primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score pbsA-rpl35_p1 pbsA-rpl35 1 GAACCGAGATTCTGGTGGTC AGACTTGCTGCTTTGCTGTA 20 20 55.0 45.0 58.0 57.7 8.1 0.0 0.272384 6057 6764 1692-1728 1.000000 83.7 pbsA-rpl35_p2 pbsA-rpl35 2 GAACCGAGATTCTGGTGGTC GCAACAAATGACTGCGTGAA 20 20 55.0 45.0 58.0 57.9 8.1 0.0 0.129769 6057 6764 1388-1388 0.500000 59.0 pbsA-rpl35_p3 pbsA-rpl35 3 ATTGGCAACCAGGTAATGCA GCAACAAATGACTGCGTGAA 20 20 45.0 45.0 58.1 57.9 16.6 0.0 0.182429 6057 6764 1131-1131 0.500000 58.5 pbsA-rpl35_p4 pbsA-rpl35 4 AACGAACCGAGATTCTGGTG GCAACAAATGACTGCGTGAA 20 20 50.0 45.0 57.9 57.9 8.1 0.0 0.198515 6057 6764 1391-1391 0.500000 58.4 pbsA-rpl35_p5 pbsA-rpl35 5 AACCCGGATGAAGTTTGTCC GCAACAAATGACTGCGTGAA 20 20 50.0 45.0 58.1 57.9 0.7 0.0 0.212591 6057 6764 1156-1156 0.500000 58.3 pdhB-petA_p1 pdhB-petA 1 TCTGTGAGGAAATTAGTAGCT CTTTGCTGTGACACTTGCAC 21 20 38.1 50.0 53.7 58.2 0.0 20.6 5.464858 10781 10844 170-176 1.000000 46.0 pdhB-petA_p2 pdhB-petA 2 TCTGTGAGGAAATTAGTAGCT TCTTTGCTGTGACACTTGCA 21 20 38.1 45.0 53.7 58.3 0.0 18.2 5.547251 10781 10844 171-177 1.000000 46.0 pdhB-petA_p3 pdhB-petA 3 TTCTGTGAGGAAATTAGTAGCT CTTTGCTGTGACACTTGCAC 22 20 36.4 50.0 54.6 58.2 0.0 20.6 5.612035 10781 10844 171-177 1.000000 46.0 pdhB-petA_p4 pdhB-petA 4 AGATTCTGTGAGGAAATTAGTAGCT CTTTGCTGTGACACTTGCAC 25 20 36.0 50.0 57.6 58.2 0.0 20.6 5.599417 10781 10844 174-180 1.000000 45.9 pdhB-petA_p5 pdhB-petA 5 AGATTCTGTGAGGAAATTAGTAGCT TCTTTGCTGTGACACTTGCA 25 20 36.0 45.0 57.6 58.3 0.0 18.2 5.681810 10781 10844 175-181 1.000000 45.8 ycf58-cemA_p1 ycf58-cemA 1 TTGATGAGAGAGCCAGTTGC ACCTCTGCATTTGGATCGAG 20 20 50.0 50.0 57.9 57.7 0.0 6.8 0.427362 44152 46519 2550-2550 0.500000 56.6 ycf58-cemA_p2 ycf58-cemA 2 TTGATGAGAGAGCCAGTTGC CCTCTGCATTTGGATCGAGT 20 20 50.0 50.0 57.9 57.7 0.0 0.0 0.427362 44152 46519 2549-2549 0.500000 56.6 ycf58-cemA_p3 ycf58-cemA 3 GAGCCAGTTGCCTTCCATAT ACCTCTGCATTTGGATCGAG 20 20 50.0 50.0 57.6 57.7 0.0 6.8 0.677365 44152 46519 2541-2541 0.500000 54.6 ycf58-cemA_p4 ycf58-cemA 4 GAGCCAGTTGCCTTCCATAT CCTCTGCATTTGGATCGAGT 20 20 50.0 50.0 57.6 57.7 0.0 0.0 0.677365 44152 46519 2540-2540 0.500000 54.6 ycf58-cemA_p5 ycf58-cemA 5 AGAGCCAGTTGCCTTCCATA CCTCTGCATTTGGATCGAGT 20 20 50.0 50.0 58.7 57.7 0.0 0.0 1.033195 44152 46519 2541-2541 0.500000 51.7 trnMe(cat)_p1 trnMe(cat) 1 CCATCAGCAGTGGCAACTTA AACACGTATTGGTCAACCGT 20 20 50.0 45.0 58.2 57.8 0.0 0.0 0.418512 47404 49419 2404-2404 0.500000 56.7 trnMe(cat)_p2 trnMe(cat) 2 CCATCAGCAGTGGCAACTTA ACACGTATTGGTCAACCGTT 20 20 50.0 45.0 58.2 57.8 0.0 7.3 0.418512 47404 49419 2403-2403 0.500000 56.7 trnMe(cat)_p3 trnMe(cat) 3 CCATCAGCAGTGGCAACTTA CCCGCTACCCGCTTTAAATA 20 20 50.0 50.0 58.2 57.8 0.0 0.0 0.418512 47404 49419 2147-2147 0.500000 56.7 trnMe(cat)_p4 trnMe(cat) 4 AGCGATACAGCAAAGGCATT ACACGTATTGGTCAACCGTT 20 20 45.0 45.0 58.2 57.8 0.0 7.3 0.488423 47404 49419 2619-2619 0.500000 56.1 trnMe(cat)_p5 trnMe(cat) 5 AGCGATACAGCAAAGGCATT CCCGCTACCCGCTTTAAATA 20 20 45.0 50.0 58.2 57.8 0.0 0.0 0.488423 47404 49419 2363-2363 0.500000 56.1 cbbX-trnC(gca)_p1 cbbX-trnC(gca) 1 ACGATTTAGTAACTATACAATCAGA TCTGCCTTACCACTTGGCTA 25 20 28.0 50.0 53.7 58.3 0.0 0.0 9.665558 55311 55400 161-176 1.000000 48.3 cbbX-trnC(gca)_p2 cbbX-trnC(gca) 2 ACGATTTAGTAACTATACAATCAGA TTGCAATCCTCTGCCTTACC 25 20 28.0 50.0 53.7 57.9 0.0 0.0 9.446065 55311 55400 170-185 1.000000 48.1 cbbX-trnC(gca)_p3 cbbX-trnC(gca) 3 ACGATTTAGTAACTATACAATCAGA GGATTTGCAATCCTCTGCCT 25 20 28.0 50.0 53.7 58.2 0.0 16.2 9.544458 55311 55400 174-189 1.000000 48.0 cbbX-trnC(gca)_p4 cbbX-trnC(gca) 4 ACGATTTAGTAACTATACAATCAGA AGGATTTGCAATCCTCTGCC 25 20 28.0 50.0 53.7 58.2 0.0 19.0 9.544458 55311 55400 175-190 1.000000 47.9 cbbX-trnC(gca)_p5 cbbX-trnC(gca) 5 ACGATTTAGTAACTATACAATCAGA TTTTAGGCGGTACCCAGACT 25 20 28.0 50.0 53.7 58.4 0.0 6.3 9.669179 55311 55400 209-224 1.000000 47.3 ycf80_p1 ycf80 1 ACTAGGCATTGCACCAACAA AAACAAGGAGGTTGCTCTGG 20 20 45.0 50.0 58.0 58.0 11.4 0.0 0.019162 57876 59282 2161-2177 1.000000 85.6 ycf80_p2 ycf80 2 TTGCACCAACAATACCAGCT AAACAAGGAGGTTGCTCTGG 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.019162 57876 59282 2153-2169 1.000000 85.6 ycf80_p3 ycf80 3 GGCATTGCACCAACAATACC AAACAAGGAGGTTGCTCTGG 20 20 50.0 50.0 58.0 58.0 11.4 0.0 0.021869 57876 59282 2157-2173 1.000000 85.6 ycf80_p4 ycf80 4 ACCAGCTGCTCGACAATTAG AAACAAGGAGGTTGCTCTGG 20 20 50.0 50.0 58.0 58.0 8.7 0.0 0.028853 57876 59282 2140-2156 1.000000 85.5 ycf80_p5 ycf80 5 CCAGCTGCTCGACAATTAGT AAACAAGGAGGTTGCTCTGG 20 20 50.0 50.0 58.0 58.0 8.7 0.0 0.028853 57876 59282 2139-2155 1.000000 85.5 psbE-ycf63_p1 psbE-ycf63 1 ACCCTGCTACAAAAAGTGCA GCAAGAGGAGTCGGTCAATC 20 20 45.0 55.0 57.9 58.4 0.0 0.0 0.419709 84932 85643 944-973 1.000000 84.3 psbE-ycf63_p2 psbE-ycf63 2 ACCCTGCTACAAAAAGTGCA AGCTGTTCTTACATTGGCGT 20 20 45.0 45.0 57.9 57.8 0.0 0.0 0.250903 84932 85643 1359-1359 0.500000 58.0 psbE-ycf63_p3 psbE-ycf63 3 TGGCTGCTATACCACCTACA AGCTGTTCTTACATTGGCGT 20 20 50.0 45.0 57.8 57.8 0.0 0.0 0.353462 84932 85643 1937-1937 0.500000 57.2 psbE-ycf63_p4 psbE-ycf63 4 ACCCTGCTACAAAAAGTGCA TTGGTCGTGTAGGATCATGC 20 20 45.0 50.0 57.9 57.7 0.0 0.0 0.375426 84932 85643 1297-1297 0.500000 57.0 psbE-ycf63_p5 psbE-ycf63 5 AAAAAGGACGTTCACCCGTT AGCTGTTCTTACATTGGCGT 20 20 45.0 45.0 58.2 57.8 0.0 0.0 0.431074 84932 85643 1287-1287 0.500000 56.6 trnP(tgg)-ycf52_p1 trnP(tgg)-ycf52 1 GCTACCAAGCTGCGCTATAT AGGTATGTTTTGGTATCCACGT 20 22 50.0 40.9 57.9 57.4 9.7 0.0 2.649195 90703 90757 104-106 1.000000 65.7 trnP(tgg)-ycf52_p2 trnP(tgg)-ycf52 2 GCTACCAAGCTGCGCTATAT TGTTTTGGTATCCACGTTGA 20 20 50.0 40.0 57.9 55.2 9.7 0.0 2.875656 90703 90757 99-101 1.000000 64.2 trnP(tgg)-ycf52_p3 trnP(tgg)-ycf52 3 TTTGAACCTGCGACATCCTG AGGTATGTTTTGGTATCCACGT 20 22 50.0 40.9 58.5 57.4 0.0 0.0 3.040472 90703 90757 140-142 1.000000 60.8 trnP(tgg)-ycf52_p4 trnP(tgg)-ycf52 4 CAGGATTTGAACCTGCGACA AGGTATGTTTTGGTATCCACGT 20 22 50.0 40.9 58.5 57.4 0.0 0.0 3.040472 90703 90757 145-147 1.000000 60.6 trnP(tgg)-ycf52_p5 trnP(tgg)-ycf52 5 ATTTGAACCTGCGACATCCT AGGTATGTTTTGGTATCCACGT 20 22 45.0 40.9 57.5 57.4 0.0 0.0 3.060039 90703 90757 141-143 1.000000 60.6 psaF-psaJ_p1 psaF-psaJ 1 GCAGGACTAACTCCATGCAA AACGTTGCTTCCTTAAGGCA 20 20 50.0 45.0 57.9 58.0 0.0 17.3 0.138201 92101 92124 1193-1194 1.000000 83.5 psaF-psaJ_p2 psaF-psaJ 2 TTGCAGGACTAACTCCATGC AACGTTGCTTCCTTAAGGCA 20 20 50.0 45.0 57.9 58.0 0.0 17.3 0.138201 92101 92124 1195-1196 1.000000 83.5 psaF-psaJ_p3 psaF-psaJ 3 GCAGGACTAACTCCATGCAA CAGGTGCAATGTATTCGGGA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.150818 92101 92124 985-986 1.000000 83.3 psaF-psaJ_p4 psaF-psaJ 4 CCATGCAAAGAATCAGCTGC AACGTTGCTTCCTTAAGGCA 20 20 50.0 45.0 58.1 58.0 9.5 17.3 0.101770 92101 92124 1182-1182 0.500000 59.2 psaF-psaJ_p5 psaF-psaJ 5 CCATGCAAAGAATCAGCTGC CAGGTGCAATGTATTCGGGA 20 20 50.0 50.0 58.1 58.0 9.5 0.0 0.114387 92101 92124 974-974 0.500000 59.1 trnL(tag)-trnN(gtt)_p1 trnL(tag)-trnN(gtt) 1 AGCGTGTCTACCAATTCCAC CCCCAGGAAGGATTTGAACC 20 20 50.0 55.0 57.9 58.1 0.0 0.0 0.242130 107032 107200 268-274 1.000000 85.7 trnL(tag)-trnN(gtt)_p2 trnL(tag)-trnN(gtt) 2 AGCGTGTCTACCAATTCCAC AACCTCCCCAGGAAGGATTT 20 20 50.0 50.0 57.9 58.2 0.0 13.5 0.321221 107032 107200 273-279 1.000000 85.0 trnL(tag)-trnN(gtt)_p3 trnL(tag)-trnN(gtt) 3 CTACCAATTCCACCACGTCC CCCCAGGAAGGATTTGAACC 20 20 55.0 55.0 58.3 58.1 0.0 0.0 0.413205 107032 107200 261-267 1.000000 84.6 trnL(tag)-trnN(gtt)_p4 trnL(tag)-trnN(gtt) 4 AATATGCGGACGGAGAGACT CCCCAGGAAGGATTTGAACC 20 20 50.0 55.0 58.3 58.1 0.0 0.0 0.453741 107032 107200 326-332 1.000000 82.7 trnL(tag)-trnN(gtt)_p5 trnL(tag)-trnN(gtt) 5 ATATGCGGACGGAGAGACTT CCCCAGGAAGGATTTGAACC 20 20 50.0 55.0 58.3 58.1 0.0 0.0 0.453741 107032 107200 325-331 1.000000 82.7 ccdA_p1 ccdA 1 AGCGTGTCTACCAATTCCAC AAGCCTGGTAATTGACGAGA 20 20 50.0 45.0 57.9 56.6 0.0 0.0 1.538133 107310 108050 1408-1414 1.000000 73.9 ccdA_p2 ccdA 2 AGCGTGTCTACCAATTCCAC AGCCTGGTAATTGACGAGAA 20 20 50.0 45.0 57.9 56.6 0.0 0.0 1.538133 107310 108050 1407-1413 1.000000 73.9 ccdA_p3 ccdA 3 GGTTCAAATCCTTCCTGGGG AAGCCTGGTAATTGACGAGA 20 20 55.0 45.0 58.1 56.6 0.0 0.0 1.590738 107310 108050 1160-1160 1.000000 73.0 ccdA_p4 ccdA 4 GGTTCAAATCCTTCCTGGGG AGCCTGGTAATTGACGAGAA 20 20 55.0 45.0 58.1 56.6 0.0 0.0 1.590738 107310 108050 1159-1159 1.000000 73.0 ccdA_p5 ccdA 5 AAATCCTTCCTGGGGAGGTT AGCCTGGTAATTGACGAGAA 20 20 50.0 45.0 58.2 56.6 13.3 0.0 1.669830 107310 108050 1154-1154 1.000000 72.4 ycf27-psbD_p1 ycf27-psbD 1 TGATGCCCAAGTTAGATGGC GATTCCTACAAGCCGAGCAA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.081313 117931 118377 1415-1415 0.500000 59.3 ycf27-psbD_p2 ycf27-psbD 2 AACTCACTGTATCCGCACAC GATTCCTACAAGCCGAGCAA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.104462 117931 118377 1214-1214 0.500000 59.2 ycf27-psbD_p3 ycf27-psbD 3 TGATGCCCAAGTTAGATGGC AGCGCATAAAAGAGCTCCTC 20 20 50.0 50.0 57.9 58.1 0.0 11.5 0.110392 117931 118377 1637-1637 0.500000 59.1 ycf27-psbD_p4 ycf27-psbD 4 TGATGCCCAAGTTAGATGGC GGTCTGATTCCTACAAGCCG 20 20 50.0 55.0 57.9 58.1 0.0 0.0 0.115812 117931 118377 1420-1420 0.500000 59.1 ycf27-psbD_p5 ycf27-psbD 5 AACTCACTGTATCCGCACAC AGCGCATAAAAGAGCTCCTC 20 20 50.0 50.0 57.9 58.1 0.0 11.5 0.133541 117931 118377 1436-1436 0.500000 58.9 trnQ(ttg)-psb28_p1 trnQ(ttg)-psb28 1 TTTGACTCCGCCATTCGTAG CCTTTAATGAATTGAATACTCGCCA 20 25 50.0 36.0 58.0 58.0 0.0 0.0 5.031213 126500 126778 349-534 1.000000 46.2 trnQ(ttg)-psb28_p2 trnQ(ttg)-psb28 2 TTTGACTCCGCCATTCGTAG AATGAATTGAATACTCGCCA 20 20 50.0 35.0 58.0 53.0 0.0 0.0 5.048317 126500 126778 344-529 1.000000 46.2 trnQ(ttg)-psb28_p3 trnQ(ttg)-psb28 3 CTTTGACTCCGCCATTCGTA CCTTTAATGAATTGAATACTCGCCA 20 25 50.0 36.0 58.0 58.0 0.0 0.0 5.031213 126500 126778 350-535 1.000000 46.1 trnQ(ttg)-psb28_p4 trnQ(ttg)-psb28 4 CTTTGACTCCGCCATTCGTA ACCTTTAATGAATTGAATACTCGCC 20 25 50.0 36.0 58.0 58.0 0.0 0.0 5.032360 126500 126778 351-536 1.000000 46.1 trnQ(ttg)-psb28_p5 trnQ(ttg)-psb28 5 TTTGACTCCGCCATTCGTAG ACCTTTAATGAATTGAATACTCGCC 20 25 50.0 36.0 58.0 58.0 0.0 0.0 5.032360 126500 126778 350-535 1.000000 46.1 clpC-rpl19_p1 clpC-rpl19 1 TTTCTACCGCAACAAACCCA GGCAAAACCAGCGGATTTAC 20 20 45.0 50.0 57.9 58.0 0.0 1.5 0.063433 141856 142854 1861-1866 1.000000 86.9 clpC-rpl19_p2 clpC-rpl19 2 TTTCTACCGCAACAAACCCA AGGCAAAACCAGCGGATTTA 20 20 45.0 45.0 57.9 58.1 0.0 1.5 0.136360 141856 142854 1862-1867 1.000000 86.3 clpC-rpl19_p3 clpC-rpl19 3 TTTCTACCGCAACAAACCCA TAGGCAAAACCAGCGGATTT 20 20 45.0 45.0 57.9 58.1 0.0 1.5 0.136360 141856 142854 1863-1868 1.000000 86.3 clpC-rpl19_p4 clpC-rpl19 4 TTTCTACCGCAACAAACCCA AACCAGCGGATTTACAGTCC 20 20 45.0 50.0 57.9 57.9 0.0 1.5 0.163657 141856 142854 1856-1861 1.000000 86.1 clpC-rpl19_p5 clpC-rpl19 5 GTGCAGCAATACCTGTTCCT GGCAAAACCAGCGGATTTAC 20 20 50.0 50.0 58.2 58.0 0.0 1.5 0.182816 141856 142854 1768-1773 1.000000 86.0 trnS(gct)-trnD(gtc)_p1 trnS(gct)-trnD(gtc) 1 GCAGCAGATGATGAAGGTCA TGGGTGCATTAGGAGGAAGA 20 20 50.0 50.0 58.0 58.0 1.6 0.0 0.068690 146943 148592 2767-2773 1.000000 91.5 trnS(gct)-trnD(gtc)_p2 trnS(gct)-trnD(gtc) 2 TGCAGCAGATGATGAAGGTC TGGGTGCATTAGGAGGAAGA 20 20 50.0 50.0 58.0 58.0 1.6 0.0 0.068690 146943 148592 2768-2774 1.000000 91.5 trnS(gct)-trnD(gtc)_p3 trnS(gct)-trnD(gtc) 3 GCAGCAGATGATGAAGGTCA GGTGCATTAGGAGGAAGAGC 20 20 50.0 55.0 58.0 58.0 1.6 0.0 0.073688 146943 148592 2765-2771 1.000000 91.4 trnS(gct)-trnD(gtc)_p4 trnS(gct)-trnD(gtc) 4 GCAGCAGATGATGAAGGTCA GTGCATTAGGAGGAAGAGCC 20 20 50.0 55.0 58.0 58.0 1.6 0.0 0.073688 146943 148592 2770-2770 0.500000 59.4 trnS(gct)-trnD(gtc)_p5 trnS(gct)-trnD(gtc) 5 TGCAGCAGATGATGAAGGTC GTGCATTAGGAGGAAGAGCC 20 20 50.0 55.0 58.0 58.0 1.6 0.0 0.073688 146943 148592 2771-2771 0.500000 59.4