primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps4_p1 rps4 1 AAAAATACGCCGTCTGGGT AAAACCTGACCTGTTGACCC 19 20 47.4 50.0 57.4 57.9 0.0 0.0 1.704549 61 180 246-246 1.000000 66.7 rps4_p2 rps4 2 AAAAATACGCCGTCTGGGT TTGACCCTTTGGCTTTTCCA 19 20 47.4 45.0 57.4 57.8 0.0 0.0 1.804091 61 180 233-233 1.000000 65.9 rps4_p3 rps4 3 AAAAATACGCCGTCTGGGT CCTGACCTGTTGACCCTTTG 19 20 47.4 55.0 57.4 58.4 0.0 0.0 2.027976 61 180 242-242 1.000000 64.1 rps4_p4 rps4 4 AAAAATACGCCGTCTGGGT CTGACCTGTTGACCCTTTGG 19 20 47.4 55.0 57.4 58.4 0.0 0.0 2.027976 61 180 241-241 1.000000 64.1 rps4_p5 rps4 5 AAAAATACGCCGTCTGGGT GTTGACCCTTTGGCTTTTCC 19 20 47.4 50.0 57.4 57.5 0.0 0.0 2.163487 61 180 234-234 1.000000 63.0 rps4-rps16_p1 rps4-rps16 1 GTAAGTGGGTCGGTTTGGAA ATTCCTTCAAGTCGCACGTT 20 20 50.0 45.0 57.7 58.1 0.0 0.0 0.380313 634 1185 674-676 1.000000 78.3 rps4-rps16_p2 rps4-rps16 2 GTAAGTGGGTCGGTTTGGAA AAGTCGCACGTTGCTTTCTA 20 20 50.0 45.0 57.7 58.1 0.0 8.1 0.398590 634 1185 666-668 1.000000 78.1 rps4-rps16_p3 rps4-rps16 3 AAGTGGGTCGGTTTGGAAAT ATTCCTTCAAGTCGCACGTT 20 20 45.0 45.0 57.6 58.1 0.0 0.0 0.496061 634 1185 672-674 1.000000 77.3 rps4-rps16_p4 rps4-rps16 4 AAGTGGGTCGGTTTGGAAAT AAGTCGCACGTTGCTTTCTA 20 20 45.0 45.0 57.6 58.1 0.0 8.1 0.514338 634 1185 664-666 1.000000 77.2 rps4-rps16_p5 rps4-rps16 5 AGTAAGTGGGTCGGTTTGGA ATTCCTTCAAGTCGCACGTT 20 20 50.0 45.0 58.6 58.1 0.0 0.0 0.694296 634 1185 675-677 1.000000 75.7 rps16-trnK-UUU_p1 rps16-trnK-UUU 1 GCTCAACCTACGGAAACTGT TCTACCAACGGTATGGACGA 20 20 50.0 50.0 57.8 57.9 0.0 10.6 0.292589 2337 2985 826-829 1.000000 78.2 rps16-trnK-UUU_p2 rps16-trnK-UUU 2 GCTCAACCTACGGAAACTGT AAAGCCGAGTACTCTACCGT 20 20 50.0 50.0 57.8 58.2 0.0 20.3 0.333738 2337 2985 761-764 1.000000 78.0 rps16-trnK-UUU_p3 rps16-trnK-UUU 3 GCTCAACCTACGGAAACTGT AAGCCGAGTACTCTACCGTT 20 20 50.0 50.0 57.8 58.2 0.0 20.3 0.333738 2337 2985 760-763 1.000000 78.0 rps16-trnK-UUU_p4 rps16-trnK-UUU 4 CCTTGAAAAAGGCGCTCAAC TCTACCAACGGTATGGACGA 20 20 50.0 50.0 58.2 57.9 7.6 10.6 0.356314 2337 2985 839-842 1.000000 77.7 rps16-trnK-UUU_p5 rps16-trnK-UUU 5 CTTGAAAAAGGCGCTCAACC TCTACCAACGGTATGGACGA 20 20 50.0 50.0 58.2 57.9 7.6 10.6 0.356314 2337 2985 838-841 1.000000 77.7 ndhJ-ndhK_p1 ndhJ-ndhK 1 GCCAATCCTCGGGCTTTATT CGCCATCTACTTCAGAGATCC 20 21 50.0 52.4 58.3 57.7 0.0 0.0 1.603911 11129 11263 324-324 1.000000 67.7 ndhJ-ndhK_p2 ndhJ-ndhK 2 CAAGCAGACAAACGACCTTG CGCCATCTACTTCAGAGATCC 20 21 50.0 52.4 57.6 57.7 0.0 0.0 1.686035 11129 11263 238-238 1.000000 67.2 ndhJ-ndhK_p3 ndhJ-ndhK 3 CCAAGCAGACAAACGACCTT CGCCATCTACTTCAGAGATCC 20 21 50.0 52.4 58.7 57.7 0.0 0.0 1.987324 11129 11263 239-239 1.000000 64.8 ndhJ-ndhK_p4 ndhJ-ndhK 4 GCCAATCCTCGGGCTTTATT GCCATCTACTTCAGAGATCCC 20 21 50.0 52.4 58.3 57.3 0.0 0.0 1.983880 11129 11263 323-323 1.000000 64.6 ndhJ-ndhK_p5 ndhJ-ndhK 5 CAAGCAGACAAACGACCTTG GCCATCTACTTCAGAGATCCC 20 21 50.0 52.4 57.6 57.3 0.0 0.0 2.066004 11129 11263 237-237 1.000000 64.1 atpH-atpI_p1 atpH-atpI 1 TCCAGGTCCAATAGAAGCCA ATAGGGGAATCCATGGAGGG 20 20 50.0 55.0 58.0 57.9 0.0 21.3 0.100384 17369 18483 1215-1220 1.000000 79.7 atpH-atpI_p2 atpH-atpI 2 AACGGAAGCAGCAGAAATCA ATAGGGGAATCCATGGAGGG 20 20 45.0 55.0 58.1 57.9 0.0 21.3 0.169579 17369 18483 1170-1175 1.000000 79.2 atpH-atpI_p3 atpH-atpI 3 GATACCTTCTACGGCTTGGC ATAGGGGAATCCATGGAGGG 20 20 55.0 55.0 58.1 57.9 0.0 21.3 0.198632 17369 18483 1257-1262 1.000000 78.9 atpH-atpI_p4 atpH-atpI 4 CGATACCTTCTACGGCTTGG ATAGGGGAATCCATGGAGGG 20 20 55.0 55.0 57.9 57.9 0.0 21.3 0.201463 17369 18483 1258-1263 1.000000 78.9 atpH-atpI_p5 atpH-atpI 5 AGCCAATCCAGCAGCAATAA ATAGGGGAATCCATGGAGGG 20 20 45.0 55.0 57.9 57.9 0.0 21.3 0.214244 17369 18483 1188-1193 1.000000 78.8 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 ATTCCCTCATTTCCATCCCG CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 57.3 58.1 0.0 0.0 0.746530 30746 31828 1159-1171 1.000000 75.1 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 GTTCTTCCGTCAATCCCTGA CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 57.2 58.1 0.0 0.0 0.844663 30746 31828 1236-1248 1.000000 74.2 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 AGTTCTTCCGTCAATCCCTG CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 57.2 58.1 0.0 0.0 0.852292 30746 31828 1237-1249 1.000000 74.1 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 ATTCCCTCATTTCCATCCCG GCAAAGGGTTTCGGGTTTTT 20 20 50.0 45.0 57.3 57.7 0.0 0.0 0.983538 30746 31828 1195-1207 1.000000 73.1 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 ATTCCCTCATTTCCATCCCG TTATTGATCAGGCGACACCC 20 20 50.0 50.0 57.3 57.7 0.0 0.0 0.989985 30746 31828 1177-1189 1.000000 73.1 petN-psbM_p1 petN-psbM 1 TCGGGGGCATAATTCACATG TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 58.0 57.6 0.0 0.0 1.427569 32436 33229 972-980 1.000000 70.0 petN-psbM_p2 petN-psbM 2 ATGGGGAAGAAGTGGACTCT TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 57.6 57.6 0.0 0.0 1.758286 32436 33229 887-895 1.000000 67.5 petN-psbM_p3 petN-psbM 3 AAGTCTTGCTTGGTCTGCTT TGCTACTGCACTGTTCATTCT 20 21 45.0 42.9 57.6 57.6 0.0 0.0 1.762433 32436 33229 944-952 1.000000 67.3 petN-psbM_p4 petN-psbM 4 AGTCTTGCTTGGTCTGCTTT TGCTACTGCACTGTTCATTCT 20 21 45.0 42.9 57.6 57.6 0.0 0.0 1.762433 32436 33229 943-951 1.000000 67.3 petN-psbM_p5 petN-psbM 5 GGGGGCATAATTCACATGGA TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 57.6 57.6 0.0 0.0 1.787488 32436 33229 970-978 1.000000 67.1 psaA-ycf3_p1 psaA-ycf3 1 GCCCATTCCTCGAAAGATGT ATCAAGCTGCCGAGTATTGG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.085081 46473 47214 920-920 1.000000 79.5 psaA-ycf3_p2 psaA-ycf3 2 GCCCATTCCTCGAAAGATGT CAGAGGCTTGGTTCGATCAA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.143264 46473 47214 935-935 1.000000 79.0 psaA-ycf3_p3 psaA-ycf3 3 GCCCATTCCTCGAAAGATGT CGATCAAGCTGCCGAGTATT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.186031 46473 47214 922-922 1.000000 78.7 psaA-ycf3_p4 psaA-ycf3 4 GCCCATTCCTCGAAAGATGT TTGGTTGAAGATCACGAGGC 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.235712 46473 47214 853-853 1.000000 78.3 psaA-ycf3_p5 psaA-ycf3 5 GAGAAATGACCTGGTCTGGC ATCAAGCTGCCGAGTATTGG 20 20 55.0 50.0 58.3 58.0 26.0 0.0 0.296963 46473 47214 938-938 1.000000 77.8 rbcL-accD_p1 rbcL-accD 1 GCTGCTTGTGAGGTATGGAA GGTCGAATACCCCCTAGTGA 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.191548 56646 57383 887-888 1.000000 78.6 rbcL-accD_p2 rbcL-accD 2 GCTGCTTGTGAGGTATGGAA ATCGAAGTGAACCGCCATTT 20 20 50.0 45.0 57.9 58.2 0.0 0.0 0.292644 56646 57383 824-825 1.000000 77.9 rbcL-accD_p3 rbcL-accD 3 GCTGCTTGTGAGGTATGGAA ATTTACTTAACCCGCACCCG 20 20 50.0 50.0 57.9 58.3 0.0 0.0 0.372332 56646 57383 868-869 1.000000 77.2 rbcL-accD_p4 rbcL-accD 4 GCTGCTTGTGAGGTATGGAA AGTGAACCGCCATTTTTCCA 20 20 50.0 45.0 57.9 58.3 0.0 0.0 0.415354 56646 57383 819-820 1.000000 76.9 rbcL-accD_p5 rbcL-accD 5 GCTGCTTGTGAGGTATGGAA CACCCGTGTTCTAACTCCTC 20 20 50.0 55.0 57.9 57.6 0.0 0.0 0.479268 56646 57383 854-855 1.000000 76.4 accD-psaI_p1 accD-psaI 1 TCAGCTTCACGGTTTCTGTC GCCATTGCAATTGCTGGAAA 20 20 50.0 45.0 58.1 58.2 0.0 32.1 0.323176 58827 59373 655-659 1.000000 77.8 accD-psaI_p2 accD-psaI 2 TTCAGCTTCACGGTTTCTGT GCCATTGCAATTGCTGGAAA 20 20 45.0 45.0 57.7 58.2 0.0 32.1 0.514624 58827 59373 656-660 1.000000 76.2 accD-psaI_p3 accD-psaI 3 GCTTCACGGTTTCTGTCCTT GCCATTGCAATTGCTGGAAA 20 20 50.0 45.0 58.4 58.2 0.0 32.1 0.594711 58827 59373 652-656 1.000000 75.6 accD-psaI_p4 accD-psaI 4 TCAGCTTCACGGTTTCTGTC GAAGCCATTGCAATTGCTGG 20 20 50.0 50.0 58.1 58.6 0.0 31.8 0.768436 58827 59373 658-662 1.000000 74.2 accD-psaI_p5 accD-psaI 5 TCAGCTTCACGGTTTCTGTC GGAAGCCATTGCAATTGCTG 20 20 50.0 50.0 58.1 58.6 0.0 31.8 0.768436 58827 59373 659-663 1.000000 74.2 psbE-petL_p1 psbE-petL 1 CAACCCGCAATGAATAGGGA CCGCCAGTAGAAAACCGAAA 20 20 50.0 50.0 57.9 58.5 6.4 0.0 0.536253 64138 65477 1484-1497 1.000000 76.5 psbE-petL_p2 psbE-petL 2 ACGAATAACCAACCCGCAAT CCGCCAGTAGAAAACCGAAA 20 20 45.0 50.0 58.2 58.5 0.0 0.0 0.655939 64138 65477 1493-1506 1.000000 75.5 psbE-petL_p3 psbE-petL 3 TGCTGACGAATAACCAACCC CCGCCAGTAGAAAACCGAAA 20 20 50.0 50.0 58.2 58.5 0.0 0.0 0.668844 64138 65477 1498-1511 1.000000 75.4 psbE-petL_p4 psbE-petL 4 CGAATAACCAACCCGCAATG CCGCCAGTAGAAAACCGAAA 20 20 50.0 50.0 57.8 58.5 0.0 0.0 0.672270 64138 65477 1492-1505 1.000000 75.4 psbE-petL_p5 psbE-petL 5 ACCAACCCGCAATGAATAGG CCGCCAGTAGAAAACCGAAA 20 20 50.0 50.0 58.2 58.5 0.0 0.0 0.722211 64138 65477 1486-1499 1.000000 75.0 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 TCAAGTGTATTGGGCAGGAA AGCGTGTCTACCGATTTCAC 20 20 45.0 50.0 56.7 58.0 0.0 0.0 1.272074 113744 114664 973-973 1.000000 70.2 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 TCAAGTGTATTGGGCAGGAA CAGCGTGTCTACCGATTTCA 20 20 45.0 50.0 56.7 58.0 0.0 0.0 1.273445 113744 114664 974-974 1.000000 70.2 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 TCAAGTGTATTGGGCAGGAA TCCTAAGAGCAGCGTGTCTA 20 20 45.0 50.0 56.7 57.9 0.0 0.0 1.388521 113744 114664 983-983 1.000000 69.3 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 TCAAGTGTATTGGGCAGGAA CCTAAGAGCAGCGTGTCTAC 20 20 45.0 55.0 56.7 57.8 0.0 0.0 1.460539 113744 114664 982-982 1.000000 68.7 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 TCAAGTGTATTGGGCAGGAA CTAAGAGCAGCGTGTCTACC 20 20 45.0 55.0 56.7 57.8 0.0 0.0 1.460539 113744 114664 981-981 1.000000 68.7 ccsA_p1 ccsA 1 TCAGATCTCCATTCCATTCTTGG TCAAAAACTCGTACAAACTTTCGT 23 24 43.5 33.3 58.0 57.8 0.0 0.0 7.213176 114860 115825 1098-1100 1.000000 40.1 ccsA_p2 ccsA 2 TCAGATCTCCATTCCATTCTTGG CAAAAACTCGTACAAACTTTCGT 23 23 43.5 34.8 58.0 56.5 0.0 0.0 7.522457 114860 115825 1097-1099 1.000000 40.1 ccsA_p3 ccsA 3 TCAGATCTCCATTCCATTCTTGG AAACTCGTACAAACTTTCGT 23 20 43.5 35.0 58.0 53.5 0.0 0.0 7.594844 114860 115825 1094-1096 1.000000 40.1 ccsA_p4 ccsA 4 TCAGATCTCCATTCCATTCTTGG AACTCGTACAAACTTTCGTT 23 20 43.5 35.0 58.0 53.5 0.0 0.0 7.594844 114860 115825 1093-1095 1.000000 40.1 ccsA_p5 ccsA 5 CAGATCTCCATTCCATTCTTGG TCAAAAACTCGTACAAACTTTCGT 22 24 45.5 33.3 56.6 57.8 0.0 0.0 7.617976 114860 115825 1097-1099 1.000000 40.1 ccsA-ndhD_p1 ccsA-ndhD 1 GGGCTGCATAGTTATGGTTCA TCCGGATTTCGTTCTCTCAC 21 20 47.6 50.0 58.1 57.4 0.5 0.0 1.718381 115826 116065 352-354 1.000000 67.8 ccsA-ndhD_p2 ccsA-ndhD 2 GGGCTGCATAGTTATGGTTCA CCGGATTTCGTTCTCTCACT 21 20 47.6 50.0 58.1 57.3 0.5 0.0 1.725610 115826 116065 351-353 1.000000 67.8 ccsA-ndhD_p3 ccsA-ndhD 3 AGGGCTGCATAGTTATGGTTC TCCGGATTTCGTTCTCTCAC 21 20 47.6 50.0 57.8 57.4 0.5 0.0 1.864027 115826 116065 353-355 1.000000 66.7 ccsA-ndhD_p4 ccsA-ndhD 4 AGGGCTGCATAGTTATGGTTC CCGGATTTCGTTCTCTCACT 21 20 47.6 50.0 57.8 57.3 0.5 0.0 1.871256 115826 116065 352-354 1.000000 66.6 ccsA-ndhD_p5 ccsA-ndhD 5 AGGGCTGCATAGTTATGGTT TCCGGATTTCGTTCTCTCAC 20 20 45.0 50.0 56.6 57.4 0.5 0.0 2.077555 115826 116065 353-355 1.000000 65.0 ndhE_p1 ndhE 1 TCTGCTCATGAAAGAAGGCC TCGAGATTGATGAGGAGTTGT 20 21 50.0 42.9 57.9 56.5 0.0 0.0 2.646141 118220 118525 447-448 1.000000 59.0 ndhE_p2 ndhE 2 CTGCTCATGAAAGAAGGCCA TCGAGATTGATGAGGAGTTGT 20 21 50.0 42.9 58.2 56.5 5.0 0.0 2.696061 118220 118525 446-447 1.000000 58.6 ndhE_p3 ndhE 3 TGCTCATGAAAGAAGGCCAA TCGAGATTGATGAGGAGTTGT 20 21 45.0 42.9 57.7 56.5 5.0 0.0 2.817549 118220 118525 445-446 1.000000 57.6 ndhE_p4 ndhE 4 TCTGCTCATGAAAGAAGGCC TCGAGATTGATGAGGAGTTGTT 20 22 50.0 40.9 57.9 57.2 0.0 0.0 2.928216 118220 118525 447-448 1.000000 56.8 ndhE_p5 ndhE 5 CTGCTCATGAAAGAAGGCCA TCGAGATTGATGAGGAGTTGTT 20 22 50.0 40.9 58.2 57.2 5.0 0.0 2.978136 118220 118525 446-447 1.000000 56.4 ndhE-ndhG_p1 ndhE-ndhG 1 AAGACACATAAGCGCTCGAA TGCTATGGCTCGTCAGTACT 20 20 45.0 50.0 57.6 58.2 12.1 1.7 0.599820 118526 118813 399-412 1.000000 78.6 ndhE-ndhG_p2 ndhE-ndhG 2 AGACACATAAGCGCTCGAAC TGCTATGGCTCGTCAGTACT 20 20 50.0 50.0 58.4 58.2 12.1 1.7 0.605884 118526 118813 398-411 1.000000 78.5 ndhE-ndhG_p3 ndhE-ndhG 3 CAAGACACATAAGCGCTCGA TGCTATGGCTCGTCAGTACT 20 20 50.0 50.0 58.4 58.2 12.1 1.7 0.607019 118526 118813 400-413 1.000000 78.5 ndhE-ndhG_p4 ndhE-ndhG 4 TCAAGACACATAAGCGCTCG TGCTATGGCTCGTCAGTACT 20 20 50.0 50.0 58.4 58.2 12.1 1.7 0.607019 118526 118813 401-414 1.000000 78.5 ndhE-ndhG_p5 ndhE-ndhG 5 GCTCAAGACACATAAGCGCT TGCTATGGCTCGTCAGTACT 20 20 50.0 50.0 58.6 58.2 2.6 1.7 0.872288 118526 118813 403-416 1.000000 76.3 ndhA_p1 ndhA 1 ATGAATCCGGTTACCATGGG TGGGAGAAGTTGATCGTTGA 20 20 50.0 45.0 57.3 56.5 18.1 0.0 2.169552 120443 122540 2218-2218 1.000000 63.0 ndhA_p2 ndhA 2 AATCCGGTTACCATGGGGAA TGGGAGAAGTTGATCGTTGA 20 20 50.0 45.0 58.7 56.5 18.1 0.0 2.211677 120443 122540 2215-2215 1.000000 62.7 ndhA_p3 ndhA 3 ATGAATCCGGTTACCATGGG TGGGAGAAGTTGATCGTTGAA 20 21 50.0 42.9 57.3 57.2 18.1 0.0 2.419354 120443 122540 2218-2218 1.000000 61.0 ndhA_p4 ndhA 4 AATCCGGTTACCATGGGGAA TGGGAGAAGTTGATCGTTGAA 20 21 50.0 42.9 58.7 57.2 18.1 0.0 2.461480 120443 122540 2215-2215 1.000000 60.7 ndhA_p5 ndhA 5 CGGTTACCATGGGGAACATA TGGGAGAAGTTGATCGTTGA 20 20 50.0 45.0 57.0 56.5 25.0 0.0 2.525461 120443 122540 2211-2211 1.000000 60.2 ycf1_p1 ycf1 1 TGAAATATTCCGTGTGTTCCA ACGGATAATTCCAATGATGAAACA 21 24 38.1 33.3 55.5 57.0 0.0 0.0 8.500659 126509 126658 296-296 1.000000 41.1 ycf1_p2 ycf1 2 TGAAATATTCCGTGTGTTCCAA ACGGATAATTCCAATGATGAAACA 22 24 36.4 33.3 56.3 57.0 0.0 0.0 8.741136 126509 126658 296-296 1.000000 41.1 ycf1_p3 ycf1 3 TGAAATATTCCGTGTGTTCCA AACGGATAATTCCAATGATGAAACA 21 25 38.1 32.0 55.5 57.6 0.0 0.0 8.885860 126509 126658 297-297 1.000000 41.1 ycf1_p4 ycf1 4 TGAAATATTCCGTGTGTTCCA ACGGATAATTCCAATGATGAAACAA 21 25 38.1 32.0 55.5 57.6 0.0 0.0 8.885860 126509 126658 296-296 1.000000 41.1 ycf1_p5 ycf1 5 ATGAAATATTCCGTGTGTTCCA ACGGATAATTCCAATGATGAAACA 22 24 36.4 33.3 56.1 57.0 0.0 0.0 8.953148 126509 126658 297-297 1.000000 41.1