primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG CCTCTAGACCTAGCTGCTGT 20 20 55.0 55.0 58.1 57.9 0.0 13.4 0.194818 78 461 451-556 0.666667 70.5 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 GATCCACTTGGCTACATCCG TTCCCTCTAGACCTAGCTGC 20 20 55.0 55.0 58.1 57.9 0.0 0.0 0.203648 78 461 454-559 0.666667 70.4 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 CAATCCACTGCCTTGATCCA CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 57.9 57.9 0.0 13.4 0.199180 78 461 465-570 0.666667 70.3 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 AATCCACTGCCTTGATCCAC CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 57.9 57.9 0.0 13.4 0.200688 78 461 464-569 0.666667 70.3 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 ACAATCCACTGCCTTGATCC CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 57.9 57.9 0.0 13.4 0.200688 78 461 466-571 0.666667 70.3 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 CCGATGGTATGGACGAATCC AAAAAGGCGCTCAACCTACA 20 20 55.0 45.0 57.9 58.0 0.0 7.6 0.104626 4356 5186 1021-1024 1.000000 82.5 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 CGATGGTATGGACGAATCCC AAAAAGGCGCTCAACCTACA 20 20 55.0 45.0 57.9 58.0 0.0 7.6 0.104626 4356 5186 1020-1023 1.000000 82.5 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 CCGCACTTAAAAGCCGAGTA AAAAAGGCGCTCAACCTACA 20 20 50.0 45.0 58.3 58.0 5.3 7.6 0.307146 4356 5186 969-972 1.000000 81.0 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 CGATGGTATGGACGAATCCC CCTTGAAAAAGGCGCTCAAC 20 20 55.0 50.0 57.9 58.2 0.0 7.6 0.309329 4356 5186 1025-1028 1.000000 80.8 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 CGATGGTATGGACGAATCCC CTTGAAAAAGGCGCTCAACC 20 20 55.0 50.0 57.9 58.2 0.0 7.6 0.309329 4356 5186 1024-1027 1.000000 80.8 trnG-GCC-trnR-UCU_p1 trnG-GCC-trnR-UCU 1 AGCCTTCCAAGCTAACGATG AGAAGACCTCTGTCCTATCCA 20 21 50.0 47.6 58.0 56.9 0.0 0.0 2.081443 10251 10953 778-783 1.000000 67.4 trnG-GCC-trnR-UCU_p2 trnG-GCC-trnR-UCU 2 CCTAGCCTTCCAAGCTAACG AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 58.1 56.9 0.0 0.0 2.110280 10251 10953 781-786 1.000000 67.2 trnG-GCC-trnR-UCU_p3 trnG-GCC-trnR-UCU 3 AGCCTTCCAAGCTAACGATG AGGTTTAGAAGACCTCTGTCCT 20 22 50.0 45.5 58.0 57.9 0.0 0.0 2.164771 10251 10953 784-789 1.000000 66.7 trnG-GCC-trnR-UCU_p4 trnG-GCC-trnR-UCU 4 CCTAGCCTTCCAAGCTAACG AGGTTTAGAAGACCTCTGTCCT 20 22 55.0 45.5 58.1 57.9 0.0 0.0 2.193608 10251 10953 787-792 1.000000 66.5 trnG-GCC-trnR-UCU_p5 trnG-GCC-trnR-UCU 5 CCCTAGCCTTCCAAGCTAAC AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 57.7 56.9 0.0 0.0 2.385293 10251 10953 782-787 1.000000 65.0 atpA-atpF_p1 atpA-atpF 1 GTCGCCTACTTGAAGTACGG GCATGTTTGGCGCGATAAAA 20 20 55.0 45.0 58.1 58.4 13.2 12.1 0.471192 12768 12837 206-216 1.000000 80.4 atpA-atpF_p2 atpA-atpF 2 CCGTCGCCTACTTGAAGTAC GCATGTTTGGCGCGATAAAA 20 20 55.0 45.0 58.1 58.4 0.0 12.1 0.471192 12768 12837 208-218 1.000000 80.3 atpA-atpF_p3 atpA-atpF 3 TACTAATCTCGTCGGCTCGA GCATGTTTGGCGCGATAAAA 20 20 50.0 45.0 57.8 58.4 0.0 12.1 0.606317 12768 12837 126-136 1.000000 79.8 atpA-atpF_p4 atpA-atpF 4 GCTCAATACGTTCGCGGATA GCATGTTTGGCGCGATAAAA 20 20 50.0 45.0 58.2 58.4 6.1 12.1 0.614222 12768 12837 150-160 1.000000 79.6 atpA-atpF_p5 atpA-atpF 5 GTCGCCTACTTGAAGTACGG TGTTTGACCAACGAGTTGCA 20 20 55.0 45.0 58.1 58.5 13.2 10.2 0.640350 12768 12837 252-262 1.000000 78.3 petN-psbM_p1 petN-psbM 1 TAGTAAGTCTCGCTTGGGCT TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 58.2 57.6 0.0 0.0 1.558772 29463 30811 1511-1513 1.000000 69.4 petN-psbM_p2 petN-psbM 2 ATGGGGAAGAAGTGGACTCT TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 57.6 57.6 0.0 0.0 1.758286 29463 30811 1450-1452 1.000000 67.9 petN-psbM_p3 petN-psbM 3 TAGTAAGTCTCGCTTGGGCT TGCTACTGCACTGTTCATTC 20 20 50.0 45.0 58.2 56.1 0.0 0.0 2.081320 29463 30811 1511-1513 1.000000 65.3 petN-psbM_p4 petN-psbM 4 ATGGGGAAGAAGTGGACTCT TGCTACTGCACTGTTCATTC 20 20 50.0 45.0 57.6 56.1 0.0 0.0 2.280835 29463 30811 1450-1452 1.000000 63.7 petN-psbM_p5 petN-psbM 5 ATAGTAAGTCTCGCTTGGGC TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 57.1 57.6 0.0 0.0 2.300208 29463 30811 1512-1514 1.000000 63.5 trnD-GUC-trnY-GUA_p1 trnD-GUC-trnY-GUA 1 TTGGATTTTGATCCGTCGGG TGGCAATATGTCTACGCTGG 20 20 50.0 50.0 58.3 57.8 12.3 0.0 0.493710 32180 32643 560-594 1.000000 80.3 trnD-GUC-trnY-GUA_p2 trnD-GUC-trnY-GUA 2 TTGGATTTTGATCCGTCGGG GGCAATATGTCTACGCTGGT 20 20 50.0 50.0 58.3 57.8 12.3 0.0 0.495261 32180 32643 559-593 1.000000 80.3 trnD-GUC-trnY-GUA_p3 trnD-GUC-trnY-GUA 3 TTGGATTTTGATCCGTCGGG GGGGACGGACTGTAAATTCG 20 20 50.0 55.0 58.3 58.4 12.3 0.0 0.606264 32180 32643 581-615 1.000000 79.4 trnD-GUC-trnY-GUA_p4 trnD-GUC-trnY-GUA 4 TTGGATTTTGATCCGTCGGG GGGACGGACTGTAAATTCGT 20 20 50.0 50.0 58.3 57.6 12.3 0.0 0.629941 32180 32643 580-614 1.000000 79.2 trnD-GUC-trnY-GUA_p5 trnD-GUC-trnY-GUA 5 TTGGATTTTGATCCGTCGGG GATTCTTCCTGGGTCGATGC 20 20 50.0 55.0 58.3 58.4 12.3 0.0 0.667221 32180 32643 614-648 1.000000 78.9 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 GCTGCCTCCTTGAAAGAGAG GAACCGATGACTTACGCCTT 20 20 55.0 50.0 58.3 58.0 0.0 0.0 0.269359 32860 33618 862-893 1.000000 79.6 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 TGTCCTGAACCACTAGACGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.287509 32860 33618 841-872 1.000000 79.5 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 GCTGCCTCCTTGAAAGAGAG CCATGGCGTTACTCTACCAC 20 20 55.0 55.0 58.3 58.1 0.0 0.0 0.327456 32860 33618 841-872 1.000000 79.2 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 TGTCCTGAACCACTAGACGA CCATGGCGTTACTCTACCAC 20 20 50.0 55.0 57.7 58.1 0.0 0.0 0.345606 32860 33618 820-851 1.000000 79.1 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 GCTGCCTCCTTGAAAGAGAG TGGCGTTACTCTACCACTGA 20 20 55.0 50.0 58.3 58.1 0.0 0.0 0.349611 32860 33618 838-869 1.000000 79.0 psbZ-trnG-GCC_p1 psbZ-trnG-GCC 1 CTTCTCCTGATGGTTGGTCG CGTCTTCTCCTTGGCAAAGA 20 20 55.0 50.0 58.0 57.8 0.0 1.1 0.185568 38557 39205 796-803 1.000000 82.7 psbZ-trnG-GCC_p2 psbZ-trnG-GCC 2 TCCTGATGGTTGGTCGAGTA CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 57.8 57.8 0.0 1.1 0.395214 38557 39205 792-799 1.000000 81.1 psbZ-trnG-GCC_p3 psbZ-trnG-GCC 3 TTCTCCTGATGGTTGGTCGA CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 58.4 57.8 0.0 1.1 0.530110 38557 39205 795-802 1.000000 80.0 psbZ-trnG-GCC_p4 psbZ-trnG-GCC 4 TCTCCTGATGGTTGGTCGAG CGTCTTCTCCTTGGCAAAGA 20 20 55.0 50.0 58.8 57.8 0.0 1.1 0.983632 38557 39205 794-801 1.000000 76.3 psbZ-trnG-GCC_p5 psbZ-trnG-GCC 5 CTTCTCCTGATGGTTGGTCG GGGAGAAAAGAGGATAGGGGA 20 21 55.0 52.4 58.0 57.9 0.0 0.0 1.077645 38557 39205 868-875 1.000000 75.2 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 CCCTTTGCTAATCGGGGATA AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 56.8 57.8 0.0 0.0 1.441190 53178 54219 1075-1186 1.000000 74.6 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 CTCCGGCCCTTTGCTAATC AGAAGGTCTACGGTTCGAGT 19 20 57.9 50.0 58.3 57.8 0.0 0.0 1.489381 53178 54219 1081-1192 1.000000 74.2 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 TTCTCCGGCCCTTTGCTAAT AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 59.4 57.8 0.0 0.0 1.573560 53178 54219 1083-1194 1.000000 73.6 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 CCCTTTGCTAATCGGGGATAA AGAAGGTCTACGGTTCGAGT 21 20 47.6 50.0 57.5 57.8 0.0 0.0 1.699406 53178 54219 1075-1186 1.000000 72.6 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 CCCTTTGCTAATCGGGGATA GAAGGTCTACGGTTCGAGTC 20 20 50.0 55.0 56.8 57.5 0.0 0.0 1.784962 53178 54219 1074-1185 1.000000 71.9 rbcL-accD_p1 rbcL-accD 1 GAGGCTAGCAAATGGAGTCC AGATCGAATTGAACCACCGT 20 20 55.0 45.0 58.0 57.2 18.2 0.0 0.802119 59497 60303 876-931 1.000000 77.6 rbcL-accD_p2 rbcL-accD 2 GCAGCAGTGGATACTTTGGA AGATCGAATTGAACCACCGT 20 20 50.0 45.0 57.9 57.2 0.0 0.0 0.876396 59497 60303 807-862 1.000000 77.0 rbcL-accD_p3 rbcL-accD 3 TTGAATTCGCAGCAGTGGAT AGATCGAATTGAACCACCGT 20 20 45.0 45.0 58.2 57.2 0.0 0.0 0.937445 59497 60303 815-870 1.000000 76.5 rbcL-accD_p4 rbcL-accD 4 TCGCAGCAGTGGATACTTTG AGATCGAATTGAACCACCGT 20 20 50.0 45.0 58.3 57.2 0.0 0.0 1.036895 59497 60303 809-864 1.000000 75.7 rbcL-accD_p5 rbcL-accD 5 GAGTCCTGAACTAGCTGCTG AGATCGAATTGAACCACCGT 20 20 55.0 45.0 57.7 57.2 13.4 0.0 1.054638 59497 60303 862-917 1.000000 75.6 accD_p1 accD 1 TCTTCCGAGAAGAAATGAAA AAAAATACCTGCTCGCCAGA 20 20 35.0 45.0 52.1 57.5 12.2 4.7 6.350832 60304 62031 1888-1888 0.666667 26.7 accD_p2 accD 2 TCTTCCGAGAAGAAATGAAA AAAATACCTGCTCGCCAGAA 20 20 35.0 45.0 52.1 57.5 12.2 4.7 6.350832 60304 62031 1887-1887 0.666667 26.7 accD_p3 accD 3 TCTTCCGAGAAGAAATGAAA AAATACCTGCTCGCCAGAAA 20 20 35.0 45.0 52.1 57.5 12.2 4.7 6.350832 60304 62031 1886-1886 0.666667 26.7 accD_p4 accD 4 TCTTCCGAGAAGAAATGAAA AATACCTGCTCGCCAGAAAA 20 20 35.0 45.0 52.1 57.5 12.2 4.7 6.350832 60304 62031 1885-1885 0.666667 26.7 accD_p5 accD 5 TCTTCCGAGAAGAAATGAAA ATACCTGCTCGCCAGAAAAA 20 20 35.0 45.0 52.1 57.5 12.2 4.7 6.350832 60304 62031 1884-1884 0.666667 26.7 rpl33-rps18_p1 rpl33-rps18 1 CGACACAATACGCCTAGTCG TCAATTCGATCCCCCGATTG 20 20 55.0 50.0 58.5 57.7 0.0 0.0 0.790741 72159 72578 512-593 1.000000 78.2 rpl33-rps18_p2 rpl33-rps18 2 GACACAATACGCCTAGTCGA TCAATTCGATCCCCCGATTG 20 20 50.0 50.0 57.2 57.7 0.0 0.0 1.092932 72159 72578 511-592 1.000000 75.8 rpl33-rps18_p3 rpl33-rps18 3 TCGACACAATACGCCTAGTC TCAATTCGATCCCCCGATTG 20 20 50.0 50.0 57.2 57.7 0.0 0.0 1.092932 72159 72578 513-594 1.000000 75.8 rpl33-rps18_p4 rpl33-rps18 4 CGACACAATACGCCTAGTCG ATTCGATCCCCCGATTGGAT 20 20 55.0 50.0 58.5 58.6 0.0 0.0 1.173970 72159 72578 509-590 1.000000 75.2 rpl33-rps18_p5 rpl33-rps18 5 AGAATCGACACAATACGCCT TCAATTCGATCCCCCGATTG 20 20 45.0 50.0 57.0 57.7 0.0 0.0 1.216072 72159 72578 517-598 1.000000 74.8 trnL-UAG-ccsA_p1 trnL-UAG-ccsA 1 GTGAAATCGGTAGACACGCT ACAATTGACACGACTGAAAAAGA 20 23 50.0 34.8 58.0 57.2 0.0 13.6 3.819229 120495 120603 238-242 1.000000 52.1 trnL-UAG-ccsA_p2 trnL-UAG-ccsA 2 TGAAATCGGTAGACACGCTG ACAATTGACACGACTGAAAAAGA 20 23 50.0 34.8 58.0 57.2 0.0 13.6 3.820600 120495 120603 237-241 1.000000 52.1 trnL-UAG-ccsA_p3 trnL-UAG-ccsA 3 TAGACACGCTGCTCTTAGGA ACAATTGACACGACTGAAAAAGA 20 23 50.0 34.8 57.9 57.2 0.0 13.6 3.935676 120495 120603 228-232 1.000000 51.3 trnL-UAG-ccsA_p4 trnL-UAG-ccsA 4 GGTAGACACGCTGCTCTTAG ACAATTGACACGACTGAAAAAGA 20 23 55.0 34.8 57.8 57.2 0.0 13.6 4.007694 120495 120603 230-234 1.000000 50.7 trnL-UAG-ccsA_p5 trnL-UAG-ccsA 5 GTAGACACGCTGCTCTTAGG ACAATTGACACGACTGAAAAAGA 20 23 55.0 34.8 57.8 57.2 0.0 13.6 4.007694 120495 120603 229-233 1.000000 50.7 ccsA-ndhD_p1 ccsA-ndhD 1 TTCCGCAATTGTCGCTTCTA GTTGACCGGGTTGAAGCTAT 20 20 45.0 50.0 57.9 57.9 7.4 6.3 0.196926 121573 121843 431-434 1.000000 80.6 ccsA-ndhD_p2 ccsA-ndhD 2 TTCCGCAATTGTCGCTTCTA ATCAGTTGACCGGGTTGAAG 20 20 45.0 50.0 57.9 57.8 7.4 6.3 0.272505 121573 121843 435-438 1.000000 80.0 ccsA-ndhD_p3 ccsA-ndhD 3 CGCAATTGTCGCTTCTATCG GTTGACCGGGTTGAAGCTAT 20 20 50.0 50.0 57.7 57.9 7.4 6.3 0.379627 121573 121843 428-431 1.000000 79.2 ccsA-ndhD_p4 ccsA-ndhD 4 TCCGCAATTGTCGCTTCTAT GTTGACCGGGTTGAAGCTAT 20 20 45.0 50.0 57.7 57.9 7.4 6.3 0.418953 121573 121843 430-433 1.000000 78.9 ccsA-ndhD_p5 ccsA-ndhD 5 CGCAATTGTCGCTTCTATCG ATCAGTTGACCGGGTTGAAG 20 20 50.0 50.0 57.7 57.8 7.4 6.3 0.455206 121573 121843 432-435 1.000000 78.6 ndhG-ndhI_p1 ndhG-ndhI 1 TCCCAACGAAAAGGCAGAAT GTCGTTTACCAATGTCAGTAGT 20 22 45.0 40.9 57.7 56.1 0.0 0.0 4.144548 125079 125517 599-631 1.000000 51.0 ndhG-ndhI_p2 ndhG-ndhI 2 TCCCAACGAAAAGGCAGAAT GTCGTTTACCAATGTCAGTAGTTG 20 24 45.0 41.7 57.7 58.1 0.0 0.0 4.373836 125079 125517 599-631 1.000000 49.1 ndhG-ndhI_p3 ndhG-ndhI 3 TCCCAACGAAAAGGCAGAAT TCGTTTACCAATGTCAGTAGTTGA 20 24 45.0 37.5 57.7 58.2 0.0 0.0 4.441262 125079 125517 598-630 1.000000 48.6 ndhG-ndhI_p4 ndhG-ndhI 4 TCCCAACGAAAAGGCAGAAT CGTTTACCAATGTCAGTAGTTGA 20 23 45.0 39.1 57.7 56.8 0.0 0.0 4.453074 125079 125517 597-629 1.000000 48.5 ndhG-ndhI_p5 ndhG-ndhI 5 TCCCAACGAAAAGGCAGAAT TCGTTTACCAATGTCAGTAGTTG 20 23 45.0 39.1 57.7 56.8 0.0 0.0 4.453074 125079 125517 598-630 1.000000 48.5 ycf1_p1 ycf1 1 TGTCAGTGAATAATTTGTCCAAGC ACCTTTCAAAATCAAAAAGAAATCCA 24 26 37.5 26.9 58.0 57.0 0.0 0.0 11.045820 132736 132855 170-170 1.000000 44.2 ycf1_p2 ycf1 2 TGTCAGTGAATAATTTGTCCAAGC ACAACCTTTCAAAATCAAAAAGA 24 23 37.5 26.1 58.0 53.8 0.0 0.0 11.226818 132736 132855 173-173 1.000000 44.2 ycf1_p3 ycf1 3 TGTCAGTGAATAATTTGTCCAAGC ACAACCTTTCAAAATCAAAAAGAA 24 24 37.5 25.0 58.0 54.6 0.0 0.0 11.454160 132736 132855 173-173 1.000000 44.2 ycf1_p4 ycf1 4 TGTCAGTGAATAATTTGTCCAAGC AACCTTTCAAAATCAAAAAGAAATCCA 24 27 37.5 25.9 58.0 57.5 0.0 0.0 11.472677 132736 132855 171-171 1.000000 44.2 ycf1_p5 ycf1 5 TGTCAGTGAATAATTTGTCCAAGC AACAACCTTTCAAAATCAAAAAGA 24 24 37.5 25.0 58.0 54.6 0.0 0.0 11.454160 132736 132855 174-174 1.000000 44.1