feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH_part1 tRNA trnH trnH 1 43 -1 43 LSC 0.000000 0 15 291 11 no 0.166667 2 0.500000 0.000000 1.000000 27.100000 IGS_001 igs trnH|psbA trnH-psbA 44 276 0 233 LSC 0.056938 26 95 300 16 yes 1.000000 6 1.000000 0.064462 0.948498 76.600000 psbA gene psbA psbA 277 1338 -1 1062 LSC 0.006466 14 0 0 0 yes 0.333333 4 0.500000 0.006466 1.000000 35.800000 IGS_002 igs psbA|matK psbA-matK 1339 1922 0 584 LSC 0.010046 14 67 131 1 no 1.000000 6 1.000000 0.010660 0.993151 56.500000 matK gene matK matK 1923 3449 -1 1527 LSC 0.013360 46 0 31 34 no 0.666667 5 0.800000 0.013360 1.000000 49.500000 IGS_003 igs matK|trnK-UUU matK-trnK-UUU 3450 4089 0 640 LSC 0.012520 18 331 24 59 no 1.000000 6 1.000000 0.015999 0.982812 55.500000 trnK-UUU gene trnK-UUU trnK-UUU 4090 4126 -1 37 LSC 0.000000 0 1 55 22 no 0.166667 2 0.500000 0.000000 1.000000 26.800000 IGS_004 igs trnK-UUU|trnQ-UUG trnK-UUU-trnQ-UUG 4127 4189 0 63 LSC 0.020106 3 6 92 75 no 0.666667 5 0.800000 0.020663 1.000000 57.600000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 4190 4261 -1 72 LSC 0.000000 0 0 23 3 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 IGS_005 igs trnQ-UUG|psbK trnQ-UUG-psbK 4262 4543 0 282 LSC 0.023641 17 8 95 60 no 0.666667 5 0.800000 0.021533 0.996454 57.200000 psbK gene psbK psbK 4544 4732 1 189 LSC 0.008113 4 0 12 16 no 0.333333 3 0.666667 0.008113 1.000000 32.200000 IGS_006 igs psbK|psbI psbK-psbI 4733 5076 0 344 LSC 0.023159 17 22 39 53 no 0.666667 5 0.800000 0.022400 1.000000 57.600000 psbI gene psbI psbI 5077 5187 1 111 LSC 0.004805 1 0 26 25 no 0.000000 2 0.000000 0.004805 1.000000 23.900000 IGS_007 igs psbI|trnS-GCU psbI-trnS-GCU 5188 5248 0 61 LSC 0.037158 4 0 57 238 no 0.333333 4 0.500000 0.037158 1.000000 54.200000 trnS-GCU tRNA trnS-GCU trnS-GCU 5249 5336 -1 88 LSC 0.000000 0 0 12 150 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_008 igs trnS-GCU|trnR-UCU trnS-GCU-trnR-UCU 5337 5703 0 367 LSC 0.014441 11 125 100 101 no 0.666667 5 0.800000 0.014812 0.989101 54.100000 trnR-UCU tRNA trnR-UCU trnR-UCU 5704 5775 1 72 LSC 0.000000 0 0 20 29 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 IGS_009 igs trnR-UCU|atpA trnR-UCU-atpA 5776 5992 0 217 LSC 0.012596 6 11 92 14 no 0.666667 5 0.800000 0.011961 1.000000 47.300000 atpA gene atpA atpA 5993 7519 -1 1527 LSC 0.002576 10 0 49 29 no 0.666667 5 0.800000 0.002576 1.000000 41.600000 IGS_010 igs atpA|atpF atpA-atpF 7520 7589 0 70 LSC 0.012381 2 0 44 94 no 0.166667 3 0.333333 0.012381 1.000000 34.300000 atpF gene atpF atpF 7590 8858 -1 1269 LSC 0.009483 26 3 18 44 no 0.666667 5 0.800000 0.009256 1.000000 46.000000 IGS_011 igs atpF|atpH atpF-atpH 8859 9145 0 287 LSC 0.009059 6 21 34 5 no 1.000000 6 1.000000 0.009416 0.975610 49.700000 atpH gene atpH atpH 9146 9391 -1 246 LSC 0.005962 3 0 27 75 no 0.500000 4 0.750000 0.005962 1.000000 34.400000 IGS_012 igs atpH|atpI atpH-atpI 9392 9945 0 554 LSC 0.012274 16 96 11 8 no 1.000000 6 1.000000 0.011841 0.992780 56.900000 atpI gene atpI atpI 9946 10692 -1 747 LSC 0.001606 3 0 40 32 no 0.500000 4 0.750000 0.001606 1.000000 38.000000 IGS_013 igs atpI|rps2 atpI-rps2 10693 10908 0 216 LSC 0.016975 7 16 300 177 yes 0.666667 5 0.800000 0.015771 1.000000 61.900000 rps2 gene rps2 rps2 10909 11619 -1 711 LSC 0.003938 6 0 53 115 no 0.166667 3 0.333333 0.003938 1.000000 34.900000 IGS_014 igs rps2|rpoC2 rps2-rpoC2 11620 11757 0 138 LSC 0.009179 3 0 23 114 no 0.166667 3 0.333333 0.009179 1.000000 30.400000 rpoC2 gene rpoC2 rpoC2 11758 15906 -1 4149 LSC 0.006716 63 5 12 18 no 1.000000 6 1.000000 0.006719 1.000000 44.800000 IGS_015 igs rpoC2|rpoC1 rpoC2-rpoC1 15907 16103 0 197 LSC 0.003046 1 7 14 14 no 0.166667 3 0.333333 0.003083 1.000000 29.200000 rpoC1 gene rpoC1 rpoC1 16104 18865 -1 2762 LSC 0.006710 40 37 178 22 no 0.666667 5 0.800000 0.006372 0.996017 42.900000 IGS_016 igs rpoC1|rpoB rpoC1-rpoB 18866 18891 0 26 LSC 0.012821 1 0 110 27 no 0.166667 2 0.500000 0.012821 1.000000 34.500000 rpoB gene rpoB rpoB 18892 22113 -1 3222 LSC 0.003662 26 0 3 3 no 1.000000 6 1.000000 0.003662 1.000000 43.200000 IGS_017 igs rpoB|trnC-GCA rpoB-trnC-GCA 22114 22883 0 770 LSC 0.011169 20 257 74 84 no 0.666667 5 0.800000 0.010427 0.989610 55.600000 trnC-GCA tRNA trnC-GCA trnC-GCA 22884 22954 1 71 LSC 0.000000 0 0 63 13 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_018 igs trnC-GCA|petN trnC-GCA-petN 22955 23176 0 222 LSC 0.011111 6 25 134 196 no 0.666667 5 0.800000 0.010888 1.000000 55.300000 petN gene petN petN 23177 23266 1 90 LSC 0.000000 0 0 36 106 no 0.000000 1 0.000000 0.000000 1.000000 21.400000 IGS_019 igs petN|psbM petN-psbM 23267 24118 0 852 LSC 0.017958 31 327 126 195 yes 1.000000 6 1.000000 0.013291 0.983568 69.300000 psbM gene psbM psbM 24119 24232 -1 114 LSC 0.000000 0 0 53 81 no 0.000000 1 0.000000 0.000000 1.000000 22.700000 IGS_020 igs psbM|trnD-GUC psbM-trnD-GUC 24233 24867 0 635 LSC 0.022677 31 154 167 76 yes 0.666667 5 0.800000 0.019129 0.996850 64.100000 trnD-GUC tRNA trnD-GUC trnD-GUC 24868 24941 -1 74 LSC 0.000000 0 0 2 2 no 0.000000 1 0.000000 0.000000 1.000000 18.900000 IGS_021 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 24942 25333 0 392 LSC 0.011054 10 14 76 151 no 0.666667 5 0.800000 0.011286 1.000000 51.200000 trnY-GUA tRNA trnY-GUA trnY-GUA 25334 25417 -1 84 LSC 0.000000 0 0 78 67 no 0.000000 1 0.000000 0.000000 1.000000 23.800000 IGS_022 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 25418 25487 0 70 LSC 0.007619 1 1 162 123 no 0.166667 3 0.333333 0.007729 0.985714 37.700000 trnE-UUC tRNA trnE-UUC trnE-UUC 25488 25560 -1 73 LSC 0.000000 0 0 2 50 no 0.000000 1 0.000000 0.000000 1.000000 18.900000 IGS_023 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 25561 25894 0 334 LSC 0.011178 9 1 75 18 no 0.666667 5 0.800000 0.011202 1.000000 42.100000 trnT-GGU tRNA trnT-GGU trnT-GGU 25895 25966 1 72 LSC 0.008333 1 0 37 11 no 0.000000 2 0.000000 0.008333 1.000000 25.100000 IGS_024 igs trnT-GGU|psbD trnT-GGU-psbD 25967 26803 0 837 LSC 0.010593 20 120 53 149 no 0.666667 5 0.800000 0.009805 0.984468 54.000000 psbD gene psbD psbD 26804 27865 1 1062 LSC 0.002511 6 0 132 60 no 0.500000 4 0.750000 0.002511 1.000000 40.700000 psbC gene psbC psbC 27813 29234 1 1422 LSC 0.002672 10 0 46 44 no 1.000000 6 1.000000 0.002672 1.000000 49.100000 IGS_026 igs psbC|trnS-UGA psbC-trnS-UGA 29235 29401 0 167 LSC 0.031138 11 0 213 300 yes 0.666667 5 0.800000 0.031138 1.000000 68.500000 trnS-UGA tRNA trnS-UGA trnS-UGA 29402 29494 -1 93 LSC 0.000000 0 0 16 219 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 IGS_027 igs trnS-UGA|psbZ trnS-UGA-psbZ 29495 29757 0 263 LSC 0.001267 1 0 109 187 no 0.166667 2 0.500000 0.001267 1.000000 31.100000 psbZ gene psbZ psbZ 29758 29946 1 189 LSC 0.001764 1 0 43 150 no 0.166667 2 0.500000 0.001764 1.000000 26.600000 IGS_028 igs psbZ|trnG-GCC psbZ-trnG-GCC 29947 30119 0 173 LSC 0.001927 1 5 1 77 no 0.333333 3 0.666667 0.001938 1.000000 30.100000 trnG-GCC tRNA trnG-GCC trnG-GCC 30120 30190 1 71 LSC 0.000000 0 0 22 6 no 0.000000 1 0.000000 0.000000 1.000000 19.200000 IGS_029 igs trnG-GCC|trnfM-CAU trnG-GCC-trnfM-CAU 30191 30272 0 82 LSC 0.026829 4 0 93 79 no 0.333333 4 0.500000 0.026829 1.000000 49.100000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 30273 30346 -1 74 LSC 0.000000 0 0 0 5 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_030 igs trnfM-CAU|rps14 trnfM-CAU-rps14 30347 30481 0 135 LSC 0.027654 10 0 74 19 no 0.500000 4 0.750000 0.027654 1.000000 51.300000 rps14 gene rps14 rps14 30482 30784 -1 303 LSC 0.005061 4 0 65 82 no 0.666667 5 0.800000 0.005061 1.000000 40.100000 IGS_031 igs rps14|psaB rps14-psaB 30785 30923 0 139 LSC 0.004796 2 0 102 114 no 0.333333 3 0.666667 0.004796 1.000000 36.600000 psaB gene psaB psaB 30924 33131 -1 2208 LSC 0.001147 7 3 43 250 no 0.666667 5 0.800000 0.001148 1.000000 40.300000 IGS_032 igs psaB|psaA psaB-psaA 33132 33156 0 25 LSC 0.000000 0 0 300 225 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psaA gene psaA psaA 33157 35409 -1 2253 LSC 0.002486 12 0 300 57 no 0.666667 5 0.800000 0.002486 1.000000 42.000000 IGS_033 igs psaA|ycf3 psaA-ycf3 35410 35906 0 497 LSC 0.008182 9 94 46 121 no 0.666667 5 0.800000 0.008230 1.000000 49.900000 ycf3 gene ycf3 ycf3 35907 37952 -1 2046 LSC 0.004399 23 29 14 6 no 1.000000 6 1.000000 0.004434 0.996579 48.100000 IGS_034 igs ycf3|trnS-GGA ycf3-trnS-GGA 37953 38536 0 584 LSC 0.030422 38 110 137 103 yes 0.666667 5 0.800000 0.027114 0.996575 71.700000 trnS-GGA tRNA trnS-GGA trnS-GGA 38537 38623 1 87 LSC 0.000000 0 0 27 16 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 IGS_035 igs trnS-GGA|rps4 trnS-GGA-rps4 38624 38782 0 159 LSC 0.011321 4 1 114 216 no 0.166667 3 0.333333 0.011392 0.993711 39.300000 rps4 gene rps4 rps4 38783 39379 -1 597 LSC 0.001117 2 0 61 28 no 0.333333 3 0.666667 0.001117 1.000000 34.200000 IGS_036 igs rps4|trnT-UGU rps4-trnT-UGU 39380 39728 0 349 LSC 0.019198 13 5 87 16 no 0.333333 4 0.500000 0.015460 0.988539 42.000000 trnT-UGU tRNA trnT-UGU trnT-UGU 39729 39801 -1 73 LSC 0.004566 1 0 4 17 no 0.166667 2 0.500000 0.004566 1.000000 25.900000 IGS_037 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 39802 40493 0 692 LSC 0.024085 38 65 56 148 yes 0.666667 5 0.800000 0.024469 1.000000 65.200000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 40494 40531 1 38 LSC 0.000000 0 0 3 110 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 40811 40857 1 47 LSC 0.000000 0 1 12 8 no 0.000000 2 0.000000 0.000000 1.000000 21.800000 IGS_040 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 40858 41021 0 164 LSC 0.023577 8 6 59 104 no 0.666667 5 0.800000 0.019369 0.993902 56.600000 trnF-GAA tRNA trnF-GAA trnF-GAA 41022 41094 1 73 LSC 0.000000 0 0 17 31 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 IGS_041 igs trnF-GAA|trnM-CAU trnF-GAA-trnM-CAU 41095 41689 0 595 LSC 0.011877 15 82 90 90 no 0.666667 5 0.800000 0.013108 1.000000 57.600000 trnM-CAU tRNA trnM-CAU trnM-CAU 41690 41762 1 73 LSC 0.000000 0 0 26 17 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 IGS_042 igs trnM-CAU|atpE trnM-CAU-atpE 41763 41965 0 203 LSC 0.010509 5 1 99 177 no 0.666667 5 0.800000 0.010522 1.000000 47.100000 atpE gene atpE atpE 41966 42367 -1 402 LSC 0.001493 1 0 27 2 no 0.000000 2 0.000000 0.001493 1.000000 22.000000 atpB gene atpB atpB 42364 43854 -1 1491 LSC 0.003935 13 0 220 14 no 1.000000 6 1.000000 0.003935 1.000000 47.700000 IGS_044 igs atpB|rbcL atpB-rbcL 43855 44671 0 817 LSC 0.012566 22 53 110 73 yes 1.000000 6 1.000000 0.012277 0.988984 63.900000 rbcL gene rbcL rbcL 44672 46099 1 1428 LSC 0.001681 6 0 33 24 no 0.666667 5 0.800000 0.001681 1.000000 40.600000 IGS_045 igs rbcL|accD rbcL-accD 46100 46650 0 551 LSC 0.017302 24 60 252 17 no 0.666667 5 0.800000 0.018446 1.000000 56.400000 accD gene accD accD 46651 48117 1 1467 LSC 0.005499 19 3 80 6 no 0.666667 5 0.800000 0.005506 1.000000 42.300000 IGS_046 igs accD|psaI accD-psaI 48118 48222 0 105 LSC 0.018413 5 12 44 9 no 0.666667 5 0.800000 0.017700 1.000000 51.700000 psaI gene psaI psaI 48223 48343 1 121 LSC 0.008815 2 4 2 3 no 0.000000 2 0.000000 0.009117 1.000000 28.700000 IGS_047 igs psaI|ycf4 psaI-ycf4 48344 48676 0 333 LSC 0.019019 14 0 81 80 no 0.666667 5 0.800000 0.019019 1.000000 51.800000 ycf4 gene ycf4 ycf4 48677 49237 1 561 LSC 0.004278 6 0 33 1 no 0.666667 5 0.800000 0.004278 1.000000 40.000000 IGS_048 igs ycf4|cemA ycf4-cemA 49238 49372 0 135 LSC 0.048642 15 21 78 124 yes 0.666667 5 0.800000 0.045016 0.962963 75.900000 cemA gene cemA cemA 49373 50062 1 690 LSC 0.005507 7 0 28 5 no 0.666667 5 0.800000 0.005507 1.000000 41.600000 IGS_049 igs cemA|petA cemA-petA 50063 50318 0 256 LSC 0.014323 8 28 75 296 no 0.666667 5 0.800000 0.014614 0.980469 52.300000 petA gene petA petA 50319 51281 1 963 LSC 0.004015 8 5 64 27 no 0.666667 5 0.800000 0.004022 1.000000 43.000000 IGS_050 igs petA|psbJ petA-psbJ 51282 51460 0 179 LSC 0.009683 4 45 60 119 no 0.666667 5 0.800000 0.008948 1.000000 47.800000 psbJ gene psbJ psbJ 51461 51583 -1 123 LSC 0.004336 1 0 27 10 no 0.000000 2 0.000000 0.004336 1.000000 22.500000 IGS_051 igs psbJ|psbL psbJ-psbL 51584 51722 0 139 LSC 0.006715 2 23 3 106 no 0.666667 5 0.800000 0.006128 1.000000 41.700000 psbL gene psbL psbL 51723 51839 -1 117 LSC 0.004558 1 0 0 46 no 0.000000 2 0.000000 0.004558 1.000000 21.900000 IGS_052 igs psbL|psbF psbL-psbF 51840 51861 0 22 LSC 0.000000 0 0 10 24 no 0.000000 1 0.000000 0.000000 1.000000 19.500000 psbF gene psbF psbF 51862 51981 -1 120 LSC 0.011667 3 0 32 150 no 0.333333 3 0.666667 0.011667 1.000000 35.800000 IGS_053 igs psbF|psbE psbF-psbE 51982 51990 0 9 LSC 0.000000 0 0 17 141 no 0.000000 1 0.000000 NA 1.000000 20.000000 psbE gene psbE psbE 51991 52242 -1 252 LSC 0.001323 1 0 26 65 no 0.166667 2 0.500000 0.001323 1.000000 24.900000 IGS_054 igs psbE|petL psbE-petL 52243 53125 0 883 LSC 0.012005 23 85 110 105 no 0.666667 5 0.800000 0.011028 1.000000 59.800000 petL gene petL petL 53126 53221 1 96 LSC 0.000000 0 0 5 9 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_055 igs petL|petG petL-petG 53222 53407 0 186 LSC 0.026165 10 14 101 145 yes 0.666667 5 0.800000 0.027239 0.978495 62.600000 petG gene petG petG 53408 53521 1 114 LSC 0.000000 0 0 41 31 no 0.000000 1 0.000000 0.000000 1.000000 21.100000 IGS_056 igs petG|trnW-CCA petG-trnW-CCA 53522 53642 0 121 LSC 0.013223 4 0 155 86 no 0.500000 4 0.750000 0.013223 1.000000 44.700000 trnW-CCA tRNA trnW-CCA trnW-CCA 53643 53716 -1 74 LSC 0.000000 0 0 11 12 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 IGS_057 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 53717 53861 0 145 LSC 0.021149 7 9 85 102 no 0.666667 5 0.800000 0.021697 1.000000 59.100000 trnP-UGG tRNA trnP-UGG trnP-UGG 53862 53935 -1 74 LSC 0.000000 0 0 46 28 no 0.000000 1 0.000000 0.000000 1.000000 20.900000 IGS_058 igs trnP-UGG|psaJ trnP-UGG-psaJ 53936 54179 0 244 LSC 0.028689 16 120 120 147 yes 0.666667 5 0.800000 0.038545 1.000000 64.600000 psaJ gene psaJ psaJ 54180 54320 1 141 LSC 0.000000 0 0 7 6 no 0.000000 1 0.000000 0.000000 1.000000 19.200000 IGS_059 igs psaJ|rpl33 psaJ-rpl33 54321 54457 0 137 LSC 0.017032 6 10 148 2 no 0.666667 5 0.800000 0.015353 1.000000 50.400000 rpl33 gene rpl33 rpl33 54458 54634 1 177 LSC 0.019586 8 1 26 1 no 0.666667 5 0.800000 0.019697 0.994350 46.300000 IGS_060 igs rpl33|rps18 rpl33-rps18 54635 54811 0 177 LSC 0.012429 5 12 34 3 no 0.666667 5 0.800000 0.011621 1.000000 46.400000 rps18 gene rps18 rps18 54812 55117 1 306 LSC 0.007625 5 0 13 32 no 0.333333 4 0.500000 0.007625 1.000000 31.600000 IGS_061 igs rps18|rpl20 rps18-rpl20 55118 55298 0 181 LSC 0.012891 5 0 10 99 no 0.666667 5 0.800000 0.012891 1.000000 41.300000 rpl20 gene rpl20 rpl20 55299 55658 -1 360 LSC 0.003519 3 6 29 36 no 0.500000 4 0.750000 0.003547 1.000000 36.200000 IGS_062 igs rpl20|rps12 rpl20-rps12 55659 56438 0 780 LSC 0.008718 16 6 148 216 no 0.666667 5 0.800000 0.008746 1.000000 56.000000 rps12_part1 gene rps12 rps12 56439 56552 -1 114 LSC 0.000000 0 0 25 102 no 0.000000 1 0.000000 0.000000 1.000000 20.600000 IGS_063 igs rps12|clpP rps12-clpP 56553 56695 0 143 LSC 0.002331 1 0 139 284 no 0.166667 2 0.500000 0.002331 1.000000 34.200000 clpP gene clpP clpP 56696 58680 -1 1985 LSC 0.006415 31 90 40 8 no 0.666667 5 0.800000 0.006424 0.994962 47.200000 IGS_064 igs clpP|psbB clpP-psbB 58681 59143 0 463 LSC 0.013103 13 25 38 32 no 0.666667 5 0.800000 0.012988 1.000000 52.400000 psbB gene psbB psbB 59144 60670 1 1527 LSC 0.002183 7 0 48 25 no 0.333333 4 0.500000 0.002183 1.000000 34.600000 IGS_065 igs psbB|psbT psbB-psbT 60671 60854 0 184 LSC 0.019565 10 0 89 110 no 0.500000 4 0.750000 0.019565 1.000000 50.400000 psbT gene psbT psbT 60855 60962 1 108 LSC 0.000000 0 1 76 2 no 0.000000 2 0.000000 0.000000 1.000000 20.000000 IGS_066 igs psbT|psbN psbT-psbN 60963 61029 0 67 LSC 0.055721 8 0 184 116 yes 0.666667 5 0.800000 0.055721 1.000000 74.900000 psbN gene psbN psbN 61030 61161 -1 132 LSC 0.002525 1 0 18 300 no 0.166667 2 0.500000 0.002525 1.000000 25.300000 IGS_067 igs psbN|psbH psbN-psbH 61162 61271 0 110 LSC 0.000000 0 0 15 242 no 0.000000 1 0.000000 0.000000 1.000000 19.900000 psbH gene psbH psbH 61272 61493 1 222 LSC 0.000000 0 0 125 20 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 IGS_068 igs psbH|petB psbH-petB 61494 61612 0 119 LSC 0.016246 5 0 300 204 no 0.333333 4 0.500000 0.016246 1.000000 52.600000 petB gene petB petB 61613 63027 1 1415 LSC 0.006125 20 12 39 25 no 1.000000 6 1.000000 0.006147 1.000000 51.200000 IGS_069 igs petB|petD petB-petD 63028 63228 0 201 LSC 0.013930 6 9 300 116 no 0.333333 4 0.500000 0.013200 1.000000 49.100000 petD gene petD petD 63229 64415 1 1187 LSC 0.008509 25 14 57 68 no 0.666667 5 0.800000 0.008331 1.000000 49.600000 IGS_070 igs petD|rpoA petD-rpoA 64416 64609 0 194 LSC 0.006873 4 72 60 7 no 0.333333 4 0.500000 0.009300 0.994845 35.400000 rpoA gene rpoA rpoA 64610 65617 -1 1008 LSC 0.006217 14 0 2 51 no 1.000000 6 1.000000 0.006217 1.000000 48.400000 IGS_071 igs rpoA|rps11 rpoA-rps11 65618 65685 0 68 LSC 0.007843 1 3 24 74 no 0.000000 3 0.000000 0.008205 0.955882 30.000000 rps11 gene rps11 rps11 65686 66102 -1 417 LSC 0.002078 2 0 16 18 no 0.333333 3 0.666667 0.002078 1.000000 30.200000 IGS_072 igs rps11|rpl36 rps11-rpl36 66103 66261 0 159 LSC 0.020545 7 26 125 101 no 0.666667 5 0.800000 0.016600 0.993711 58.700000 rpl36 gene rpl36 rpl36 66262 66375 -1 114 LSC 0.002924 1 0 19 4 no 0.166667 2 0.500000 0.002924 1.000000 24.600000 IGS_073 igs rpl36|infA rpl36-infA 66376 66555 0 180 LSC 0.022963 10 43 12 34 no 0.666667 5 0.800000 0.022981 1.000000 54.400000 infA gene infA infA 66556 66648 -1 93 LSC 0.017921 5 29 3 2 no 0.333333 3 0.666667 0.022144 1.000000 44.600000 IGS_074 igs infA|rps8 infA-rps8 66649 66766 0 118 LSC 0.029944 8 0 9 174 no 0.666667 5 0.800000 0.029944 1.000000 53.900000 rps8 gene rps8 rps8 66767 67174 -1 408 LSC 0.003268 4 0 3 47 no 0.500000 4 0.750000 0.003268 1.000000 33.300000 IGS_075 igs rps8|rpl14 rps8-rpl14 67175 67323 0 149 LSC 0.008949 4 5 121 24 no 0.666667 5 0.800000 0.009073 1.000000 44.500000 rpl14 gene rpl14 rpl14 67324 67692 -1 369 LSC 0.005239 4 0 31 8 no 0.333333 3 0.666667 0.005239 1.000000 30.800000 IGS_076 igs rpl14|rpl16 rpl14-rpl16 67693 67746 0 54 LSC 0.016049 2 4 35 154 no 0.333333 4 0.500000 0.017333 0.925926 43.300000 rpl16 gene rpl16 rpl16 67747 68156 -1 410 LSC 0.018862 19 159 33 30 no 0.666667 5 0.800000 0.022279 1.000000 53.400000 IGS_077 igs rpl16|rps3 rpl16-rps3 68157 68748 0 592 LSC 0.025507 33 200 54 89 yes 0.666667 5 0.800000 0.023031 0.998311 64.200000 rps3 gene rps3 rps3 68749 69405 -1 657 LSC 0.005885 9 0 7 1 no 0.666667 5 0.800000 0.005885 1.000000 41.900000 rpl22 gene rpl22 rpl22 69390 69869 -1 480 LSC 0.002500 3 6 28 34 no 0.166667 3 0.333333 0.002532 0.987500 30.800000 IGS_079 igs rpl22|rps19 rpl22-rps19 69870 69938 0 69 LSC 0.020290 4 15 20 47 no 0.500000 4 0.750000 0.022459 1.000000 50.700000 rps19 gene rps19 rps19 69939 70220 -1 282 LSC 0.007329 5 0 12 73 no 0.500000 4 0.750000 0.007329 1.000000 34.500000 IGS_080 igs rps19|rpl2 rps19-rpl2 70221 70315 0 95 LSC 0.014737 3 0 17 24 no 0.666667 5 0.800000 0.014737 1.000000 43.100000 rpl2 gene rpl2 rpl2 70316 71798 -1 1483 IRb 0.003012 10 13 11 184 no 0.666667 5 0.800000 0.002931 1.000000 41.600000 IGS_081 igs rpl2|rpl23 rpl2-rpl23 71799 71821 0 23 IRb 0.000000 0 3 300 161 no 0.166667 2 0.500000 0.000000 1.000000 39.500000 rpl23 gene rpl23 rpl23 71822 72103 -1 282 IRb 0.001182 1 0 300 38 no 0.166667 2 0.500000 0.001182 1.000000 25.700000 IGS_082 igs rpl23|trnI-CAU rpl23-trnI-CAU 72104 72268 0 165 IRb 0.006061 3 0 120 122 no 0.333333 3 0.666667 0.006061 1.000000 39.000000 trnI-CAU tRNA trnI-CAU trnI-CAU 72269 72342 -1 74 IRb 0.000000 0 0 22 48 no 0.000000 1 0.000000 0.000000 1.000000 20.400000 IGS_083 igs trnI-CAU|ycf2 trnI-CAU-ycf2 72343 72447 0 105 IRb 0.008254 2 0 96 268 no 0.166667 3 0.333333 0.008254 1.000000 35.200000 ycf2 gene ycf2 ycf2 72448 79173 1 6726 IRb 0.002696 40 18 44 167 no 1.000000 6 1.000000 0.002669 1.000000 43.100000 IGS_084 igs ycf2|ycf15 ycf2-ycf15 79174 79314 0 141 IRb 0.000000 0 0 18 26 no 0.000000 1 0.000000 0.000000 1.000000 20.100000 ycf15 gene ycf15 ycf15 79315 79543 1 229 IRb 0.006987 3 0 159 191 no 0.500000 4 0.750000 0.006987 1.000000 44.800000 IGS_085 igs ycf15|trnL-CAA ycf15-trnL-CAA 79544 80125 0 582 IRb 0.006415 8 11 133 293 no 0.666667 5 0.800000 0.006501 0.989691 53.700000 trnL-CAA tRNA trnL-CAA trnL-CAA 80126 80206 -1 81 IRb 0.000000 0 0 50 212 no 0.000000 1 0.000000 0.000000 1.000000 22.500000 IGS_086 igs trnL-CAA|ndhB trnL-CAA-ndhB 80207 80962 0 756 IRb 0.006702 12 45 131 254 yes 1.000000 6 1.000000 0.006663 1.000000 64.500000 ndhB gene ndhB ndhB 80963 81301 -1 339 IRb 0.003933 3 4 32 26 no 0.166667 3 0.333333 0.002168 1.000000 28.900000 IGS_087 igs ndhB|rps7 ndhB-rps7 81302 81605 0 304 IRb 0.003947 2 1 80 289 no 0.166667 3 0.333333 0.003952 1.000000 31.000000 rps7 gene rps7 rps7 81606 82073 -1 468 IRb 0.001140 1 0 96 300 no 0.000000 2 0.000000 0.001140 1.000000 30.200000 IGS_088 igs rps7|rps12 rps7-rps12 82074 82120 0 47 IRb 0.000000 0 5 178 300 no 0.166667 2 0.500000 0.000000 1.000000 40.900000 rps12_part2 gene rps12 rps12 82121 82913 -1 793 IRb 0.000673 1 3 225 230 no 0.166667 3 0.333333 0.000675 0.996217 44.000000 IGS_089 igs rps12|trnV-GAC rps12-trnV-GAC 82914 84724 0 1811 IRb 0.004712 19 29 300 101 no 0.666667 5 0.800000 0.004641 0.995583 49.700000 trnV-GAC tRNA trnV-GAC trnV-GAC 84725 84796 1 72 IRb 0.000000 0 0 11 29 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 IGS_090 igs trnV-GAC|rrn16 trnV-GAC-rrn16 84797 85027 0 231 IRb 0.003752 2 7 83 300 no 0.500000 4 0.750000 0.003797 1.000000 40.800000 rrn16 rRNA rrn16 rrn16 85028 86518 1 1491 IRb 0.000000 0 0 137 62 no 0.000000 1 0.000000 0.000000 1.000000 29.600000 IGS_091 igs rrn16|trnI-GAU rrn16-trnI-GAU 86519 86805 0 287 IRb 0.009059 5 15 300 197 no 0.166667 3 0.333333 0.009473 0.986063 48.400000 trnI-GAU gene trnI-GAU trnI-GAU 86806 87748 1 943 IRb 0.008484 15 177 33 300 no 0.666667 5 0.800000 0.008455 0.993637 50.100000 IGS_092 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 87749 87812 0 64 IRb 0.000000 0 64 23 300 no 0.000000 2 0.000000 0.000000 1.000000 20.500000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 87813 87850 1 38 IRb 0.000000 0 38 87 300 no 0.000000 2 0.000000 0.000000 1.000000 25.300000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 88672 88706 1 35 IRb 0.000000 0 0 1 80 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_095 igs trnA-UGC|rrn23 trnA-UGC-rrn23 88707 88850 0 144 IRb 0.002315 1 0 36 300 no 0.166667 2 0.500000 0.002315 1.000000 26.500000 rrn23 rRNA rrn23 rrn23 88851 91666 1 2816 IRb 0.000734 5 0 63 98 no 0.666667 5 0.800000 0.000734 1.000000 40.000000 IGS_096 igs rrn23|rrn4.5 rrn23-rrn4.5 91667 91764 0 98 IRb 0.000000 0 0 300 0 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 rrn4.5 rRNA rrn4.5 rrn4.5 91765 91867 1 103 IRb 0.005825 1 0 300 204 no 0.000000 2 0.000000 0.005825 1.000000 37.600000 IGS_097 igs rrn4.5|rrn5 rrn4.5-rrn5 91868 92093 0 226 IRb 0.002360 1 6 102 165 no 0.000000 2 0.000000 0.002424 1.000000 31.100000 rrn5 rRNA rrn5 rrn5 92094 92214 1 121 IRb 0.000000 0 0 21 44 no 0.000000 1 0.000000 0.000000 1.000000 20.300000 IGS_098 igs rrn5|trnR-ACG rrn5-trnR-ACG 92215 92438 0 224 IRb 0.001488 1 6 142 106 no 0.166667 2 0.500000 0.001529 1.000000 34.300000 trnR-ACG tRNA trnR-ACG trnR-ACG 92439 92512 1 74 IRb 0.000000 0 0 179 32 no 0.000000 1 0.000000 0.000000 1.000000 21.100000 IGS_099 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 92513 93031 0 519 IRb 0.007579 11 17 253 138 no 0.666667 5 0.800000 0.007722 1.000000 56.100000 trnN-GUU tRNA trnN-GUU trnN-GUU 93032 93103 -1 72 IRb 0.000000 0 0 11 66 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 IGS_100 igs trnN-GUU|ycf1 trnN-GUU-ycf1 93104 93432 0 329 IRb 0.007903 6 76 83 8 no 1.000000 6 1.000000 0.009419 1.000000 48.500000 ycf1 gene ycf1 ycf1 93433 94296 1 864 IRb 0.004398 8 0 17 12 no 1.000000 6 1.000000 0.004398 1.000000 47.800000 IGS_101 igs ycf1|trnL-UAG ycf1-trnL-UAG 94297 94353 0 57 IRb 0.021053 3 12 45 67 no 0.166667 3 0.333333 0.024795 1.000000 46.500000 trnL-UAG tRNA trnL-UAG trnL-UAG 94354 94433 1 80 IRb 0.004167 1 0 19 43 no 0.166667 2 0.500000 0.004167 1.000000 26.700000 IGS_102 igs trnL-UAG|ccsA trnL-UAG-ccsA 94434 94544 0 111 SSC 0.011411 3 11 12 10 no 0.666667 5 0.800000 0.010615 1.000000 46.200000 ccsA gene ccsA ccsA 94545 95495 1 951 SSC 0.011286 23 15 12 16 no 0.666667 5 0.800000 0.011388 1.000000 48.300000 IGS_103 igs ccsA|psaC ccsA-psaC 95496 95875 0 380 SSC 0.025000 20 115 64 11 no 0.666667 5 0.800000 0.021902 0.997368 56.000000 psaC gene psaC psaC 95876 96121 -1 246 SSC 0.011382 7 0 14 84 no 0.666667 5 0.800000 0.011382 1.000000 41.000000 IGS_104 igs psaC|ycf1 psaC-ycf1 96122 96405 0 284 SSC 0.020892 14 0 35 5 no 0.666667 5 0.800000 0.020892 1.000000 47.200000 ycf1 gene ycf1 ycf1 96406 101424 -1 5019 SSC 0.018955 207 196 12 17 yes 1.000000 6 1.000000 0.018868 1.000000 56.700000 IGS_105 igs ycf1|trnN-GUU ycf1-trnN-GUU 101425 101753 0 329 IRa 0.007903 6 76 8 83 no 1.000000 6 1.000000 0.009419 1.000000 48.500000 trnN-GUU tRNA trnN-GUU trnN-GUU 101754 101825 1 72 IRa 0.000000 0 0 66 11 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 IGS_106 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 101826 102344 0 519 IRa 0.007579 11 17 138 263 no 0.666667 5 0.800000 0.007722 1.000000 56.100000 trnR-ACG tRNA trnR-ACG trnR-ACG 102345 102418 -1 74 IRa 0.000000 0 0 32 189 no 0.000000 1 0.000000 0.000000 1.000000 21.100000 IGS_107 igs trnR-ACG|rrn5 trnR-ACG-rrn5 102419 102642 0 224 IRa 0.001488 1 6 106 142 no 0.166667 2 0.500000 0.001529 1.000000 34.300000 rrn5 rRNA rrn5 rrn5 102643 102763 -1 121 IRa 0.000000 0 0 34 21 no 0.000000 1 0.000000 0.000000 1.000000 20.300000 IGS_108 igs rrn5|rrn4.5 rrn5-rrn4.5 102764 102989 0 226 IRa 0.002360 1 6 155 102 no 0.000000 2 0.000000 0.002424 1.000000 31.100000 rrn4.5 rRNA rrn4.5 rrn4.5 102990 103092 -1 103 IRa 0.005825 1 0 204 300 no 0.000000 2 0.000000 0.005825 1.000000 37.600000 IGS_109 igs rrn4.5|rrn23 rrn4.5-rrn23 103093 103190 0 98 IRa 0.000000 0 0 0 300 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 rrn23 rRNA rrn23 rrn23 103191 106006 -1 2816 IRa 0.000734 5 0 98 63 no 0.666667 5 0.800000 0.000734 1.000000 40.000000 IGS_110 igs rrn23|trnA-UGC rrn23-trnA-UGC 106007 106150 0 144 IRa 0.002315 1 0 300 36 no 0.166667 2 0.500000 0.002315 1.000000 26.500000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 106151 106185 -1 35 IRa 0.000000 0 0 80 1 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 107007 107044 -1 38 IRa 0.000000 0 38 300 87 no 0.000000 2 0.000000 0.000000 1.000000 25.300000 IGS_113 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 107045 107104 0 60 IRa 0.000000 0 60 300 27 no 0.000000 2 0.000000 0.000000 1.000000 20.800000 trnI-GAU gene trnI-GAU trnI-GAU 107105 108047 -1 943 IRa 0.008484 15 180 300 37 no 0.666667 5 0.800000 0.008477 0.993637 50.400000 IGS_114 igs trnI-GAU|rrn16 trnI-GAU-rrn16 108048 108338 0 291 IRa 0.010309 5 15 193 300 no 0.166667 3 0.333333 0.010786 0.986254 48.600000 rrn16 rRNA rrn16 rrn16 108339 109829 -1 1491 IRa 0.000000 0 0 58 137 no 0.000000 1 0.000000 0.000000 1.000000 29.300000 IGS_115 igs rrn16|trnV-GAC rrn16-trnV-GAC 109830 110060 0 231 IRa 0.003752 2 7 300 83 no 0.500000 4 0.750000 0.003797 1.000000 40.800000 trnV-GAC tRNA trnV-GAC trnV-GAC 110061 110132 -1 72 IRa 0.000000 0 0 29 11 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 IGS_116 igs trnV-GAC|rps12 trnV-GAC-rps12 110133 111943 0 1811 IRa 0.004786 19 29 101 300 no 0.666667 5 0.800000 0.004418 0.995583 49.700000 rps12_part2 gene rps12 rps12 111944 112736 1 793 IRa 0.000673 1 3 230 225 no 0.166667 3 0.333333 0.000675 0.996217 44.000000 IGS_117 igs rps12|rps7 rps12-rps7 112737 112783 0 47 IRa 0.000000 0 5 300 178 no 0.166667 2 0.500000 0.000000 1.000000 40.900000 rps7 gene rps7 rps7 112784 113251 1 468 IRa 0.001140 1 0 300 96 no 0.000000 2 0.000000 0.001140 1.000000 30.200000 IGS_118 igs rps7|ndhB rps7-ndhB 113252 113555 0 304 IRa 0.003947 2 1 289 78 no 0.166667 3 0.333333 0.003952 1.000000 30.800000 ndhB gene ndhB ndhB 113556 113894 1 339 IRa 0.004425 4 4 26 32 no 0.166667 3 0.333333 0.003554 1.000000 29.500000 IGS_119 igs ndhB|trnL-CAA ndhB-trnL-CAA 113895 114650 0 756 IRa 0.006702 12 45 254 131 yes 1.000000 6 1.000000 0.006663 1.000000 64.500000 trnL-CAA tRNA trnL-CAA trnL-CAA 114651 114731 1 81 IRa 0.000000 0 0 212 50 no 0.000000 1 0.000000 0.000000 1.000000 22.500000 IGS_120 igs trnL-CAA|ycf15 trnL-CAA-ycf15 114732 115315 0 584 IRa 0.006393 8 11 293 131 no 0.666667 5 0.800000 0.006478 0.989726 53.600000 ycf15 gene ycf15 ycf15 115316 115544 -1 229 IRa 0.006987 3 0 193 157 no 0.500000 4 0.750000 0.006987 1.000000 44.700000 IGS_121 igs ycf15|ycf2 ycf15-ycf2 115545 115683 0 139 IRa 0.000000 0 0 28 18 no 0.000000 1 0.000000 0.000000 1.000000 20.100000 ycf2 gene ycf2 ycf2 115684 122409 -1 6726 IRa 0.002696 40 18 167 44 no 1.000000 6 1.000000 0.002669 1.000000 43.100000 IGS_122 igs ycf2|trnI-CAU ycf2-trnI-CAU 122410 122514 0 105 IRa 0.008254 2 0 268 96 no 0.166667 3 0.333333 0.008254 1.000000 35.200000 trnI-CAU tRNA trnI-CAU trnI-CAU 122515 122588 1 74 IRa 0.000000 0 0 48 22 no 0.000000 1 0.000000 0.000000 1.000000 20.400000 IGS_123 igs trnI-CAU|rpl23 trnI-CAU-rpl23 122589 122753 0 165 IRa 0.004040 2 0 122 120 no 0.333333 3 0.666667 0.004040 1.000000 37.300000 rpl23 gene rpl23 rpl23 122754 123035 1 282 IRa 0.001182 1 0 38 300 no 0.166667 2 0.500000 0.001182 1.000000 25.700000 IGS_124 igs rpl23|rpl2 rpl23-rpl2 123036 123058 0 23 IRa 0.000000 0 5 161 300 no 0.166667 2 0.500000 0.000000 1.000000 39.100000 rpl2 gene rpl2 rpl2 123059 124326 1 1268 IRa 0.001682 5 13 184 54 no 0.666667 5 0.800000 0.001581 1.000000 44.000000 trnH_part2 tRNA trnH trnH 124296 124326 -1 31 IRa 0.000000 0 2 260 54 no 0.166667 2 0.500000 0.000000 1.000000 31.800000