primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG GGTGTAGCTGGTGTATTCGG 20 20 55.0 55.0 58.1 58.1 0.0 0.0 0.192987 127 535 866-893 1.000000 84.4 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 CAATCCACTGCCTTGATCCA GGTGTAGCTGGTGTATTCGG 20 20 50.0 55.0 57.9 58.1 0.0 0.0 0.197349 127 535 880-907 1.000000 84.2 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 AATCCACTGCCTTGATCCAC GGTGTAGCTGGTGTATTCGG 20 20 50.0 55.0 57.9 58.1 0.0 0.0 0.198856 127 535 879-906 1.000000 84.2 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 ACAATCCACTGCCTTGATCC GGTGTAGCTGGTGTATTCGG 20 20 50.0 55.0 57.9 58.1 0.0 0.0 0.198856 127 535 881-908 1.000000 84.2 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 GATCCACTTGGCTACATCCG CCTCTAGACCTAGCAGCTGT 20 20 55.0 55.0 58.1 57.9 0.0 16.6 0.194818 127 535 476-476 0.500000 58.4 trnR-UCU-atpA_p1 trnR-UCU-atpA 1 AGCCTTCCAAGCTAACGATG CCTCTACCAAGGCATTCACC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.073961 10021 10288 673-686 1.000000 84.4 trnR-UCU-atpA_p2 trnR-UCU-atpA 2 TTCTGTGAAAGCACCCAGAC CCTCTACCAAGGCATTCACC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.076804 10021 10288 879-892 1.000000 83.3 trnR-UCU-atpA_p3 trnR-UCU-atpA 3 AGCCTTCCAAGCTAACGATG CCCTGGTCGTGAAGCTTATC 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.088513 10021 10288 1260-1273 1.000000 82.1 trnR-UCU-atpA_p4 trnR-UCU-atpA 4 AGCCTTCCAAGCTAACGATG CCTGGTCGTGAAGCTTATCC 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.088513 10021 10288 1259-1272 1.000000 82.1 trnR-UCU-atpA_p5 trnR-UCU-atpA 5 AGCCTTCCAAGCTAACGATG GGTCGTGAAGCTTATCCAGG 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.088513 10021 10288 1256-1269 1.000000 82.1 trnC-GCA-petN_p1 trnC-GCA-petN 1 TTTCCCCAGTTCAAATCCGG AGCCCATGCGAGACTTACTA 20 20 50.0 50.0 58.1 58.2 0.0 0.0 0.305466 28175 28880 736-762 1.000000 83.5 trnC-GCA-petN_p2 trnC-GCA-petN 2 TTTCCCCAGTTCAAATCCGG AGAGTCCACTTCTTCCCCAT 20 20 50.0 50.0 58.1 57.6 0.0 0.0 0.432990 28175 28880 797-823 1.000000 82.1 trnC-GCA-petN_p3 trnC-GCA-petN 3 TTTCCCCAGTTCAAATCCGG TCTTCCCCATACTACGAGGG 20 20 50.0 55.0 58.1 57.6 0.0 0.0 0.458823 28175 28880 787-813 1.000000 81.9 trnC-GCA-petN_p4 trnC-GCA-petN 4 GGGGGACTGCAAATCCTTTT AGCCCATGCGAGACTTACTA 20 20 50.0 50.0 58.4 58.2 14.7 0.0 0.578829 28175 28880 754-780 1.000000 81.2 trnC-GCA-petN_p5 trnC-GCA-petN 5 GGGGGACTGCAAATCCTTTT AGAGTCCACTTCTTCCCCAT 20 20 50.0 50.0 58.4 57.6 14.7 0.0 0.706353 28175 28880 815-841 1.000000 79.8 petN-psbM_p1 petN-psbM 1 TAGTAAGTCTCGCATGGGCT GCACTCTTCATTCTCGTTCCT 20 21 50.0 47.6 58.2 58.0 4.6 0.0 1.257288 28971 29604 789-795 1.000000 71.4 petN-psbM_p2 petN-psbM 2 TAGTAAGTCTCGCATGGGCT ACTGCACTCTTCATTCTCGT 20 20 50.0 45.0 58.2 56.9 4.6 0.0 1.341048 28971 29604 792-798 1.000000 70.7 petN-psbM_p3 petN-psbM 3 ATGGGGAAGAAGTGGACTCT GCACTCTTCATTCTCGTTCCT 20 21 50.0 47.6 57.6 58.0 0.0 0.0 1.384812 28971 29604 728-734 1.000000 70.5 petN-psbM_p4 petN-psbM 4 CCCTCGTAGTATGGGGAAGA GCACTCTTCATTCTCGTTCCT 20 21 55.0 47.6 57.6 58.0 10.1 0.0 1.410645 28971 29604 738-744 1.000000 70.2 petN-psbM_p5 petN-psbM 5 TCCCTCGTAGTATGGGGAAG GCACTCTTCATTCTCGTTCCT 20 21 55.0 47.6 57.6 58.0 10.1 0.0 1.410645 28971 29604 739-745 1.000000 70.2 psbM-trnD-GUC_p1 psbM-trnD-GUC 1 AGGAACGAGAATGAAGAGTGC TTCAATTGGTCAGAGCACCG 21 20 47.6 50.0 58.0 58.5 0.0 5.4 1.511281 29710 30729 624-1138 1.000000 73.2 psbM-trnD-GUC_p2 psbM-trnD-GUC 2 ACGAGAATGAAGAGTGCAGT TTCAATTGGTCAGAGCACCG 20 20 45.0 50.0 56.9 58.5 0.0 5.4 1.595041 29710 30729 620-1134 1.000000 72.5 psbM-trnD-GUC_p3 psbM-trnD-GUC 3 GGAACGAGAATGAAGAGTGCA TTCAATTGGTCAGAGCACCG 21 20 47.6 50.0 58.3 58.5 0.0 5.4 1.788824 29710 30729 623-1137 1.000000 71.0 psbM-trnD-GUC_p4 psbM-trnD-GUC 4 AACGAGAATGAAGAGTGCAGT TTCAATTGGTCAGAGCACCG 21 20 42.9 50.0 57.6 58.5 0.0 5.4 1.870420 29710 30729 621-1135 1.000000 70.3 psbM-trnD-GUC_p5 psbM-trnD-GUC 5 GGAACGAGAATGAAGAGTGC TTCAATTGGTCAGAGCACCG 20 20 50.0 50.0 56.5 58.5 0.0 5.4 1.931209 29710 30729 623-1137 1.000000 69.8 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 TTTCGTAGTACCCTACCCCC GAACCGATGACTTACGCCTT 20 20 55.0 50.0 57.8 58.0 0.0 0.0 0.165150 31468 32223 897-902 1.000000 81.3 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 GCTGCCTCCTTGAAAGAGAG GAACCGATGACTTACGCCTT 20 20 55.0 50.0 58.3 58.0 0.0 0.0 0.269359 31468 32223 859-864 1.000000 80.5 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 TGTCCTGAACCACTAGACGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.287509 31468 32223 838-843 1.000000 80.5 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 TTTCGTAGTACCCTACCCCC CCGATGACTTACGCCTTACC 20 20 55.0 55.0 57.8 58.2 0.0 0.0 0.310083 31468 32223 894-899 1.000000 80.1 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 GCTGCCTCCTTGAAAGAGAG CCGATGACTTACGCCTTACC 20 20 55.0 55.0 58.3 58.2 0.0 0.0 0.414292 31468 32223 856-861 1.000000 79.4 trnM-CAU-psbD_p1 trnM-CAU-psbD 1 GGCGTAAGTCATCGGTTCAA TTTACCAAGGGCTATAGTCA 20 20 50.0 40.0 58.3 53.0 0.0 6.7 5.273069 32289 33673 1384-1434 1.000000 45.2 trnM-CAU-psbD_p2 trnM-CAU-psbD 2 CGCTATGGTAAGGCGTAAGT TTTACCAAGGGCTATAGTCA 20 20 50.0 40.0 57.5 53.0 0.0 6.7 5.494183 32289 33673 1395-1445 1.000000 45.2 trnM-CAU-psbD_p3 trnM-CAU-psbD 3 GGCGTAAGTCATCGGTTCAA TTACCAAGGGCTATAGTCAT 20 20 50.0 40.0 58.3 52.8 0.0 6.7 5.524429 32289 33673 1383-1433 1.000000 45.2 trnM-CAU-psbD_p4 trnM-CAU-psbD 4 GGCCCTTTTAACTCAGTGGT TTTACCAAGGGCTATAGTCA 20 20 50.0 40.0 57.7 53.0 0.0 6.7 5.278240 32289 33673 1422-1472 1.000000 45.1 trnM-CAU-psbD_p5 trnM-CAU-psbD 5 GGCCCTTTTAACTCAGTGGT TTACCAAGGGCTATAGTCAT 20 20 50.0 40.0 57.7 52.8 0.0 6.7 5.529600 32289 33673 1421-1471 1.000000 45.1 trnS-UGA-psbZ_p1 trnS-UGA-psbZ 1 TTTTCAAGACCGGAGCCATC CCAACCATCAGGAGAAGCAA 20 20 50.0 50.0 58.2 57.8 9.5 0.0 0.383806 36380 36723 477-483 1.000000 79.6 trnS-UGA-psbZ_p2 trnS-UGA-psbZ 2 TTTTCAAGACCGGAGCCATC AACCAACCATCAGGAGAAGC 20 20 50.0 50.0 58.2 57.8 9.5 0.0 0.385360 36380 36723 479-485 1.000000 79.6 trnS-UGA-psbZ_p3 trnS-UGA-psbZ 3 GTTTTCAAGACCGGAGCCAT CCAACCATCAGGAGAAGCAA 20 20 50.0 50.0 58.5 57.8 9.5 0.0 0.670294 36380 36723 478-484 1.000000 77.3 trnS-UGA-psbZ_p4 trnS-UGA-psbZ 4 GTTTTCAAGACCGGAGCCAT AACCAACCATCAGGAGAAGC 20 20 50.0 50.0 58.5 57.8 9.5 0.0 0.671848 36380 36723 480-486 1.000000 77.3 trnS-UGA-psbZ_p5 trnS-UGA-psbZ 5 TTTTCAAGACCGGAGCCATC ACTCAACCAACCATCAGGAG 20 20 50.0 50.0 58.2 57.1 9.5 0.0 1.045893 36380 36723 483-489 1.000000 74.3 trnG-UCC-trnfM-CAU_p1 trnG-UCC-trnfM-CAU 1 TCTTTGCCAAGGAGAAGACG CTTGAGGTCACGGGTTCAAA 20 20 50.0 50.0 57.8 58.0 0.0 4.2 0.208039 37359 37497 217-219 1.000000 81.6 trnG-UCC-trnfM-CAU_p2 trnG-UCC-trnfM-CAU 2 TCTTTGCCAAGGAGAAGACG TTCTTTTCATCGCGGGGTAG 20 20 50.0 50.0 57.8 58.0 0.0 6.1 0.188374 37359 37497 267-269 1.000000 81.5 trnG-UCC-trnfM-CAU_p3 trnG-UCC-trnfM-CAU 3 TCTTTGCCAAGGAGAAGACG GGGTAGAGCAGTTTGGTAGC 20 20 50.0 55.0 57.8 58.0 0.0 0.0 0.195421 37359 37497 253-255 1.000000 81.3 trnG-UCC-trnfM-CAU_p4 trnG-UCC-trnfM-CAU 4 TCTTTGCCAAGGAGAAGACG GTCACGGGTTCAAATCCTGT 20 20 50.0 50.0 57.8 58.1 0.0 0.0 0.277623 37359 37497 211-213 1.000000 81.2 trnG-UCC-trnfM-CAU_p5 trnG-UCC-trnfM-CAU 5 TCTTTGCCAAGGAGAAGACG TCACGGGTTCAAATCCTGTC 20 20 50.0 50.0 57.8 57.8 0.0 0.0 0.348744 37359 37497 210-212 1.000000 80.6 rps4-trnT-UGU_p1 rps4-trnT-UGU 1 CGGAGCGTGATTGGTTTCTA CTCAGAGGTTAGAGCATCGC 20 20 50.0 55.0 58.0 57.9 0.0 0.0 0.137323 46645 47029 544-563 1.000000 83.2 rps4-trnT-UGU_p2 rps4-trnT-UGU 2 CGGAGCGTGATTGGTTTCTA ATGGTCATCGGTTCGATTCC 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.245076 46645 47029 512-531 1.000000 82.6 rps4-trnT-UGU_p3 rps4-trnT-UGU 3 CGGAGCGTGATTGGTTTCTA ATTTCGGTTAGTTGAGCCCG 20 20 50.0 50.0 58.0 58.3 0.0 0.0 0.270420 46645 47029 569-588 1.000000 82.0 rps4-trnT-UGU_p4 rps4-trnT-UGU 4 CGGAGCGTGATTGGTTTCTA GGTTAGTTGAGCCCGCTTAG 20 20 50.0 55.0 58.0 58.3 0.0 0.0 0.351431 46645 47029 564-583 1.000000 81.4 rps4-trnT-UGU_p5 rps4-trnT-UGU 5 CGGAGCGTGATTGGTTTCTA CCGCTTAGCTCAGAGGTTAG 20 20 50.0 55.0 58.0 57.5 0.0 7.6 0.505091 46645 47029 552-571 1.000000 80.2 trnL-UAA-trnF-GAA_p1 trnL-UAA-trnF-GAA 1 AATCGTGAGGGTTCAAGTCC TTTGAACTGGTGACACGAGG 20 20 50.0 50.0 57.5 58.1 0.0 20.1 0.526305 48536 48894 448-449 1.000000 79.7 trnL-UAA-trnF-GAA_p2 trnL-UAA-trnF-GAA 2 AATCGTGAGGGTTCAAGTCC TACCAACTGAGCTATCCCGA 20 20 50.0 50.0 57.5 57.6 0.0 0.0 0.921818 48536 48894 410-411 1.000000 76.9 trnL-UAA-trnF-GAA_p3 trnL-UAA-trnF-GAA 3 AATCGTGAGGGTTCAAGTCC GAACTGGTGACACGAGGATT 20 20 50.0 50.0 57.5 57.5 0.0 20.1 0.931776 48536 48894 445-446 1.000000 76.5 trnL-UAA-trnF-GAA_p4 trnL-UAA-trnF-GAA 4 TTCAAGTCCCTCTATCCCCA TTTGAACTGGTGACACGAGG 20 20 50.0 50.0 57.0 58.1 0.0 20.1 1.013432 48536 48894 437-438 1.000000 75.9 trnL-UAA-trnF-GAA_p5 trnL-UAA-trnF-GAA 5 AATCGTGAGGGTTCAAGTCC TCCTCTGCTCTACCAACTGA 20 20 50.0 50.0 57.5 57.4 0.0 0.0 1.079322 48536 48894 420-421 1.000000 75.6 infA-rps8_p1 infA-rps8 1 ATCCTTTCGGAAGCATGACC TCTCAACGAATTCCGCGAAT 20 20 50.0 45.0 58.0 58.0 0.0 8.2 0.048705 80383 80509 350-357 1.000000 84.6 infA-rps8_p2 infA-rps8 2 CGATCCTTTCGGAAGCATGA TCTCAACGAATTCCGCGAAT 20 20 50.0 45.0 58.1 58.0 0.0 8.2 0.064608 80383 80509 352-359 1.000000 84.4 infA-rps8_p3 infA-rps8 3 TGCCTTCGGAAGTGATTCAG TCTCAACGAATTCCGCGAAT 20 20 50.0 45.0 57.9 58.0 16.1 8.2 0.103724 80383 80509 288-295 1.000000 84.4 infA-rps8_p4 infA-rps8 4 ATCCTTTCGGAAGCATGACC CATCGACTAACATCACCGCA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.122879 80383 80509 554-554 0.500000 59.0 infA-rps8_p5 infA-rps8 5 CGATCCTTTCGGAAGCATGA CATCGACTAACATCACCGCA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.138782 80383 80509 556-556 0.500000 58.9 rps8_p1 rps8 1 AGTTCGAGATACAATTTTGATTTTGA AAAATTCGGAGCAAGGGGAA 26 20 26.9 45.0 56.2 57.7 0.0 0.0 8.078188 80510 80914 474-474 0.500000 20.0 rps8_p2 rps8 2 AGTTCGAGATACAATTTTGATTTTGA TTCGGAGCAAGGGGAATTTT 26 20 26.9 45.0 56.2 57.7 0.0 0.0 8.078188 80510 80914 470-470 0.500000 20.0 rps8_p3 rps8 3 AGTTCGAGATACAATTTTGATTTTGA CAAAATTCGGAGCAAGGGGA 26 20 26.9 50.0 56.2 58.5 0.0 0.0 8.230877 80510 80914 475-475 0.500000 20.0 rps8_p4 rps8 4 AGTTCGAGATACAATTTTGATTTTGA TCAAAATTCGGAGCAAGGGG 26 20 26.9 50.0 56.2 58.5 0.0 0.0 8.230877 80510 80914 476-476 0.500000 20.0 rps8_p5 rps8 5 AGTTCGAGATACAATTTTGATTTTGA ATTCGGAGCAAGGGGAATTT 26 20 26.9 45.0 56.2 57.5 0.0 0.0 8.307850 80510 80914 471-471 0.500000 20.0 rpl22_p1 rpl22 1 CGTCGATACGTCCTGCAATT GTGTCCACGGTTATACCCAC 20 20 50.0 55.0 58.4 58.0 0.0 0.0 0.457772 83878 84360 1197-1197 1.000000 78.3 rpl22_p2 rpl22 2 TTCGACTCTTCGGGGCTTAT GTGTCCACGGTTATACCCAC 20 20 50.0 55.0 58.5 58.0 0.0 0.0 0.532465 83878 84360 968-968 1.000000 78.1 rpl22_p3 rpl22 3 CGTCGATACGTCCTGCAATT ATAAACTTCCGGGGACATGC 20 20 50.0 50.0 58.4 57.9 0.0 0.0 0.496219 83878 84360 1074-1074 1.000000 77.8 rpl22_p4 rpl22 4 CGTCGATACGTCCTGCAATT TTGATTCTTCGTCGCCGTAG 20 20 50.0 50.0 58.4 58.1 0.0 0.0 0.539292 83878 84360 1387-1387 1.000000 77.4 rpl22_p5 rpl22 5 CGTCGATACGTCCTGCAATT GTCGGACAAGTGGGAAATGT 20 20 50.0 50.0 58.4 58.1 0.0 2.6 0.551227 83878 84360 1618-1618 1.000000 77.1 ndhF-rpl32_p1 ndhF-rpl32 1 TCCTTGTTGCTGTCGGAAAA ACGCTTTTTCGAAATAGAAGTACG 20 24 45.0 37.5 58.0 58.2 0.0 26.2 4.205311 113125 114044 1065-1077 1.000000 51.1 ndhF-rpl32_p2 ndhF-rpl32 2 TCCTTGTTGCTGTCGGAAAA CGCTTTTTCGAAATAGAAGTACGT 20 24 45.0 37.5 58.0 58.2 0.0 26.2 4.205311 113125 114044 1064-1076 1.000000 51.1 ndhF-rpl32_p3 ndhF-rpl32 3 TTCCTTGTTGCTGTCGGAAA ACGCTTTTTCGAAATAGAAGTACG 20 24 45.0 37.5 58.0 58.2 0.0 26.2 4.205311 113125 114044 1066-1078 1.000000 51.1 ndhF-rpl32_p4 ndhF-rpl32 4 TTCCTTGTTGCTGTCGGAAA CGCTTTTTCGAAATAGAAGTACGT 20 24 45.0 37.5 58.0 58.2 0.0 26.2 4.205311 113125 114044 1065-1077 1.000000 51.1 ndhF-rpl32_p5 ndhF-rpl32 5 AGATTCCTTGTTGCTGTCGG CGCTTTTTCGAAATAGAAGTACGT 20 24 50.0 37.5 58.2 58.2 0.0 26.2 4.346237 113125 114044 1068-1080 1.000000 49.9 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 GGGATATTGGGCAGCATTGA TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.124629 114219 115334 1261-1268 1.000000 84.0 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 AGGGATATTGGGCAGCATTG TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.129647 114219 115334 1262-1269 1.000000 84.0 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 GGGATATTGGGCAGCATTGA AGCAGCGTGTCTACCAATTT 20 20 50.0 45.0 58.0 57.8 0.0 0.0 0.185356 114219 115334 1254-1261 1.000000 83.5 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 AGGGATATTGGGCAGCATTG AGCAGCGTGTCTACCAATTT 20 20 50.0 45.0 58.0 57.8 0.0 0.0 0.190374 114219 115334 1255-1262 1.000000 83.5 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 GGGATATTGGGCAGCATTGA CTAAGAGCAGCGTGTCTACC 20 20 50.0 55.0 58.0 57.8 0.0 0.0 0.196647 114219 115334 1259-1266 1.000000 83.4 trnL-UAG-ccsA_p1 trnL-UAG-ccsA 1 TAGACACGCTGCTCTTAGGA CAATTGAAACGACCGAAAAGGA 20 22 50.0 40.9 57.9 57.8 0.0 0.0 2.342031 115415 115535 236-243 1.000000 65.6 trnL-UAG-ccsA_p2 trnL-UAG-ccsA 2 GTTTTGAACAAGTTGCCGCT CAATTGAAACGACCGAAAAGGA 20 22 45.0 40.9 58.1 57.8 1.8 0.0 2.296510 115415 115535 269-276 1.000000 65.4 trnL-UAG-ccsA_p3 trnL-UAG-ccsA 3 AAGTTGCCGCTATGGTGAAA CAATTGAAACGACCGAAAAGGA 20 22 45.0 40.9 58.1 57.8 0.0 0.0 2.313467 115415 115535 260-267 1.000000 65.4 trnL-UAG-ccsA_p4 trnL-UAG-ccsA 4 AGTTGCCGCTATGGTGAAAT CAATTGAAACGACCGAAAAGGA 20 22 45.0 40.9 57.9 57.8 0.0 0.0 2.346524 115415 115535 259-266 1.000000 65.2 trnL-UAG-ccsA_p5 trnL-UAG-ccsA 5 AAATTGGTAGACACGCTGCT CAATTGAAACGACCGAAAAGGA 20 22 45.0 40.9 57.8 57.8 0.0 0.0 2.402758 115415 115535 243-250 1.000000 65.0 ccsA_p1 ccsA 1 GTTTTGAACAAGTTGCCGCT CTTTGATTCTGGACCCCGAG 20 20 45.0 55.0 58.1 58.0 1.8 0.0 0.108595 115536 116516 1629-1668 1.000000 84.2 ccsA_p2 ccsA 2 AAGTTGCCGCTATGGTGAAA CTTTGATTCTGGACCCCGAG 20 20 45.0 55.0 58.1 58.0 0.0 0.0 0.125551 115536 116516 1620-1659 1.000000 84.1 ccsA_p3 ccsA 3 GTTTTGAACAAGTTGCCGCT TTATCGATGGCTTCCCTTGC 20 20 45.0 50.0 58.1 58.0 1.8 8.5 0.111438 115536 116516 1850-1889 1.000000 83.7 ccsA_p4 ccsA 4 AAGTTGCCGCTATGGTGAAA TTATCGATGGCTTCCCTTGC 20 20 45.0 50.0 58.1 58.0 0.0 8.5 0.128395 115536 116516 1841-1880 1.000000 83.6 ccsA_p5 ccsA 5 GTTTTGAACAAGTTGCCGCT CGAAATGGGTGGAATGGCTA 20 20 45.0 50.0 58.1 57.9 1.8 0.0 0.130091 115536 116516 1905-1944 1.000000 83.5 ccsA-ndhD_p1 ccsA-ndhD 1 TGCTATTTTGGGGTCAATCTCT ACTAGCAAGTGACAAGGTCG 22 20 40.9 50.0 57.4 57.6 0.0 0.0 3.031860 116517 116846 416-448 1.000000 64.6 ccsA-ndhD_p2 ccsA-ndhD 2 TGCTATTTTGGGGTCAATCTCT AGCAAGTGACAAGGTCGAAT 22 20 40.9 45.0 57.4 57.4 0.0 0.0 3.142151 116517 116846 413-445 1.000000 63.7 ccsA-ndhD_p3 ccsA-ndhD 3 TGCTATTTTGGGGTCAATCTCT CTAGCAAGTGACAAGGTCGA 22 20 40.9 50.0 57.4 57.3 0.0 0.0 3.316298 116517 116846 415-447 1.000000 62.3 ccsA-ndhD_p4 ccsA-ndhD 4 TGGGGTCAATCTCTTAGGAA ACTAGCAAGTGACAAGGTCG 20 20 45.0 50.0 55.1 57.6 0.0 0.0 3.320000 116517 116846 408-440 1.000000 62.3 ccsA-ndhD_p5 ccsA-ndhD 5 TTGGGGTCAATCTCTTAGGA ACTAGCAAGTGACAAGGTCG 20 20 45.0 50.0 55.1 57.6 0.0 0.0 3.320000 116517 116846 409-441 1.000000 62.3 ndhA_p1 ndhA 1 CCCGGTTATCATAGGAAGCA TGACGATACTCGGTAGCATAGA 20 22 50.0 45.5 56.8 58.0 0.0 1.3 3.222543 120911 123053 2297-2310 1.000000 56.4 ndhA_p2 ndhA 2 ACCCGGTTATCATAGGAAGC TGACGATACTCGGTAGCATAGA 20 22 50.0 45.5 56.8 58.0 0.0 1.3 3.224762 120911 123053 2298-2311 1.000000 56.4 ndhA_p3 ndhA 3 CCCGGTTATCATAGGAAGCA ATGACGATACTCGGTAGCAT 20 20 50.0 45.0 56.8 55.9 0.0 1.3 3.278279 120911 123053 2298-2311 1.000000 56.0 ndhA_p4 ndhA 4 ACCCGGTTATCATAGGAAGC ATGACGATACTCGGTAGCAT 20 20 50.0 45.0 56.8 55.9 0.0 1.3 3.280498 120911 123053 2299-2312 1.000000 55.9 ndhA_p5 ndhA 5 AACCCGGTTATCATAGGAAGC TGACGATACTCGGTAGCATAGA 21 22 47.6 45.5 57.5 58.0 0.0 1.3 3.488074 120911 123053 2299-2312 1.000000 54.3 rps15-ycf1_p1 rps15-ycf1 1 GCTGGCCCTTTTAGGAACTT TCCTTTGGCCCAATTTTCGA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.077774 124606 124998 1182-1184 1.000000 81.4 rps15-ycf1_p2 rps15-ycf1 2 GCTGGCCCTTTTAGGAACTT TCAAGTTCTTCCTTTGGCCC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.079893 124606 124998 1191-1193 1.000000 81.4 rps15-ycf1_p3 rps15-ycf1 3 GCTGGCCCTTTTAGGAACTT GCGTTTTCAATTGCGATGGA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.099432 124606 124998 1778-1786 1.000000 81.4 rps15-ycf1_p4 rps15-ycf1 4 GGTCCGAGCCATAACAGATG TCCTTTGGCCCAATTTTCGA 20 20 55.0 45.0 58.1 58.0 0.0 0.0 0.131425 124606 124998 1244-1246 1.000000 80.9 rps15-ycf1_p5 rps15-ycf1 5 GGTCCGAGCCATAACAGATG TCAAGTTCTTCCTTTGGCCC 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.133544 124606 124998 1253-1255 1.000000 80.9 ycf1_p1 ycf1 1 AGTTGTGTAGTGATTCTTGGA ACAAACCAAGTGATGATTCT 21 20 38.1 35.0 54.5 52.7 0.0 0.0 9.836336 127119 127238 178-178 0.500000 20.0 ycf1_p2 ycf1 2 AGTTGTGTAGTGATTCTTGGA AACAAACCAAGTGATGATTCT 21 21 38.1 33.3 54.5 53.6 0.0 0.0 9.897771 127119 127238 179-179 0.500000 20.0 ycf1_p3 ycf1 3 AAGTTGTGTAGTGATTCTTGGA ACAAACCAAGTGATGATTCT 22 20 36.4 35.0 55.3 52.7 0.0 0.0 10.024104 127119 127238 179-179 0.500000 20.0 ycf1_p4 ycf1 4 AGTTGTGTAGTGATTCTTGGAA ACAAACCAAGTGATGATTCT 22 20 36.4 35.0 55.3 52.7 0.0 0.0 10.024104 127119 127238 178-178 0.500000 20.0 ycf1_p5 ycf1 5 AGTTGTGTAGTGATTCTTGGAA AACAAACCAAGTGATGATTCT 22 21 36.4 33.3 55.3 53.6 0.0 0.0 10.085539 127119 127238 179-179 0.500000 20.0