primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 TCTACCAACGGTATGGACGA AAAAAGGCGCTCAACCTACA 20 20 50.0 45.0 57.9 58.0 10.6 7.6 0.151611 4419 5009 746-758 1.000000 81.3 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AAAGCCGAGTACTCTACCGT AAAAAGGCGCTCAACCTACA 20 20 50.0 45.0 58.2 58.0 20.3 7.6 0.192760 4419 5009 681-693 1.000000 81.3 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 AAGCCGAGTACTCTACCGTT AAAAAGGCGCTCAACCTACA 20 20 50.0 45.0 58.2 58.0 20.3 7.6 0.192760 4419 5009 680-692 1.000000 81.3 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 TCTAGCCGCACTTAAAAGCC AAAAAGGCGCTCAACCTACA 20 20 50.0 45.0 58.3 58.0 0.0 7.6 0.290178 4419 5009 695-707 1.000000 80.4 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 CCGCACTTAAAAGCCGAGTA AAAAAGGCGCTCAACCTACA 20 20 50.0 45.0 58.3 58.0 5.3 7.6 0.307146 4419 5009 690-702 1.000000 80.3 trnS-GCU-trnR-UCU_p1 trnS-GCU-trnR-UCU 1 ATTAGCAATCCGCCGCTTTA GATGGGAAAATTTGCGTCCA 20 20 45.0 45.0 58.0 57.0 0.0 9.1 1.066296 8033 9743 1807-1835 1.000000 73.0 trnS-GCU-trnR-UCU_p2 trnS-GCU-trnR-UCU 2 ACGGAAAGAGAGGGATTCGA GATGGGAAAATTTGCGTCCA 20 20 50.0 45.0 58.2 57.0 0.0 9.1 1.179437 8033 9743 1856-1884 1.000000 72.0 trnS-GCU-trnR-UCU_p3 trnS-GCU-trnR-UCU 3 ATTAGCAATCCGCCGCTTTA GATGGGAAAATTTGCGTCCAA 20 21 45.0 42.9 58.0 57.7 0.0 9.1 1.349692 8033 9743 1807-1835 1.000000 70.7 trnS-GCU-trnR-UCU_p4 trnS-GCU-trnR-UCU 4 ATTAGCAATCCGCCGCTTTA AGATGGGAAAATTTGCGTCC 20 20 45.0 45.0 58.0 56.7 0.0 0.0 1.364130 8033 9743 1808-1836 1.000000 70.6 trnS-GCU-trnR-UCU_p5 trnS-GCU-trnR-UCU 5 GCTTTAGTCCACTCAGCCAT GATGGGAAAATTTGCGTCCA 20 20 50.0 45.0 57.6 57.0 0.9 9.1 1.438038 8033 9743 1793-1821 1.000000 70.0 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 CGTCAAGCCCTGATCAATGA CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.110548 26463 27664 1357-1367 1.000000 79.9 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 CGTCAAGCCCTGATCAATGA TGGGGAAAAAGGGATTTGCA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.137649 26463 27664 1345-1355 1.000000 79.7 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 CGTCAAGCCCTGATCAATGA TTATTGATCAGGCGACACCC 20 20 50.0 50.0 58.0 57.7 0.0 0.0 0.354003 26463 27664 1375-1385 1.000000 78.0 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 AAAGTTCTTCCGTCAAGCCC CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 58.4 58.1 0.0 0.0 0.476375 26463 27664 1367-1377 1.000000 77.0 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 AAAGTTCTTCCGTCAAGCCC TGGGGAAAAAGGGATTTGCA 20 20 50.0 45.0 58.4 57.9 0.0 0.0 0.503477 26463 27664 1355-1365 1.000000 76.8 petN-psbM_p1 petN-psbM 1 TCTTGCTTGGGCTGCTTTAA TGCTACTGCATTGTTCATTCT 20 21 45.0 38.1 58.0 55.9 0.0 0.0 3.137832 28697 29347 804-806 1.000000 55.7 petN-psbM_p2 petN-psbM 2 AGTAAGTCTTGCTTGGGCTG TGCTACTGCATTGTTCATTCT 20 21 50.0 38.1 57.8 55.9 0.0 0.0 3.322916 28697 29347 810-812 1.000000 54.2 petN-psbM_p3 petN-psbM 3 ATGGGGAAGAAGTGGACTCT TGCTACTGCATTGTTCATTCT 20 21 50.0 38.1 57.6 55.9 0.0 0.0 3.482651 28697 29347 750-752 1.000000 53.0 petN-psbM_p4 petN-psbM 4 TCTTGCTTGGGCTGCTTTAA TGCTACTGCATTGTTCATTC 20 20 45.0 40.0 58.0 54.3 0.0 0.0 3.717181 28697 29347 804-806 1.000000 51.1 petN-psbM_p5 petN-psbM 5 TTGCTTGGGCTGCTTTAATG TGCTACTGCATTGTTCATTCT 20 21 45.0 38.1 57.3 55.9 0.0 0.0 3.879185 28697 29347 802-804 1.000000 49.8 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 47343 48103 795-820 1.000000 82.6 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 47343 48103 803-828 1.000000 82.0 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 47343 48103 827-852 1.000000 81.6 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 47343 48103 835-860 1.000000 81.0 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG ATCCAATCAAGTCCGTAGCG 20 20 55.0 50.0 57.9 57.8 0.0 0.0 0.357808 47343 48103 818-843 1.000000 80.7 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 CGGTCCTTCACTAATTGGGG AGAAGGTCTACGGTTCGAGT 20 20 55.0 50.0 58.0 57.8 0.0 0.0 0.235670 51572 53147 1685-1723 1.000000 80.9 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 CCGGTCCTTCACTAATTGGG AGAAGGTCTACGGTTCGAGT 20 20 55.0 50.0 58.0 57.8 0.0 0.0 0.235670 51572 53147 1686-1724 1.000000 80.8 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 CCTTCACTAATTGGGGCCAA AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 57.8 57.8 4.4 0.0 0.427413 51572 53147 1681-1719 1.000000 79.3 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 GGTCCTTCACTAATTGGGGC AGAAGGTCTACGGTTCGAGT 20 20 55.0 50.0 58.2 57.8 0.0 0.0 0.433315 51572 53147 1684-1722 1.000000 79.3 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 GTCCTTCACTAATTGGGGCC AGAAGGTCTACGGTTCGAGT 20 20 55.0 50.0 58.2 57.8 0.0 0.0 0.433315 51572 53147 1683-1721 1.000000 79.3 accD_p1 accD 1 CGGGATTGGGATTGGGAAAT CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 57.9 58.0 0.0 26.9 0.113614 59269 60765 2483-2668 1.000000 84.7 accD_p2 accD 2 TTCGTTCAAATAGGGGGCAG CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 57.9 58.0 0.0 26.9 0.149787 59269 60765 2023-2142 1.000000 84.5 accD_p3 accD 3 TGGACCCCTCCAATGTACTT CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 57.9 58.0 0.0 26.9 0.080750 59269 60765 2582-2582 0.166667 46.0 accD_p4 accD 4 TGGACCCCTCCAATGTACTT AAGAAGCCATTGCAATTGCC 20 20 50.0 45.0 57.9 57.9 0.0 26.8 0.157284 59269 60765 2588-2588 0.166667 45.4 accD_p5 accD 5 TGGACCCCTCCAATGTACTT GCATAACAGCGCTTTCACAG 20 20 50.0 50.0 57.9 58.1 0.0 7.5 0.166427 59269 60765 2751-2751 0.166667 45.3 rps12-clpP_p1 rps12-clpP 1 GTACATGTTCCTCGACGCTG ACTTTTATGGACGCAAGCGA 20 20 55.0 45.0 58.7 58.2 2.3 22.3 0.927500 70629 71117 691-698 1.000000 75.1 rps12-clpP_p2 rps12-clpP 2 AGTACATGTTCCTCGACGCT ACTTTTATGGACGCAAGCGA 20 20 50.0 45.0 58.8 58.2 2.3 22.3 1.021883 70629 71117 692-699 1.000000 74.4 rps12-clpP_p3 rps12-clpP 3 TACATGTTCCTCGACGCTGA ACTTTTATGGACGCAAGCGA 20 20 50.0 45.0 58.8 58.2 2.3 22.3 1.026224 70629 71117 690-697 1.000000 74.3 rps12-clpP_p4 rps12-clpP 4 TAGTACATGTTCCTCGACGC ACTTTTATGGACGCAAGCGA 20 20 50.0 45.0 57.2 58.2 2.3 22.3 1.035052 70629 71117 693-700 1.000000 74.2 rps12-clpP_p5 rps12-clpP 5 AAGAGCGGGGGATTTTGTG ACTTTTATGGACGCAAGCGA 19 20 52.6 45.0 58.0 58.2 0.0 22.3 1.235242 70629 71117 659-666 1.000000 72.8 trnI-CAU-ycf2_p1 trnI-CAU-ycf2 1 GTTGGGCGCTTTAACCATTC ATAGACGTCGTTTTGCCCTG 20 20 50.0 50.0 58.0 58.3 7.6 10.5 0.287189 87420 87749 347-498 1.000000 84.1 trnI-CAU-ycf2_p2 trnI-CAU-ycf2 2 AGTTGGGCGCTTTAACCATT ATAGACGTCGTTTTGCCCTG 20 20 45.0 50.0 58.4 58.3 7.6 10.5 0.650125 87420 87749 348-499 1.000000 81.1 trnI-CAU-ycf2_p3 trnI-CAU-ycf2 3 TTGGGCGCTTTAACCATTCA ATAGACGTCGTTTTGCCCTG 20 20 45.0 50.0 58.4 58.3 7.6 10.5 0.655996 87420 87749 346-497 1.000000 81.1 trnI-CAU-ycf2_p4 trnI-CAU-ycf2 4 CCAATTATGAGTTGGGCGCT ATAGACGTCGTTTTGCCCTG 20 20 50.0 50.0 58.6 58.3 7.6 10.5 0.885399 87420 87749 357-508 1.000000 79.2 trnI-CAU-ycf2_p5 trnI-CAU-ycf2 5 GAGTTGGGCGCTTTAACCAT ATAGACGTCGTTTTGCCCTG 20 20 50.0 50.0 58.8 58.3 7.6 10.5 1.104076 87420 87749 349-500 1.000000 77.5 ycf1_p1 ycf1 1 CTTCATAGTGGCTCCGTTCC TTCCCAGTACCCCCATGAAT 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.064276 109342 110676 2619-2700 1.000000 80.8 ycf1_p2 ycf1 2 TCGTAACTCCCGGAACTTCT TTCCCAGTACCCCCATGAAT 20 20 50.0 50.0 58.1 58.0 0.7 0.0 0.090460 109342 110676 2637-2718 1.000000 80.6 ycf1_p3 ycf1 3 CAATTCCCGTTCTCAACCCA TTCCCAGTACCCCCATGAAT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.101314 109342 110676 2683-2764 1.000000 80.5 ycf1_p4 ycf1 4 CTTCATAGTGGCTCCGTTCC ACTGCAGTCGATCTTCAACC 20 20 55.0 50.0 58.1 57.9 0.0 15.2 0.144729 109342 110676 1938-2008 1.000000 80.4 ycf1_p5 ycf1 5 ATTCCCGTTCTCAACCCATG TTCCCAGTACCCCCATGAAT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.134372 109342 110676 2681-2762 1.000000 80.2 ycf1-ndhF_p1 ycf1-ndhF 1 GCATCCACGTACAATCCACA TTCCCAGTACCCCCATGAAT 20 20 50.0 50.0 58.3 58.0 0.0 0.0 0.272661 110677 110783 875-889 1.000000 79.7 ycf1-ndhF_p2 ycf1-ndhF 2 CGAAATTACTCTGCGGTGGA TTCCCAGTACCCCCATGAAT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.010184 110677 110783 823-823 0.333333 53.3 ycf1-ndhF_p3 ycf1-ndhF 3 CGAAATTACTCTGCGGTGGA TTTCCCAGTACCCCCATGAA 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.242872 110677 110783 824-824 0.333333 51.5 ycf1-ndhF_p4 ycf1-ndhF 4 CGAAATTACTCTGCGGTGGA AAATATATAGGGCGCGGACG 20 20 50.0 50.0 58.0 57.7 0.0 8.8 0.293543 110677 110783 288-288 0.333333 51.3 ycf1-ndhF_p5 ycf1-ndhF 5 CGAAATTACTCTGCGGTGGA AAAAGCTTTCCCAGTACCCC 20 20 50.0 50.0 58.0 57.7 0.0 13.1 0.308804 110677 110783 830-830 0.333333 51.0 ccsA_p1 ccsA 1 TGGCTCTTTCAATCTCGACG CGGTTTTGTTGCGGAATTGA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.130622 114775 115740 1760-1761 1.000000 79.9 ccsA_p2 ccsA 2 GTGAAATCGGTAGACACGCT CGGTTTTGTTGCGGAATTGA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.134744 114775 115740 1696-1697 1.000000 79.9 ccsA_p3 ccsA 3 TGAAATCGGTAGACACGCTG CGGTTTTGTTGCGGAATTGA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.136114 114775 115740 1695-1696 1.000000 79.9 ccsA_p4 ccsA 4 TGGCTCTTTCAATCTCGACG CTTCTCTTGCATTGCCAGGA 20 20 50.0 50.0 58.0 58.2 0.0 9.6 0.173429 114775 115740 1785-1786 1.000000 79.6 ccsA_p5 ccsA 5 GTGAAATCGGTAGACACGCT CTTCTCTTGCATTGCCAGGA 20 20 50.0 50.0 58.0 58.2 0.0 9.6 0.177551 114775 115740 1721-1722 1.000000 79.6 ccsA-ndhD_p1 ccsA-ndhD 1 TGCAATTGTAGCTTCTATGGGA TGCACTATCAGTTGACAAGGT 22 21 40.9 42.9 57.5 57.2 7.4 0.0 4.271844 115741 115976 403-404 1.000000 49.6 ccsA-ndhD_p2 ccsA-ndhD 2 TGCAATTGTAGCTTCTATGGGA TCCGGATTTTGTTTTTGCACT 22 21 40.9 38.1 57.5 57.2 7.4 0.0 4.312416 115741 115976 418-419 1.000000 49.1 ccsA-ndhD_p3 ccsA-ndhD 3 TGCAATTGTAGCTTCTATGGGA CGATCTGTATCCTTCTACCCG 22 21 40.9 52.4 57.5 57.2 7.4 0.0 4.335651 115741 115976 458-459 1.000000 48.6 ccsA-ndhD_p4 ccsA-ndhD 4 TGCAATTGTAGCTTCTATGGGA TTGCACTATCAGTTGACAAGGT 22 22 40.9 40.9 57.5 57.9 7.4 0.0 4.587463 115741 115976 404-405 1.000000 47.1 ccsA-ndhD_p5 ccsA-ndhD 5 CTGCAATTGTAGCTTCTATGGG TGCACTATCAGTTGACAAGGT 22 21 45.5 42.9 57.2 57.2 10.7 0.0 4.595284 115741 115976 404-405 1.000000 47.0 ndhG-ndhI_p1 ndhG-ndhI 1 AATCATGTATTGGCGCAGGT TCAAATTGCTTTGGGTCGGT 20 20 45.0 45.0 57.9 58.3 10.8 0.0 0.358631 119236 119707 590-605 1.000000 79.3 ndhG-ndhI_p2 ndhG-ndhI 2 ATTGGCGCAGGTAAATCCAT TCAAATTGCTTTGGGTCGGT 20 20 45.0 45.0 57.9 58.3 10.8 0.0 0.373272 119236 119707 582-597 1.000000 79.2 ndhG-ndhI_p3 ndhG-ndhI 3 CGCCGACTATAAGACCCAAC TCAAATTGCTTTGGGTCGGT 20 20 55.0 45.0 58.2 58.3 0.0 0.0 0.452398 119236 119707 629-644 1.000000 78.4 ndhG-ndhI_p4 ndhG-ndhI 4 ACTCCTAAACCGCCGACTAT TCAAATTGCTTTGGGTCGGT 20 20 50.0 45.0 58.2 58.3 0.0 0.0 0.528658 119236 119707 639-654 1.000000 77.8 ndhG-ndhI_p5 ndhG-ndhI 5 GCCGACTATAAGACCCAACC TCAAATTGCTTTGGGTCGGT 20 20 55.0 45.0 57.8 58.3 0.0 0.0 0.537339 119236 119707 628-643 1.000000 77.7 ycf15-trnI-CAU_p1 ycf15-trnI-CAU 1 GATTGCTTGTTGAACCCTGC TGGGGATTAGCATATATTTCAAGT 20 24 50.0 33.3 57.9 55.7 0.0 0.0 6.385665 151656 151775 512-663 1.000000 45.4 ycf15-trnI-CAU_p2 ycf15-trnI-CAU 2 TAGGAAGAAGCCCCCTCAAA TGGGGATTAGCATATATTTCAAGT 20 24 50.0 33.3 57.9 55.7 0.0 0.0 6.369151 151656 151775 626-777 1.000000 45.2 ycf15-trnI-CAU_p3 ycf15-trnI-CAU 3 GGTATAGGAAGAAGCCCCCT TGGGGATTAGCATATATTTCAAGT 20 24 55.0 33.3 57.9 55.7 0.0 0.0 6.435343 151656 151775 630-781 1.000000 45.2 ycf15-trnI-CAU_p4 ycf15-trnI-CAU 4 TCTCAGTAGGAGTCGAACCC TGGGGATTAGCATATATTTCAAGT 20 24 55.0 33.3 57.9 55.7 6.3 0.0 6.441177 151656 151775 908-1059 1.000000 44.8 ycf15-trnI-CAU_p5 ycf15-trnI-CAU 5 CAGTAGGAGTCGAACCCAGA TGGGGATTAGCATATATTTCAAGT 20 24 55.0 33.3 58.2 55.7 7.0 0.0 6.479909 151656 151775 905-1056 1.000000 44.8 psbB_p1 psbB 1 CCACACCTGTTCATTTGGGA TTATTTGATAAAGGGGTATTTTC 20 23 50.0 26.1 58.0 50.5 0.0 0.0 10.459574 164129 165655 1706-1706 0.833333 33.4 psbB_p2 psbB 2 TCCACACCTGTTCATTTGGG TTATTTGATAAAGGGGTATTTTC 20 23 50.0 26.1 58.0 50.5 0.0 0.0 10.459574 164129 165655 1707-1707 0.833333 33.4 psbB_p3 psbB 3 CCTTAGGCGGTTCTCGAAAA TTATTTGATAAAGGGGTATTTTC 20 23 50.0 26.1 57.9 50.5 0.0 0.0 10.542480 164129 165655 1821-1821 0.833333 33.4 psbB_p4 psbB 4 CCACACCTGTTCATTTGGGA TTTATTTGATAAAGGGGTATTTTC 20 24 50.0 25.0 58.0 51.5 0.0 0.0 10.545406 164129 165655 1707-1707 0.833333 33.4 psbB_p5 psbB 5 TCCACACCTGTTCATTTGGG TTTATTTGATAAAGGGGTATTTTC 20 24 50.0 25.0 58.0 51.5 0.0 0.0 10.545406 164129 165655 1708-1708 0.833333 33.4