primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG CCTCTAGACCTAGCTGCTGT 20 20 55.0 55.0 58.1 57.9 0.0 13.4 0.194818 76 303 292-295 1.000000 83.3 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 GATCCACTTGGCTACATCCG TTCCCTCTAGACCTAGCTGC 20 20 55.0 55.0 58.1 57.9 0.0 0.0 0.203648 76 303 295-298 1.000000 83.2 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 CAATCCACTGCCTTGATCCA CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 57.9 57.9 0.0 13.4 0.199180 76 303 306-309 1.000000 83.1 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 AATCCACTGCCTTGATCCAC CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 57.9 57.9 0.0 13.4 0.200688 76 303 305-308 1.000000 83.1 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 ACAATCCACTGCCTTGATCC CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 57.9 57.9 0.0 13.4 0.200688 76 303 307-310 1.000000 83.1 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAAATCCACGAACGATCCCG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.6 58.1 0.1 16.9 0.710402 5752 6918 1266-1271 1.000000 76.1 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 CGTTGCTTTCTACCACATCG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.2 58.1 0.0 16.9 0.863824 5752 6918 1232-1237 1.000000 74.9 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 GCACGTTGCTTTCTACCACA GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 59.1 58.1 0.0 16.9 1.134559 5752 6918 1235-1240 1.000000 72.7 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AAATCCACGAACGATCCCG GAGGTTCGAATCCTTCCGTC 19 20 52.6 55.0 57.9 58.1 0.1 16.9 1.135704 5752 6918 1265-1270 1.000000 72.7 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AAAATCCACGAACGATCCCG TTCGGAGGTTCGAATCCTTC 20 20 50.0 50.0 58.6 57.3 0.1 16.9 1.301774 5752 6918 1270-1275 1.000000 71.3 trnS-GCU-trnR-UCU_p1 trnS-GCU-trnR-UCU 1 ACGGAAAGAGAGGGATTCGA AGAACTTGCGTCCAATAGGA 20 20 50.0 45.0 58.2 56.6 0.0 0.0 1.594719 8183 10020 1986-2006 1.000000 69.5 trnS-GCU-trnR-UCU_p2 trnS-GCU-trnR-UCU 2 TAGCAATCCGACGCTTTAGG AGAACTTGCGTCCAATAGGA 20 20 50.0 45.0 57.8 56.6 0.0 0.0 1.662324 8183 10020 1935-1955 1.000000 69.0 trnS-GCU-trnR-UCU_p3 trnS-GCU-trnR-UCU 3 ACGGAAAGAGAGGGATTCGA ACATAGAAGAACTTGCGTCCA 20 21 50.0 42.9 58.2 57.3 0.0 0.0 1.829404 8183 10020 1993-2013 1.000000 67.6 trnS-GCU-trnR-UCU_p4 trnS-GCU-trnR-UCU 4 ACGGAAAGAGAGGGATTCGA AAGAACTTGCGTCCAATAGGA 20 21 50.0 42.9 58.2 57.3 0.0 0.0 1.847178 8183 10020 1987-2007 1.000000 67.5 trnS-GCU-trnR-UCU_p5 trnS-GCU-trnR-UCU 5 TAGCAATCCGACGCTTTAGG ACATAGAAGAACTTGCGTCCA 20 21 50.0 42.9 57.8 57.3 0.0 0.0 1.897009 8183 10020 1942-1962 1.000000 67.1 atpF-atpH_p1 atpF-atpH 1 GGCCCAAGGAAAGGAAAGAA GGATTGGTTGTCGCTTTAGC 20 20 50.0 50.0 58.0 57.5 0.0 0.0 0.554161 13426 14064 724-729 1.000000 78.5 atpF-atpH_p2 atpF-atpH 2 ATTAAACCCGAAACTCCCGG GGATTGGTTGTCGCTTTAGC 20 20 50.0 50.0 57.9 57.5 0.0 0.0 0.662793 13426 14064 756-761 1.000000 77.5 atpF-atpH_p3 atpF-atpH 3 GGCCCAAGGAAAGGAAAGAA CGGAGGGAAAAATACGAGGT 20 20 50.0 50.0 58.0 57.3 0.0 0.0 0.695531 13426 14064 789-794 1.000000 77.2 atpF-atpH_p4 atpF-atpH 4 GGCCCAAGGAAAGGAAAGAA GCGGAGGGAAAAATACGAGG 20 20 50.0 55.0 58.0 58.7 0.0 0.0 0.712954 13426 14064 790-795 1.000000 77.0 atpF-atpH_p5 atpF-atpH 5 GGCCCAAGGAAAGGAAAGAA GGCGGAGGGAAAAATACGAG 20 20 50.0 55.0 58.0 58.7 0.0 0.0 0.712954 13426 14064 791-796 1.000000 77.0 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 TCACTTCCATCCACCAGCAT AAAAGGATTTGCAGTCCCCC 20 20 50.0 50.0 59.0 58.4 0.0 14.6 1.361244 27517 28961 1509-1510 1.000000 70.1 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 TTCCCTCACTTCCATCCACC AAAAGGATTTGCAGTCCCCC 20 20 55.0 50.0 59.0 58.4 0.0 14.6 1.363571 27517 28961 1514-1515 1.000000 70.0 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 GACATTCCCTCACTTCCATCC AAAAGGATTTGCAGTCCCCC 21 20 52.4 50.0 58.1 58.4 0.0 14.6 1.431069 27517 28961 1518-1519 1.000000 69.5 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 CATTCCCTCACTTCCATCCA AAAAGGATTTGCAGTCCCCC 20 20 50.0 50.0 56.9 58.4 0.0 14.6 1.463812 27517 28961 1516-1517 1.000000 69.2 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 ATTCCCTCACTTCCATCCAC AAAAGGATTTGCAGTCCCCC 20 20 50.0 50.0 56.9 58.4 0.0 14.6 1.465977 27517 28961 1515-1516 1.000000 69.2 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 TTTCGTAGTACCCTACCCCC GAACCGATGACTTACGCCTT 20 20 55.0 50.0 57.8 58.0 0.0 0.0 0.165150 31876 32855 1121-1126 1.000000 79.3 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 TTTCGTAGTACCCTACCCCC CCATGGCGTTACTCTACCAC 20 20 55.0 55.0 57.8 58.1 0.0 0.0 0.223247 31876 32855 1100-1105 1.000000 78.9 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 TTTCGTAGTACCCTACCCCC TGGCGTTACTCTACCACTGA 20 20 55.0 50.0 57.8 58.1 0.0 0.0 0.245401 31876 32855 1097-1102 1.000000 78.7 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 TGTCCTGAACCACTAGACGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.287509 31876 32855 1062-1067 1.000000 78.4 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 TTTCGTAGTACCCTACCCCC CCGATGACTTACGCCTTACC 20 20 55.0 55.0 57.8 58.2 0.0 0.0 0.310083 31876 32855 1118-1123 1.000000 78.2 psbZ-trnG-UCC_p1 psbZ-trnG-UCC 1 GACGGCTGGTCAAGTAACAA CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 58.1 57.8 0.0 1.1 0.296135 37572 38096 671-677 1.000000 78.8 psbZ-trnG-UCC_p2 psbZ-trnG-UCC 2 ACGGCTGGTCAAGTAACAAA CGTCTTCTCCTTGGCAAAGA 20 20 45.0 50.0 57.7 57.8 0.0 1.1 0.505148 37572 38096 670-676 1.000000 77.1 psbZ-trnG-UCC_p3 psbZ-trnG-UCC 3 CGTTGTGTTTGCTTCTCCTG CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 57.6 57.8 0.0 1.1 0.559545 37572 38096 690-696 1.000000 76.7 psbZ-trnG-UCC_p4 psbZ-trnG-UCC 4 TGTGTTTGCTTCTCCTGACG CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 58.4 57.8 0.0 1.1 0.587899 37572 38096 687-693 1.000000 76.5 psbZ-trnG-UCC_p5 psbZ-trnG-UCC 5 CCGTTGTGTTTGCTTCTCCT CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 58.7 57.8 0.0 1.1 0.860834 37572 38096 691-697 1.000000 74.3 ycf3_p1 ycf3 1 CATTTGACTAATCAGACTAATAAATCA TCCTTTGTTTGTGGGGAATCA 27 21 25.9 42.9 54.2 57.7 0.0 0.0 12.103219 44057 46131 2175-2184 1.000000 41.8 ycf3_p2 ycf3 2 CATTTGACTAATCAGACTAATAAATC TCCTTTGTTTGTGGGGAATCA 26 21 26.9 42.9 52.7 57.7 0.0 0.0 12.614818 44057 46131 2175-2184 1.000000 41.8 ycf3_p3 ycf3 3 CATTTGACTAATCAGACTAATAAATCA ACAATTCCTTTGTTTGTGGGG 27 21 25.9 42.9 54.2 57.2 0.0 0.0 12.618973 44057 46131 2180-2189 1.000000 41.8 ycf3_p4 ycf3 4 CATTTGACTAATCAGACTAATAAATCA CCTTTGTTTGTGGGGAATCA 27 20 25.9 45.0 54.2 56.1 0.0 0.0 12.665965 44057 46131 2174-2183 1.000000 41.8 ycf3_p5 ycf3 5 CATTTGACTAATCAGACTAATAAATCA CAATTCCTTTGTTTGTGGGGA 27 21 25.9 42.9 54.2 56.9 0.0 0.0 12.896637 44057 46131 2179-2188 1.000000 41.8 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 48033 48830 848-850 1.000000 80.2 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 48033 48830 856-858 1.000000 79.7 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 TAGACAAAAGCCGGCTATCG ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 33.1 0.0 0.223577 48033 48830 899-901 1.000000 79.5 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 48033 48830 880-882 1.000000 79.3 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 TAGACAAAAGCCGGCTATCG TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 33.1 0.0 0.288386 48033 48830 907-909 1.000000 78.9 trnL-UAA_p1 trnL-UAA 1 ACACTGCTTTGATTTCAGCA AGGATAAAGCATTAACGAGTCA 20 22 40.0 36.4 56.2 55.3 0.0 0.0 6.562856 48831 49450 675-685 1.000000 41.4 trnL-UAA_p2 trnL-UAA 2 ACACTGCTTTGATTTCAGCA AGCATTAACGAGTCAAATGT 20 20 40.0 35.0 56.2 53.2 0.0 10.1 6.618595 48831 49450 668-678 1.000000 41.4 trnL-UAA_p3 trnL-UAA 3 ACACTGCTTTGATTTCAGCA AAGCATTAACGAGTCAAATGT 20 21 40.0 33.3 56.2 54.1 0.0 10.1 6.721940 48831 49450 669-679 1.000000 41.4 trnL-UAA_p4 trnL-UAA 4 ACACTGCTTTGATTTCAGCA AGCATTAACGAGTCAAATGTT 20 21 40.0 33.3 56.2 54.1 0.0 10.1 6.721940 48831 49450 668-678 1.000000 41.4 trnL-UAA_p5 trnL-UAA 5 ACACTGCTTTGATTTCAGCA AGGATAAAGCATTAACGAGTCAA 20 23 40.0 34.8 56.2 56.0 0.0 0.0 6.824138 48831 49450 675-685 1.000000 41.4 trnC-GCA-ndhJ_p1 trnC-GCA-ndhJ 1 GGGATAGCTCAGCTGGTAGA ACTCATCCACGACTGAAACG 20 20 55.0 50.0 58.0 57.9 10.3 0.0 0.068498 49797 50642 1010-1024 1.000000 81.0 trnC-GCA-ndhJ_p2 trnC-GCA-ndhJ 2 GGGATAGCTCAGCTGGTAGA CTCATCCACGACTGAAACGT 20 20 55.0 50.0 58.0 57.9 10.3 0.0 0.068498 49797 50642 1009-1023 1.000000 81.0 trnC-GCA-ndhJ_p3 trnC-GCA-ndhJ 3 GGGATAGCTCAGCTGGTAGA AGTTGGATAGGATGGCCCTT 20 20 55.0 50.0 58.0 58.1 10.3 0.0 0.089643 49797 50642 974-988 1.000000 80.9 trnC-GCA-ndhJ_p4 trnC-GCA-ndhJ 4 CCTCGTGTCACCAGTTCAAA ACTCATCCACGACTGAAACG 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.117888 49797 50642 974-988 1.000000 80.7 trnC-GCA-ndhJ_p5 trnC-GCA-ndhJ 5 CCTCGTGTCACCAGTTCAAA CTCATCCACGACTGAAACGT 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.117888 49797 50642 973-987 1.000000 80.7 rbcL-accD_p1 rbcL-accD 1 GCTGCTTGTGAGGTATGGAA TTTCCCGCTAGACAACATCG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.118443 58181 58835 755-757 1.000000 80.1 rbcL-accD_p2 rbcL-accD 2 GAGTCCTGAACTAGCTGCTG TTTCCCGCTAGACAACATCG 20 20 55.0 50.0 57.7 58.0 13.4 0.0 0.296685 58181 58835 771-773 1.000000 78.7 rbcL-accD_p3 rbcL-accD 3 GCTGCTTGTGAGGTATGGAA CCCGCTAGACAACATCGAAT 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.338929 58181 58835 752-754 1.000000 78.4 rbcL-accD_p4 rbcL-accD 4 GCTGCTTGTGAGGTATGGAA ACATCGAATTAAACCGCCGT 20 20 50.0 45.0 57.9 58.3 0.0 0.0 0.384577 58181 58835 741-743 1.000000 78.0 rbcL-accD_p5 rbcL-accD 5 GCTGCTTGTGAGGTATGGAA CGAATTAAACCGCCGTTGTT 20 20 50.0 45.0 57.9 57.7 0.0 0.0 0.433102 58181 58835 737-739 1.000000 77.6 petL-petG_p1 petL-petG 1 TCATTTAGCCCCTTCATGCT GGTCTAACTGATCACCACGT 20 20 45.0 50.0 56.9 57.0 0.0 0.0 2.162320 67281 67473 413-413 1.000000 63.9 petL-petG_p2 petL-petG 2 TCATTTAGCCCCTTCATGCT GGTCTAACTGATCACCACGTC 20 21 45.0 52.4 56.9 58.1 0.0 0.0 2.252771 67281 67473 413-413 1.000000 63.1 petL-petG_p3 petL-petG 3 TCATTTAGCCCCTTCATGCTT GGTCTAACTGATCACCACGT 21 20 42.9 50.0 57.6 57.0 0.0 0.0 2.419146 67281 67473 413-413 1.000000 61.8 petL-petG_p4 petL-petG 4 TTCATTTAGCCCCTTCATGCT GGTCTAACTGATCACCACGT 21 20 42.9 50.0 57.6 57.0 0.0 0.0 2.419146 67281 67473 414-414 1.000000 61.8 petL-petG_p5 petL-petG 5 TCATTTAGCCCCTTCATGCT AGGTCTAACTGATCACCACG 20 20 45.0 50.0 56.9 56.7 0.0 0.0 2.458290 67281 67473 414-414 1.000000 61.5 petG-trnW-CCA_p1 petG-trnW-CCA 1 ACGTGGTGATCAGTTAGACC CAAAACCCGATGTCGTAGGT 20 20 50.0 50.0 57.0 57.9 0.0 1.4 1.121164 67588 67724 201-201 1.000000 79.4 petG-trnW-CCA_p2 petG-trnW-CCA 2 GACGTGGTGATCAGTTAGACC CAAAACCCGATGTCGTAGGT 21 20 52.4 50.0 58.1 57.9 0.0 1.4 1.211615 67588 67724 202-202 1.000000 78.6 petG-trnW-CCA_p3 petG-trnW-CCA 3 ACGTGGTGATCAGTTAGACC CCCGATGTCGTAGGTTCAAA 20 20 50.0 50.0 57.0 57.6 0.0 1.4 1.405755 67588 67724 196-196 1.000000 77.3 petG-trnW-CCA_p4 petG-trnW-CCA 4 ACGTGGTGATCAGTTAGACC CTCCAAAACCCGATGTCGTA 20 20 50.0 50.0 57.0 57.6 0.0 1.4 1.405755 67588 67724 204-204 1.000000 77.0 petG-trnW-CCA_p5 petG-trnW-CCA 5 ACGTGGTGATCAGTTAGACC TCCAAAACCCGATGTCGTAG 20 20 50.0 50.0 57.0 57.6 0.0 1.4 1.405755 67588 67724 203-203 1.000000 77.0 ndhF_p1 ndhF 1 TCCAAAATGTCAATCCAGAGT TCGAAGGAGTTGAAAAAGAA 21 20 38.1 35.0 55.1 52.7 0.0 0.0 9.218689 112682 114910 2306-2312 1.000000 41.2 ndhF_p2 ndhF 2 CATCCAAAATGTCAATCCAGAGT TCGAAGGAGTTGAAAAAGAA 23 20 39.1 35.0 57.1 52.7 0.0 0.0 9.230881 112682 114910 2308-2314 1.000000 41.2 ndhF_p3 ndhF 3 TCCAACAAGGAAGAATTGTCT TCGAAGGAGTTGAAAAAGAA 21 20 38.1 35.0 55.0 52.7 0.0 0.0 9.287480 112682 114910 2363-2369 1.000000 41.2 ndhF_p4 ndhF 4 TCATCCAAAATGTCAATCCAGAG TCGAAGGAGTTGAAAAAGAA 23 20 39.1 35.0 56.8 52.7 0.0 0.0 9.484480 112682 114910 2309-2315 1.000000 41.2 ndhF_p5 ndhF 5 TCCAACAAGGAAGAATTGTCTT TCGAAGGAGTTGAAAAAGAA 22 20 36.4 35.0 55.8 52.7 0.0 0.0 9.495815 112682 114910 2363-2369 1.000000 41.2 ndhD-psaC_p1 ndhD-psaC 1 AGAAAATTAAAGAACCCGCCA ATGGCATGAAACCACTCGAA 21 20 38.1 45.0 56.0 57.8 0.0 0.0 3.152384 119143 119282 247-249 1.000000 56.7 ndhD-psaC_p2 ndhD-psaC 2 AGAAAATTAAAGAACCCGCCA CACTCGAAGCATGGGTCTAG 21 20 38.1 55.0 56.0 57.8 0.0 0.0 3.169464 119143 119282 235-237 1.000000 56.7 ndhD-psaC_p3 ndhD-psaC 3 AGAAAATTAAAGAACCCGCCA AGAGATGTGAATCCGCTTGC 21 20 38.1 50.0 56.0 58.3 0.0 0.0 3.292215 119143 119282 299-301 1.000000 55.3 ndhD-psaC_p4 ndhD-psaC 4 AAGAAAATTAAAGAACCCGCCA ATGGCATGAAACCACTCGAA 22 20 36.4 45.0 56.8 57.8 0.0 0.0 3.412941 119143 119282 248-250 1.000000 54.6 ndhD-psaC_p5 ndhD-psaC 5 AGAAAATTAAAGAACCCGCCAA ATGGCATGAAACCACTCGAA 22 20 36.4 45.0 56.8 57.8 0.0 0.0 3.412941 119143 119282 247-249 1.000000 54.6 trnI-CAU-rpl23_p1 trnI-CAU-rpl23 1 GAATGGTTAAAGCGCCCAAC TCGACCCAATGCTTTACTTCT 20 21 50.0 42.9 58.0 57.3 2.3 0.0 1.705031 154252 154434 350-364 1.000000 69.9 trnI-CAU-rpl23_p2 trnI-CAU-rpl23 2 GAATGGTTAAAGCGCCCAAC CGACCCAATGCTTTACTTCTG 20 21 50.0 47.6 58.0 57.3 2.3 0.0 1.756300 154252 154434 349-363 1.000000 69.5 trnI-CAU-rpl23_p3 trnI-CAU-rpl23 3 GAATGGTTAAAGCGCCCAAC TTCGACCCAATGCTTTACTTCT 20 22 50.0 40.9 58.0 58.0 2.3 0.0 2.025073 154252 154434 351-365 1.000000 67.4 trnI-CAU-rpl23_p4 trnI-CAU-rpl23 4 GCTAAGCATCCATGGCTGAA TCGACCCAATGCTTTACTTCT 20 21 50.0 42.9 58.3 57.3 19.8 0.0 2.011887 154252 154434 367-381 1.000000 67.3 trnI-CAU-rpl23_p5 trnI-CAU-rpl23 5 GCTAAGCATCCATGGCTGAA CGACCCAATGCTTTACTTCTG 20 21 50.0 47.6 58.3 57.3 19.8 0.0 2.063156 154252 154434 366-380 1.000000 66.9