feature_id	feature_type	parent_gene	label_name	start	end	strand	length_bp	region	pi	variable_sites	indel_sites	conserved_left_bp	conserved_right_bp	primer_available	species_resolution	unique_haplotype_count	species_specific_haplotype_ratio	interspecific_divergence	alignment_reliability	markerseek_score
trnH-GUG	tRNA	trnH-GUG	trnH-GUG	1	61	-1	61	LSC	0.000000	0	0	31	14	no	0.000000	1	0.000000	0.000000	1.000000	19.800000
IGS_001	igs	trnH-GUG|psbA	trnH-GUG-psbA	62	400	0	339	LSC	0.050988	173	210	92	42	yes	0.662500	64	0.828125	0.049295	0.982301	74.100000
psbA	gene	psbA	psbA	401	1462	-1	1062	LSC	0.004383	47	0	26	97	no	0.300000	40	0.600000	0.004383	1.000000	40.100000
IGS_002	igs	psbA|trnK-UUU	psbA-trnK-UUU	1463	1691	0	229	LSC	0.014723	26	0	197	51	no	0.125000	26	0.384615	0.014723	1.000000	44.000000
trnK-UUU_part2	tRNA	trnK-UUU	trnK-UUU	1692	1726	-1	35	LSC	0.000000	0	0	17	16	no	0.000000	1	0.000000	0.000000	1.000000	20.000000
matK	gene	matK	matK	2020	3534	-1	1515	LSC	0.011437	160	0	3	39	no	0.675000	64	0.843750	0.011437	1.000000	55.500000
IGS_005	igs	matK|trnK-UUU	matK-trnK-UUU	3535	4261	0	727	LSC	0.007652	51	33	31	51	no	0.325000	42	0.619048	0.007679	1.000000	51.200000
trnK-UUU_part1	tRNA	trnK-UUU	trnK-UUU	4262	4298	-1	37	LSC	0.000000	0	0	55	14	no	0.000000	1	0.000000	0.000000	1.000000	19.800000
IGS_006	igs	trnK-UUU|trnQ-UUG	trnK-UUU-trnQ-UUG	4299	7726	0	3428	LSC	0.014034	458	638	92	75	yes	0.912500	76	0.960526	0.013595	0.994457	68.700000
trnQ-UUG	tRNA	trnQ-UUG	trnQ-UUG	7727	7798	-1	72	LSC	0.000000	0	0	30	3	no	0.000000	1	0.000000	0.000000	1.000000	19.000000
IGS_007	igs	trnQ-UUG|psbK	trnQ-UUG-psbK	7799	8147	0	349	LSC	0.008136	30	12	102	46	no	0.200000	27	0.592593	0.008149	1.000000	45.700000
psbK	gene	psbK	psbK	8148	8333	1	186	LSC	0.002770	9	0	235	100	no	0.075000	9	0.666667	0.002770	1.000000	35.000000
IGS_008	igs	psbK|psbI	psbK-psbI	8334	8770	0	437	LSC	0.011102	47	34	139	122	no	0.325000	43	0.604651	0.010992	0.997712	60.500000
psbI	gene	psbI	psbI	8771	8881	1	111	LSC	0.000450	2	0	43	11	no	0.025000	3	0.666667	0.000450	1.000000	22.500000
IGS_009	igs	psbI|trnS-GCU	psbI-trnS-GCU	8882	9001	0	120	LSC	0.013452	11	12	154	170	no	0.075000	14	0.428571	0.013522	1.000000	55.200000
trnS-GCU	tRNA	trnS-GCU	trnS-GCU	9002	9089	-1	88	LSC	0.000284	1	0	27	82	no	0.012500	2	0.500000	0.000284	1.000000	22.600000
IGS_010	igs	trnS-GCU|trnS-CGA	trnS-GCU-trnS-CGA	9090	9834	0	745	LSC	0.013778	117	102	115	155	yes	0.575000	58	0.793103	0.013805	0.993289	68.900000
trnS-CGA_part1	tRNA	trnS-CGA	trnS-CGA	9835	9865	1	31	LSC	0.000000	0	0	103	124	no	0.000000	1	0.000000	0.000000	1.000000	26.500000
trnS-CGA_part2	tRNA	trnS-CGA	trnS-CGA	10564	10623	1	60	LSC	0.000000	0	0	71	41	no	0.000000	1	0.000000	0.000000	1.000000	21.800000
IGS_013	igs	trnS-CGA|trnR-UCU	trnS-CGA-trnR-UCU	10624	10801	0	178	LSC	0.016145	32	37	131	120	no	0.412500	48	0.687500	0.016335	0.971910	60.200000
trnR-UCU	tRNA	trnR-UCU	trnR-UCU	10802	10873	1	72	LSC	0.000347	1	0	14	48	no	0.012500	2	0.500000	0.000347	1.000000	21.900000
IGS_014	igs	trnR-UCU|atpA	trnR-UCU-atpA	10874	10981	0	108	LSC	0.021461	14	1	86	13	no	0.112500	19	0.473684	0.021246	1.000000	45.100000
atpA	gene	atpA	atpA	10982	12505	-1	1524	LSC	0.005233	80	0	19	15	no	0.500000	55	0.727273	0.005233	1.000000	44.400000
IGS_015	igs	atpA|atpF	atpA-atpF	12506	12568	0	63	LSC	0.022376	9	15	119	52	no	0.200000	29	0.551724	0.017292	1.000000	54.500000
atpF	gene	atpF	atpF	12569	13863	-1	1295	LSC	0.004918	73	30	40	25	no	0.500000	53	0.754717	0.004956	0.993050	48.100000
IGS_016	igs	atpF|atpH	atpF-atpH	13864	14237	0	374	LSC	0.017582	50	12	35	72	no	0.300000	38	0.631579	0.017510	1.000000	52.900000
atpH	gene	atpH	atpH	14238	14483	-1	246	LSC	0.002701	7	0	22	169	no	0.037500	7	0.428571	0.002701	1.000000	25.900000
IGS_017	igs	atpH|atpI	atpH-atpI	14484	15635	0	1152	LSC	0.009795	133	76	173	147	yes	0.750000	68	0.882353	0.009823	0.999132	73.100000
atpI	gene	atpI	atpI	15636	16379	-1	744	LSC	0.002805	29	0	14	29	no	0.225000	28	0.642857	0.002805	1.000000	36.400000
IGS_018	igs	atpI|rps2	atpI-rps2	16380	16579	0	200	LSC	0.023013	31	0	93	178	no	0.325000	39	0.666667	0.023013	1.000000	54.700000
rps2	gene	rps2	rps2	16580	17290	-1	711	LSC	0.005499	36	0	32	8	no	0.187500	30	0.500000	0.005499	1.000000	37.900000
IGS_019	igs	rps2|rpoC2	rps2-rpoC2	17291	17500	0	210	LSC	0.014019	24	7	300	53	no	0.150000	25	0.480000	0.014034	1.000000	48.500000
rpoC2	gene	rpoC2	rpoC2	17501	21661	-1	4161	LSC	0.007351	297	9	10	108	no	0.700000	65	0.861538	0.007347	1.000000	46.400000
IGS_020	igs	rpoC2|rpoC1	rpoC2-rpoC1	21662	21842	0	181	LSC	0.008172	14	1	239	188	no	0.062500	16	0.312500	0.008174	1.000000	48.100000
rpoC1	gene	rpoC1	rpoC1	21843	24661	-1	2819	LSC	0.005895	181	26	36	149	no	0.662500	64	0.828125	0.005716	0.997517	49.100000
IGS_021	igs	rpoC1|rpoB	rpoC1-rpoB	24662	24693	0	32	LSC	0.005350	3	0	117	117	no	0.012500	4	0.250000	0.005350	1.000000	41.900000
rpoB	gene	rpoB	rpoB	24694	27897	-1	3204	LSC	0.006607	232	9	149	68	no	0.625000	61	0.819672	0.006613	1.000000	50.700000
IGS_022	igs	rpoB|trnC-GCA	rpoB-trnC-GCA	27898	29145	0	1248	LSC	0.012760	160	229	44	158	no	0.675000	65	0.830769	0.012780	0.999199	65.100000
trnC-GCA	tRNA	trnC-GCA	trnC-GCA	29146	29216	1	71	LSC	0.002411	3	0	20	87	no	0.012500	4	0.250000	0.002411	1.000000	26.900000
IGS_023	igs	trnC-GCA|petN	trnC-GCA-petN	29217	30081	0	865	LSC	0.015414	138	326	91	105	no	0.562500	58	0.775862	0.015268	1.000000	67.500000
petN	gene	petN	petN	30082	30171	1	90	LSC	0.001090	2	0	15	15	no	0.012500	3	0.333333	0.001090	1.000000	23.400000
IGS_024	igs	petN|psbM	petN-psbM	30172	31336	0	1165	LSC	0.015753	162	113	105	17	no	0.750000	68	0.882353	0.015476	0.993991	65.900000
psbM	gene	psbM	psbM	31337	31441	-1	105	LSC	0.005594	6	0	0	140	no	0.050000	7	0.571429	0.005594	1.000000	29.300000
IGS_025	igs	psbM|trnD-GUC	psbM-trnD-GUC	31442	32581	0	1140	LSC	0.012562	131	681	87	118	no	0.725000	67	0.865672	0.012228	0.999123	68.000000
trnD-GUC	tRNA	trnD-GUC	trnD-GUC	32582	32655	-1	74	LSC	0.001655	2	0	9	44	no	0.000000	3	0.000000	0.001655	1.000000	23.500000
IGS_026	igs	trnD-GUC|trnY-GUA	trnD-GUC-trnY-GUA	32656	32764	0	109	LSC	0.013309	13	0	83	94	no	0.125000	16	0.625000	0.013309	1.000000	45.800000
trnY-GUA	tRNA	trnY-GUA	trnY-GUA	32765	32848	-1	84	LSC	0.000588	1	0	32	10	no	0.000000	2	0.000000	0.000588	1.000000	21.300000
IGS_027	igs	trnY-GUA|trnE-UUC	trnY-GUA-trnE-UUC	32849	32907	0	59	LSC	0.009290	5	0	116	148	no	0.025000	6	0.333333	0.009290	1.000000	42.700000
IGS_028	igs	trnE-UUC|trnT-GGU	trnE-UUC-trnT-GGU	32981	33760	0	780	LSC	0.023114	135	520	121	111	yes	0.650000	64	0.812500	0.019410	0.996154	73.800000
trnT-GGU	tRNA	trnT-GGU	trnT-GGU	33761	33836	1	76	LSC	0.001965	5	0	63	35	no	0.050000	6	0.666667	0.001965	1.000000	31.400000
IGS_029	igs	trnT-GGU|psbD	trnT-GGU-psbD	33837	34682	0	846	LSC	0.010501	85	36	139	25	no	0.512500	55	0.745455	0.009885	0.988180	58.500000
psbD	gene	psbD	psbD	34683	35744	1	1062	LSC	0.003676	34	0	69	39	no	0.200000	32	0.500000	0.003676	1.000000	37.300000
psbC	gene	psbC	psbC	35692	37113	1	1422	LSC	0.005911	68	0	300	67	no	0.387500	48	0.645833	0.005911	1.000000	45.900000
IGS_031	igs	psbC|trnS-UGA	psbC-trnS-UGA	37114	37339	0	226	LSC	0.012283	26	2	1	149	no	0.125000	25	0.400000	0.011170	1.000000	40.300000
trnS-UGA	tRNA	trnS-UGA	trnS-UGA	37340	37432	-1	93	LSC	0.000000	0	0	29	56	no	0.000000	1	0.000000	0.000000	1.000000	20.900000
IGS_032	igs	trnS-UGA|psbZ	trnS-UGA-psbZ	37433	37792	0	360	LSC	0.014074	48	34	122	218	no	0.362500	46	0.630435	0.014039	1.000000	60.800000
psbZ	gene	psbZ	psbZ	37793	37981	1	189	LSC	0.000923	6	0	23	29	no	0.062500	7	0.714286	0.000923	1.000000	26.000000
IGS_033	igs	psbZ|trnG-GCC	psbZ-trnG-GCC	37982	38279	0	298	LSC	0.015979	79	50	212	96	no	0.562500	57	0.789474	0.015910	0.963087	60.900000
trnG-GCC	tRNA	trnG-GCC	trnG-GCC	38280	38350	1	71	LSC	0.001400	3	0	36	25	no	0.025000	4	0.500000	0.001400	1.000000	27.000000
IGS_034	igs	trnG-GCC|trnM-CAU	trnG-GCC-trnM-CAU	38351	38530	0	180	LSC	0.017325	40	48	107	0	no	0.300000	36	0.666667	0.017366	0.994444	50.600000
trnM-CAU	tRNA	trnM-CAU	trnM-CAU	38531	38604	-1	74	LSC	0.004884	3	0	60	7	no	0.012500	4	0.250000	0.004884	1.000000	26.800000
IGS_035	igs	trnM-CAU|rps14	trnM-CAU-rps14	38605	38741	0	137	LSC	0.010889	12	2	73	109	no	0.062500	13	0.384615	0.010888	1.000000	43.100000
rps14	gene	rps14	rps14	38742	39044	-1	303	LSC	0.007578	30	0	42	7	no	0.200000	26	0.615385	0.007578	1.000000	38.900000
IGS_036	igs	rps14|psaB	rps14-psaB	39045	39172	0	128	LSC	0.010483	14	5	121	300	no	0.037500	14	0.214286	0.008355	0.960938	49.200000
psaB	gene	psaB	psaB	39173	41377	-1	2205	LSC	0.004858	99	0	53	300	no	0.462500	53	0.698113	0.004858	1.000000	44.000000
IGS_037	igs	psaB|psaA	psaB-psaA	41378	41402	0	25	LSC	0.000000	0	0	215	300	no	0.000000	1	0.000000	0.000000	1.000000	33.800000
psaA	gene	psaA	psaA	41403	43655	-1	2253	LSC	0.003595	81	0	240	58	no	0.400000	49	0.653061	0.003595	1.000000	41.400000
IGS_038	igs	psaA|ycf3	psaA-ycf3	43656	44441	0	786	LSC	0.018226	120	153	180	13	no	0.712500	66	0.863636	0.017318	0.961832	64.400000
ycf3	gene	ycf3	ycf3	44442	46434	-1	1993	LSC	0.006189	129	33	6	12	no	0.600000	59	0.813559	0.005993	1.000000	48.600000
IGS_039	igs	ycf3|trnS-GGA	ycf3-trnS-GGA	46435	46838	0	404	LSC	0.015174	56	5	149	184	no	0.325000	39	0.666667	0.015258	0.992574	58.800000
trnS-GGA	tRNA	trnS-GGA	trnS-GGA	46839	46925	1	87	LSC	0.000000	0	0	0	97	no	0.000000	1	0.000000	0.000000	1.000000	18.800000
IGS_040	igs	trnS-GGA|rps4	trnS-GGA-rps4	46926	47226	0	301	LSC	0.011566	41	25	87	132	no	0.325000	40	0.650000	0.011581	0.996678	55.100000
rps4	gene	rps4	rps4	47227	47820	-1	594	LSC	0.005822	31	0	53	83	no	0.312500	35	0.714286	0.005822	1.000000	43.900000
IGS_041	igs	rps4|trnT-UGU	rps4-trnT-UGU	47821	48196	0	376	LSC	0.012050	45	45	38	96	no	0.337500	43	0.627907	0.011659	1.000000	53.500000
trnT-UGU	tRNA	trnT-UGU	trnT-UGU	48197	48269	-1	73	LSC	0.001019	2	0	37	23	no	0.012500	3	0.333333	0.001019	1.000000	24.600000
IGS_042	igs	trnT-UGU|trnL-UAA	trnT-UGU-trnL-UAA	48270	49025	0	756	LSC	0.017016	125	65	110	66	yes	0.712500	66	0.863636	0.016344	0.997354	69.500000
trnL-UAA_part1	tRNA	trnL-UAA	trnL-UAA	49026	49060	1	35	LSC	0.002125	2	0	1	31	no	0.012500	3	0.333333	0.002125	1.000000	27.200000
trnL-UAA_part2	tRNA	trnL-UAA	trnL-UAA	49574	49623	1	50	LSC	0.000000	0	1	110	20	no	0.000000	2	0.000000	0.000000	1.000000	22.700000
IGS_045	igs	trnL-UAA|trnF-GAA	trnL-UAA-trnF-GAA	49624	49984	0	361	LSC	0.016159	61	15	160	16	no	0.387500	44	0.704545	0.016229	0.997230	53.300000
trnF-GAA	tRNA	trnF-GAA	trnF-GAA	49985	50057	1	73	LSC	0.003290	1	0	2	7	no	0.000000	2	0.000000	0.003290	1.000000	22.100000
IGS_046	igs	trnF-GAA|ndhJ	trnF-GAA-ndhJ	50058	50474	0	417	LSC	0.013753	64	66	56	75	no	0.487500	55	0.709091	0.013730	0.997602	59.100000
ndhJ	gene	ndhJ	ndhJ	50475	50951	-1	477	LSC	0.006368	27	0	32	6	no	0.175000	30	0.466667	0.006368	1.000000	36.100000
IGS_047	igs	ndhJ|ndhK	ndhJ-ndhK	50952	51050	0	99	LSC	0.007365	8	1	10	175	no	0.062500	9	0.555556	0.007370	1.000000	35.300000
ndhK	gene	ndhK	ndhK	51051	51728	-1	678	LSC	0.004145	38	0	18	6	no	0.287500	36	0.638889	0.004145	1.000000	39.700000
IGS_048	igs	ndhK|ndhC	ndhK-ndhC	51729	51784	0	56	LSC	0.009861	7	0	300	135	no	0.075000	10	0.600000	0.009861	1.000000	47.200000
ndhC	gene	ndhC	ndhC	51785	52147	-1	363	LSC	0.007239	20	0	49	116	no	0.150000	21	0.571429	0.007239	1.000000	36.700000
IGS_049	igs	ndhC|trnM-CAU	ndhC-trnM-CAU	52148	54004	0	1857	LSC	0.011394	191	150	105	116	no	0.675000	65	0.830769	0.011214	0.995153	68.300000
trnM-CAU	tRNA	trnM-CAU	trnM-CAU	54005	54077	1	73	LSC	0.000000	0	0	11	43	no	0.000000	1	0.000000	0.000000	1.000000	19.600000
IGS_050	igs	trnM-CAU|atpE	trnM-CAU-atpE	54078	54297	0	220	LSC	0.015594	33	0	84	98	no	0.237500	35	0.542857	0.015594	1.000000	49.000000
atpE	gene	atpE	atpE	54298	54699	-1	402	LSC	0.004045	27	0	12	118	no	0.250000	29	0.689655	0.004045	1.000000	36.700000
atpB	gene	atpB	atpB	54696	56192	-1	1497	LSC	0.005222	76	0	299	71	no	0.450000	49	0.734694	0.005222	1.000000	47.500000
IGS_052	igs	atpB|rbcL	atpB-rbcL	56193	56961	0	769	LSC	0.011568	76	29	14	31	no	0.512500	56	0.732143	0.010161	0.996099	57.700000
rbcL	gene	rbcL	rbcL	56962	58389	1	1428	LSC	0.011579	107	0	51	79	no	0.550000	57	0.771930	0.011579	1.000000	53.700000
IGS_053	igs	rbcL|accD	rbcL-accD	58390	60723	0	2334	LSC	0.128174	1319	1910	20	44	yes	0.937500	77	0.974026	0.112277	0.899314	76.800000
accD	gene	accD	accD	60724	61539	1	816	LSC	0.018400	121	95	12	63	no	0.587500	58	0.810345	0.018377	1.000000	63.900000
IGS_054	igs	accD|psaI	accD-psaI	61540	62067	0	528	LSC	0.018709	93	113	21	138	no	0.587500	58	0.810345	0.018784	1.000000	63.100000
psaI	gene	psaI	psaI	62068	62178	1	111	LSC	0.003056	7	0	26	27	no	0.087500	9	0.777778	0.003056	1.000000	31.600000
IGS_055	igs	psaI|ycf4	psaI-ycf4	62179	62616	0	438	LSC	0.010779	49	52	137	131	no	0.562500	57	0.789474	0.009705	0.993151	64.900000
ycf4	gene	ycf4	ycf4	62617	63171	1	555	LSC	0.008055	51	0	83	14	no	0.312500	37	0.675676	0.008055	1.000000	46.100000
IGS_056	igs	ycf4|cemA	ycf4-cemA	63172	64117	0	946	LSC	0.013210	127	84	18	27	no	0.675000	64	0.843750	0.012330	0.995772	63.400000
cemA	gene	cemA	cemA	64118	64807	1	690	LSC	0.004587	35	0	34	29	no	0.187500	29	0.517241	0.004587	1.000000	39.100000
IGS_057	igs	cemA|petA	cemA-petA	64808	65024	0	217	LSC	0.009850	16	0	45	16	no	0.050000	13	0.307692	0.009850	1.000000	34.500000
petA	gene	petA	petA	65025	65987	1	963	LSC	0.005059	61	0	47	51	no	0.475000	50	0.760000	0.005059	1.000000	47.600000
IGS_058	igs	petA|psbJ	petA-psbJ	65988	66997	0	1010	LSC	0.015121	156	99	77	102	yes	0.662500	64	0.828125	0.015135	1.000000	68.700000
psbJ	gene	psbJ	psbJ	66998	67120	-1	123	LSC	0.005390	8	0	45	11	no	0.037500	8	0.375000	0.005390	1.000000	30.800000
IGS_059	igs	psbJ|psbF	psbJ-psbF	67121	67421	0	301	LSC	0.006729	15	11	20	48	no	0.162500	22	0.590909	0.006729	1.000000	37.100000
psbF	gene	psbF	psbF	67422	67541	-1	120	LSC	0.005401	2	0	3	279	no	0.000000	2	0.000000	0.005401	1.000000	23.500000
IGS_060	igs	psbF|psbE	psbF-psbE	67542	67550	0	9	LSC	0.000000	0	0	8	270	no	0.000000	1	0.000000	NA	1.000000	19.400000
psbE	gene	psbE	psbE	67551	67802	-1	252	LSC	0.000669	3	0	17	18	no	0.025000	4	0.500000	0.000669	1.000000	22.300000
IGS_061	igs	psbE|petL	psbE-petL	67803	69079	0	1277	LSC	0.013422	175	343	269	8	no	0.687500	64	0.859375	0.013382	1.000000	63.000000
petL	gene	petL	petL	69080	69175	1	96	LSC	0.010565	7	0	56	42	no	0.050000	10	0.400000	0.010565	1.000000	36.700000
IGS_062	igs	petL|petG	petL-petG	69176	69349	0	174	LSC	0.008366	19	1	33	154	no	0.075000	16	0.375000	0.008375	1.000000	39.600000
petG	gene	petG	petG	69350	69463	1	114	LSC	0.000872	3	0	10	40	no	0.025000	4	0.500000	0.000872	1.000000	23.700000
IGS_063	igs	petG|trnW-CCA	petG-trnW-CCA	69464	69585	0	122	LSC	0.009363	14	8	124	91	no	0.100000	16	0.500000	0.009634	1.000000	50.100000
trnW-CCA	tRNA	trnW-CCA	trnW-CCA	69586	69659	-1	74	LSC	0.000338	1	0	34	17	no	0.012500	2	0.500000	0.000338	1.000000	22.100000
IGS_064	igs	trnW-CCA|trnP-UGG	trnW-CCA-trnP-UGG	69660	69830	0	171	LSC	0.009916	24	9	108	82	no	0.175000	26	0.538462	0.009920	1.000000	51.400000
trnP-UGG	tRNA	trnP-UGG	trnP-UGG	69831	69904	-1	74	LSC	0.000000	0	0	93	8	no	0.000000	1	0.000000	0.000000	1.000000	19.400000
IGS_065	igs	trnP-UGG|psaJ	trnP-UGG-psaJ	69905	70382	0	478	LSC	0.022397	79	172	167	27	no	0.625000	61	0.819672	0.020302	0.970711	63.500000
psaJ	gene	psaJ	psaJ	70383	70517	1	135	LSC	0.007618	4	1	107	31	no	0.012500	7	0.142857	0.007619	1.000000	29.400000
IGS_066	igs	psaJ|rpl33	psaJ-rpl33	70518	70984	0	467	LSC	0.014850	69	86	105	56	no	0.525000	54	0.777778	0.014708	1.000000	61.500000
rpl33	gene	rpl33	rpl33	70985	71191	1	207	LSC	0.010119	17	0	101	27	no	0.125000	20	0.500000	0.010119	1.000000	37.900000
IGS_067	igs	rpl33|rps18	rpl33-rps18	71192	71509	0	318	LSC	0.015156	33	74	48	65	no	0.312500	41	0.609756	0.014847	0.993711	53.500000
rps18	gene	rps18	rps18	71510	71809	1	300	LSC	0.017485	35	0	69	0	no	0.287500	40	0.575000	0.017485	1.000000	44.500000
IGS_068	igs	rps18|rpl20	rps18-rpl20	71810	72240	0	431	LSC	0.019212	77	190	13	51	no	0.550000	58	0.758621	0.019244	0.997680	59.800000
rpl20	gene	rpl20	rpl20	72241	72648	-1	408	LSC	0.010508	52	1	9	90	no	0.362500	44	0.659091	0.010509	1.000000	46.000000
IGS_069	igs	rpl20|rps12	rpl20-rps12	72649	73429	0	781	LSC	0.011107	61	41	31	166	no	0.512500	54	0.759259	0.010278	0.991037	57.500000
rps12_part1	gene	rps12	rps12	73430	73543	-1	114	LSC	0.000219	1	0	46	52	no	0.012500	2	0.500000	0.000219	1.000000	23.600000
IGS_070	igs	rps12|psbB	rps12-psbB	73544	74725	0	1182	LSC	0.011605	125	37	160	218	yes	0.550000	56	0.785714	0.011579	1.000000	68.900000
psbB	gene	psbB	psbB	74726	76252	1	1527	LSC	0.004864	72	0	95	44	no	0.475000	52	0.730769	0.004864	1.000000	45.200000
IGS_071	igs	psbB|psbT	psbB-psbT	76253	76444	0	192	LSC	0.021782	29	14	7	86	no	0.362500	46	0.630435	0.019847	0.994792	54.400000
psbT	gene	psbT	psbT	76445	76546	1	102	LSC	0.005166	5	0	1	42	no	0.062500	8	0.625000	0.005166	1.000000	28.400000
IGS_072	igs	psbT|psbN	psbT-psbN	76547	76613	0	67	LSC	0.017603	9	3	15	33	no	0.025000	6	0.333333	0.018429	0.955224	44.400000
psbN	gene	psbN	psbN	76614	76745	-1	132	LSC	0.005955	7	0	24	7	no	0.025000	8	0.250000	0.005955	1.000000	29.100000
IGS_073	igs	psbN|psbH	psbN-psbH	76746	76849	0	104	LSC	0.005818	9	0	35	22	no	0.075000	10	0.600000	0.005818	1.000000	35.200000
psbH	gene	psbH	psbH	76850	77071	1	222	LSC	0.007371	14	0	96	12	no	0.100000	18	0.444444	0.007371	1.000000	32.700000
IGS_074	igs	psbH|petB	psbH-petB	77072	77195	0	124	LSC	0.013077	18	0	69	46	no	0.112500	17	0.529412	0.013077	1.000000	42.700000
petB	gene	petB	petB	77196	78631	1	1436	LSC	0.007826	112	191	22	8	no	0.600000	59	0.813559	0.007775	1.000000	56.300000
IGS_075	igs	petB|rps11	petB-rps11	78632	81380	0	2749	LSC	0.011023	281	72	75	6	no	0.787500	70	0.900000	0.010945	0.999272	58.300000
rps11	gene	rps11	rps11	81381	81797	-1	417	LSC	0.009239	43	0	16	20	no	0.287500	41	0.560976	0.009239	1.000000	44.400000
IGS_076	igs	rps11|rpl36	rps11-rpl36	81798	81902	0	105	LSC	0.025083	19	2	48	57	no	0.287500	34	0.676471	0.024682	1.000000	53.900000
rpl36	gene	rpl36	rpl36	81903	82016	-1	114	LSC	0.005677	4	0	17	56	no	0.000000	5	0.000000	0.005677	1.000000	27.000000
IGS_077	igs	rpl36|infA	rpl36-infA	82017	82136	0	120	LSC	0.014022	15	9	44	61	no	0.187500	29	0.517241	0.014416	0.991667	50.100000
infA	gene	infA	infA	82137	82313	-1	177	LSC	0.007516	16	0	22	6	no	0.162500	21	0.619048	0.007516	1.000000	36.900000
IGS_078	igs	infA|rps8	infA-rps8	82314	82493	0	180	LSC	0.042121	48	12	115	163	yes	0.450000	47	0.765957	0.040368	0.966667	72.200000
rps8	gene	rps8	rps8	82494	82904	-1	411	LSC	0.010377	40	0	50	17	no	0.325000	41	0.634146	0.010377	1.000000	45.300000
IGS_079	igs	rps8|rpl14	rps8-rpl14	82905	83089	0	185	LSC	0.014024	27	30	39	87	no	0.400000	48	0.666667	0.013950	0.994595	53.700000
rpl14	gene	rpl14	rpl14	83090	83458	-1	369	LSC	0.006957	28	0	27	117	no	0.187500	29	0.517241	0.006957	1.000000	38.300000
IGS_080	igs	rpl14|rpl16	rpl14-rpl16	83459	83625	0	167	LSC	0.011993	29	32	51	8	no	0.250000	35	0.571429	0.012112	0.994012	47.800000
rpl16	gene	rpl16	rpl16	83626	84036	-1	411	LSC	0.006291	23	0	36	77	no	0.125000	21	0.476190	0.006291	1.000000	35.900000
IGS_081	igs	rpl16|rps3	rpl16-rps3	84037	85261	0	1225	LSC	0.011495	160	249	120	6	no	0.687500	65	0.846154	0.011441	1.000000	62.000000
rps3	gene	rps3	rps3	85262	85630	-1	369	LSC	0.008271	24	0	45	34	no	0.162500	25	0.520000	0.008271	1.000000	37.600000
IGS_082	igs	rps3|rpl22	rps3-rpl22	85631	85926	0	296	LSC	0.011299	30	0	6	136	no	0.237500	29	0.655172	0.011299	1.000000	41.200000
rpl22	gene	rpl22	rpl22	85927	86409	-1	483	LSC	0.005762	30	18	55	300	no	0.187500	26	0.576923	0.005824	1.000000	45.000000
IGS_083	igs	rpl22|rps19	rpl22-rps19	86410	86501	0	92	LSC	0.003715	7	5	80	239	no	0.037500	7	0.428571	0.003928	0.945652	40.600000
rps19	gene	rps19	rps19	86502	86726	-1	225	LSC	0.004037	12	0	172	14	no	0.037500	13	0.230769	0.004037	1.000000	29.000000
IGS_084	igs	rps19|rpl2	rps19-rpl2	86727	86839	0	113	LSC	0.011112	12	4	300	7	no	0.137500	20	0.550000	0.011008	1.000000	43.700000
rpl2	gene	rpl2	rpl2	86840	88327	-1	1488	LSC	0.009663	126	19	18	15	no	0.625000	61	0.819672	0.009658	1.000000	54.400000
IGS_085	igs	rpl2|rpl23	rpl2-rpl23	88328	88331	0	4	LSC	0.000000	0	0	45	11	no	0.000000	1	0.000000	NA	1.000000	19.600000
rpl23	gene	rpl23	rpl23	88332	88622	-1	291	LSC	0.022474	46	0	49	156	no	0.225000	36	0.500000	0.022474	1.000000	49.300000
IGS_086	igs	rpl23|trnI-GAU	rpl23-trnI-GAU	88623	88787	0	165	IRb	0.003569	10	10	77	164	no	0.062500	8	0.625000	0.003609	1.000000	41.100000
trnI-GAU	tRNA	trnI-GAU	trnI-GAU	88788	88861	-1	74	IRb	0.000342	1	23	8	90	no	0.025000	3	0.666667	0.000334	1.000000	27.800000
IGS_087	igs	trnI-GAU|trnL-CAA	trnI-GAU-trnL-CAA	88862	96465	0	7604	IRb	0.003808	241	255	82	300	no	0.712500	64	0.890625	0.003776	1.000000	48.100000
trnL-CAA	tRNA	trnL-CAA	trnL-CAA	96466	96546	-1	81	IRb	0.000000	0	0	63	290	no	0.000000	1	0.000000	0.000000	1.000000	23.500000
IGS_088	igs	trnL-CAA|ndhB	trnL-CAA-ndhB	96547	97107	0	561	IRb	0.002296	20	126	144	300	no	0.150000	20	0.600000	0.002281	1.000000	49.400000
ndhB	gene	ndhB	ndhB	97108	99319	-1	2212	IRb	0.001467	31	8	48	113	no	0.237500	30	0.633333	0.001467	1.000000	34.400000
IGS_089	igs	ndhB|rps7	ndhB-rps7	99320	99663	0	344	IRb	0.002943	11	0	12	175	no	0.062500	13	0.384615	0.002943	1.000000	27.100000
rps7	gene	rps7	rps7	99664	100131	-1	468	IRb	0.005994	14	4	36	300	no	0.087500	14	0.500000	0.005995	1.000000	34.100000
IGS_090	igs	rps7|rps12	rps7-rps12	100132	100184	0	53	IRb	0.000000	0	0	120	300	no	0.000000	1	0.000000	0.000000	1.000000	27.700000
rps12_part2	gene	rps12	rps12	100185	100978	-1	794	IRb	0.001382	9	0	173	300	no	0.025000	11	0.181818	0.001382	1.000000	40.500000
IGS_091	igs	rps12|trnV-GAC	rps12-trnV-GAC	100979	102855	0	1877	IRb	0.003087	67	54	11	300	no	0.525000	55	0.763636	0.003027	0.999467	44.300000
trnV-GAC	tRNA	trnV-GAC	trnV-GAC	102856	102927	1	72	IRb	0.000000	0	0	300	300	no	0.000000	1	0.000000	0.000000	1.000000	33.800000
IGS_092	igs	trnV-GAC|rrn16S	trnV-GAC-rrn16S	102928	103154	0	227	IRb	0.003077	25	9	300	300	no	0.062500	8	0.625000	0.003161	1.000000	53.700000
rrn16S	rRNA	rrn16S	rrn16S	103155	104645	1	1491	IRb	0.000963	13	0	300	19	no	0.112500	15	0.600000	0.000963	1.000000	30.100000
IGS_093	igs	rrn16S|trnE-UUC	rrn16S-trnE-UUC	104646	104937	0	292	IRb	0.002549	8	0	300	300	no	0.050000	9	0.444444	0.002549	1.000000	39.300000
trnE-UUC_part1	tRNA	trnE-UUC	trnE-UUC	104938	104969	1	32	IRb	0.000000	0	0	175	300	no	0.000000	1	0.000000	0.000000	1.000000	31.900000
trnE-UUC_part2	tRNA	trnE-UUC	trnE-UUC	105917	105956	1	40	IRb	0.000000	0	0	271	60	no	0.000000	1	0.000000	0.000000	1.000000	23.200000
IGS_096	igs	trnE-UUC|trnA-UGC	trnE-UUC-trnA-UGC	105957	106020	0	64	IRb	0.005014	4	0	300	300	no	0.025000	5	0.400000	0.005014	1.000000	44.300000
trnA-UGC_part1	tRNA	trnA-UGC	trnA-UGC	106021	106057	1	37	IRb	0.000000	0	0	3	300	no	0.000000	1	0.000000	0.000000	1.000000	19.000000
trnA-UGC_part2	tRNA	trnA-UGC	trnA-UGC	106867	106902	1	36	IRb	0.000000	0	0	300	300	no	0.000000	1	0.000000	0.000000	1.000000	33.800000
IGS_099	igs	trnA-UGC|rrn23S	trnA-UGC-rrn23S	106903	107058	0	156	IRb	0.001554	4	0	300	300	no	0.012500	5	0.200000	0.001554	1.000000	37.900000
rrn23S	rRNA	rrn23S	rrn23S	107059	109872	1	2814	IRb	0.000402	18	0	300	300	no	0.162500	18	0.722222	0.000402	1.000000	41.300000
IGS_100	igs	rrn23S|rrn4.5S	rrn23S-rrn4.5S	109873	109970	0	98	IRb	0.000759	2	0	300	300	no	0.012500	3	0.333333	0.000759	1.000000	36.900000
rrn4.5S	rRNA	rrn4.5S	rrn4.5S	109971	110073	1	103	IRb	0.000000	0	0	300	300	no	0.000000	1	0.000000	0.000000	1.000000	33.800000
IGS_101	igs	rrn4.5S|rrn5S	rrn4.5S-rrn5S	110074	110299	0	226	IRb	0.001325	5	7	300	137	no	0.037500	7	0.428571	0.001265	1.000000	36.800000
rrn5S	rRNA	rrn5S	rrn5S	110300	110418	1	119	IRb	0.003268	6	0	300	18	no	0.037500	5	0.600000	0.003268	1.000000	28.600000
IGS_102	igs	rrn5S|trnR-ACG	rrn5S-trnR-ACG	110419	110668	0	250	IRb	0.003035	10	14	300	122	no	0.112500	16	0.562500	0.003011	1.000000	42.500000
trnR-ACG	tRNA	trnR-ACG	trnR-ACG	110669	110742	1	74	IRb	0.000000	0	0	231	48	no	0.000000	1	0.000000	0.000000	1.000000	22.400000
IGS_103	igs	trnR-ACG|trnG-GCC	trnR-ACG-trnG-GCC	110743	110776	0	34	IRb	0.001452	1	0	300	14	no	0.000000	2	0.000000	0.001452	1.000000	24.100000
trnG-GCC	tRNA	trnG-GCC	trnG-GCC	110777	110842	-1	66	IRb	0.023186	14	10	300	10	no	0.100000	16	0.500000	0.023321	1.000000	50.400000
IGS_104	igs	trnG-GCC|trnN-GUU	trnG-GCC-trnN-GUU	110843	111173	0	331	IRb	0.006751	18	11	7	94	no	0.125000	20	0.500000	0.006769	1.000000	36.200000
trnN-GUU	tRNA	trnN-GUU	trnN-GUU	111174	111245	-1	72	IRb	0.000347	1	0	202	22	no	0.012500	2	0.500000	0.000347	1.000000	22.500000
IGS_105	igs	trnN-GUU|ndhF	trnN-GUU-ndhF	111246	112221	0	976	IRb	0.152110	608	400	274	23	yes	0.812500	72	0.902778	0.140765	0.959016	80.500000
ndhF	gene	ndhF	ndhF	112222	114483	1	2262	SSC	0.011248	214	25	17	94	no	0.700000	66	0.848485	0.011285	0.996463	55.900000
IGS_106	igs	ndhF|trnL-UAG	ndhF-trnL-UAG	114484	115550	0	1067	SSC	0.020706	188	338	102	101	yes	0.775000	68	0.911765	0.020661	0.991565	74.400000
trnL-UAG	tRNA	trnL-UAG	trnL-UAG	115551	115630	1	80	SSC	0.000000	0	0	87	21	no	0.000000	1	0.000000	0.000000	1.000000	20.300000
IGS_107	igs	trnL-UAG|ccsA	trnL-UAG-ccsA	115631	115729	0	99	SSC	0.021243	20	7	167	10	no	0.237500	28	0.678571	0.021655	0.989899	51.700000
ccsA	gene	ccsA	ccsA	115730	116689	1	960	SSC	0.009497	87	5	11	37	no	0.437500	47	0.744681	0.009546	0.994792	50.100000
IGS_108	igs	ccsA|ndhD	ccsA-ndhD	116690	116939	0	250	SSC	0.021703	40	27	105	45	no	0.437500	51	0.686275	0.021479	0.996000	58.400000
ndhD	gene	ndhD	ndhD	116940	118439	-1	1500	SSC	0.007671	113	0	7	66	no	0.637500	61	0.836066	0.007671	1.000000	50.300000
IGS_109	igs	ndhD|psaC	ndhD-psaC	118440	118573	0	134	SSC	0.009017	10	5	61	36	no	0.075000	19	0.315789	0.009069	0.992537	40.600000
psaC	gene	psaC	psaC	118574	118819	-1	246	SSC	0.006471	11	0	66	1	no	0.075000	14	0.428571	0.006471	1.000000	28.700000
IGS_110	igs	psaC|ndhE	psaC-ndhE	118820	119077	0	258	SSC	0.013371	32	0	38	99	no	0.162500	29	0.448276	0.013371	1.000000	43.200000
ndhE	gene	ndhE	ndhE	119078	119383	-1	306	SSC	0.006097	16	0	49	62	no	0.112500	18	0.500000	0.006097	1.000000	33.900000
IGS_111	igs	ndhE|ndhG	ndhE-ndhG	119384	119601	0	218	SSC	0.020224	42	0	68	66	no	0.312500	39	0.641026	0.020224	1.000000	51.200000
ndhG	gene	ndhG	ndhG	119602	120132	-1	531	SSC	0.006552	38	0	26	1	no	0.175000	29	0.482759	0.006552	1.000000	38.800000
IGS_112	igs	ndhG|ndhI	ndhG-ndhI	120133	120506	0	374	SSC	0.016794	63	34	114	8	no	0.500000	54	0.740741	0.017077	0.986631	56.000000
ndhI	gene	ndhI	ndhI	120507	121004	-1	498	SSC	0.008179	45	0	23	2	no	0.312500	38	0.657895	0.008179	1.000000	43.900000
IGS_113	igs	ndhI|ndhA	ndhI-ndhA	121005	121090	0	86	SSC	0.018185	15	0	12	11	no	0.087500	18	0.388889	0.018185	1.000000	41.900000
ndhA	gene	ndhA	ndhA	121091	123275	-1	2185	SSC	0.009088	172	53	24	58	no	0.650000	63	0.825397	0.009011	1.000000	54.400000
IGS_114	igs	ndhA|ndhH	ndhA-ndhH	123276	123276	0	1	SSC	0.000000	0	0	33	57	no	0.000000	1	0.000000	NA	1.000000	21.200000
ndhH	gene	ndhH	ndhH	123277	124458	-1	1182	SSC	0.007960	85	0	34	29	no	0.425000	48	0.708333	0.007960	1.000000	47.700000
IGS_115	igs	ndhH|trnN-GUU	ndhH-trnN-GUU	124459	131867	0	7409	SSC	0.045257	1964	1081	53	274	yes	0.937500	77	0.974026	0.041658	0.983803	78.400000
trnN-GUU	tRNA	trnN-GUU	trnN-GUU	131868	131939	1	72	IRa	0.000347	1	0	22	202	no	0.012500	2	0.500000	0.000347	1.000000	22.500000
IGS_116	igs	trnN-GUU|trnG-GCC	trnN-GUU-trnG-GCC	131940	132270	0	331	IRa	0.006751	18	10	94	7	no	0.125000	20	0.500000	0.006769	1.000000	35.800000
trnG-GCC	tRNA	trnG-GCC	trnG-GCC	132271	132336	1	66	IRa	0.023222	14	10	10	300	no	0.100000	16	0.500000	0.023276	1.000000	50.500000
IGS_117	igs	trnG-GCC|trnR-ACG	trnG-GCC-trnR-ACG	132337	132370	0	34	IRa	0.001452	1	0	14	300	no	0.000000	2	0.000000	0.001452	1.000000	24.100000
trnR-ACG	tRNA	trnR-ACG	trnR-ACG	132371	132444	-1	74	IRa	0.000000	0	0	48	231	no	0.000000	1	0.000000	0.000000	1.000000	22.400000
IGS_118	igs	trnR-ACG|rrn5S	trnR-ACG-rrn5S	132445	132694	0	250	IRa	0.003035	10	14	122	300	no	0.112500	16	0.562500	0.003011	1.000000	42.500000
rrn5S	rRNA	rrn5S	rrn5S	132695	132813	-1	119	IRa	0.003268	6	0	18	300	no	0.037500	5	0.600000	0.003268	1.000000	28.600000
IGS_119	igs	rrn5S|rrn4.5S	rrn5S-rrn4.5S	132814	133039	0	226	IRa	0.001325	5	7	137	300	no	0.037500	7	0.428571	0.001265	1.000000	36.800000
rrn4.5S	rRNA	rrn4.5S	rrn4.5S	133040	133142	-1	103	IRa	0.000000	0	0	300	300	no	0.000000	1	0.000000	0.000000	1.000000	33.800000
IGS_120	igs	rrn4.5S|rrn23S	rrn4.5S-rrn23S	133143	133240	0	98	IRa	0.000759	2	0	300	300	no	0.012500	3	0.333333	0.000759	1.000000	36.900000
rrn23S	rRNA	rrn23S	rrn23S	133241	136054	-1	2814	IRa	0.000402	18	0	300	300	no	0.162500	18	0.722222	0.000402	1.000000	41.300000
IGS_121	igs	rrn23S|trnA-UGC	rrn23S-trnA-UGC	136055	136210	0	156	IRa	0.001554	4	0	300	300	no	0.012500	5	0.200000	0.001554	1.000000	37.900000
trnA-UGC_part2	tRNA	trnA-UGC	trnA-UGC	136211	136246	-1	36	IRa	0.000000	0	0	300	300	no	0.000000	1	0.000000	0.000000	1.000000	33.800000
trnA-UGC_part1	tRNA	trnA-UGC	trnA-UGC	137056	137092	-1	37	IRa	0.000000	0	0	300	3	no	0.000000	1	0.000000	0.000000	1.000000	19.000000
IGS_124	igs	trnA-UGC|trnE-UUC	trnA-UGC-trnE-UUC	137093	137156	0	64	IRa	0.005014	4	0	300	300	no	0.025000	5	0.400000	0.005014	1.000000	44.300000
trnE-UUC_part2	tRNA	trnE-UUC	trnE-UUC	137157	137196	-1	40	IRa	0.000000	0	0	60	271	no	0.000000	1	0.000000	0.000000	1.000000	23.200000
trnE-UUC_part1	tRNA	trnE-UUC	trnE-UUC	138144	138175	-1	32	IRa	0.000000	0	0	300	175	no	0.000000	1	0.000000	0.000000	1.000000	31.900000
IGS_127	igs	trnE-UUC|rrn16S	trnE-UUC-rrn16S	138176	138467	0	292	IRa	0.002549	8	0	300	300	no	0.050000	9	0.444444	0.002549	1.000000	39.300000
rrn16S	rRNA	rrn16S	rrn16S	138468	139958	-1	1491	IRa	0.000963	13	0	19	300	no	0.112500	15	0.600000	0.000963	1.000000	30.100000
IGS_128	igs	rrn16S|trnV-GAC	rrn16S-trnV-GAC	139959	140185	0	227	IRa	0.003077	25	9	300	300	no	0.062500	8	0.625000	0.003161	1.000000	53.700000
trnV-GAC	tRNA	trnV-GAC	trnV-GAC	140186	140257	-1	72	IRa	0.000000	0	0	300	300	no	0.000000	1	0.000000	0.000000	1.000000	33.800000
IGS_129	igs	trnV-GAC|rps12	trnV-GAC-rps12	140258	142134	0	1877	IRa	0.003039	67	58	300	11	no	0.537500	56	0.767857	0.002959	0.999467	44.800000
rps12_part2	gene	rps12	rps12	142135	142928	1	794	IRa	0.001382	9	0	300	173	no	0.025000	11	0.181818	0.001382	1.000000	40.500000
IGS_130	igs	rps12|rps7	rps12-rps7	142929	142981	0	53	IRa	0.000000	0	0	300	120	no	0.000000	1	0.000000	0.000000	1.000000	27.700000
rps7	gene	rps7	rps7	142982	143449	1	468	IRa	0.005994	14	4	300	36	no	0.087500	14	0.500000	0.005995	1.000000	34.100000
IGS_131	igs	rps7|ndhB	rps7-ndhB	143450	143793	0	344	IRa	0.002943	11	0	175	12	no	0.062500	13	0.384615	0.002943	1.000000	27.100000
ndhB	gene	ndhB	ndhB	143794	146005	1	2212	IRa	0.001467	31	8	113	48	no	0.237500	30	0.633333	0.001467	1.000000	34.400000
IGS_132	igs	ndhB|trnL-CAA	ndhB-trnL-CAA	146006	146566	0	561	IRa	0.002292	20	120	300	144	no	0.150000	20	0.600000	0.002286	1.000000	49.400000
trnL-CAA	tRNA	trnL-CAA	trnL-CAA	146567	146647	1	81	IRa	0.000000	0	0	300	63	no	0.000000	1	0.000000	0.000000	1.000000	23.500000
IGS_133	igs	trnL-CAA|trnI-GAU	trnL-CAA-trnI-GAU	146648	154251	0	7604	IRa	0.003769	247	269	300	82	no	0.675000	63	0.857143	0.003733	1.000000	47.700000
trnI-GAU	tRNA	trnI-GAU	trnI-GAU	154252	154325	1	74	IRa	0.000676	2	23	90	8	no	0.037500	4	0.750000	0.000680	1.000000	29.900000
IGS_134	igs	trnI-GAU|trnH-GUG	trnI-GAU-trnH-GUG	154326	154611	0	286	IRa	0.005893	14251	11123	164	75	no	0.975000	79	0.987342	0.010905	0.995965	63.800000