG-psbK_p3 trnQ-UUG-psbK 3 GATATGCTCTGGGACGGAAG AGGCTTCAGGTAATTTCACGAA 20 22 55.0 40.9 57.6 58.0 0.0 0.0 2.463116 7864 8597 901-902 1.000000 60.7 trnQ-UUG-psbK_p4 trnQ-UUG-psbK 4 AATGGATATGCTCTGGGACG AGGCTTCAGGTAATTTCACGA 20 21 50.0 42.9 57.2 57.3 0.0 0.0 2.543157 7864 8597 905-906 1.000000 60.1 trnQ-UUG-psbK_p5 trnQ-UUG-psbK 5 GAATAGCGGGACCAAAACCC AGGCTTCAGGTAATTTCACGA 20 21 55.0 42.9 58.9 57.3 0.0 0.0 2.595320 7864 8597 868-869 1.000000 59.7 trnS-GCU-trnG-GCC_p1 trnS-GCU-trnG-GCC 1 CAATCCGACGCTTTAGTCCA TGAATCAAACGAGGGATCCC 20 20 50.0 50.0 58.0 57.3 0.0 24.6 0.714678 9420 10611 1244-1311 1.000000 79.1 trnS-GCU-trnG-GCC_p2 trnS-GCU-trnG-GCC 2 AATCCGACGCTTTAGTCCAC TGAATCAAACGAGGGATCCC 20 20 50.0 50.0 58.0 57.3 0.0 24.6 0.716066 9420 10611 1243-1310 1.000000 79.1 trnS-GCU-trnG-GCC_p3 trnS-GCU-trnG-GCC 3 ACGGAAAGAGAGGGATTCGA TGAATCAAACGAGGGATCCC 20 20 50.0 50.0 58.2 57.3 0.0 24.6 0.861444 9420 10611 1298-1365 1.000000 77.7 trnS-GCU-trnG-GCC_p4 trnS-GCU-trnG-GCC 4 TGGAAACGGAAAGAGAGGGA TGAATCAAACGAGGGATCCC 20 20 50.0 50.0 58.3 57.3 0.0 24.6 0.985551 9420 10611 1303-1370 1.000000 76.7 trnS-GCU-trnG-GCC_p5 trnS-GCU-trnG-GCC 5 CAATCCGACGCTTTAGTCCA GGATCCATAGAACGAATCGCA 20 21 50.0 47.6 58.0 58.0 0.0 7.0 1.031212 9420 10611 1212-1279 1.000000 76.6 trnR-UCU-atpA_p1 trnR-UCU-atpA 1 GGTTCAAATCCTATTGGACGC AAGACATTCACTCGGGAAGC 21 20 47.6 50.0 57.3 57.9 0.0 0.0 1.793395 11803 12293 587-611 1.000000 69.1 trnR-UCU-atpA_p2 trnR-UCU-atpA 2 GGTTCAAATCCTATTGGACGC CCAAGACATTCACTCGGGAA 21 20 47.6 50.0 57.3 57.5 0.0 0.0 2.165486 11803 12293 589-613 1.000000 66.2 trnR-UCU-atpA_p3 trnR-UCU-atpA 3 TGGATAGGACAGAGGTCTTCT AAGACATTCACTCGGGAAGC 21 20 47.6 50.0 56.9 57.9 0.0 0.0 2.152209 11803 12293 622-646 1.000000 66.1 trnR-UCU-atpA_p4 trnR-UCU-atpA 4 GGTTCAAATCCTATTGGACGC ACCAAGACATTCACTCGGGA 21 20 47.6 50.0 57.3 58.7 0.0 0.0 2.344727 11803 12293 590-614 1.000000 64.7 trnR-UCU-atpA_p5 trnR-UCU-atpA 5 GTTCAAATCCTATTGGACGCA AAGACATTCACTCGGGAAGC 21 20 42.9 50.0 56.6 57.9 0.0 0.0 2.496339 11803 12293 586-610 1.000000 63.5 atpF-atpH_p1 atpF-atpH 1 ATTAAACCCGAAACTCCCGG TGGGCTGGTTGTAGCATTAG 20 20 50.0 50.0 57.9 57.6 0.0 0.0 0.536681 15172 15773 719-739 1.000000 76.3 atpF-atpH_p2 atpF-atpH 2 ATTAAACCCGAAACTCCCGG AGGCAGAGGGAAAAATACGG 20 20 50.0 50.0 57.9 57.6 0.0 0.0 0.538372 15172 15773 786-806 1.000000 76.2 atpF-atpH_p3 atpF-atpH 3 ATTAAACCCGAAACTCCCGG GCAGAGGGAAAAATACGGGG 20 20 50.0 55.0 57.9 58.6 0.0 0.0 0.728758 15172 15773 784-804 1.000000 74.7 atpF-atpH_p4 atpF-atpH 4 ATTAAACCCGAAACTCCCGG GGCAGAGGGAAAAATACGGG 20 20 50.0 55.0 57.9 58.6 0.0 0.0 0.728758 15172 15773 785-805 1.000000 74.7 atpF-atpH_p5 atpF-atpH 5 ATTAAACCCGAAACTCCCGG CCGAGGCAGAGGGAAAAATA 20 20 50.0 50.0 57.9 57.3 0.0 0.0 0.828409 15172 15773 789-809 1.000000 73.9 rpoB_p1 rpoB 1 TGGCATTTTCTTTTGACCCG AAAGCAAGGATATGGGCTCG 20 20 45.0 50.0 57.2 58.0 0.0 0.0 0.837567 29204 29323 175-176 1.000000 76.0 rpoB_p2 rpoB 2 GGCATTTTCTTTTGACCCGA AAAGCAAGGATATGGGCTCG 20 20 45.0 50.0 56.9 58.0 0.0 0.0 1.125785 29204 29323 174-175 1.000000 73.7 rpoB_p3 rpoB 3 ATGGCATTTTCTTTTGACCCG AAAGCAAGGATATGGGCTCG 21 20 42.9 50.0 57.7 58.0 0.0 0.0 1.344731 29204 29323 176-177 1.000000 72.0 rpoB_p4 rpoB 4 CGCCCACACAAGCAAATTG AAAGCAAGGATATGGGCTCG 19 20 52.6 50.0 58.5 58.0 0.0 0.0 1.507302 29204 29323 211-212 1.000000 70.2 rpoB_p5 rpoB 5 GGCATTTTCTTTTGACCCGAT AAAGCAAGGATATGGGCTCG 21 20 42.9 50.0 57.4 58.0 0.0 0.0 1.620026 29204 29323 174-175 1.000000 69.8 psaA-ycf3_p1 psaA-ycf3 1 CCCATTCCTCGAAAGACGTT AGCCCTTACCCCTGGTAATT 20 20 50.0 50.0 57.9 58.0 0.0 6.2 0.098894 47189 48030 943-988 1.000000 82.9 psaA-ycf3_p2 psaA-ycf3 2 CCCATTCCTCGAAAGACGTT AGCTATAGCCCTTACCCCTG 20 20 50.0 55.0 57.9 58.0 0.0 21.2 0.126257 47189 48030 949-994 1.000000 82.6 psaA-ycf3_p3 psaA-ycf3 3 AGAAATGACCGGGTTTAGCC AGCCCTTACCCCTGGTAATT 20 20 50.0 50.0 57.9 58.0 6.3 6.2 0.128409 47189 48030 961-1006 1.000000 82.6 psaA-ycf3_p4 psaA-ycf3 4 CCCATTCCTCGAAAGACGTT ATCAAGCCGCTGAGTATTGG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.135721 47189 48030 974-1019 1.000000 82.5 psaA-ycf3_p5 psaA-ycf3 5 AGAAATGACCGGGTTTAGCC AGCTATAGCCCTTACCCCTG 20 20 50.0 55.0 57.9 58.0 6.3 21.2 0.155772 47189 48030 967-1012 1.000000 82.3 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 51665 53038 1434-1456 1.000000 79.7 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 51665 53038 1442-1464 1.000000 79.2 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 AAATGCGACGCTCTAACCTC ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.4 58.0 22.1 0.0 0.363047 51665 53038 1406-1428 1.000000 78.8 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 AAATGCGACGCTCTAACCTC TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 58.4 58.1 22.1 0.0 0.427856 51665 53038 1414-1436 1.000000 78.3 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GGAATCGAACCGATGACCAT AGTCCGTAGCGTCTACCAAT 20 20 50.0 50.0 57.8 58.2 15.5 10.2 0.480302 51665 53038 1448-1470 1.000000 77.8 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TGGCCCTTTATTAATCGGGG AAAAGATGCACGTTGGGTCT 20 20 50.0 45.0 57.3 58.0 15.4 0.0 0.686887 56543 57625 1250-1302 1.000000 79.1 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TGGCCCTTTATTAATCGGGG AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 57.3 57.8 15.4 0.0 0.865427 56543 57625 1179-1231 1.000000 77.7 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 TGGCCCTTTATTAATCGGGG GATGCACGTTGGGTCTGTAA 20 20 50.0 50.0 57.3 58.2 15.4 0.0 0.864810 56543 57625 1246-1298 1.000000 77.6 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 TGGCCCTTTATTAATCGGGG ATGCACGTTGGGTCTGTAAA 20 20 50.0 45.0 57.3 57.7 15.4 0.0 0.932149 56543 57625 1245-1297 1.000000 77.1 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TGGCCCTTTATTAATCGGGG ACGTTGGGTCTGTAAAGCAA 20 20 50.0 45.0 57.3 57.7 15.4 0.0 1.003460 56543 57625 1241-1293 1.000000 76.5 atpB-rbcL_p1 atpB-rbcL 1 CCTGGGGGAAAAGCTACATC AACACCAGCTTTGAACCCAA 20 20 55.0 45.0 57.9 58.1 0.0 0.0 0.199291 60727 61516 952-955 1.000000 80.8 atpB-rbcL_p2 atpB-rbcL 2 CTGGGGGAAAAGCTACATCC AACACCAGCTTTGAACCCAA 20 20 55.0 45.0 57.9 58.1 4.2 0.0 0.199291 60727 61516 951-954 1.000000 80.8 atpB-rbcL_p3 atpB-rbcL 3 GGGGGAAAAGCTACATCCAG AACACCAGCTTTGAACCCAA 20 20 55.0 45.0 57.9 58.1 12.8 0.0 0.199291 60727 61516 949-952 1.000000 80.8 atpB-rbcL_p4 atpB-rbcL 4 AAGCTACATCCAGTACCGGA AACACCAGCTTTGAACCCAA 20 20 50.0 45.0 57.8 58.1 9.5 0.0 0.295265 60727 61516 942-945 1.000000 80.1 atpB-rbcL_p5 atpB-rbcL 5 ATTTGAGCGATACGTCCCAG AACACCAGCTTTGAACCCAA 20 20 50.0 45.0 57.8 58.1 0.0 0.0 0.365766 60727 61516 916-919 1.000000 79.6 accD-psaI_p1 accD-psaI 1 TTGATTCAATCGTACCGCGT CCATTGCAATTGCCGGAAAT 20 20 45.0 45.0 58.0 58.0 4.9 26.9 0.027955 65499 66113 773-798 1.000000 82.2 accD-psaI_p2 accD-psaI 2 TTGATTCAATCGTACCGCGT AAGAAGCCATTGCAATTGCC 20 20 45.0 45.0 58.0 57.9 4.9 26.8 0.104489 65499 66113 779-804 1.000000 81.6 accD-psaI_p3 accD-psaI 3 TCAATCGTACCGCGTAATCC CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 57.9 58.0 4.9 26.9 0.151015 65499 66113 768-793 1.000000 81.2 accD-psaI_p4 accD-psaI 4 CAATCGTACCGCGTAATCCT CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 57.9 58.0 4.9 26.9 0.156826 65499 66113 767-792 1.000000 81.2 accD-psaI_p5 accD-psaI 5 TCAATCGTACCGCGTAATCC AAGAAGCCATTGCAATTGCC 20 20 50.0 45.0 57.9 57.9 4.9 26.8 0.227548 65499 66113 774-799 1.000000 80.6 petA-psbJ_p1 petA-psbJ 1 GTCTCTTGTTCTTCGTGGCA ATTCCGGATTGGGTTCATCC 20 20 50.0 50.0 58.1 57.6 0.0 4.1 0.499107 69309 70648 1455-1485 1.000000 77.0 petA-psbJ_p2 petA-psbJ 2 CGTGTCCAAGGTCTCTTGTT ATTCCGGATTGGGTTCATCC 20 20 50.0 50.0 57.8 57.6 5.6 4.1 0.605466 69309 70648 1465-1495 1.000000 76.2 petA-psbJ_p3 petA-psbJ 3 TGTTCTTCGTGGCATCTGTT ATTCCGGATTGGGTTCATCC 20 20 45.0 50.0 57.7 57.6 0.0 4.1 0.619518 69309 70648 1449-1479 1.000000 76.1 petA-psbJ_p4 petA-psbJ 4 TTGTTCTTCGTGGCATCTGT ATTCCGGATTGGGTTCATCC 20 20 45.0 50.0 57.7 57.6 0.0 4.1 0.619518 69309 70648 1450-1480 1.000000 76.1 petA-psbJ_p5 petA-psbJ 5 CGTTACGTGTCCAAGGTCTC ATTCCGGATTGGGTTCATCC 20 20 55.0 50.0 58.3 57.6 0.0 4.1 0.670333 69309 70648 1470-1500 1.000000 75.7 rps3-rps19_p1 rps3-rps19 1 TACCAAGTCTGAAACCGAGC ATAAACTTCCGGGGACATGC 20 20 50.0 50.0 57.5 57.9 0.0 0.0 0.503392 91340 92112 836-863 1.000000 79.6 rps3-rps19_p2 rps3-rps19 2 GTCTGAAACCGAGCGGATTT ATAAACTTCCGGGGACATGC 20 20 50.0 50.0 58.6 57.9 16.8 0.0 0.613103 91340 92112 830-857 1.000000 78.8 rps3-rps19_p3 rps3-rps19 3 TGGTTGTGCAAACCAAAGAG ATAAACTTCCGGGGACATGC 20 20 45.0 50.0 57.0 57.9 22.9 0.0 1.010273 91340 92112 874-901 1.000000 75.4 rps3-rps19_p4 rps3-rps19 4 TCTGAAACCGAGCGGATTTA ATAAACTTCCGGGGACATGC 20 20 45.0 50.0 57.0 57.9 16.8 0.0 1.095356 91340 92112 829-856 1.000000 74.9 rps3-rps19_p5 rps3-rps19 5 GTCTGAAACCGAGCGGATT ATAAACTTCCGGGGACATGC 19 20 52.6 50.0 57.9 57.9 16.8 0.0 1.191811 91340 92112 830-857 1.000000 74.1 ndhF-rpl32_p1 ndhF-rpl32 1 CGGGAAAAAGGAGAAGTCCC TGCTACCCAATATGCCTTCT 20 20 55.0 45.0 58.2 56.3 0.0 0.0 1.901904 120595 121537 1117-1119 1.000000 65.4 ndhF-rpl32_p2 ndhF-rpl32 2 CGGGAAAAAGGAGAAGTCCC TCAATGCTACCCAATATGCCT 20 21 55.0 42.9 58.2 57.1 0.0 0.0 2.059596 120595 121537 1121-1123 1.000000 64.1 ndhF-rpl32_p3 ndhF-rpl32 3 CGGGAAAAAGGAGAAGTCCC TGCTACCCAATATGCCTTCTT 20 21 55.0 42.9 58.2 57.0 0.0 0.0 2.129057 120595 121537 1117-1119 1.000000 63.5 ndhF-rpl32_p4 ndhF-rpl32 4 CGGGAAAAAGGAGAAGTCCC GCTACCCAATATGCCTTCTTCT 20 22 55.0 45.5 58.2 57.9 0.0 0.0 2.269610 120595 121537 1116-1118 1.000000 62.4 ndhF-rpl32_p5 ndhF-rpl32 5 CGGGAAAAAGGAGAAGTCCC ACCCAATATGCCTTCTTCTTCC 20 22 55.0 45.5 58.2 58.1 0.0 0.0 2.274027 120595 121537 1113-1115 1.000000 62.4 ndhA_p1 ndhA 1 ACCCAGTTACCATAAGGAACA GTCCCCCGGGTTTTATCAAT 21 20 42.9 50.0 56.3 57.6 0.0 21.8 3.195769 127802 130333 2753-2770 1.000000 55.3 ndhA_p2 ndhA 2 AACCCAGTTACCATAAGGAACA GTCCCCCGGGTTTTATCAAT 22 20 40.9 50.0 57.0 57.6 0.0 21.8 3.452661 127802 130333 2754-2771 1.000000 53.3 ndhA_p3 ndhA 3 TGAACCCAGTTACCATAAGGA GTCCCCCGGGTTTTATCAAT 21 20 42.9 50.0 56.0 57.6 0.0 21.8 3.479818 127802 130333 2756-2773 1.000000 53.1 ndhA_p4 ndhA 4 GAACCCAGTTACCATAAGGAACA GTCCCCCGGGTTTTATCAAT 23 20 43.5 50.0 58.1 57.6 0.0 21.8 3.533624 127802 130333 2755-2772 1.000000 52.6 ndhA_p5 ndhA 5 TGAACCCAGTTACCATAAGGAAC GTCCCCCGGGTTTTATCAAT 23 20 43.5 50.0 58.1 57.6 0.0 21.8 3.533624 127802 130333 2756-2773 1.000000 52.6 ycf1_p1 ycf1 1 TACCATACTGAAACGGCTGC GCATTTTTGGGGTTCGATCG 20 20 50.0 50.0 58.0 58.1 0.0 9.4 0.110477 132823 132942 1237-1238 1.000000 81.8 ycf1_p2 ycf1 2 TACCATACTGAAACGGCTGC ACGAACAACATCGAAGCAGA 20 20 50.0 45.0 58.0 57.9 0.0 3.5 0.167457 132823 132942 780-780 1.000000 81.6 ycf1_p3 ycf1 3 ACTGAAACGGCTGCCATTAT GCATTTTTGGGGTTCGATCG 20 20 45.0 50.0 57.9 58.1 20.3 9.4 0.220705 132823 132942 1231-1232 1.000000 80.8 ycf1_p4 ycf1 4 ATACTGAAACGGCTGCCATT GCATTTTTGGGGTTCGATCG 20 20 45.0 50.0 57.9 58.1 20.3 9.4 0.220705 132823 132942 1233-1234 1.000000 80.8 ycf1_p5 ycf1 5 TACCATACTGAAACGGCTGC TGAACTGGCGTGATTGCTTA 20 20 50.0 45.0 58.0 57.8 0.0 0.0 0.195936 132823 132942 722-722 0.800000 70.5