primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AAAGCCGAGTACTCTACCGT TTCCTTGAAAAAGGCGCTCA 20 20 50.0 45.0 58.2 58.3 20.3 7.6 0.482065 4384 5195 937-949 1.000000 77.4 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AAGCCGAGTACTCTACCGTT TTCCTTGAAAAAGGCGCTCA 20 20 50.0 45.0 58.2 58.3 20.3 7.6 0.482065 4384 5195 936-948 1.000000 77.4 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 TCAGTCGTGGTCTTCCAAAC TTCCTTGAAAAAGGCGCTCA 20 20 50.0 45.0 57.8 58.3 0.0 7.6 0.547945 4384 5195 1021-1033 1.000000 76.8 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 CAGTCGTGGTCTTCCAAACT TTCCTTGAAAAAGGCGCTCA 20 20 50.0 45.0 57.8 58.3 0.0 7.6 0.554139 4384 5195 1020-1032 1.000000 76.7 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 TCCTAGCCGCACTTAAAAGC TTCCTTGAAAAAGGCGCTCA 20 20 50.0 45.0 58.3 58.3 0.0 7.6 0.579483 4384 5195 952-964 1.000000 76.6 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6305 7256 1009-1025 1.000000 80.5 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 CGGATCGTGTCCTTCAAGTC GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.4 58.1 7.8 16.9 0.445953 6305 7256 1024-1040 1.000000 78.6 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 GGATCGTGTCCTTCAAGTCG GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.4 58.1 2.9 16.9 0.445953 6305 7256 1023-1039 1.000000 78.6 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 CCAAGAGCACCTTCATTCCT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.5 58.1 0.0 16.9 0.579996 6305 7256 1080-1096 1.000000 77.4 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AAGTCGCACGTTGCTTTCTA TTCGGAGGTTCGAATCCTTC 20 20 45.0 50.0 58.1 57.3 8.1 16.9 0.806797 6305 7256 1013-1029 1.000000 75.7 psbM-trnD-GUC_p1 psbM-trnD-GUC 1 GGAACCAAAATGAACAGTGCA TTCAATAGGCAAGAGCACCG 21 20 42.9 50.0 57.5 58.3 0.0 0.0 1.713302 10918 11564 766-766 1.000000 66.8 psbM-trnD-GUC_p2 psbM-trnD-GUC 2 AGTAGAAAAGCGGTAGGAACC TTCAATAGGCAAGAGCACCG 21 20 47.6 50.0 57.4 58.3 0.0 0.0 1.868756 10918 11564 781-781 1.000000 65.6 psbM-trnD-GUC_p3 psbM-trnD-GUC 3 AGGAACCAAAATGAACAGTGC TTCAATAGGCAAGAGCACCG 21 20 42.9 50.0 57.3 58.3 0.0 0.0 1.995605 10918 11564 767-767 1.000000 64.6 psbM-trnD-GUC_p4 psbM-trnD-GUC 4 ACCAAAATGAACAGTGCAGT TTCAATAGGCAAGAGCACCG 20 20 40.0 50.0 56.1 58.3 0.0 0.0 2.201015 10918 11564 763-763 1.000000 62.9 psbM-trnD-GUC_p5 psbM-trnD-GUC 5 GAACCAAAATGAACAGTGCAGT TTCAATAGGCAAGAGCACCG 22 20 40.9 50.0 58.0 58.3 0.0 0.0 2.307798 10918 11564 765-765 1.000000 62.1 trnE-UUC-rpoB_p1 trnE-UUC-rpoB 1 GGGACTTGAACCCTCGTTTT AGTTCTTCTGTCAAACCCTGA 20 21 50.0 42.9 58.0 56.8 0.0 0.0 2.237066 12015 12951 1078-1080 1.000000 62.8 trnE-UUC-rpoB_p2 trnE-UUC-rpoB 2 TAACCACTGGACCATAGGGG AGTTCTTCTGTCAAACCCTGA 20 21 55.0 42.9 58.1 56.8 14.8 0.0 2.326325 12015 12951 1037-1039 1.000000 62.1 trnE-UUC-rpoB_p3 trnE-UUC-rpoB 3 CCCTCGTTTTCTCCGTGAAA AGTTCTTCTGTCAAACCCTGA 20 21 50.0 42.9 58.1 56.8 0.0 0.0 2.340425 12015 12951 1068-1070 1.000000 61.9 trnE-UUC-rpoB_p4 trnE-UUC-rpoB 4 TTGAACCCTCGTTTTCTCCG AGTTCTTCTGTCAAACCCTGA 20 21 50.0 42.9 58.1 56.8 0.0 0.0 2.340425 12015 12951 1073-1075 1.000000 61.9 trnE-UUC-rpoB_p5 trnE-UUC-rpoB 5 GGGACTTGAACCCTCGTTTT TCAAACCCTGATCAATGAACCT 20 22 50.0 40.9 58.0 57.6 0.0 0.0 2.409970 12015 12951 1068-1070 1.000000 61.4 atpA_p1 atpA 1 TTGGCATATTGGGGACGATG ATCCGAAACGCTTGAGTACC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.026116 28194 29720 1688-1690 1.000000 79.9 atpA_p2 atpA 2 TTGGCATATTGGGGACGATG TGAATCCGAAACGCTTGAGT 20 20 50.0 45.0 58.0 57.8 0.0 0.0 0.183963 28194 29720 1691-1693 1.000000 78.6 atpA_p3 atpA 3 TTGGCATATTGGGGACGATG CGAAACGCTTGAGTACCCTT 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.228140 28194 29720 1685-1687 1.000000 78.3 atpA_p4 atpA 4 GGCATATTGGGGACGATGAA ATCCGAAACGCTTGAGTACC 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.276323 28194 29720 1686-1688 1.000000 77.9 atpA_p5 atpA 5 GGCATATTGGGGACGATGAA TGAATCCGAAACGCTTGAGT 20 20 50.0 45.0 57.7 57.8 0.0 0.0 0.434170 28194 29720 1689-1691 1.000000 76.6 trnG-GCC-trnfM-CAU_p1 trnG-GCC-trnfM-CAU 1 GAACGAAACAAAACGCGGAT GGGTAGAGCAGTTTGGTAGC 20 20 45.0 55.0 58.0 58.0 12.5 0.0 0.052503 35945 36147 358-376 1.000000 83.8 trnG-GCC-trnfM-CAU_p2 trnG-GCC-trnfM-CAU 2 GAACGAAACAAAACGCGGAT CTTGAGGTCACGGGTTCAAA 20 20 45.0 50.0 58.0 58.0 12.5 4.2 0.065121 35945 36147 322-340 1.000000 83.7 trnG-GCC-trnfM-CAU_p3 trnG-GCC-trnfM-CAU 3 GAACGAAACAAAACGCGGAT TTCAGTTCTTCTCTTCGGCG 20 20 45.0 50.0 58.0 57.9 12.5 0.0 0.092908 35945 36147 380-398 1.000000 83.5 trnG-GCC-trnfM-CAU_p4 trnG-GCC-trnfM-CAU 4 GAACGAAACAAAACGCGGAT GTCACGGGTTCAAATCCTGT 20 20 45.0 50.0 58.0 58.1 12.5 0.0 0.134705 35945 36147 316-334 1.000000 83.2 trnG-GCC-trnfM-CAU_p5 trnG-GCC-trnfM-CAU 5 TCTTTGCCAAGGAGAAGACG GGGTAGAGCAGTTTGGTAGC 20 20 50.0 55.0 57.8 58.0 0.0 0.0 0.195421 35945 36147 317-335 1.000000 82.7 ndhC-trnC-ACA_p1 ndhC-trnC-ACA 1 CGGTCCTTTGTTACTCGGAG CCGAGAAAGTCTACGGTTCG 20 20 55.0 55.0 58.0 58.1 2.8 0.0 0.115363 50051 51209 1281-1309 1.000000 81.5 ndhC-trnC-ACA_p2 ndhC-trnC-ACA 2 GGTCCTTTGTTACTCGGAGC CCGAGAAAGTCTACGGTTCG 20 20 55.0 55.0 58.3 58.1 4.6 0.0 0.384313 50051 51209 1280-1308 1.000000 79.3 ndhC-trnC-ACA_p3 ndhC-trnC-ACA 3 ACTCGGAGCTAAAAATCCCG CCGAGAAAGTCTACGGTTCG 20 20 50.0 55.0 57.7 58.1 4.6 0.0 0.418656 50051 51209 1269-1297 1.000000 79.1 ndhC-trnC-ACA_p4 ndhC-trnC-ACA 4 TTCCGGTCCTTTGTTACTCG CCGAGAAAGTCTACGGTTCG 20 20 50.0 55.0 57.6 58.1 0.0 0.0 0.551420 50051 51209 1284-1312 1.000000 78.0 ndhC-trnC-ACA_p5 ndhC-trnC-ACA 5 CGGTCCTTTGTTACTCGGAG GTTCGAGTCCGTATAGCCCT 20 20 55.0 55.0 58.0 58.7 2.8 0.0 0.691179 50051 51209 1266-1294 1.000000 76.9 accD_p1 accD 1 TTTTCAATACTCACACTCTTTTT TGTCAACCCCATTCGTCTAA 23 20 26.1 45.0 52.8 56.5 0.0 0.0 9.748806 56927 58366 1609-1623 1.000000 41.2 accD_p2 accD 2 TTTTTCAATACTCACACTCTTTT TGTCAACCCCATTCGTCTAA 23 20 26.1 45.0 52.8 56.5 0.0 0.0 9.748806 56927 58366 1610-1624 1.000000 41.2 accD_p3 accD 3 TTTTTCAATACTCACACTCTTTTT TGTCAACCCCATTCGTCTAA 24 20 25.0 45.0 53.6 56.5 0.0 0.0 9.934798 56927 58366 1610-1624 1.000000 41.2 accD_p4 accD 4 TTTTCAATACTCACACTCTTTTT ATGTCAACCCCATTCGTCTA 23 20 26.1 45.0 52.8 56.2 0.0 0.0 9.982287 56927 58366 1610-1624 1.000000 41.2 accD_p5 accD 5 TTTTCAATACTCACACTCTTTTT TATGTCAACCCCATTCGTCT 23 20 26.1 45.0 52.8 56.2 0.0 0.0 9.982287 56927 58366 1611-1625 1.000000 41.2 ycf4-cemA_p1 ycf4-cemA 1 GAGCCATTCCATTGACTCGT GAGAAATCCACCAGGGCAAA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.106483 60116 60867 932-934 1.000000 80.1 ycf4-cemA_p2 ycf4-cemA 2 GAGCCATTCCATTGACTCGT CCACCAATGAGTAACCCAGG 20 20 50.0 55.0 58.0 57.9 0.0 0.0 0.158609 60116 60867 976-978 1.000000 79.6 ycf4-cemA_p3 ycf4-cemA 3 CTCCACGGGAAATGGAACAA GAGAAATCCACCAGGGCAAA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.172357 60116 60867 896-898 1.000000 79.6 ycf4-cemA_p4 ycf4-cemA 4 TTGGCCTATTTCTTGCGTGT GAGAAATCCACCAGGGCAAA 20 20 45.0 50.0 58.1 58.1 3.3 0.0 0.172357 60116 60867 864-866 1.000000 79.6 ycf4-cemA_p5 ycf4-cemA 5 TTGGCCTATTTCTTGCGTGT CCACCAATGAGTAACCCAGG 20 20 45.0 55.0 58.1 57.9 3.3 0.0 0.224484 60116 60867 908-910 1.000000 79.2 clpP1_p1 clpP1 1 AAGTCGGCAGGGGTAATTTC GGCTTTGTTACGTTTCCACA 20 20 50.0 45.0 57.9 56.9 0.0 0.0 1.263647 69566 71573 2125-2133 1.000000 70.3 clpP1_p2 clpP1 2 GAAAGTCGGCAGGGGTAATT GGCTTTGTTACGTTTCCACA 20 20 50.0 45.0 57.9 56.9 0.0 0.0 1.263647 69566 71573 2127-2135 1.000000 70.3 clpP1_p3 clpP1 3 TATGAAAGTCGGCAGGGGTA GGCTTTGTTACGTTTCCACA 20 20 50.0 45.0 58.1 56.9 0.0 0.0 1.270657 69566 71573 2130-2138 1.000000 70.2 clpP1_p4 clpP1 4 GTCGGCAGGGGTAATTTCAA GGCTTTGTTACGTTTCCACA 20 20 50.0 45.0 58.2 56.9 0.0 0.0 1.310391 69566 71573 2123-2131 1.000000 69.9 clpP1_p5 clpP1 5 AAGTCGGCAGGGGTAATTTC AGGCTTTGTTACGTTTCCACA 20 21 50.0 42.9 57.9 58.4 0.0 0.0 1.478475 69566 71573 2126-2134 1.000000 68.6 psbB_p1 psbB 1 ATCCACTAAAGAGGGGGTCC TCCCGGATAAAGAAAGAGCA 20 20 55.0 45.0 58.1 56.2 0.0 0.7 1.865889 72029 73555 1724-1736 1.000000 65.8 psbB_p2 psbB 2 ATCCACTAAAGAGGGGGTCC TCCCGGATAAAGAAAGAGCAA 20 21 55.0 42.9 58.1 57.0 0.0 0.7 2.098244 72029 73555 1724-1736 1.000000 64.0 psbB_p3 psbB 3 CCACTAAAGAGGGGGTCCAT TCCCGGATAAAGAAAGAGCA 20 20 55.0 45.0 58.4 56.2 0.0 0.7 2.164093 72029 73555 1722-1734 1.000000 63.4 psbB_p4 psbB 4 ATCCACTAAAGAGGGGGTCC CCCGGATAAAGAAAGAGCAAGA 20 22 55.0 45.5 58.1 58.1 0.0 0.7 2.231391 72029 73555 1723-1735 1.000000 62.9 psbB_p5 psbB 5 ATCCACTAAAGAGGGGGTCC TCCCGGATAAAGAAAGAGCAAG 20 22 55.0 45.5 58.1 58.1 0.0 0.7 2.231391 72029 73555 1724-1736 1.000000 62.9 petB_p1 petB 1 CCCCCAAGTCCTAGCTTTTC ATCGTTCCTACCCCAAGTGA 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.183288 74484 75880 1565-1575 1.000000 79.5 petB_p2 petB 2 CCCCCAAGTCCTAGCTTTTC TCGTTCCTACCCCAAGTGAT 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.183288 74484 75880 1564-1574 1.000000 79.5 petB_p3 petB 3 TTTTGGTAGTTCGACCGTGG ATCGTTCCTACCCCAAGTGA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.184546 74484 75880 1509-1513 1.000000 78.8 petB_p4 petB 4 TTTTGGTAGTTCGACCGTGG TCGTTCCTACCCCAAGTGAT 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.184546 74484 75880 1508-1512 1.000000 78.8 petB_p5 petB 5 GGTAGTTCGACCGTGGAATT TCGTTCCTACCCCAAGTGAT 20 20 50.0 50.0 57.6 58.1 0.0 0.0 0.428189 74484 75880 1504-1508 1.000000 76.8 ndhF-rpl32_p1 ndhF-rpl32 1 GTTGCCGTCGGAAAAAGAAG ACAAAGCTTTTAACGCTGCC 20 20 50.0 45.0 58.0 57.9 17.5 9.5 0.166615 110880 111919 1218-1235 1.000000 80.7 ndhF-rpl32_p2 ndhF-rpl32 2 TGCCGTCGGAAAAAGAAGAA ACAAAGCTTTTAACGCTGCC 20 20 45.0 45.0 58.0 57.9 17.5 9.5 0.177905 110880 111919 1216-1233 1.000000 80.6 ndhF-rpl32_p3 ndhF-rpl32 3 TTGCCGTCGGAAAAAGAAGA ACAAAGCTTTTAACGCTGCC 20 20 45.0 45.0 58.0 57.9 17.5 9.5 0.177905 110880 111919 1217-1234 1.000000 80.6 ndhF-rpl32_p4 ndhF-rpl32 4 GTTGCCGTCGGAAAAAGAAG GCCCAATACCCCTTCCTTTT 20 20 50.0 50.0 58.0 57.8 17.5 0.0 0.280113 110880 111919 1201-1218 1.000000 79.8 ndhF-rpl32_p5 ndhF-rpl32 5 TGCCGTCGGAAAAAGAAGAA GCCCAATACCCCTTCCTTTT 20 20 45.0 50.0 58.0 57.8 17.5 0.0 0.291402 110880 111919 1199-1216 1.000000 79.7 ndhH_p1 ndhH 1 GCATCCATATGATCCCATAGACC CGCTTTCAGCAATTCATGGA 23 20 47.8 45.0 58.3 57.1 3.7 0.0 4.213102 120582 121763 1312-1312 1.000000 46.5 ndhH_p2 ndhH 2 GCATCCATATGATCCCATAGACC TCGCTTTCAGCAATTCATGG 23 20 47.8 45.0 58.3 57.1 3.7 0.0 4.213102 120582 121763 1313-1313 1.000000 46.5 ndhH_p3 ndhH 3 TCCATATGATCCCATAGACCTCT CGCTTTCAGCAATTCATGGA 23 20 43.5 45.0 57.4 57.1 3.7 0.0 4.484434 120582 121763 1309-1309 1.000000 44.3 ndhH_p4 ndhH 4 TCCATATGATCCCATAGACCTCT TCGCTTTCAGCAATTCATGG 23 20 43.5 45.0 57.4 57.1 3.7 0.0 4.484434 120582 121763 1310-1310 1.000000 44.3 ndhH_p5 ndhH 5 GCATCCATATGATCCCATAGACC CGCTTTCAGCAATTCATGGAA 23 21 47.8 42.9 58.3 57.8 3.7 0.0 4.508032 120582 121763 1312-1312 1.000000 44.1 rps15-ycf1_p1 rps15-ycf1 1 ACTTGAAATTCAACAGATCCTCT CGCTTGAGTATGTTAAGGAT 23 20 34.8 40.0 55.8 52.8 4.0 0.0 10.338209 122133 122531 518-523 1.000000 41.1 rps15-ycf1_p2 rps15-ycf1 2 CAGATCCTCTGTTTTCTTTGT CGCTTGAGTATGTTAAGGAT 21 20 38.1 40.0 53.7 52.8 0.0 0.0 10.434449 122133 122531 505-510 1.000000 41.1 rps15-ycf1_p3 rps15-ycf1 3 AGTCTCCGTATCTTATTGGT CGCTTGAGTATGTTAAGGAT 20 20 40.0 40.0 52.9 52.8 0.0 0.0 10.327644 122133 122531 548-553 1.000000 41.0 rps15-ycf1_p4 rps15-ycf1 4 AAGTCTCCGTATCTTATTGGT CGCTTGAGTATGTTAAGGAT 21 20 38.1 40.0 53.8 52.8 0.0 0.0 10.394639 122133 122531 549-554 1.000000 41.0 rps15-ycf1_p5 rps15-ycf1 5 AGTAAGTCTCCGTATCTTATTGGT CGCTTGAGTATGTTAAGGAT 24 20 37.5 40.0 56.7 52.8 0.0 0.0 10.466162 122133 122531 552-557 1.000000 41.0 ycf1_p1 ycf1 1 GGTCTTCTTCTTCGCCCATT ACATTGGATCTAAGAAGTCCC 20 21 50.0 42.9 57.9 54.7 0.0 0.0 4.414757 126782 126901 171-204 1.000000 47.2 ycf1_p2 ycf1 2 GGTCTTCTTCTTCGCCCATT AGTACATTGGATCTAAGAAGTCCC 20 24 50.0 41.7 57.9 57.5 0.0 0.0 4.602642 126782 126901 174-207 1.000000 45.7 ycf1_p3 ycf1 3 TCAAGGTCTTCTTCTTCGCC ACATTGGATCTAAGAAGTCCC 20 21 50.0 42.9 57.5 54.7 0.0 0.0 4.756780 126782 126901 175-208 1.000000 44.5 ycf1_p4 ycf1 4 CAAGGTCTTCTTCTTCGCCC ACATTGGATCTAAGAAGTCCC 20 21 55.0 42.9 58.6 54.7 0.0 0.0 4.855613 126782 126901 174-207 1.000000 43.7 ycf1_p5 ycf1 5 TCAAGGTCTTCTTCTTCGCC AGTACATTGGATCTAAGAAGTCCC 20 24 50.0 41.7 57.5 57.5 0.0 0.0 4.944665 126782 126901 178-211 1.000000 42.9