feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score rps18 gene rps18 rps18 54 431 1 378 LSC 0.013228 5 0 300 300 yes 1.000000 2 1.000000 NA 1.000000 61.700000 IGS_001 igs rps18|rpl20 rps18-rpl20 432 653 0 222 LSC 0.000000 0 0 2 300 no 0.000000 1 0.000000 NA 1.000000 18.900000 rpl20 gene rpl20 rpl20 654 1052 -1 399 LSC 0.000000 0 0 224 300 no 0.000000 1 0.000000 NA 1.000000 35.800000 IGS_002 igs rpl20|rps12 rpl20-rps12 1053 1831 0 779 LSC 0.001285 1 1 300 300 no 1.000000 2 1.000000 NA 0.998716 59.600000 rps12_part1 gene rps12 rps12 1832 1945 -1 114 LSC 0.000000 0 0 127 196 no 0.000000 1 0.000000 NA 1.000000 28.300000 IGS_003 igs rps12|clpP rps12-clpP 1946 2039 0 94 LSC 0.000000 0 0 241 102 no 0.000000 1 0.000000 NA 1.000000 26.400000 clpP gene clpP clpP 2040 2170 -1 131 LSC 0.015267 2 0 300 126 no 1.000000 2 1.000000 NA 1.000000 55.700000 IGS_004 igs clpP|psbB clpP-psbB 2171 2761 0 591 LSC 0.001946 1 77 11 300 no 1.000000 2 1.000000 NA 0.869712 48.100000 psbB gene psbB psbB 2762 4288 1 1527 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 39.900000 IGS_005 igs psbB|psbT psbB-psbT 4289 4460 0 172 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbT gene psbT psbT 4461 4568 1 108 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_006 igs psbT|psbN psbT-psbN 4569 4632 0 64 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbN gene psbN psbN 4633 4764 -1 132 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_007 igs psbN|psbH psbN-psbH 4765 4855 0 91 LSC 0.000000 0 0 300 235 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbH gene psbH psbH 4856 5077 1 222 LSC 0.000000 0 0 300 13 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_008 igs psbH|petB psbH-petB 5078 6024 0 947 LSC 0.003171 3 1 300 300 no 1.000000 2 1.000000 NA 0.998944 60.700000 petB gene petB petB 6025 6672 1 648 LSC 0.000000 0 0 300 35 no 0.000000 1 0.000000 NA 1.000000 27.600000 IGS_009 igs petB|petD petB-petD 6673 7652 0 980 LSC 0.005102 5 0 300 300 yes 1.000000 2 1.000000 NA 1.000000 61.700000 petD gene petD petD 7653 8165 1 513 LSC 0.000000 0 0 300 297 no 0.000000 1 0.000000 NA 1.000000 38.200000 IGS_010 igs petD|rpoA petD-rpoA 8166 8294 0 129 LSC 0.000000 0 0 300 168 no 0.000000 1 0.000000 NA 1.000000 31.400000 rpoA gene rpoA rpoA 8295 9323 -1 1029 LSC 0.002915 3 0 300 34 no 1.000000 2 1.000000 NA 1.000000 48.000000 IGS_011 igs rpoA|rps11 rpoA-rps11 9324 9394 0 71 LSC 0.042254 3 0 300 194 yes 1.000000 2 1.000000 NA 1.000000 76.300000 rps11 gene rps11 rps11 9395 9811 -1 417 LSC 0.007194 3 0 19 73 no 1.000000 2 1.000000 NA 1.000000 45.500000 IGS_012 igs rps11|rpl36 rps11-rpl36 9812 9945 0 134 LSC 0.007576 1 2 18 300 no 1.000000 2 1.000000 NA 0.985075 44.600000 rpl36 gene rpl36 rpl36 9946 10017 -1 72 LSC 0.000000 0 0 60 300 no 0.000000 1 0.000000 NA 1.000000 23.200000 infA gene infA infA 9987 10235 -1 249 LSC 0.000000 0 0 101 132 no 0.000000 1 0.000000 NA 1.000000 26.300000 IGS_014 igs infA|rps8 infA-rps8 10236 10340 0 105 LSC 0.000000 0 0 300 27 no 0.000000 1 0.000000 NA 1.000000 20.800000 rps8 gene rps8 rps8 10341 10745 -1 405 LSC 0.004938 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.500000 IGS_015 igs rps8|rpl14 rps8-rpl14 10746 10904 0 159 LSC 0.000000 0 0 48 300 no 0.000000 1 0.000000 NA 1.000000 22.400000 rpl14 gene rpl14 rpl14 10905 11270 -1 366 LSC 0.000000 0 0 207 300 no 0.000000 1 0.000000 NA 1.000000 35.100000 IGS_016 igs rpl14|rpl16 rpl14-rpl16 11271 11412 0 142 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl16 gene rpl16 rpl16 11413 11823 -1 411 LSC 0.000000 0 0 300 215 no 0.000000 1 0.000000 NA 1.000000 36.100000 IGS_017 igs rpl16|rps3 rpl16-rps3 11824 12852 0 1029 LSC 0.004864 5 1 300 300 yes 1.000000 2 1.000000 NA 0.999028 61.600000 rps3 gene rps3 rps3 12853 13539 -1 687 LSC 0.001456 1 0 5 238 no 1.000000 2 1.000000 NA 1.000000 45.000000 IGS_018 igs rps3|rpl22 rps3-rpl22 13540 13540 0 1 LSC 0.000000 0 0 300 237 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl22 gene rpl22 rpl22 13541 14083 -1 543 LSC 0.001842 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.600000 IGS_019 igs rpl22|rps19 rpl22-rps19 14084 14148 0 65 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps19 gene rps19 rps19 14149 14535 -1 387 LSC 0.002584 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.800000 IGS_020 igs rps19|trnQ-UUG rps19-trnQ-UUG 14536 14797 0 262 IRb 0.000000 0 0 74 300 no 0.000000 1 0.000000 NA 1.000000 24.300000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 14798 14869 1 72 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_021 igs trnQ-UUG|rps16 trnQ-UUG-rps16 14870 15137 0 268 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps16 gene rps16 rps16 15138 15191 1 54 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_022 igs rps16|trnK-UUU rps16-trnK-UUU 15192 15830 0 639 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 15831 15867 1 37 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 matK gene matK matK 16563 18095 1 1533 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 39.900000 IGS_025 igs matK|trnK-UUU matK-trnK-UUU 18096 18374 0 279 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 18375 18408 1 34 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_026 igs trnK-UUU|psbA trnK-UUU-psbA 18409 18641 0 233 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbA gene psbA psbA 18642 19703 1 1062 IRb 0.000000 0 0 300 52 no 0.000000 1 0.000000 NA 1.000000 28.900000 IGS_027 igs psbA|trnH-GUG psbA-trnH-GUG 19704 20001 0 298 IRb 0.003356 1 0 300 171 no 1.000000 2 1.000000 NA 1.000000 52.300000 trnH-GUG tRNA trnH-GUG trnH-GUG 20002 20076 1 75 IRb 0.000000 0 0 245 96 no 0.000000 1 0.000000 NA 1.000000 25.900000 IGS_028 igs trnH-GUG|rpl2 trnH-GUG-rpl2 20077 20146 0 70 IRb 0.000000 0 0 300 26 no 0.000000 1 0.000000 NA 1.000000 20.700000 rpl2 gene rpl2 rpl2 20147 20971 -1 825 IRb 0.002424 2 0 300 289 no 1.000000 2 1.000000 NA 1.000000 60.100000 IGS_029 igs rpl2|rpl23 rpl2-rpl23 20972 21034 0 63 IRb 0.000000 0 0 300 226 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 21035 21166 -1 132 IRb 0.000000 0 0 300 94 no 0.000000 1 0.000000 NA 1.000000 25.800000 IGS_030 igs rpl23|trnI-CAU rpl23-trnI-CAU 21167 21329 0 163 IRb 0.006135 1 0 300 168 no 1.000000 2 1.000000 NA 1.000000 53.600000 trnI-CAU tRNA trnI-CAU trnI-CAU 21330 21403 -1 74 IRb 0.000000 0 0 68 94 no 0.000000 1 0.000000 NA 1.000000 23.800000 IGS_031 igs trnI-CAU|ycf2 trnI-CAU-ycf2 21404 21528 0 125 IRb 0.009174 1 16 142 237 no 1.000000 2 1.000000 NA 0.872000 55.900000 ycf2 gene ycf2 ycf2 21529 27636 1 6108 SSC 0.005748 35 19 30 300 no 1.000000 2 1.000000 NA 0.996889 43.400000 IGS_032 igs ycf2|trnL-CAA ycf2-trnL-CAA 27637 27817 0 181 SSC 0.000000 0 14 300 264 no 1.000000 2 1.000000 NA 0.922652 56.600000 trnL-CAA tRNA trnL-CAA trnL-CAA 27818 27898 -1 81 SSC 0.000000 0 0 300 183 no 0.000000 1 0.000000 NA 1.000000 32.500000 IGS_033 igs trnL-CAA|ycf1 trnL-CAA-ycf1 27899 28151 0 253 SSC 0.003953 1 0 300 46 no 1.000000 2 1.000000 NA 1.000000 43.200000 ycf1 gene ycf1 ycf1 28152 33665 1 5514 SSC 0.002004 11 24 69 235 no 1.000000 2 1.000000 NA 0.995647 44.200000 IGS_034 igs ycf1|rps15 ycf1-rps15 33666 33904 0 239 SSC 0.004184 1 0 15 143 no 1.000000 2 1.000000 NA 1.000000 41.000000 rps15 gene rps15 rps15 33905 34171 1 267 SSC 0.003745 1 0 3 57 no 1.000000 2 1.000000 NA 1.000000 39.900000 IGS_035 igs rps15|ndhG rps15-ndhG 34172 34306 0 135 SSC 0.014815 2 0 123 300 no 1.000000 2 1.000000 NA 1.000000 55.200000 ndhG gene ndhG ndhG 34307 34840 1 534 SSC 0.000000 0 4 70 236 no 1.000000 2 1.000000 NA 0.992509 48.400000 IGS_036 igs ndhG|psaC ndhG-psaC 34841 35211 0 371 SSC 0.002703 1 1 300 300 no 1.000000 2 1.000000 NA 0.997305 55.800000 psaC gene psaC psaC 35212 35457 1 246 SSC 0.000000 0 0 134 85 yes 0.000000 1 0.000000 NA 1.000000 25.100000 IGS_037 igs psaC|ndhD psaC-ndhD 35458 35609 0 152 SSC 0.105634 15 10 300 300 yes 1.000000 2 1.000000 NA 0.934211 91.700000 ndhD gene ndhD ndhD 35610 35839 1 230 SSC 0.000000 0 0 46 300 no 0.000000 1 0.000000 NA 1.000000 22.200000 IGS_038 igs ndhD|ccsA ndhD-ccsA 35840 36036 0 197 SSC 0.000000 0 4 276 177 no 1.000000 2 1.000000 NA 0.979695 52.700000 ccsA gene ccsA ccsA 36037 37017 -1 981 SSC 0.003058 3 0 300 300 no 1.000000 2 1.000000 NA 1.000000 60.500000 IGS_039 igs ccsA|trnL-UAG ccsA-trnL-UAG 37018 37122 0 105 SSC 0.000000 0 0 62 300 no 0.000000 1 0.000000 NA 1.000000 23.400000 trnL-UAG tRNA trnL-UAG trnL-UAG 37123 37202 -1 80 SSC 0.000000 0 0 167 300 no 0.000000 1 0.000000 NA 1.000000 31.300000 IGS_040 igs trnL-UAG|rpl32 trnL-UAG-rpl32 37203 38204 0 1002 SSC 0.007984 8 0 247 300 yes 1.000000 2 1.000000 NA 1.000000 63.300000 rpl32 gene rpl32 rpl32 38205 38399 -1 195 SSC 0.000000 0 0 40 150 no 0.000000 1 0.000000 NA 1.000000 21.800000 IGS_041 igs rpl32|ndhF rpl32-ndhF 38400 39003 0 604 SSC 0.011647 7 3 235 120 no 1.000000 2 1.000000 NA 0.995033 59.900000 ndhF gene ndhF ndhF 39004 39349 1 346 SSC 0.002890 1 0 198 114 no 1.000000 2 1.000000 NA 1.000000 48.700000 IGS_042 igs ndhF|trnN-GUU ndhF-trnN-GUU 39350 39749 0 400 SSC 0.007500 3 0 225 80 no 1.000000 2 1.000000 NA 1.000000 49.900000 trnN-GUU tRNA trnN-GUU trnN-GUU 39750 39822 -1 73 SSC 0.000000 0 0 10 7 no 0.000000 1 0.000000 NA 1.000000 19.300000 IGS_043 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 39823 39979 0 157 SSC 0.033784 5 9 83 143 yes 1.000000 2 1.000000 NA 0.942675 67.500000 trnR-ACG tRNA trnR-ACG trnR-ACG 39980 40056 -1 77 SSC 0.000000 0 0 47 66 no 0.000000 1 0.000000 NA 1.000000 22.300000 IGS_044 igs trnR-ACG|rrn5 trnR-ACG-rrn5 40057 40253 0 197 SSC 0.010152 2 0 124 190 no 1.000000 2 1.000000 NA 1.000000 52.600000 rrn5 rRNA rrn5 rrn5 40254 40374 -1 121 SSC 0.000000 0 0 44 69 no 0.000000 1 0.000000 NA 1.000000 22.100000 IGS_045 igs rrn5|rrn4.5 rrn5-rrn4.5 40375 41154 0 780 SSC 0.261069 171 125 165 243 yes 1.000000 2 1.000000 NA 0.839744 92.900000 rrn4.5 rRNA rrn4.5 rrn4.5 41155 41257 -1 103 SSC 0.000000 0 0 109 140 no 0.000000 1 0.000000 NA 1.000000 26.900000 IGS_046 igs rrn4.5|rrn23 rrn4.5-rrn23 41258 41355 0 98 SSC 0.000000 0 0 212 42 no 0.000000 1 0.000000 NA 1.000000 21.900000 rrn23 rRNA rrn23 rrn23 41356 44142 -1 2787 SSC 0.002517 7 6 300 66 no 1.000000 2 1.000000 NA 0.997847 47.700000 IGS_047 igs rrn23|trnA rrn23-trnA 44143 44322 0 180 SSC 0.005556 1 0 300 3 no 1.000000 2 1.000000 NA 1.000000 40.900000 trnA gene trnA trnA 44323 44356 1 34 SSC 0.029412 1 0 113 11 no 1.000000 2 1.000000 NA 1.000000 55.200000 IGS_048 igs trnA|trnI-GAU trnA-trnI-GAU 44357 44504 0 148 SSC 0.013514 2 0 30 5 no 1.000000 2 1.000000 NA 1.000000 45.600000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 44505 44539 -1 35 SSC 0.085714 3 0 68 107 yes 1.000000 2 1.000000 NA 1.000000 75.800000 ycf68 gene ycf68 ycf68 45099 45490 -1 392 SSC 0.000000 0 0 216 172 no 0.000000 1 0.000000 NA 1.000000 33.600000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 45486 45527 -1 42 SSC 0.000000 0 0 300 135 no 0.000000 1 0.000000 NA 1.000000 28.900000 IGS_052 igs trnI-GAU|rrn16 trnI-GAU-rrn16 45528 45762 0 235 SSC 0.004255 1 0 300 93 no 1.000000 2 1.000000 NA 1.000000 46.900000 rrn16 rRNA rrn16 rrn16 45763 47276 -1 1514 SSC 0.003963 6 0 99 300 no 1.000000 2 1.000000 NA 1.000000 53.400000 IGS_053 igs rrn16|trnV-GAC rrn16-trnV-GAC 47277 47517 0 241 SSC 0.000000 0 0 261 79 no 0.000000 1 0.000000 NA 1.000000 24.700000 trnV-GAC tRNA trnV-GAC trnV-GAC 47518 47589 -1 72 SSC 0.000000 0 0 300 7 no 0.000000 1 0.000000 NA 1.000000 19.300000 IGS_054 igs trnV-GAC|rps12 trnV-GAC-rps12 47590 48337 0 748 SSC 0.004011 3 0 300 300 yes 1.000000 2 1.000000 NA 1.000000 61.100000 rps12_part2 gene rps12 rps12 48338 49128 1 791 SSC 0.002528 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 60.200000 IGS_055 igs rps12|rps7 rps12-rps7 49129 49181 0 53 SSC 0.000000 0 0 217 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps7 gene rps7 rps7 49182 49652 1 471 SSC 0.002123 1 0 270 79 no 1.000000 2 1.000000 NA 1.000000 48.200000 IGS_056 igs rps7|ndhB rps7-ndhB 49653 49967 0 315 SSC 0.003175 1 0 145 106 no 1.000000 2 1.000000 NA 1.000000 47.600000 ndhB gene ndhB ndhB 49968 50932 1 965 SSC 0.005181 5 0 235 3 no 1.000000 2 1.000000 NA 1.000000 47.000000 IGS_057 igs ndhB|ycf2 ndhB-ycf2 50933 51210 0 278 SSC 0.053957 15 0 12 26 yes 1.000000 2 1.000000 NA 1.000000 67.600000 ycf2 gene ycf2 ycf2 51211 51474 -1 264 IRa 0.003788 1 0 51 46 no 1.000000 2 1.000000 NA 1.000000 43.100000 IGS_058 igs ycf2|trnI-CAU ycf2-trnI-CAU 51475 51599 0 125 IRa 0.009174 1 16 237 142 no 1.000000 2 1.000000 NA 0.872000 55.900000 trnI-CAU tRNA trnI-CAU trnI-CAU 51600 51673 1 74 IRa 0.000000 0 0 78 68 no 0.000000 1 0.000000 NA 1.000000 23.800000 IGS_059 igs trnI-CAU|rpl23 trnI-CAU-rpl23 51674 51837 0 164 IRa 0.006098 1 0 152 300 no 1.000000 2 1.000000 NA 1.000000 52.400000 rpl23 gene rpl23 rpl23 51838 51969 1 132 IRa 0.000000 0 0 95 300 no 0.000000 1 0.000000 NA 1.000000 25.900000 IGS_060 igs rpl23|rpl2 rpl23-rpl2 51970 52031 0 62 IRa 0.000000 0 0 227 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl2 gene rpl2 rpl2 52032 52856 1 825 IRa 0.002424 2 0 289 300 no 1.000000 2 1.000000 NA 1.000000 60.100000 IGS_061 igs rpl2|trnH-GUG rpl2-trnH-GUG 52857 52926 0 70 IRa 0.000000 0 0 26 300 no 0.000000 1 0.000000 NA 1.000000 20.700000 trnH-GUG tRNA trnH-GUG trnH-GUG 52927 53001 -1 75 IRa 0.000000 0 0 96 245 no 0.000000 1 0.000000 NA 1.000000 25.900000 IGS_062 igs trnH-GUG|psbA trnH-GUG-psbA 53002 53299 0 298 IRa 0.003356 1 0 171 300 no 1.000000 2 1.000000 NA 1.000000 52.300000 psbA gene psbA psbA 53300 54361 -1 1062 IRa 0.000000 0 0 52 300 no 0.000000 1 0.000000 NA 1.000000 28.900000 IGS_063 igs psbA|trnK-UUU psbA-trnK-UUU 54362 54594 0 233 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 54595 54628 -1 34 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 matK gene matK matK 54908 56440 -1 1533 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 39.900000 IGS_066 igs matK|trnK-UUU matK-trnK-UUU 56441 57135 0 695 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 57136 57172 -1 37 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_067 igs trnK-UUU|rps16 trnK-UUU-rps16 57173 57811 0 639 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 rps16 gene rps16 rps16 57812 57865 -1 54 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_068 igs rps16|trnQ-UUG rps16-trnQ-UUG 57866 58133 0 268 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 58134 58205 -1 72 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_069 igs trnQ-UUG|psbK trnQ-UUG-psbK 58206 58561 0 356 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.900000 psbK gene psbK psbK 58562 58741 1 180 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_070 igs psbK|psbI psbK-psbI 58742 59192 0 451 LSC 0.003289 1 147 300 161 no 1.000000 2 1.000000 NA 0.674058 51.600000 psbI gene psbI psbI 59193 59303 1 111 LSC 0.000000 0 0 94 50 no 0.000000 1 0.000000 NA 1.000000 22.500000 IGS_071 igs psbI|trnS-GCU psbI-trnS-GCU 59304 59452 0 149 LSC 0.013514 2 1 205 102 no 1.000000 2 1.000000 NA 0.993289 53.600000 trnS-GCU tRNA trnS-GCU trnS-GCU 59453 59542 -1 90 LSC 0.000000 0 0 74 12 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_072 igs trnS-GCU|clpP trnS-GCU-clpP 59543 59629 0 87 LSC 0.023529 2 2 164 63 no 1.000000 2 1.000000 NA 0.977011 57.900000 clpP gene clpP clpP 59630 60229 1 600 LSC 0.013333 8 0 38 97 no 1.000000 2 1.000000 NA 1.000000 54.300000 IGS_073 igs clpP|rps12 clpP-rps12 60230 60235 0 6 LSC 0.000000 0 0 63 91 no 0.000000 1 0.000000 NA 1.000000 23.500000 rps12_part1 gene rps12 rps12 60236 60349 1 114 LSC 0.008772 1 0 69 93 no 1.000000 2 1.000000 NA 1.000000 47.700000 IGS_074 igs rps12|trnG-UCC rps12-trnG-UCC 60350 60494 0 145 LSC 0.006897 1 0 22 300 no 1.000000 2 1.000000 NA 1.000000 43.100000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 60495 60517 1 23 LSC 0.000000 0 0 51 300 no 0.000000 1 0.000000 NA 1.000000 22.600000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 61204 61251 1 48 LSC 0.000000 0 0 300 0 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_077 igs trnG-UCC|trnR-UCU trnG-UCC-trnR-UCU 61252 61393 0 142 LSC 0.007042 1 0 300 137 no 1.000000 2 1.000000 NA 1.000000 51.800000 trnR-UCU tRNA trnR-UCU trnR-UCU 61394 61465 1 72 LSC 0.000000 0 0 141 65 no 0.000000 1 0.000000 NA 1.000000 23.600000 IGS_078 igs trnR-UCU|atpA trnR-UCU-atpA 61466 61571 0 106 LSC 0.009434 1 0 213 300 no 1.000000 2 1.000000 NA 1.000000 57.900000 atpA gene atpA atpA 61572 63095 -1 1524 LSC 0.001312 2 0 40 300 no 1.000000 2 1.000000 NA 1.000000 47.500000 IGS_079 igs atpA|atpF atpA-atpF 63096 63167 0 72 LSC 0.000000 0 5 42 300 no 1.000000 2 1.000000 NA 0.930556 44.900000 atpF gene atpF atpF 63168 64468 -1 1301 LSC 0.000000 0 2 114 61 no 1.000000 2 1.000000 NA 0.998463 48.500000 IGS_080 igs atpF|atpH atpF-atpH 64469 64888 0 420 LSC 0.007143 3 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.100000 atpH gene atpH atpH 64889 65134 -1 246 LSC 0.000000 0 0 250 83 no 0.000000 1 0.000000 NA 1.000000 25.000000 IGS_081 igs atpH|atpI atpH-atpI 65135 65624 0 490 LSC 0.008163 4 0 300 300 yes 1.000000 2 1.000000 NA 1.000000 61.200000 atpI gene atpI atpI 65625 66368 -1 744 LSC 0.000000 0 0 300 165 no 0.000000 1 0.000000 NA 1.000000 37.400000 IGS_082 igs atpI|rps2 atpI-rps2 66369 66549 0 181 LSC 0.005525 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.700000 rps2 gene rps2 rps2 66550 67287 -1 738 LSC 0.000000 0 3 15 300 no 1.000000 2 1.000000 NA 0.995935 45.300000 IGS_083 igs rps2|rpoC2 rps2-rpoC2 67288 67570 0 283 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpoC2 gene rpoC2 rpoC2 67571 71587 -1 4017 LSC 0.002240 9 0 300 16 no 1.000000 2 1.000000 NA 1.000000 41.500000 IGS_084 igs rpoC2|rpoC1 rpoC2-rpoC1 71588 71767 0 180 LSC 0.005556 1 0 114 300 no 1.000000 2 1.000000 NA 1.000000 49.200000 rpoC1 gene rpoC1 rpoC1 71768 73810 -1 2043 LSC 0.000000 0 1237 163 300 no 1.000000 2 1.000000 NA 0.394518 47.300000 IGS_085 igs rpoC1|rpoB rpoC1-rpoB 73811 73839 0 29 LSC NA 0 29 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 rpoB gene rpoB rpoB 73840 77046 -1 3207 LSC NA 0 3207 300 300 no 1.000000 2 1.000000 NA 0.000000 42.800000 IGS_086 igs rpoB|trnC-GCA rpoB-trnC-GCA 77047 78175 0 1129 LSC NA 0 1129 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 trnC-GCA tRNA trnC-GCA trnC-GCA 78176 78251 1 76 LSC NA 0 76 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_087 igs trnC-GCA|petN trnC-GCA-petN 78252 78856 0 605 LSC NA 0 605 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 petN gene petN petN 78857 78946 1 90 LSC NA 0 90 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_088 igs petN|psbM petN-psbM 78947 79708 0 762 LSC NA 0 762 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 psbM gene psbM psbM 79709 79840 -1 132 LSC NA 0 132 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_089 igs psbM|trnE-UUC psbM-trnE-UUC 79841 80617 0 777 LSC NA 0 777 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 trnE-UUC tRNA trnE-UUC trnE-UUC 80618 80690 1 73 LSC NA 0 73 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_090 igs trnE-UUC|trnY-GUA trnE-UUC-trnY-GUA 80691 80754 0 64 LSC NA 0 64 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnY-GUA tRNA trnY-GUA trnY-GUA 80755 80838 1 84 LSC NA 0 84 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_091 igs trnY-GUA|trnD-GUC trnY-GUA-trnD-GUC 80839 81107 0 269 LSC NA 0 269 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnD-GUC tRNA trnD-GUC trnD-GUC 81108 81181 1 74 LSC NA 0 74 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_092 igs trnD-GUC|trnT-GGU trnD-GUC-trnT-GGU 81182 81414 0 233 LSC NA 0 233 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnT-GGU tRNA trnT-GGU trnT-GGU 81415 81486 1 72 LSC NA 0 72 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_093 igs trnT-GGU|psbD trnT-GGU-psbD 81487 82071 0 585 LSC NA 0 585 300 300 no 1.000000 2 1.000000 NA 0.000000 45.900000 psbD gene psbD psbD 82072 83133 1 1062 LSC NA 0 1062 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 psbC gene psbC psbC 83081 84502 1 1422 LSC NA 0 1422 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 IGS_095 igs psbC|trnS-UGA psbC-trnS-UGA 84503 84751 0 249 LSC NA 0 249 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnS-UGA tRNA trnS-UGA trnS-UGA 84752 84839 -1 88 LSC NA 0 88 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_096 igs trnS-UGA|psbZ trnS-UGA-psbZ 84840 85206 0 367 LSC NA 0 367 300 300 no 1.000000 2 1.000000 NA 0.000000 41.400000 psbZ gene psbZ psbZ 85207 85395 1 189 LSC NA 0 189 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_097 igs psbZ|trnG-GCC psbZ-trnG-GCC 85396 85803 0 408 LSC NA 0 408 300 300 no 1.000000 2 1.000000 NA 0.000000 42.200000 trnG-GCC tRNA trnG-GCC trnG-GCC 85804 85874 1 71 LSC NA 0 71 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_098 igs trnG-GCC|trnfM-CAU trnG-GCC-trnfM-CAU 85875 86082 0 208 LSC NA 0 208 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 86083 86154 -1 72 LSC NA 0 72 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_099 igs trnfM-CAU|rps14 trnfM-CAU-rps14 86155 86306 0 152 LSC NA 0 152 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 rps14 gene rps14 rps14 86307 86609 -1 303 LSC NA 0 303 300 300 no 1.000000 2 1.000000 NA 0.000000 40.100000 IGS_100 igs rps14|accD rps14-accD 86610 87119 0 510 LSC NA 0 510 300 300 no 1.000000 2 1.000000 NA 0.000000 44.400000 accD gene accD accD 87120 89044 -1 1925 LSC NA 0 1925 300 300 no 1.000000 2 1.000000 NA 0.000000 45.400000 IGS_101 igs accD|trnM-CAU accD-trnM-CAU 89045 91482 0 2438 LSC NA 0 2438 300 300 no 1.000000 2 1.000000 NA 0.000000 44.300000 trnM-CAU tRNA trnM-CAU trnM-CAU 91483 91554 1 72 LSC NA 0 72 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_102 igs trnM-CAU|atpE trnM-CAU-atpE 91555 91791 0 237 LSC NA 0 237 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 atpE gene atpE atpE 91792 92202 -1 411 LSC NA 0 411 300 300 no 1.000000 2 1.000000 NA 0.000000 42.300000 atpB gene atpB atpB 92199 93695 -1 1497 LSC NA 0 1497 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 IGS_104 igs atpB|rbcL atpB-rbcL 93696 94687 0 992 LSC NA 0 992 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 rbcL gene rbcL rbcL 94688 96130 1 1443 LSC NA 0 1443 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 IGS_105 igs rbcL|petA rbcL-petA 96131 96758 0 628 LSC NA 0 628 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 petA gene petA petA 96759 97721 -1 963 LSC NA 0 963 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 IGS_106 igs petA|cemA petA-cemA 97722 97982 0 261 LSC NA 0 261 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 cemA gene cemA cemA 97983 98672 -1 690 LSC NA 0 690 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 IGS_107 igs cemA|ycf4 cemA-ycf4 98673 99142 0 470 LSC NA 0 470 300 300 no 1.000000 2 1.000000 NA 0.000000 43.500000 ycf4 gene ycf4 ycf4 99143 99496 -1 354 LSC NA 0 354 300 300 no 1.000000 2 1.000000 NA 0.000000 41.100000 IGS_108 igs ycf4|psaI ycf4-psaI 99497 100000 0 504 LSC NA 0 504 300 300 no 1.000000 2 1.000000 NA 0.000000 44.200000 psaI gene psaI psaI 100001 100111 -1 111 LSC NA 0 111 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_109 igs psaI|psaB psaI-psaB 100112 100223 0 112 LSC NA 0 112 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 psaB gene psaB psaB 100224 102428 -1 2205 LSC NA 0 2205 300 300 no 1.000000 2 1.000000 NA 0.000000 44.800000 IGS_110 igs psaB|psaA psaB-psaA 102429 102453 0 25 LSC NA 0 25 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 psaA gene psaA psaA 102454 104706 -1 2253 LSC NA 0 2253 300 300 no 1.000000 2 1.000000 NA 0.000000 44.700000 IGS_111 igs psaA|ycf3 psaA-ycf3 104707 105322 0 616 LSC NA 0 616 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 ycf3 gene ycf3 ycf3 105323 107370 -1 2048 LSC NA 0 2048 300 300 no 1.000000 2 1.000000 NA 0.000000 45.100000 IGS_112 igs ycf3|trnS-GGA ycf3-trnS-GGA 107371 108163 0 793 LSC NA 0 793 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 trnS-GGA tRNA trnS-GGA trnS-GGA 108164 108250 1 87 LSC NA 0 87 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_113 igs trnS-GGA|rps4 trnS-GGA-rps4 108251 108604 0 354 LSC NA 0 354 300 300 no 1.000000 2 1.000000 NA 0.000000 41.100000 rps4 gene rps4 rps4 108605 109210 -1 606 LSC NA 0 606 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 IGS_114 igs rps4|trnT-UGU rps4-trnT-UGU 109211 109493 0 283 LSC NA 0 283 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnT-UGU tRNA trnT-UGU trnT-UGU 109494 109566 -1 73 LSC NA 0 73 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_115 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 109567 110121 0 555 LSC NA 0 555 300 300 no 1.000000 2 1.000000 NA 0.000000 45.300000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 110122 110156 1 35 LSC NA 0 35 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 110744 110828 1 85 LSC NA 0 85 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_118 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 110829 111056 0 228 LSC NA 0 228 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnF-GAA tRNA trnF-GAA trnF-GAA 111057 111129 -1 73 LSC NA 0 73 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_119 igs trnF-GAA|psbJ trnF-GAA-psbJ 111130 111809 0 680 LSC NA 0 680 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 psbJ gene psbJ psbJ 111810 111932 -1 123 LSC NA 0 123 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_120 igs psbJ|psbL psbJ-psbL 111933 112075 0 143 LSC NA 0 143 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 psbL gene psbL psbL 112076 112192 -1 117 LSC NA 0 117 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_121 igs psbL|psbF psbL-psbF 112193 112219 0 27 LSC NA 0 27 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 psbF gene psbF psbF 112220 112339 -1 120 LSC NA 0 120 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_122 igs psbF|psbE psbF-psbE 112340 112347 0 8 LSC NA 0 8 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 psbE gene psbE psbE 112348 112599 -1 252 LSC NA 0 252 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_123 igs psbE|petL psbE-petL 112600 113436 0 837 LSC NA 0 837 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 petL gene petL petL 113437 113532 1 96 LSC NA 0 96 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_124 igs petL|petG petL-petG 113533 113703 0 171 LSC NA 0 171 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 petG gene petG petG 113704 113817 1 114 LSC NA 0 114 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_125 igs petG|trnW-CCA petG-trnW-CCA 113818 113956 0 139 LSC NA 0 139 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnW-CCA tRNA trnW-CCA trnW-CCA 113957 114030 -1 74 LSC NA 0 74 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_126 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 114031 114054 0 24 LSC NA 0 24 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnP-UGG tRNA trnP-UGG trnP-UGG 114055 114128 -1 74 LSC NA 0 74 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnP-GGG tRNA trnP-GGG trnP-GGG 114057 114127 -1 71 LSC NA 0 71 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_128 igs trnP-GGG|psaJ trnP-GGG-psaJ 114128 114542 0 415 LSC NA 0 415 300 300 no 1.000000 2 1.000000 NA 0.000000 42.400000 psaJ gene psaJ psaJ 114543 114683 1 141 LSC NA 0 141 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_129 igs psaJ|rpl33 psaJ-rpl33 114684 114816 0 133 LSC NA 0 133 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 rpl33 gene rpl33 rpl33 114817 114867 1 51 LSC NA 0 51 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_130 igs rpl33|rps18 rpl33-rps18 114868 53 0 691 LSC 0.000000 0 638 300 86 no 1.000000 2 1.000000 NA 0.076700 38.700000