primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 CAATCCACTGCCTTGATCCA TAGACCTAGCCGCTCTTGAA 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.272605 62 400 238-575 1.000000 89.8 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 AATCCACTGCCTTGATCCAC TAGACCTAGCCGCTCTTGAA 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.274112 62 400 237-574 1.000000 89.8 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 ACAATCCACTGCCTTGATCC TAGACCTAGCCGCTCTTGAA 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.274112 62 400 239-576 1.000000 89.8 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 CAATCCACTGCCTTGATCCA CTAGACCTAGCCGCTCTTGA 20 20 50.0 55.0 57.9 58.3 0.0 0.0 0.451743 62 400 239-576 1.000000 88.4 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 AATCCACTGCCTTGATCCAC CTAGACCTAGCCGCTCTTGA 20 20 50.0 55.0 57.9 58.3 0.0 0.0 0.453251 62 400 238-575 1.000000 88.4 trnK-UUU-trnQ-UUG_p1 trnK-UUU-trnQ-UUG 1 ACTTGTGTTGGATTGGCACT GCGGAGGCTTTTAAGGAACT 20 20 45.0 50.0 57.9 58.2 0.0 0.0 0.249272 4792 4911 171-181 1.000000 90.0 trnK-UUU-trnQ-UUG_p2 trnK-UUU-trnQ-UUG 2 GACTTGTGTTGGATTGGCAC GCGGAGGCTTTTAAGGAACT 20 20 50.0 50.0 57.6 58.2 0.0 0.0 0.599770 4792 4911 172-182 1.000000 87.2 trnK-UUU-trnQ-UUG_p3 trnK-UUU-trnQ-UUG 3 AGACTTGTGTTGGATTGGCA GCGGAGGCTTTTAAGGAACT 20 20 45.0 50.0 57.6 58.2 0.0 0.0 0.540800 4792 4911 173-183 0.987500 87.2 trnK-UUU-trnQ-UUG_p4 trnK-UUU-trnQ-UUG 4 TGTGTTGGATTGGCACTACA GCGGAGGCTTTTAAGGAACT 20 20 45.0 50.0 57.4 58.2 0.0 0.0 0.825177 4792 4911 168-178 1.000000 85.4 trnK-UUU-trnQ-UUG_p5 trnK-UUU-trnQ-UUG 5 TTGTGTTGGATTGGCACTACA GCGGAGGCTTTTAAGGAACT 21 20 42.9 50.0 58.1 58.2 0.0 0.0 1.239975 4792 4911 169-179 1.000000 82.1 trnS-GCU-trnS-CGA_p1 trnS-GCU-trnS-CGA 1 ATTAGCAATCCGCCGCTTTA TGAATCAAACCGAAAGATCCCT 20 22 45.0 40.9 58.0 57.7 0.0 0.0 2.339278 9090 9834 827-892 0.987500 72.8 trnS-GCU-trnS-CGA_p2 trnS-GCU-trnS-CGA 2 GCTCGTACAACGGATTAGCA TGAATCAAACCGAAAGATCCCT 20 22 50.0 40.9 58.1 57.7 0.0 0.0 2.383799 9090 9834 840-905 0.987500 72.4 trnS-GCU-trnS-CGA_p3 trnS-GCU-trnS-CGA 3 ACGGAAAGAGAGGGATTCGA TGAATCAAACCGAAAGATCCCT 20 22 50.0 40.9 58.2 57.7 0.0 0.0 2.452420 9090 9834 876-941 0.987500 71.9 trnS-GCU-trnS-CGA_p4 trnS-GCU-trnS-CGA 4 AGCTCGTACAACGGATTAGC TGAATCAAACCGAAAGATCCCT 20 22 50.0 40.9 57.8 57.7 0.0 0.0 2.506379 9090 9834 841-906 0.987500 71.4 trnS-GCU-trnS-CGA_p5 trnS-GCU-trnS-CGA 5 TGGAAACGGAAAGAGAGGGA TGAATCAAACCGAAAGATCCCT 20 22 50.0 40.9 58.3 57.7 0.0 0.0 2.576527 9090 9834 881-946 0.987500 70.9 atpH-atpI_p1 atpH-atpI 1 ATAACGGAAGCGGCAGAAAT TTTTTGCAACTTTAGCCGCG 20 20 45.0 45.0 58.0 58.5 1.4 0.0 0.556109 14484 15635 1235-1273 1.000000 87.6 atpH-atpI_p2 atpH-atpI 2 GTTCCTTGACCAACTCCAGG TTTTTGCAACTTTAGCCGCG 20 20 55.0 45.0 58.1 58.5 0.0 0.0 0.620163 14484 15635 1292-1330 1.000000 87.0 atpH-atpI_p3 atpH-atpI 3 ATAACGGAAGCGGCAGAAAT TAGGTGAATCCATGGAGGGT 20 20 45.0 50.0 58.0 57.4 1.4 21.3 0.625447 14484 15635 1208-1246 1.000000 87.0 atpH-atpI_p4 atpH-atpI 4 CAGCAGTTCCTTGACCAACT TTTTTGCAACTTTAGCCGCG 20 20 50.0 45.0 58.0 58.5 0.0 0.0 0.544850 14484 15635 1297-1335 0.950000 85.5 atpH-atpI_p5 atpH-atpI 5 CAGCAGTTCCTTGACCAACT TAGGTGAATCCATGGAGGGT 20 20 50.0 50.0 58.0 57.4 0.0 21.3 0.614188 14484 15635 1270-1308 0.950000 85.1 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 CGATCAACTCCCTTTCCCAG GAACCGATGACTTACGCCTT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.035809 32981 33760 545-1036 1.000000 91.7 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 CGATCAACTCCCTTTCCCAG CCGATGACTTACGCCTTACC 20 20 55.0 55.0 58.0 58.2 0.0 0.0 0.180742 32981 33760 542-1033 1.000000 90.6 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 CGATCAACTCCCTTTCCCAG ACTCTACCGCTGACTGAGTT 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.117421 32981 33760 514-1005 0.987500 90.6 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 TCCCTTTCCCAGTACCCTAC GAACCGATGACTTACGCCTT 20 20 55.0 50.0 57.7 58.0 0.0 0.0 0.264984 32981 33760 537-1028 1.000000 89.9 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 CGATCAACTCCCTTTCCCAG CGTTACTCTACCGCTGACTG 20 20 55.0 55.0 58.0 57.8 0.0 0.0 0.205368 32981 33760 518-1009 0.987500 89.9 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 48270 49025 796-832 0.987500 89.9 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 48270 49025 788-824 0.975000 89.9 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GCGATGCTCTAACCTCTGAG AGTCCGTAGCGTCTACCAAT 20 20 55.0 50.0 57.9 58.2 0.0 10.2 0.372548 48270 49025 802-838 1.000000 89.0 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 48270 49025 828-864 0.975000 88.5 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 48270 49025 820-856 0.962500 88.5 rbcL-accD_p1 rbcL-accD 1 CTTGCTCGTGACGGTAATGA CCCCCATAAACCCAAACTCC 20 20 50.0 55.0 58.0 58.1 4.7 0.0 0.148560 58390 60723 2158-2997 0.862500 85.3 rbcL-accD_p2 rbcL-accD 2 TCTTGCTCGTGACGGTAATG CCCCCATAAACCCAAACTCC 20 20 50.0 55.0 58.0 58.1 4.7 0.0 0.148560 58390 60723 2159-2998 0.862500 85.3 rbcL-accD_p3 rbcL-accD 3 GCTGCTTGTGAGGTATGGAA TACCAAAACTGGCTGTCACC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.138201 58390 60723 2341-2999 0.475000 69.9 rbcL-accD_p4 rbcL-accD 4 CTTGCTCGTGACGGTAATGA CCACCGGTAGTAGGAGATGT 20 20 50.0 55.0 58.0 57.9 4.7 6.9 0.078035 58390 60723 2381-2999 0.462500 69.9 rbcL-accD_p5 rbcL-accD 5 TCTTGCTCGTGACGGTAATG CCACCGGTAGTAGGAGATGT 20 20 50.0 55.0 58.0 57.9 4.7 6.9 0.078035 58390 60723 2382-3000 0.462500 69.9 petA-psbJ_p1 petA-psbJ 1 CGAGAAGGTTCAATTGTCCG ATTCCGGATTGGGTTCATCG 20 20 50.0 50.0 56.8 58.0 5.1 4.1 1.195174 65988 66997 1047-1105 0.987500 81.9 petA-psbJ_p2 petA-psbJ 2 CGAGAAGGTTCAATTGTCCGA ATTCCGGATTGGGTTCATCG 21 20 47.6 50.0 58.3 58.0 5.1 4.1 1.348714 65988 66997 1047-1105 0.987500 80.7 petA-psbJ_p3 petA-psbJ 3 TCGAGAAGGTTCAATTGTCCG ATTCCGGATTGGGTTCATCG 21 20 47.6 50.0 58.3 58.0 5.1 4.1 1.348714 65988 66997 1048-1106 0.987500 80.7 petA-psbJ_p4 petA-psbJ 4 CGAGAAGGTTCAATTGTCCG GGATTGGGTTCATCGCTGTA 20 20 50.0 50.0 56.8 57.7 5.1 0.0 1.488076 65988 66997 1042-1100 0.987500 79.6 petA-psbJ_p5 petA-psbJ 5 CGAGAAGGTTCAATTGTCCG AGCTGGGATTCTTGTGATCG 20 20 50.0 50.0 56.8 57.7 5.1 0.0 1.484848 65988 66997 1097-1155 0.975000 79.1 rps12-psbB_p1 rps12-psbB 1 GGGGGCTTTTGTGACATTTC ATGGACAGAAAGCAGTCGAC 20 20 50.0 50.0 57.5 57.9 0.0 7.7 0.541728 73544 74725 1294-1338 1.000000 85.8 rps12-psbB_p2 rps12-psbB 2 GGGGGCTTTTGTGACATTTC CGATACCAAGGCAAACCCAT 20 20 50.0 50.0 57.5 58.2 0.0 0.0 0.692966 73544 74725 1245-1289 1.000000 84.8 rps12-psbB_p3 rps12-psbB 3 GGGGGCTTTTGTGACATTTC GTCGACCGGGATCATTCAAT 20 20 50.0 50.0 57.5 57.8 0.0 6.3 0.696167 73544 74725 1280-1324 0.987500 84.0 rps12-psbB_p4 rps12-psbB 4 GTACATGTTCCTCGACGCTG ATGGACAGAAAGCAGTCGAC 20 20 55.0 50.0 58.7 57.9 2.3 7.7 0.816888 73544 74725 1332-1376 1.000000 83.3 rps12-psbB_p5 rps12-psbB 5 AGTACATGTTCCTCGACGCT ATGGACAGAAAGCAGTCGAC 20 20 50.0 50.0 58.8 57.9 2.3 7.7 0.911271 73544 74725 1333-1377 1.000000 82.5 infA-rps8_p1 infA-rps8 1 TTGGACTCTATCGCCTGGAA CGGGATGGGGGTTGTAATTC 20 20 50.0 55.0 58.1 58.3 0.0 0.0 0.451796 82314 82493 376-407 0.900000 82.9 infA-rps8_p2 infA-rps8 2 TTGGACTCTATCGCCTGGAA TCGGCGGAGAAATTTTGTGT 20 20 50.0 45.0 58.1 58.4 0.0 7.2 0.539336 82314 82493 305-336 0.900000 82.8 infA-rps8_p3 infA-rps8 3 TTGGACTCTATCGCCTGGAA CGGCGGAGAAATTTTGTGTT 20 20 50.0 45.0 58.1 57.6 0.0 0.0 0.555056 82314 82493 304-335 0.900000 82.7 infA-rps8_p4 infA-rps8 4 TTGGACTCTATCGCCTGGAA AGAATTTTAGGCGGGATGGG 20 20 50.0 50.0 58.1 57.6 0.0 0.0 0.504331 82314 82493 387-418 0.900000 82.4 infA-rps8_p5 infA-rps8 5 TTGGACTCTATCGCCTGGAA TCGACTAGAAAGAATCGGCG 20 20 50.0 50.0 58.1 57.5 0.0 0.0 0.609555 82314 82493 319-350 0.875000 81.1 trnN-GUU-ndhF_p1 trnN-GUU-ndhF 1 CCGAACGCTCTACCACTAAG GCATATTGATATGTCTGTTCCA 20 22 55.0 36.4 57.8 54.1 0.0 11.5 6.138220 111246 112221 861-1450 0.925000 49.0 trnN-GUU-ndhF_p2 trnN-GUU-ndhF 2 CCCCAAGTAGGATTCGAACC GCATATTGATATGTCTGTTCCA 20 22 55.0 36.4 57.7 54.1 0.0 11.5 6.275095 111246 112221 901-1490 0.925000 49.0 trnN-GUU-ndhF_p3 trnN-GUU-ndhF 3 CGAACGCTCTACCACTAAGC GCATATTGATATGTCTGTTCCA 20 22 55.0 36.4 58.5 54.1 0.0 11.5 6.401061 111246 112221 860-1449 0.925000 49.0 trnN-GUU-ndhF_p4 trnN-GUU-ndhF 4 CCGAACGCTCTACCACTAAG GCATATTGATATGTCTGTTCCAT 20 23 55.0 34.8 57.8 54.6 0.0 11.5 6.557038 111246 112221 861-1450 0.925000 49.0 trnN-GUU-ndhF_p5 trnN-GUU-ndhF 5 CCCCAAGTAGGATTCGAACC GCATATTGATATGTCTGTTCCAT 20 23 55.0 34.8 57.7 54.6 0.0 11.5 6.693913 111246 112221 901-1490 0.925000 49.0 ndhF-trnL-UAG_p1 ndhF-trnL-UAG 1 TCTTGTATTTATCGTATGTATCCA AGCGTGTCTACCGATTTCAC 24 20 29.2 50.0 53.2 58.0 0.0 0.0 8.817543 114484 115550 941-1199 1.000000 52.0 ndhF-trnL-UAG_p2 ndhF-trnL-UAG 2 TCTTGTATTTATCGTATGTATCCA CAGCGTGTCTACCGATTTCA 24 20 29.2 50.0 53.2 58.0 0.0 0.0 8.818913 114484 115550 942-1200 1.000000 52.0 ndhF-trnL-UAG_p3 ndhF-trnL-UAG 3 TCTTGTATTTATCGTATGTATCCA TCCTAAGAGCAGCGTGTCTA 24 20 29.2 50.0 53.2 57.9 0.0 0.0 8.933989 114484 115550 951-1209 1.000000 52.0 ndhF-trnL-UAG_p4 ndhF-trnL-UAG 4 TCTTGTATTTATCGTATGTATCCA CCTAAGAGCAGCGTGTCTAC 24 20 29.2 55.0 53.2 57.8 0.0 0.0 9.006007 114484 115550 950-1208 1.000000 52.0 ndhF-trnL-UAG_p5 ndhF-trnL-UAG 5 TCTTGTATTTATCGTATGTATCCA CTAAGAGCAGCGTGTCTACC 24 20 29.2 55.0 53.2 57.8 0.0 0.0 9.006007 114484 115550 949-1207 1.000000 52.0 ndhH-trnN-GUU_p1 ndhH-trnN-GUU 1 GATACCCACGCCATCCTTTT CGATTGGGACTTGAGACAGA 20 20 50.0 50.0 57.9 57.0 0.0 0.0 1.091204 131520 131639 366-670 0.237500 52.8 ndhH-trnN-GUU_p2 ndhH-trnN-GUU 2 GATACCCACGCCATCCTTTT TCGATTGGGACTTGAGACAG 20 20 50.0 50.0 57.9 57.0 0.0 0.0 1.091204 131520 131639 367-671 0.237500 52.8 ndhH-trnN-GUU_p3 ndhH-trnN-GUU 3 TCCCAAGCGATCGATTTGAG CGATTGGGACTTGAGACAGA 20 20 50.0 50.0 58.1 57.0 25.1 0.0 1.098448 131520 131639 561-609 0.200000 51.2 ndhH-trnN-GUU_p4 ndhH-trnN-GUU 4 TCCCAAGCGATCGATTTGAG TCGATTGGGACTTGAGACAG 20 20 50.0 50.0 58.1 57.0 25.1 0.0 1.098448 131520 131639 562-610 0.200000 51.2 ndhH-trnN-GUU_p5 ndhH-trnN-GUU 5 GAACTTTTCGCGGAAGAACG CGATTGGGACTTGAGACAGA 20 20 50.0 50.0 58.1 57.0 23.5 0.0 1.104965 131520 131639 290-303 0.125000 48.0