primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 CGAATCCCTTGCTTCATCCA GCTCAACCTACAGAAACCGT 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.208005 4299 4905 752-789 1.000000 79.8 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 ACGAATCCCTTGCTTCATCC GCTCAACCTACAGAAACCGT 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.209441 4299 4905 753-790 1.000000 79.8 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 AAAGCCGAGTACTCTACCGT GCTCAACCTACAGAAACCGT 20 20 50.0 50.0 58.2 57.8 20.3 0.0 0.333738 4299 4905 704-741 1.000000 78.9 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 AAGCCGAGTACTCTACCGTT GCTCAACCTACAGAAACCGT 20 20 50.0 50.0 58.2 57.8 20.3 0.0 0.333738 4299 4905 703-740 1.000000 78.9 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 CGAATCCCTTGCTTCATCCA AAGAGGGCGGGAATTTTGAA 20 20 50.0 45.0 58.0 57.7 0.0 0.0 0.345273 4299 4905 719-756 1.000000 78.8 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 CCACAACGGATCATGTCCTT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.9 58.1 11.1 16.9 0.189961 6056 6852 884-891 1.000000 81.5 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 CGTCGAGTTAAGAGCATCCC GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.2 58.1 0.0 16.9 0.234651 6056 6852 931-938 1.000000 81.0 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 GCACGTTGCTTTTTACCACA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 57.8 58.1 0.0 16.9 0.272396 6056 6852 858-865 1.000000 81.0 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 TCATGTCCTTCAAGTCGCAC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 0.0 16.9 0.280333 6056 6852 874-881 1.000000 80.9 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 CCACAACGGATCATGTCCTT TAAGGCATCGGGTTTTGGTC 20 20 50.0 50.0 57.9 58.2 11.1 0.0 0.284881 6056 6852 914-921 1.000000 80.7 atpH-atpI_p1 atpH-atpI 1 AACAGAAGCGGCAGAAATCA TTTGCAACTTTAGCTGCAGC 20 20 45.0 45.0 58.1 57.9 1.4 31.5 0.242376 13638 14318 763-765 1.000000 79.1 atpH-atpI_p2 atpH-atpI 2 TACCTTGACCAACTCCAGGT TTTGCAACTTTAGCTGCAGC 20 20 50.0 45.0 57.9 57.9 0.0 31.5 0.250875 13638 14318 821-823 1.000000 79.0 atpH-atpI_p3 atpH-atpI 3 AACAGAAGCGGCAGAAATCA CGAATCCATGGAGGGTCATC 20 20 45.0 55.0 58.1 57.8 1.4 21.3 0.279658 13638 14318 734-736 1.000000 78.9 atpH-atpI_p4 atpH-atpI 4 AGCCAATCCAGCAGCAATAA TTTGCAACTTTAGCTGCAGC 20 20 45.0 45.0 57.9 57.9 0.0 31.5 0.287042 13638 14318 781-783 1.000000 78.7 atpH-atpI_p5 atpH-atpI 5 TACCTTGACCAACTCCAGGT CGAATCCATGGAGGGTCATC 20 20 50.0 55.0 57.9 57.8 0.0 21.3 0.288157 13638 14318 792-794 1.000000 78.7 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 GCTGCCTCCTTGAAAGAGAG GAACCGATGACTTACGCCTT 20 20 55.0 50.0 58.3 58.0 0.0 0.0 0.269359 31480 32035 659-660 1.000000 78.8 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 TGTCCTGAACCACTAGACGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.287509 31480 32035 638-639 1.000000 78.7 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 GCTGCCTCCTTGAAAGAGAG CCGATGACTTACGCCTTACC 20 20 55.0 55.0 58.3 58.2 0.0 0.0 0.414292 31480 32035 656-657 1.000000 77.7 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 TGTCCTGAACCACTAGACGA CCGATGACTTACGCCTTACC 20 20 50.0 55.0 57.7 58.2 0.0 0.0 0.432442 31480 32035 635-636 1.000000 77.5 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 GCTGCCTCCTTGAAAGAGAG TTGAACCGATGACTTACGCC 20 20 55.0 50.0 58.3 58.3 0.0 0.0 0.546195 31480 32035 661-662 1.000000 76.6 psaA-ycf3_p1 psaA-ycf3 1 GGGGCCCTTAGCTATTGTTC ATCAAGCCGCTGAGTATTGG 20 20 55.0 50.0 58.0 58.0 24.4 0.0 0.058298 42477 43296 1028-1038 1.000000 82.5 psaA-ycf3_p2 psaA-ycf3 2 GGGGCCCTTAGCTATTGTTC ATTGGTTGAAGATCACGGGG 20 20 55.0 50.0 58.0 57.9 24.4 0.0 0.146110 42477 43296 962-972 1.000000 82.0 psaA-ycf3_p3 psaA-ycf3 3 GGGGCCCTTAGCTATTGTTC CGATCAAGCCGCTGAGTATT 20 20 55.0 50.0 58.0 58.1 24.4 0.0 0.159248 42477 43296 1030-1040 1.000000 81.7 psaA-ycf3_p4 psaA-ycf3 4 AAAAATGACCGGGTCTAGCC ATCAAGCCGCTGAGTATTGG 20 20 50.0 50.0 57.9 58.0 26.4 0.0 0.165236 42477 43296 1005-1015 1.000000 81.7 psaA-ycf3_p5 psaA-ycf3 5 AAAAATGACCGGGTCTAGCC ATTGGTTGAAGATCACGGGG 20 20 50.0 50.0 57.9 57.9 26.4 0.0 0.253048 42477 43296 939-949 1.000000 81.2 trnL-UAA-trnF-GAA_p1 trnL-UAA-trnF-GAA 1 AATCGTGAGGGTTCAAGTCC TCTACCAGCTGAGCTATCCC 20 20 50.0 55.0 57.5 58.0 0.0 17.4 0.476915 48950 49284 389-390 1.000000 76.8 trnL-UAA-trnF-GAA_p2 trnL-UAA-trnF-GAA 2 AATCGTGAGGGTTCAAGTCC TTTGAACTGGTGACACGAGG 20 20 50.0 50.0 57.5 58.1 0.0 20.1 0.526305 48950 49284 425-426 1.000000 76.4 trnL-UAA-trnF-GAA_p3 trnL-UAA-trnF-GAA 3 AATCGTGAGGGTTCAAGTCC GTGCCAGGAACCAGATTTGA 20 20 50.0 50.0 57.5 58.1 0.0 0.0 0.564710 48950 49284 440-441 1.000000 76.0 trnL-UAA-trnF-GAA_p4 trnL-UAA-trnF-GAA 4 AATCGTGAGGGTTCAAGTCC TCAGTCCTCTGCTCTACCAG 20 20 50.0 55.0 57.5 57.9 0.0 0.0 0.610708 48950 49284 401-402 1.000000 75.7 trnL-UAA-trnF-GAA_p5 trnL-UAA-trnF-GAA 5 AATCGTGAGGGTTCAAGTCC TGTGCCAGGAACCAGATTTG 20 20 50.0 50.0 57.5 58.4 0.0 0.0 0.854756 48950 49284 441-442 1.000000 73.7 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 GGGATAGCTCAGCTGGTAGA CCCGAAAGTTGGGTAGGATG 20 20 55.0 55.0 58.0 58.0 10.3 0.0 0.040892 49358 49993 784-815 1.000000 82.5 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 GGGATAGCTCAGCTGGTAGA CCGAAAGTTGGGTAGGATGG 20 20 55.0 55.0 58.0 58.0 10.3 0.0 0.040892 49358 49993 783-814 1.000000 82.5 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 CCTCGTGTCACCAGTTCAAA CCCGAAAGTTGGGTAGGATG 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.090283 49358 49993 748-779 1.000000 82.2 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 CCTCGTGTCACCAGTTCAAA CCGAAAGTTGGGTAGGATGG 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.090283 49358 49993 747-778 1.000000 82.2 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 AAAGGGGAATGGTCGGGATA CCGAAAGTTGGGTAGGATGG 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.136739 49358 49993 797-828 1.000000 81.7 rps18-rpl20_p1 rps18-rpl20 1 CGAGTCGACTACTAGAACTGC GAAAGAATCCCCCGAAACGA 21 20 52.4 50.0 57.7 57.9 20.1 0.0 1.410876 69561 69842 321-359 1.000000 73.9 rps18-rpl20_p2 rps18-rpl20 2 CGAGTCGACTACTAGAACTGC AAAGAATCCCCCGAAACGAT 21 20 52.4 45.0 57.7 57.2 20.1 0.0 2.108416 69561 69842 320-358 1.000000 68.3 rps18-rpl20_p3 rps18-rpl20 3 CGAGTCGACTACTAGAACTGC AAGAATCCCCCGAAACGATT 21 20 52.4 45.0 57.7 57.2 20.1 0.0 2.108416 69561 69842 319-357 1.000000 68.3 rps18-rpl20_p4 rps18-rpl20 4 CGAGTCGACTACTAGAACTGC AGAATCCCCCGAAACGATTT 21 20 52.4 45.0 57.7 57.2 20.1 0.0 2.108416 69561 69842 318-356 1.000000 68.3 rps18-rpl20_p5 rps18-rpl20 5 CGAGTCGACTACTAGAACTGC GGAAAGAATCCCCCGAAACG 21 20 52.4 55.0 57.7 58.9 20.1 0.0 2.214991 69561 69842 322-360 1.000000 67.5 rpl20-rps12_p1 rpl20-rps12 1 CCCTCGAAAGCTTGATCCAA CGCCGAGGAACATGTACTAG 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.234977 70230 71007 879-883 1.000000 79.5 rpl20-rps12_p2 rpl20-rps12 2 CTTGAATGAGCCCCTCGAAA CGCCGAGGAACATGTACTAG 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.234977 70230 71007 890-894 1.000000 79.5 rpl20-rps12_p3 rpl20-rps12 3 TTGAATGAGCCCCTCGAAAG CGCCGAGGAACATGTACTAG 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.234977 70230 71007 889-893 1.000000 79.5 rpl20-rps12_p4 rpl20-rps12 4 CCCTCGAAAGCTTGATCCAA GCCGAGGAACATGTACTAGG 20 20 50.0 55.0 57.9 57.5 0.0 19.0 0.624628 70230 71007 878-882 1.000000 76.4 rpl20-rps12_p5 rpl20-rps12 5 TTGAATGAGCCCCTCGAAAG GCCGAGGAACATGTACTAGG 20 20 50.0 55.0 57.9 57.5 0.0 19.0 0.624628 70230 71007 888-892 1.000000 76.4 psbT-psbN_p1 psbT-psbN 1 TCGAATCTATGGAAGCATTGGT ATCCTTTCGAAGAACACGGG 22 20 40.9 50.0 57.6 57.9 0.0 0.0 2.516835 75648 75707 202-202 1.000000 61.4 psbT-psbN_p2 psbT-psbN 2 TCGAATCTATGGAAGCATTGGT GCAGCCCTCTCAACAACTAA 22 20 40.9 50.0 57.6 57.8 0.0 0.0 2.607077 75648 75707 225-225 1.000000 60.6 psbT-psbN_p3 psbT-psbN 3 TCGAATCTATGGAAGCATTGGT TTCGAAGAACACGGGGACTA 22 20 40.9 50.0 57.6 58.4 0.0 0.0 2.802418 75648 75707 197-197 1.000000 59.2 psbT-psbN_p4 psbT-psbN 4 CGAATCTATGGAAGCATTGGT ATCCTTTCGAAGAACACGGG 21 20 42.9 50.0 56.1 57.9 0.0 0.0 2.992343 75648 75707 201-201 1.000000 57.7 psbT-psbN_p5 psbT-psbN 5 CGAATCTATGGAAGCATTGGT GCAGCCCTCTCAACAACTAA 21 20 42.9 50.0 56.1 57.8 0.0 0.0 3.082585 75648 75707 224-224 1.000000 56.8 petD_p1 petD 1 ACATAACACCACTAGTTGAAGGT TTCCCTAGATACGCATGTCG 23 20 39.1 50.0 57.4 56.9 0.1 7.8 4.642122 77913 79164 1319-1342 1.000000 45.2 petD_p2 petD 2 ACATAACACCACTAGTTGAAGGT GCGACTATTCCCTAGATACGC 23 21 39.1 52.4 57.4 57.9 0.1 0.0 4.696319 77913 79164 1326-1349 1.000000 44.8 petD_p3 petD 3 ACATAACACCACTAGTTGAAGGT CGCATGTCGTGTTATTTCACA 23 21 39.1 42.9 57.4 57.6 0.1 0.0 5.010050 77913 79164 1308-1331 1.000000 42.4 petD_p4 petD 4 CACTAGTTGAAGGTAATTCTCCGA TTCCCTAGATACGCATGTCG 24 20 41.7 50.0 58.0 56.9 0.0 7.8 5.117391 77913 79164 1310-1333 1.000000 42.4 petD_p5 petD 5 ACCACTAGTTGAAGGTAATTCTCC TTCCCTAGATACGCATGTCG 24 20 41.7 50.0 57.9 56.9 0.1 7.8 5.131003 77913 79164 1312-1335 1.000000 42.4 rrn4.5-rrn5_p1 rrn4.5-rrn5 1 CAGCTGAGGCATCCTAACAG AGTATCGTCACCGCAGTAGA 20 20 55.0 50.0 58.0 58.0 8.4 0.0 0.083276 107368 107643 385-393 1.000000 83.7 rrn4.5-rrn5_p2 rrn4.5-rrn5 2 CAGCTGAGGCATCCTAACAG TATCGTCACCGCAGTAGAGT 20 20 55.0 50.0 58.0 58.0 8.4 0.0 0.083276 107368 107643 383-391 1.000000 83.7 rrn4.5-rrn5_p3 rrn4.5-rrn5 3 GCTGAGGCATCCTAACAGAC TATCGTCACCGCAGTAGAGT 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.087359 107368 107643 381-389 1.000000 83.7 rrn4.5-rrn5_p4 rrn4.5-rrn5 4 GTCAAGTGGAAGTGCAGTGA AGTATCGTCACCGCAGTAGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.080545 107368 107643 411-419 1.000000 83.4 rrn4.5-rrn5_p5 rrn4.5-rrn5 5 GTCAAGTGGAAGTGCAGTGA TATCGTCACCGCAGTAGAGT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.080545 107368 107643 409-417 1.000000 83.4 ndhF-rpl32_p1 ndhF-rpl32 1 TGTTGCTGTCGGAAAAAGGA ACGCTTTTTAGAAAGAGAAGTACG 20 24 45.0 37.5 58.0 57.6 0.0 14.9 4.495010 112732 113621 1006-1031 1.000000 48.4 ndhF-rpl32_p2 ndhF-rpl32 2 TGTTGCTGTCGGAAAAAGGA CGCTTTTTAGAAAGAGAAGTACGT 20 24 45.0 37.5 58.0 57.6 0.0 9.8 4.495010 112732 113621 1005-1030 1.000000 48.4 ndhF-rpl32_p3 ndhF-rpl32 3 CGGAAAAAGGAGAAGTCCCA ACGCTTTTTAGAAAGAGAAGTACG 20 24 50.0 37.5 57.4 57.6 0.0 14.9 5.010927 112732 113621 997-1022 1.000000 44.4 ndhF-rpl32_p4 ndhF-rpl32 4 CGGAAAAAGGAGAAGTCCCA CGCTTTTTAGAAAGAGAAGTACGT 20 24 50.0 37.5 57.4 57.6 0.0 9.8 5.010927 112732 113621 996-1021 1.000000 44.4 ndhF-rpl32_p5 ndhF-rpl32 5 TGTTGCTGTCGGAAAAAGGA CGCTTTTTAGAAAGAGAAGTACG 20 23 45.0 39.1 58.0 56.0 0.0 9.8 5.048873 112732 113621 1005-1030 1.000000 44.4 trnL-UAG-ccsA_p1 trnL-UAG-ccsA 1 CTCTTAGGAAGCAGTGCGAG CGGAAACCGTTGAAAAGGAA 20 20 55.0 45.0 58.1 56.9 10.0 1.8 1.219452 114708 114838 231-239 1.000000 74.7 trnL-UAG-ccsA_p2 trnL-UAG-ccsA 2 CTTAGGAAGCAGTGCGAGAG CGGAAACCGTTGAAAAGGAA 20 20 55.0 45.0 58.1 56.9 10.0 1.8 1.219452 114708 114838 229-237 1.000000 74.7 trnL-UAG-ccsA_p3 trnL-UAG-ccsA 3 AAACAAGCCGCTATGGTGAA CGGAAACCGTTGAAAAGGAA 20 20 45.0 45.0 58.1 56.9 0.0 1.8 1.235083 114708 114838 267-275 1.000000 74.0 trnL-UAG-ccsA_p4 trnL-UAG-ccsA 4 AACAAGCCGCTATGGTGAAA CGGAAACCGTTGAAAAGGAA 20 20 45.0 45.0 58.1 56.9 0.0 1.8 1.235083 114708 114838 266-274 1.000000 74.0 trnL-UAG-ccsA_p5 trnL-UAG-ccsA 5 TTCAAACAAGCCGCTATGGT CGGAAACCGTTGAAAAGGAA 20 20 45.0 45.0 58.1 56.9 0.0 1.8 1.235083 114708 114838 270-278 1.000000 73.9 ndhE-ndhG_p1 ndhE-ndhG 1 TTTCGGCTCGTGACTAATCC TTGCTGTGGCTCGTCAATAA 20 20 50.0 45.0 57.7 57.8 0.0 0.0 0.466355 118583 118824 326-339 1.000000 81.8 ndhE-ndhG_p2 ndhE-ndhG 2 TTTCGGCTCGTGACTAATCC ATTGCTGTGGCTCGTCAATA 20 20 50.0 45.0 57.7 57.6 0.0 4.9 0.690544 118583 118824 327-340 1.000000 80.0 ndhE-ndhG_p3 ndhE-ndhG 3 TTTCGGCTCGTGACTAATCC AATTGCTGTGGCTCGTCAAT 20 20 50.0 45.0 57.7 58.5 0.0 0.0 0.750913 118583 118824 328-341 1.000000 79.5 ndhE-ndhG_p4 ndhE-ndhG 4 TCGGCTCGTGACTAATCCAT TTGCTGTGGCTCGTCAATAA 20 20 50.0 45.0 58.6 57.8 0.0 0.0 0.777680 118583 118824 324-337 1.000000 79.3 ndhE-ndhG_p5 ndhE-ndhG 5 CAAGACACATAAGAGCCCGA TTGCTGTGGCTCGTCAATAA 20 20 50.0 45.0 57.3 57.8 0.0 0.0 0.850355 118583 118824 352-365 1.000000 78.3 ycf1_p1 ycf1 1 TCGATATGGGACGGCTTAGT TGAATCATCCATTCAAGCCCA 20 21 50.0 42.9 58.0 57.6 0.0 0.0 1.394193 126218 126337 1448-1451 1.000000 70.3 ycf1_p2 ycf1 2 GATAGGGATCCTCCACCACA TGAATCATCCATTCAAGCCCA 20 21 55.0 42.9 57.9 57.6 12.6 0.0 1.488467 126218 126337 1138-1141 1.000000 69.7 ycf1_p3 ycf1 3 GTGATAGGGATCCTCCACCA TGAATCATCCATTCAAGCCCA 20 21 55.0 42.9 57.9 57.6 12.6 0.0 1.488467 126218 126337 1140-1143 1.000000 69.7 ycf1_p4 ycf1 4 TGATAGGGATCCTCCACCAC TGAATCATCCATTCAAGCCCA 20 21 55.0 42.9 57.9 57.6 12.6 0.0 1.488467 126218 126337 1139-1142 1.000000 69.7 ycf1_p5 ycf1 5 CAGATTCGATATGGGACGGC TGAATCATCCATTCAAGCCCA 20 21 55.0 42.9 58.3 57.6 0.0 0.0 1.670520 126218 126337 1453-1456 1.000000 68.1 rrn5-rrn4.5_p1 rrn5-rrn4.5 1 AGTATCGTCACCGCAGTAGA CAGCTGAGGCATCCTAACAG 20 20 50.0 55.0 58.0 58.0 0.0 8.4 0.083276 131524 131799 385-393 1.000000 83.7 rrn5-rrn4.5_p2 rrn5-rrn4.5 2 TATCGTCACCGCAGTAGAGT CAGCTGAGGCATCCTAACAG 20 20 50.0 55.0 58.0 58.0 0.0 8.4 0.083276 131524 131799 383-391 1.000000 83.7 rrn5-rrn4.5_p3 rrn5-rrn4.5 3 TATCGTCACCGCAGTAGAGT GCTGAGGCATCCTAACAGAC 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.087359 131524 131799 381-389 1.000000 83.7 rrn5-rrn4.5_p4 rrn5-rrn4.5 4 AGTATCGTCACCGCAGTAGA GTCAAGTGGAAGTGCAGTGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.080545 131524 131799 411-419 1.000000 83.4 rrn5-rrn4.5_p5 rrn5-rrn4.5 5 TATCGTCACCGCAGTAGAGT GTCAAGTGGAAGTGCAGTGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.080545 131524 131799 409-417 1.000000 83.4