feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GUG tRNA trnH-GUG trnH-GUG 3 77 -1 75 Genome 0.037895 27 75 43 31 no 0.047619 3 0.333333 0.037895 1.000000 54.800000 IGS_001 igs trnH-GUG|psbA trnH-GUG-psbA 78 490 0 413 Genome 0.031668 85 305 118 201 yes 0.857143 19 0.947368 0.028196 0.992736 75.200000 psbA gene psbA psbA 491 1552 -1 1062 Genome 0.003336 20 0 11 164 no 0.571429 14 0.857143 0.003336 1.000000 40.400000 IGS_002 igs psbA|trnK-UUU psbA-trnK-UUU 1553 1874 0 322 Genome 0.022089 34 55 158 47 no 0.714286 17 0.882353 0.020233 0.972050 63.700000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1875 1909 -1 35 Genome 0.000000 0 0 3 12 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 matK gene matK matK 2146 3666 -1 1521 Genome 0.009455 92 0 32 22 no 0.619048 16 0.812500 0.009455 1.000000 50.000000 IGS_005 igs matK|trnK-UUU matK-trnK-UUU 3667 4379 0 713 Genome 0.011479 48 230 148 40 no 0.761905 18 0.888889 0.011105 1.000000 61.600000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4380 4416 -1 37 Genome 0.000000 0 0 11 3 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 IGS_006 igs trnK-UUU|rbcL trnK-UUU-rbcL 4417 5033 0 617 Genome 0.027057 75 263 48 89 no 0.714286 17 0.882353 0.024566 0.961102 70.500000 rbcL gene rbcL rbcL 5034 6461 -1 1428 Genome 0.007976 51 5 161 249 no 0.571429 14 0.857143 0.007959 1.000000 56.300000 IGS_007 igs rbcL|atpB rbcL-atpB 6462 7225 0 764 Genome 0.018288 70 278 83 59 no 0.666667 17 0.823529 0.017174 0.993455 66.600000 atpB gene atpB atpB 7226 8698 1 1473 Genome 0.006230 55 0 57 57 no 0.666667 16 0.875000 0.006230 1.000000 49.200000 IGS_008 igs atpB|atpE atpB-atpE 8699 8718 0 20 Genome 0.013810 2 0 3 37 no 0.047619 3 0.333333 0.013810 1.000000 38.600000 atpE gene atpE atpE 8719 9132 1 414 Genome 0.021952 37 21 23 26 no 0.523810 14 0.785714 0.020946 1.000000 59.700000 IGS_009 igs atpE|trnM-CAU atpE-trnM-CAU 9133 9285 0 153 Genome 0.024047 20 34 1 142 no 0.571429 14 0.857143 0.025380 0.973856 57.600000 trnM-CAU tRNA trnM-CAU trnM-CAU 9286 9358 -1 73 Genome 0.000000 0 0 78 69 no 0.000000 1 0.000000 0.000000 1.000000 23.900000 IGS_010 igs trnM-CAU|trnV-UAC trnM-CAU-trnV-UAC 9359 9526 0 168 Genome 0.010714 13 4 151 279 no 0.476190 12 0.833333 0.010743 1.000000 56.400000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 9527 9562 1 36 Genome 0.000000 0 0 77 243 no 0.000000 1 0.000000 0.000000 1.000000 24.500000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 10145 10181 1 37 Genome 0.000000 0 0 300 40 no 0.000000 1 0.000000 0.000000 1.000000 21.800000 IGS_013 igs trnV-UAC|ndhC trnV-UAC-ndhC 10182 10630 0 449 Genome 0.032714 80 224 300 300 yes 0.571429 15 0.800000 0.034315 0.977728 78.000000 ndhC gene ndhC ndhC 10631 10993 1 363 Genome 0.004959 12 0 40 263 no 0.476190 12 0.833333 0.004959 1.000000 38.400000 IGS_014 igs ndhC|ndhK ndhC-ndhK 10994 11035 0 42 Genome 0.002268 1 0 60 221 no 0.047619 2 0.500000 0.002268 1.000000 28.100000 ndhK gene ndhK ndhK 11036 11719 1 684 Genome 0.004999 23 0 102 39 no 0.523810 13 0.846154 0.004999 1.000000 44.200000 IGS_015 igs ndhK|ndhJ ndhK-ndhJ 11720 11829 0 110 Genome 0.010649 7 9 30 9 no 0.428571 12 0.750000 0.010866 0.990909 46.000000 ndhJ gene ndhJ ndhJ 11830 12306 1 477 Genome 0.006289 16 0 70 45 no 0.380952 10 0.800000 0.006289 1.000000 40.000000 IGS_016 igs ndhJ|trnF-GAA ndhJ-trnF-GAA 12307 12996 0 690 Genome 0.020125 68 374 93 86 no 0.666667 17 0.823529 0.021133 0.998551 69.000000 trnF-GAA tRNA trnF-GAA trnF-GAA 12997 13069 -1 73 Genome 0.001305 1 0 27 13 no 0.047619 2 0.500000 0.001305 1.000000 22.900000 IGS_017 igs trnF-GAA|trnL-UAA trnF-GAA-trnL-UAA 13070 13210 0 141 Genome 0.023397 22 34 100 127 no 0.571429 15 0.800000 0.023654 0.992908 64.900000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 13211 13260 -1 50 Genome 0.005524 2 0 14 77 no 0.047619 3 0.333333 0.005524 1.000000 28.200000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 13612 13648 -1 37 Genome 0.000000 0 0 131 0 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_020 igs trnL-UAA|trnT-UGU trnL-UAA-trnT-UGU 13649 14860 0 1212 Genome 0.024427 158 713 168 138 yes 0.714286 17 0.882353 0.021814 0.982673 75.600000 trnT-UGU tRNA trnT-UGU trnT-UGU 14861 14933 1 73 Genome 0.000000 0 1 136 65 no 0.047619 2 0.500000 0.000000 1.000000 26.200000 IGS_021 igs trnT-UGU|rps4 trnT-UGU-rps4 14934 15256 0 323 Genome 0.022322 43 115 209 108 no 0.476190 13 0.769231 0.021959 0.975232 63.000000 rps4 gene rps4 rps4 15257 15862 1 606 Genome 0.008094 28 3 71 103 no 0.476190 13 0.769231 0.008096 1.000000 49.300000 IGS_022 igs rps4|trnS-GGA rps4-trnS-GGA 15863 16081 0 219 Genome 0.011459 20 76 107 67 no 0.380952 12 0.666667 0.011037 0.981735 52.400000 trnS-GGA tRNA trnS-GGA trnS-GGA 16082 16169 -1 88 Genome 0.005952 2 0 30 79 no 0.047619 3 0.333333 0.005952 1.000000 27.400000 IGS_023 igs trnS-GGA|ycf3 trnS-GGA-ycf3 16170 16406 0 237 Genome 0.018666 26 10 20 152 no 0.523810 14 0.785714 0.018719 1.000000 56.200000 ycf3 gene ycf3 ycf3 16407 18365 1 1959 Genome 0.007360 91 74 28 22 no 0.666667 16 0.875000 0.007349 0.998469 51.800000 IGS_024 igs ycf3|psaA ycf3-psaA 18366 19054 0 689 Genome 0.021011 81 116 51 110 no 0.714286 17 0.882353 0.017155 0.982583 69.400000 psaA gene psaA psaA 19055 21331 1 2277 Genome 0.003210 55 24 116 261 no 0.714286 16 0.937500 0.003220 1.000000 51.200000 IGS_025 igs psaA|psaB psaA-psaB 21332 21356 0 25 Genome 0.007238 1 0 300 236 no 0.000000 2 0.000000 0.007238 1.000000 42.000000 psaB gene psaB psaB 21357 23561 1 2205 Genome 0.004153 55 0 300 130 no 0.571429 15 0.800000 0.004153 1.000000 49.000000 IGS_026 igs psaB|rps14 psaB-rps14 23562 23684 0 123 Genome 0.009137 10 0 210 7 no 0.333333 8 0.875000 0.009137 1.000000 39.800000 rps14 gene rps14 rps14 23685 23987 1 303 Genome 0.008235 15 0 300 7 no 0.333333 9 0.777778 0.008235 1.000000 35.500000 IGS_027 igs rps14|trnfM-CAU rps14-trnfM-CAU 23988 24155 0 168 Genome 0.014966 13 3 169 5 no 0.333333 10 0.700000 0.015107 1.000000 43.900000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 24156 24229 1 74 Genome 0.012999 5 0 145 30 no 0.142857 6 0.500000 0.012999 1.000000 38.000000 IGS_028 igs trnfM-CAU|trnG-GCC trnfM-CAU-trnG-GCC 24230 24336 0 107 Genome 0.053063 27 44 68 77 no 0.619048 15 0.866667 0.045519 0.971963 74.200000 trnG-GCC tRNA trnG-GCC trnG-GCC 24337 24407 -1 71 Genome 0.001341 1 0 41 6 no 0.047619 2 0.500000 0.001341 1.000000 22.500000 IGS_029 igs trnG-GCC|psbZ trnG-GCC-psbZ 24408 25020 0 613 Genome 0.056750 140 378 112 240 yes 0.619048 16 0.812500 0.046304 0.898858 81.200000 psbZ gene psbZ psbZ 25021 25209 -1 189 Genome 0.002016 4 0 76 51 no 0.142857 4 0.750000 0.002016 1.000000 28.800000 IGS_030 igs psbZ|trnS-UGA psbZ-trnS-UGA 25210 25528 0 319 Genome 0.010912 29 1 265 118 no 0.380952 11 0.727273 0.010920 1.000000 51.800000 trnS-UGA tRNA trnS-UGA trnS-UGA 25529 25617 1 89 Genome 0.008133 4 0 267 29 no 0.000000 2 0.000000 0.008133 1.000000 30.200000 IGS_031 igs trnS-UGA|psbC trnS-UGA-psbC 25618 25889 0 272 Genome 0.018865 28 73 300 117 no 0.666667 17 0.823529 0.015288 0.816176 59.100000 psbC gene psbC psbC 25890 27311 -1 1422 Genome 0.004049 37 0 88 300 no 0.571429 14 0.857143 0.004049 1.000000 47.400000 psbD gene psbD psbD 27259 28320 -1 1062 Genome 0.002726 18 0 300 55 no 0.380952 12 0.666667 0.002726 1.000000 39.600000 IGS_033 igs psbD|trnT-GGU psbD-trnT-GGU 28321 29761 0 1441 Genome 0.019903 146 882 300 184 yes 0.761905 18 0.888889 0.018572 0.995142 78.800000 trnT-GGU tRNA trnT-GGU trnT-GGU 29762 29833 -1 72 Genome 0.001323 1 0 25 112 no 0.047619 2 0.500000 0.001323 1.000000 23.800000 IGS_034 igs trnT-GGU|trnE-UUC trnT-GGU-trnE-UUC 29834 30415 0 582 Genome 0.017563 63 40 97 4 no 0.571429 15 0.800000 0.017412 1.000000 62.100000 trnE-UUC tRNA trnE-UUC trnE-UUC 30416 30488 1 73 Genome 0.007045 1 0 7 31 no 0.000000 2 0.000000 0.007045 1.000000 24.200000 IGS_035 igs trnE-UUC|trnY-GUA trnE-UUC-trnY-GUA 30489 30548 0 60 Genome 0.034762 10 0 68 109 no 0.380952 11 0.727273 0.034762 1.000000 59.100000 trnY-GUA tRNA trnY-GUA trnY-GUA 30549 30632 1 84 Genome 0.001134 1 0 10 25 no 0.047619 2 0.500000 0.001134 1.000000 22.400000 IGS_036 igs trnY-GUA|trnD-GUC trnY-GUA-trnD-GUC 30633 31058 0 426 Genome 0.019089 52 143 94 130 no 0.619048 16 0.812500 0.019655 1.000000 66.400000 trnD-GUC tRNA trnD-GUC trnD-GUC 31059 31132 1 74 Genome 0.000000 0 0 1 56 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_037 igs trnD-GUC|psbM trnD-GUC-psbM 31133 31524 0 392 Genome 0.012121 28 108 75 238 no 0.761905 17 0.941176 0.011384 0.997449 60.600000 psbM gene psbM psbM 31525 31629 1 105 Genome 0.004354 3 0 148 133 no 0.190476 5 0.800000 0.004354 1.000000 37.800000 IGS_038 igs psbM|petN psbM-petN 31630 32293 0 664 Genome 0.025258 91 296 253 148 yes 0.714286 17 0.882353 0.023479 1.000000 78.000000 petN gene petN petN 32294 32389 -1 96 Genome 0.001984 2 0 97 52 no 0.095238 3 0.666667 0.001984 1.000000 27.900000 IGS_039 igs petN|trnC-GCA petN-trnC-GCA 32390 33405 0 1016 Genome 0.028424 159 446 193 90 no 0.619048 16 0.812500 0.027719 0.973425 72.200000 trnC-GCA tRNA trnC-GCA trnC-GCA 33406 33476 -1 71 Genome 0.002683 2 0 31 19 no 0.095238 3 0.666667 0.002683 1.000000 26.700000 IGS_040 igs trnC-GCA|rpoB trnC-GCA-rpoB 33477 34540 0 1064 Genome 0.020545 126 591 102 44 no 0.714286 17 0.882353 0.020944 0.987782 67.200000 rpoB gene rpoB rpoB 34541 37753 1 3213 Genome 0.005819 116 0 13 278 no 0.666667 16 0.875000 0.005819 1.000000 42.100000 IGS_041 igs rpoB|rpoC1 rpoB-rpoC1 37754 37780 0 27 Genome 0.000000 0 1 300 251 no 0.047619 2 0.500000 0.000000 0.962963 37.700000 rpoC1 gene rpoC1 rpoC1 37781 40611 1 2831 Genome 0.008468 147 782 300 133 no 0.761905 18 0.888889 0.007905 0.999647 62.200000 IGS_042 igs rpoC1|rpoC2 rpoC1-rpoC2 40612 40797 0 186 Genome 0.011626 17 41 48 260 no 0.476190 12 0.833333 0.011817 1.000000 53.800000 rpoC2 gene rpoC2 rpoC2 40798 44910 1 4113 Genome 0.009813 245 27 52 115 no 0.714286 16 0.937500 0.009797 1.000000 50.100000 IGS_043 igs rpoC2|rps2 rpoC2-rps2 44911 45157 0 247 Genome 0.020920 29 12 8 72 no 0.571429 14 0.857143 0.020935 1.000000 57.900000 rps2 gene rps2 rps2 45158 45868 1 711 Genome 0.007468 34 0 26 78 no 0.476190 12 0.833333 0.007468 1.000000 45.200000 IGS_044 igs rps2|atpI rps2-atpI 45869 46081 0 213 Genome 0.012141 15 48 138 300 no 0.571429 14 0.857143 0.011155 1.000000 59.800000 atpI gene atpI atpI 46082 46825 1 744 Genome 0.003155 14 0 22 96 no 0.333333 11 0.636364 0.003155 1.000000 36.700000 IGS_045 igs atpI|atpH atpI-atpH 46826 47824 0 999 Genome 0.028289 131 415 9 218 no 0.714286 17 0.882353 0.027801 0.974975 68.400000 atpH gene atpH atpH 47825 48070 1 246 Genome 0.003833 6 0 109 53 no 0.142857 5 0.600000 0.003833 1.000000 30.200000 IGS_046 igs atpH|atpF atpH-atpF 48071 48622 0 552 Genome 0.032172 80 230 27 200 no 0.666667 17 0.823529 0.031470 0.952899 68.800000 atpF gene atpF atpF 48623 49870 1 1248 Genome 0.008710 68 29 58 46 no 0.666667 16 0.875000 0.008339 1.000000 54.400000 IGS_047 igs atpF|atpA atpF-atpA 49871 49954 0 84 Genome 0.017972 11 6 6 8 no 0.285714 9 0.666667 0.017077 1.000000 51.000000 atpA gene atpA atpA 49955 51487 1 1533 Genome 0.004249 48 0 21 2 no 0.619048 16 0.812500 0.004249 1.000000 42.500000 IGS_048 igs atpA|trnR-UCU atpA-trnR-UCU 51488 51691 0 204 Genome 0.050090 61 105 70 87 yes 0.714286 16 0.937500 0.050507 0.995098 76.700000 trnR-UCU tRNA trnR-UCU trnR-UCU 51692 51763 -1 72 Genome 0.001323 1 0 42 15 no 0.047619 2 0.500000 0.001323 1.000000 23.100000 IGS_049 igs trnR-UCU|trnG-UCC trnR-UCU-trnG-UCC 51764 52008 0 245 Genome 0.033841 46 24 114 130 no 0.523810 15 0.733333 0.034435 1.000000 70.800000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 52009 52057 -1 49 Genome 0.000000 0 0 33 81 no 0.000000 1 0.000000 0.000000 1.000000 21.200000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 52741 52763 -1 23 Genome 0.000000 0 0 16 54 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 IGS_052 igs trnG-UCC|trnS-GCU trnG-UCC-trnS-GCU 52764 53147 0 384 Genome 0.030919 58 79 39 121 no 0.761905 18 0.888889 0.025191 0.979167 69.100000 trnS-GCU tRNA trnS-GCU trnS-GCU 53148 53233 1 86 Genome 0.000000 0 0 13 35 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_053 igs trnS-GCU|psbI trnS-GCU-psbI 53234 53420 0 187 Genome 0.046433 33 65 99 75 no 0.619048 16 0.812500 0.043684 0.877005 69.800000 psbI gene psbI psbI 53421 53531 -1 111 Genome 0.003175 2 0 14 33 no 0.047619 3 0.333333 0.003175 1.000000 24.400000 IGS_054 igs psbI|psbK psbI-psbK 53532 53849 0 318 Genome 0.013984 33 9 35 300 no 0.666667 16 0.875000 0.014114 0.993711 56.200000 psbK gene psbK psbK 53850 54035 -1 186 Genome 0.002509 4 0 32 156 no 0.142857 5 0.600000 0.002509 1.000000 27.600000 IGS_055 igs psbK|trnQ-UUG psbK-trnQ-UUG 54036 54472 0 437 Genome 0.032331 83 218 218 8 no 0.571429 14 0.857143 0.031777 1.000000 65.000000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 54473 54544 1 72 Genome 0.025728 8 0 4 12 no 0.190476 8 0.500000 0.025728 1.000000 46.700000 IGS_056 igs trnQ-UUG|accD trnQ-UUG-accD 54545 55738 0 1194 Genome 0.079440 499 1132 9 9 yes 0.809524 19 0.894737 0.116123 0.999162 75.900000 accD gene accD accD 55739 57928 1 2190 Genome 0.118000 768 1361 10 15 yes 0.809524 19 0.894737 0.081435 0.763470 71.500000 IGS_057 igs accD|psaI accD-psaI 57929 58363 0 435 Genome 0.026739 81 171 3 108 no 0.476190 14 0.714286 0.025118 0.937931 58.100000 psaI gene psaI psaI 58364 58468 1 105 Genome 0.004535 5 0 69 3 no 0.238095 6 0.833333 0.004535 1.000000 31.400000 IGS_058 igs psaI|ycf4 psaI-ycf4 58469 58604 0 136 Genome 0.020591 15 32 174 251 no 0.476190 12 0.833333 0.018397 1.000000 67.600000 ycf4 gene ycf4 ycf4 58605 59279 1 675 Genome 0.008198 38 9 35 2 no 0.571429 14 0.857143 0.008217 1.000000 48.200000 IGS_059 igs ycf4|cemA ycf4-cemA 59280 59605 0 326 Genome 0.049598 50 163 32 71 no 0.523810 14 0.785714 0.022590 0.926380 68.500000 cemA gene cemA cemA 59606 60295 1 690 Genome 0.009676 45 0 5 5 no 0.571429 14 0.857143 0.009676 1.000000 48.600000 IGS_060 igs cemA|petA cemA-petA 60296 60500 0 205 Genome 0.011847 16 12 231 33 no 0.428571 13 0.692308 0.011941 1.000000 50.400000 petA gene petA petA 60501 61463 1 963 Genome 0.006463 45 0 48 18 no 0.619048 14 0.928571 0.006463 1.000000 46.700000 IGS_061 igs petA|psbJ petA-psbJ 61464 62480 0 1017 Genome 0.020317 115 400 225 74 no 0.714286 17 0.882353 0.019294 0.987217 69.900000 psbJ gene psbJ psbJ 62481 62603 -1 123 Genome 0.010530 6 0 168 300 no 0.142857 7 0.428571 0.010530 1.000000 44.900000 IGS_062 igs psbJ|psbL psbJ-psbL 62604 62739 0 136 Genome 0.004949 6 2 14 182 no 0.238095 8 0.625000 0.004736 1.000000 33.800000 psbL gene psbL psbL 62740 62856 -1 117 Genome 0.000814 1 0 150 65 no 0.047619 2 0.500000 0.000814 1.000000 26.000000 IGS_063 igs psbL|psbF psbL-psbF 62857 62878 0 22 Genome 0.000000 0 0 267 43 no 0.000000 1 0.000000 0.000000 1.000000 22.000000 psbF gene psbF psbF 62879 62998 -1 120 Genome 0.008016 2 0 289 111 no 0.047619 3 0.333333 0.008016 1.000000 33.700000 IGS_064 igs psbF|psbE psbF-psbE 62999 63007 0 9 Genome 0.000000 0 0 74 102 no 0.000000 1 0.000000 NA 1.000000 24.300000 psbE gene psbE psbE 63008 63259 -1 252 Genome 0.005933 10 0 83 59 no 0.238095 8 0.625000 0.005933 1.000000 35.300000 IGS_065 igs psbE|petL psbE-petL 63260 63873 0 614 Genome 0.018770 66 74 149 158 no 0.619048 15 0.866667 0.018489 0.975570 73.700000 petL gene petL petL 63874 63969 1 96 Genome 0.003968 4 0 159 62 no 0.142857 4 0.750000 0.003968 1.000000 33.100000 IGS_066 igs petL|petG petL-petG 63970 64133 0 164 Genome 0.014373 17 1 255 86 no 0.380952 12 0.666667 0.014380 1.000000 52.100000 petG gene petG petG 64134 64247 1 114 Genome 0.007686 3 0 46 46 no 0.000000 4 0.000000 0.007686 1.000000 28.900000 IGS_067 igs petG|trnW-CCA petG-trnW-CCA 64248 64404 0 157 Genome 0.027799 30 94 27 189 no 0.571429 14 0.857143 0.028144 1.000000 61.600000 trnW-CCA tRNA trnW-CCA trnW-CCA 64405 64478 -1 74 Genome 0.000000 0 0 41 115 no 0.000000 1 0.000000 0.000000 1.000000 21.800000 IGS_068 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 64479 64629 0 151 Genome 0.020512 22 8 115 155 no 0.571429 14 0.857143 0.020235 1.000000 66.000000 trnP-UGG tRNA trnP-UGG trnP-UGG 64630 64703 -1 74 Genome 0.005019 3 0 3 81 no 0.047619 3 0.333333 0.005019 1.000000 27.200000 IGS_069 igs trnP-UGG|psaJ trnP-UGG-psaJ 64704 65107 0 404 Genome 0.037537 77 156 77 127 no 0.666667 17 0.823529 0.035103 0.990099 73.400000 psaJ gene psaJ psaJ 65108 65236 1 129 Genome 0.005463 5 0 33 18 no 0.190476 6 0.666667 0.005463 1.000000 31.000000 IGS_070 igs psaJ|rpl33 psaJ-rpl33 65237 65761 0 525 Genome 0.019775 62 93 1 20 no 0.619048 16 0.812500 0.020162 0.992381 62.000000 rpl33 gene rpl33 rpl33 65762 65962 1 201 Genome 0.005307 7 0 39 13 no 0.238095 7 0.714286 0.005307 1.000000 30.900000 IGS_071 igs rpl33|rps18 rpl33-rps18 65963 66184 0 222 Genome 0.038518 41 81 180 24 no 0.666667 16 0.875000 0.035068 0.932432 65.800000 rps18 gene rps18 rps18 66185 66517 1 333 Genome 0.014257 25 6 33 21 no 0.523810 14 0.785714 0.014335 1.000000 48.800000 IGS_072 igs rps18|rpl20 rps18-rpl20 66518 66716 0 199 Genome 0.032330 35 24 9 81 no 0.571429 15 0.800000 0.027721 0.989950 62.600000 rpl20 gene rpl20 rpl20 66717 67142 -1 426 Genome 0.018142 47 11 11 41 no 0.571429 15 0.800000 0.018259 0.995305 56.600000 IGS_073 igs rpl20|rps12 rpl20-rps12 67143 67871 0 729 Genome 0.009673 41 20 39 105 no 0.571429 15 0.800000 0.009762 0.991770 53.100000 rps12_part1 gene rps12 rps12 67872 67985 -1 114 Genome 0.003091 2 0 143 21 no 0.047619 3 0.333333 0.003091 1.000000 24.800000 IGS_074 igs rps12|clpP rps12-clpP 67986 68854 0 869 Genome 0.161569 475 702 8 0 yes 0.904762 20 0.950000 0.129593 0.928654 76.400000 clpP gene clpP clpP 68855 70073 -1 1219 Genome 0.042053 270 752 0 21 yes 0.809524 19 0.894737 0.040901 0.989336 76.000000 IGS_075 igs clpP|psbB clpP-psbB 70074 70539 0 466 Genome 0.019943 55 65 26 101 no 0.523810 14 0.785714 0.019960 0.946352 59.200000 psbB gene psbB psbB 70540 72066 1 1527 Genome 0.004285 47 0 62 61 no 0.666667 16 0.875000 0.004285 1.000000 47.800000 IGS_076 igs psbB|psbT psbB-psbT 72067 72206 0 140 Genome 0.016054 15 2 210 69 no 0.333333 10 0.700000 0.016073 1.000000 51.700000 psbT gene psbT psbT 72207 72314 1 108 Genome 0.005644 2 0 75 39 no 0.047619 3 0.333333 0.005644 1.000000 27.400000 IGS_077 igs psbT|psbN psbT-psbN 72315 72380 0 66 Genome 0.036983 9 6 38 84 no 0.142857 5 0.600000 0.036746 1.000000 59.500000 psbN gene psbN psbN 72381 72512 -1 132 Genome 0.004654 3 0 23 35 no 0.095238 5 0.400000 0.004654 1.000000 27.200000 IGS_078 igs psbN|psbH psbN-psbH 72513 72618 0 106 Genome 0.015556 12 10 47 300 no 0.523810 15 0.733333 0.016717 0.933962 55.100000 psbH gene psbH psbH 72619 72837 1 219 Genome 0.003827 7 0 70 94 no 0.142857 5 0.600000 0.003827 1.000000 32.400000 IGS_079 igs psbH|petB psbH-petB 72838 72982 0 145 Genome 0.008867 10 7 289 218 no 0.333333 10 0.700000 0.008977 1.000000 58.400000 petB gene petB petB 72983 74441 1 1459 Genome 0.012151 91 124 50 126 no 0.666667 17 0.823529 0.011161 0.998629 60.500000 IGS_080 igs petB|petD petB-petD 74442 74638 0 197 Genome 0.011924 16 18 144 74 no 0.523810 13 0.846154 0.011960 1.000000 55.700000 petD gene petD petD 74639 75835 1 1197 Genome 0.007717 53 16 44 31 no 0.666667 16 0.875000 0.007691 1.000000 50.400000 IGS_081 igs petD|rpoA petD-rpoA 75836 76014 0 179 Genome 0.018196 18 39 300 40 no 0.333333 11 0.636364 0.018231 1.000000 54.600000 rpoA gene rpoA rpoA 76015 77016 -1 1002 Genome 0.008545 54 0 56 90 no 0.571429 15 0.800000 0.008545 1.000000 50.500000 IGS_082 igs rpoA|rps11 rpoA-rps11 77017 77116 0 100 Genome 0.016275 9 21 112 23 no 0.333333 9 0.777778 0.016275 0.790000 42.700000 rps11 gene rps11 rps11 77117 77533 -1 417 Genome 0.009695 21 0 9 11 no 0.380952 11 0.727273 0.009695 1.000000 39.700000 IGS_083 igs rps11|rpl36 rps11-rpl36 77534 77861 0 328 Genome 0.023705 37 49 241 63 no 0.571429 14 0.857143 0.019725 0.993902 63.500000 rpl36 gene rpl36 rpl36 77862 77975 -1 114 Genome 0.005180 2 0 13 5 no 0.047619 3 0.333333 0.005180 1.000000 24.500000 IGS_084 igs rpl36|rps8 rpl36-rps8 77976 78409 0 434 Genome 0.020888 51 158 50 27 no 0.523810 14 0.785714 0.021407 0.997696 59.900000 rps8 gene rps8 rps8 78410 78814 -1 405 Genome 0.006808 20 0 13 24 no 0.523810 12 0.916667 0.006808 1.000000 41.000000 IGS_085 igs rps8|rpl14 rps8-rpl14 78815 79487 0 673 Genome 0.034520 127 359 32 69 no 0.761905 18 0.888889 0.034463 0.998514 74.500000 rpl14 gene rpl14 rpl14 79488 79856 -1 369 Genome 0.002881 8 369 55 3 no 0.333333 9 0.777778 0.002881 1.000000 35.400000 IGS_086 igs rpl14|rpl16 rpl14-rpl16 79857 79985 0 129 Genome 0.004616 3 129 299 221 no 0.285714 9 0.666667 0.004658 0.945736 46.500000 rpl16 gene rpl16 rpl16 79986 81478 -1 1493 Genome 0.011315 93 1486 125 10 no 0.619048 16 0.812500 0.010582 0.997321 54.700000 IGS_087 igs rpl16|rps3 rpl16-rps3 81479 81619 0 141 Genome 0.016139 13 141 37 62 no 0.428571 12 0.750000 0.016739 1.000000 52.400000 rps3 gene rps3 rps3 81620 82264 -1 645 Genome 0.015341 59 645 10 75 no 0.619048 15 0.866667 0.015348 1.000000 60.400000 IGS_088 igs rps3|rps19 rps3-rps19 82265 82723 0 459 Genome 0.027519 59 451 49 9 no 0.761905 18 0.888889 0.018785 0.960784 64.200000 rps19 gene rps19 rps19 82724 83002 -1 279 Genome 0.007772 12 279 27 53 no 0.285714 8 0.750000 0.007772 1.000000 39.800000 IGS_089 igs rps19|rpl2 rps19-rpl2 83003 83172 0 170 Genome 0.011966 16 170 209 12 no 0.476190 12 0.833333 0.011429 1.000000 49.900000 rpl2 gene rpl2 rpl2 83173 84693 -1 1521 Genome 0.007168 62 1521 115 122 no 0.619048 16 0.812500 0.007110 1.000000 58.200000 IGS_090 igs rpl2|rpl23 rpl2-rpl23 84694 84713 0 20 Genome 0.010263 2 20 34 102 no 0.142857 4 0.750000 0.010526 1.000000 45.500000 rpl23 gene rpl23 rpl23 84714 84995 -1 282 Genome 0.011646 21 282 54 164 no 0.380952 11 0.727273 0.011646 1.000000 49.300000 IGS_091 igs rpl23|trnI-CAU rpl23-trnI-CAU 84996 85626 0 631 Genome 0.114543 202 631 15 76 yes 1.000000 21 1.000000 0.078986 0.757528 76.800000 trnI-CAU tRNA trnI-CAU trnI-CAU 85627 85700 -1 74 Genome 0.000000 0 74 16 2 no 0.000000 2 0.000000 0.000000 1.000000 22.200000 IGS_092 igs trnI-CAU|ycf2 trnI-CAU-ycf2 85701 85813 0 113 Genome 0.060733 33 113 90 8 no 0.571429 15 0.800000 0.060419 1.000000 67.000000 ycf2 gene ycf2 ycf2 85814 91342 1 5529 Genome 0.033796 885 5529 0 70 yes 0.761905 18 0.888889 0.032154 0.996744 64.900000 IGS_093 igs ycf2|trnL-CAA ycf2-trnL-CAA 91343 91639 0 297 Genome 0.007750 18 297 300 105 no 0.380952 10 0.800000 0.007668 1.000000 48.600000 trnL-CAA tRNA trnL-CAA trnL-CAA 91640 91720 -1 81 Genome 0.000000 0 81 100 24 no 0.047619 2 0.500000 0.000000 1.000000 26.200000 IGS_094 igs trnL-CAA|ndhB trnL-CAA-ndhB 91721 92153 0 433 Genome 0.018921 53 433 181 240 no 0.523810 14 0.785714 0.018769 1.000000 70.300000 ndhB gene ndhB ndhB 92154 94320 -1 2167 Genome 0.006796 91 2167 214 93 no 0.666667 17 0.823529 0.006803 1.000000 56.100000 IGS_095 igs ndhB|rps7 ndhB-rps7 94321 94595 0 275 Genome 0.010852 22 275 94 76 no 0.619048 15 0.866667 0.010861 1.000000 55.700000 rps7 gene rps7 rps7 94596 95063 -1 468 Genome 0.007883 17 468 181 14 no 0.428571 13 0.692308 0.007883 1.000000 44.200000 IGS_096 igs rps7|rps12 rps7-rps12 95064 95115 0 52 Genome 0.012348 3 52 179 21 no 0.142857 5 0.600000 0.012348 1.000000 40.500000 rps12_part2 gene rps12 rps12 95116 95373 -1 258 Genome 0.005528 7 258 37 64 no 0.333333 9 0.777778 0.005528 1.000000 38.400000 IGS_097 igs rps12|trnV-GAC rps12-trnV-GAC 95374 96802 0 1429 Genome 0.021451 160 1429 53 50 no 0.809524 19 0.894737 0.018157 0.982505 68.800000 trnV-GAC tRNA trnV-GAC trnV-GAC 96803 96874 1 72 Genome 0.014985 7 72 3 38 no 0.142857 5 0.600000 0.015580 1.000000 45.200000 IGS_098 igs trnV-GAC|rrn16 trnV-GAC-rrn16 96875 97094 0 220 Genome 0.025044 32 220 21 300 no 0.476190 14 0.714286 0.024899 1.000000 57.400000 rrn16 rRNA rrn16 rrn16 97095 98586 1 1492 Genome 0.001700 16 1492 9 15 no 0.428571 11 0.818182 0.001700 1.000000 40.600000 IGS_099 igs rrn16|trnI-GAU rrn16-trnI-GAU 98587 98895 0 309 Genome 0.068713 104 309 300 300 yes 0.619048 15 0.866667 0.069149 1.000000 85.200000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 98896 98932 1 37 Genome 0.000000 0 37 77 273 no 0.047619 2 0.500000 0.000000 1.000000 30.200000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 99622 99656 1 35 Genome 0.014887 1 35 154 27 no 0.047619 3 0.333333 0.014887 1.000000 36.700000 IGS_102 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 99657 99721 0 65 Genome 0.017247 7 65 5 75 no 0.238095 7 0.714286 0.017247 1.000000 48.600000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 99722 99759 1 38 Genome 0.000000 0 38 37 37 no 0.047619 2 0.500000 0.000000 1.000000 27.200000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 100575 100609 1 35 Genome 0.000000 0 35 207 20 no 0.047619 2 0.500000 0.000000 1.000000 25.900000 IGS_105 igs trnA-UGC|rrn23 trnA-UGC-rrn23 100610 100780 0 171 Genome 0.021737 18 171 242 284 no 0.333333 12 0.583333 0.021129 1.000000 66.800000 rrn23 rRNA rrn23 rrn23 100781 103577 1 2797 Genome 0.002412 37 2797 80 211 no 0.619048 15 0.866667 0.002412 1.000000 47.400000 IGS_106 igs rrn23|rrn4.5 rrn23-rrn4.5 103578 103677 0 100 Genome 0.003000 3 100 300 111 no 0.142857 4 0.750000 0.003000 1.000000 39.600000 rrn4.5 rRNA rrn4.5 rrn4.5 103678 103781 1 104 Genome 0.000962 1 104 300 7 no 0.095238 3 0.666667 0.000962 1.000000 27.500000 IGS_107 igs rrn4.5|rrn5 rrn4.5-rrn5 103782 104006 0 225 Genome 0.004702 8 225 300 130 no 0.380952 9 0.888889 0.004731 1.000000 46.900000 rrn5 rRNA rrn5 rrn5 104007 104127 1 121 Genome 0.001566 1 121 217 9 no 0.047619 3 0.333333 0.001566 1.000000 26.800000 IGS_108 igs rrn5|trnR-ACG rrn5-trnR-ACG 104128 104365 0 238 Genome 0.021207 31 238 300 120 no 0.380952 12 0.666667 0.021744 1.000000 61.500000 trnR-ACG tRNA trnR-ACG trnR-ACG 104366 104439 1 74 Genome 0.000000 0 74 32 46 no 0.047619 2 0.500000 0.000000 1.000000 26.800000 IGS_109 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 104440 104802 0 363 Genome 0.020353 41 363 106 8 no 0.714286 17 0.882353 0.020263 0.997245 58.000000 trnN-GUU tRNA trnN-GUU trnN-GUU 104803 104874 -1 72 Genome 0.004678 1 72 7 44 no 0.047619 3 0.333333 0.004678 1.000000 28.800000 IGS_110 igs trnN-GUU|ycf1 trnN-GUU-ycf1 104875 105523 0 649 Genome 0.068840 172 642 63 13 no 0.666667 15 0.933333 0.066706 0.815100 71.200000 ycf1 gene ycf1 ycf1 105524 110869 1 5346 Genome 0.037047 904 5346 13 6 no 0.904762 20 0.950000 0.036060 0.985971 69.100000 IGS_111 igs ycf1|rps15 ycf1-rps15 110870 111293 0 424 Genome 0.070756 117 424 25 92 yes 0.904762 20 0.950000 0.060310 0.969340 77.600000 rps15 gene rps15 rps15 111294 111569 1 276 Genome 0.006674 12 276 75 4 no 0.523810 13 0.846154 0.006676 1.000000 42.100000 IGS_112 igs rps15|ndhH rps15-ndhH 111570 111667 0 98 Genome 0.010150 4 98 176 8 no 0.142857 7 0.428571 0.010175 1.000000 36.400000 ndhH gene ndhH ndhH 111668 112849 1 1182 Genome 0.004831 32 1182 91 159 no 0.523810 15 0.733333 0.004831 1.000000 52.000000 IGS_113 igs ndhH|ndhA ndhH-ndhA 112850 112850 0 1 Genome 0.000000 0 1 216 158 no 0.047619 2 0.500000 NA 1.000000 36.300000 ndhA gene ndhA ndhA 112851 115189 1 2339 Genome 0.010754 123 2339 217 151 no 0.714286 17 0.882353 0.008747 0.988029 63.700000 IGS_114 igs ndhA|ndhI ndhA-ndhI 115190 115268 0 79 Genome 0.007595 6 79 210 72 no 0.238095 6 0.833333 0.007595 1.000000 46.300000 ndhI gene ndhI ndhI 115269 115754 1 486 Genome 0.002588 10 486 289 7 no 0.428571 11 0.818182 0.002608 1.000000 39.600000 IGS_115 igs ndhI|ndhG ndhI-ndhG 115755 116052 0 298 Genome 0.025053 28 295 300 54 no 0.523810 15 0.733333 0.018327 0.953020 58.100000 ndhG gene ndhG ndhG 116053 116583 1 531 Genome 0.003608 14 531 68 10 no 0.333333 10 0.700000 0.003608 1.000000 40.200000 IGS_116 igs ndhG|ndhE ndhG-ndhE 116584 116768 0 185 Genome 0.009620 9 185 177 188 no 0.428571 11 0.818182 0.014552 1.000000 52.800000 ndhE gene ndhE ndhE 116769 117074 1 306 Genome 0.003371 7 306 101 30 no 0.285714 8 0.750000 0.003371 1.000000 35.600000 IGS_117 igs ndhE|psaC ndhE-psaC 117075 117374 0 300 Genome 0.006420 12 300 117 197 no 0.380952 12 0.666667 0.006231 1.000000 47.200000 psaC gene psaC psaC 117375 117620 1 246 Genome 0.002610 3 246 103 65 no 0.142857 5 0.600000 0.002610 1.000000 33.800000 IGS_118 igs psaC|ndhD psaC-ndhD 117621 117739 0 119 Genome 0.024237 9 119 48 62 no 0.142857 7 0.428571 0.024632 0.991597 49.800000 ndhD gene ndhD ndhD 117740 119236 1 1497 Genome 0.005326 51 1497 49 5 no 0.666667 16 0.875000 0.005326 1.000000 49.300000 IGS_119 igs ndhD|ccsA ndhD-ccsA 119237 119471 0 235 Genome 0.010213 13 235 276 87 no 0.380952 12 0.666667 0.010231 1.000000 48.700000 ccsA gene ccsA ccsA 119472 120443 -1 972 Genome 0.006805 41 972 105 2 no 0.619048 15 0.866667 0.006757 1.000000 49.800000 IGS_120 igs ccsA|trnL-UAG ccsA-trnL-UAG 120444 120571 0 128 Genome 0.016488 11 128 281 135 no 0.285714 10 0.600000 0.016488 1.000000 57.200000 trnL-UAG tRNA trnL-UAG trnL-UAG 120572 120651 -1 80 Genome 0.000000 0 80 11 55 no 0.047619 2 0.500000 0.000000 1.000000 25.200000 IGS_121 igs trnL-UAG|rpl32 trnL-UAG-rpl32 120652 120973 0 322 Genome 0.016349 31 322 91 256 no 0.761905 17 0.941176 0.016732 0.972050 63.100000 rpl32 gene rpl32 rpl32 120974 121126 -1 153 Genome 0.004438 5 153 56 103 no 0.190476 6 0.666667 0.004438 1.000000 37.400000 IGS_122 igs rpl32|ndhF rpl32-ndhF 121127 121838 0 712 Genome 0.019952 64 712 209 62 no 0.666667 17 0.823529 0.017159 0.973315 65.900000 ndhF gene ndhF ndhF 121839 124073 1 2235 Genome 0.007394 100 2235 104 8 no 0.714286 17 0.882353 0.007391 1.000000 51.100000 IGS_123 igs ndhF|trnH-GUG ndhF-trnH-GUG 124074 2 0 202 Genome 0.025253 36 202 13 106 no 0.571429 15 0.800000 0.025205 1.000000 58.600000