feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score matK gene matK matK 5 1546 -1 1542 LSC 0.008464 13 6 5 67 no 1.000000 2 1.000000 NA 0.996109 49.300000 IGS_001 igs matK|trnQ-UUG matK-trnQ-UUG 1547 2150 0 604 LSC 0.112245 66 16 26 87 yes 1.000000 2 1.000000 NA 0.973510 83.300000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 2151 2222 -1 72 LSC 0.000000 0 0 33 15 no 0.000000 1 0.000000 NA 1.000000 19.900000 IGS_002 igs trnQ-UUG|rps2 trnQ-UUG-rps2 2223 2786 0 564 LSC 0.041176 21 54 105 230 yes 1.000000 2 1.000000 NA 0.904255 77.600000 rps2 gene rps2 rps2 2787 3494 -1 708 LSC 0.005650 4 0 17 153 no 1.000000 2 1.000000 NA 1.000000 48.300000 IGS_003 igs rps2|trnC-GCA rps2-trnC-GCA 3495 4492 0 998 LSC 0.014403 14 26 4 84 no 1.000000 2 1.000000 NA 0.973948 54.800000 trnC-GCA tRNA trnC-GCA trnC-GCA 4493 4563 1 71 LSC 0.000000 0 0 9 13 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_004 igs trnC-GCA|trnD-GUC trnC-GCA-trnD-GUC 4564 4656 0 93 LSC 0.011364 1 5 80 0 no 1.000000 2 1.000000 NA 0.946237 48.700000 trnD-GUC tRNA trnD-GUC trnD-GUC 4657 4730 -1 74 LSC 0.013514 1 0 79 44 no 1.000000 2 1.000000 NA 1.000000 48.600000 IGS_005 igs trnD-GUC|trnfM-CAU trnD-GUC-trnfM-CAU 4731 6110 0 1380 LSC 0.093264 126 29 73 124 yes 1.000000 2 1.000000 NA 0.978986 85.200000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 6111 6184 -1 74 LSC 0.000000 0 0 49 50 no 0.000000 1 0.000000 NA 1.000000 22.400000 IGS_006 igs trnfM-CAU|rps14 trnfM-CAU-rps14 6185 6366 0 182 LSC 0.013072 2 29 123 182 no 1.000000 2 1.000000 NA 0.840659 55.700000 rps14 gene rps14 rps14 6367 6669 -1 303 LSC 0.019802 6 0 130 16 no 1.000000 2 1.000000 NA 1.000000 50.100000 IGS_007 igs rps14|rps4 rps14-rps4 6670 7772 0 1103 LSC 0.035267 31 224 5 1 no 1.000000 2 1.000000 NA 0.796917 63.700000 rps4 gene rps4 rps4 7773 8369 -1 597 LSC 0.008375 5 0 128 185 no 1.000000 2 1.000000 NA 1.000000 58.100000 IGS_008 igs rps4|trnF-GAA rps4-trnF-GAA 8370 8992 0 623 LSC 0.026801 16 26 56 51 no 1.000000 2 1.000000 NA 0.958266 66.900000 trnF-GAA tRNA trnF-GAA trnF-GAA 8993 9065 1 73 LSC 0.013699 1 0 1 162 no 1.000000 2 1.000000 NA 1.000000 45.500000 IGS_009 igs trnF-GAA|accD trnF-GAA-accD 9066 9806 0 741 LSC 0.012228 9 5 21 48 no 1.000000 2 1.000000 NA 0.993252 53.000000 accD gene accD accD 9807 11357 1 1551 LSC 0.011605 18 0 18 86 no 1.000000 2 1.000000 NA 1.000000 51.700000 IGS_010 igs accD|rps18 accD-rps18 11358 14676 0 3319 LSC 0.056254 161 457 30 4 yes 1.000000 2 1.000000 NA 0.862308 71.400000 rps18 gene rps18 rps18 14677 14952 1 276 LSC 0.014493 4 0 203 25 no 1.000000 2 1.000000 NA 1.000000 47.700000 IGS_011 igs rps18|rpl20 rps18-rpl20 14953 15327 0 375 LSC 0.065637 17 116 9 146 no 1.000000 2 1.000000 NA 0.690667 65.500000 rpl20 gene rpl20 rpl20 15328 15687 -1 360 LSC 0.002778 1 0 32 10 no 1.000000 2 1.000000 NA 1.000000 41.100000 IGS_012 igs rpl20|rps12 rpl20-rps12 15688 16679 0 992 LSC 0.038382 37 28 213 84 yes 1.000000 2 1.000000 NA 0.971774 74.700000 rps12_part1 gene rps12 rps12 16680 16793 -1 114 LSC 0.008772 1 0 46 18 no 1.000000 2 1.000000 NA 1.000000 43.900000 IGS_013 igs rps12|clpP rps12-clpP 16794 17052 0 259 LSC 0.030888 8 0 29 300 no 1.000000 2 1.000000 NA 1.000000 57.400000 clpP gene clpP clpP 17053 19329 -1 2277 LSC 0.016844 38 21 19 90 no 1.000000 2 1.000000 NA 0.990777 54.100000 IGS_014 igs clpP|rps11 clpP-rps11 19330 20028 0 699 LSC 0.020588 14 19 183 39 no 1.000000 2 1.000000 NA 0.972818 61.100000 rps11 gene rps11 rps11 20029 20457 -1 429 LSC 0.009324 4 0 15 61 no 1.000000 2 1.000000 NA 1.000000 46.700000 IGS_015 igs rps11|rpl36 rps11-rpl36 20458 20463 0 6 LSC 0.000000 0 0 83 55 no 0.000000 1 0.000000 NA 1.000000 22.900000 rpl36 gene rpl36 rpl36 20464 20577 -1 114 LSC 0.008772 1 0 89 65 no 1.000000 2 1.000000 NA 1.000000 47.400000 IGS_016 igs rpl36|infA rpl36-infA 20578 20749 0 172 LSC 0.035088 6 1 58 129 no 1.000000 2 1.000000 NA 0.994186 62.600000 infA gene infA infA 20750 20986 -1 237 LSC 0.004219 1 0 16 108 no 1.000000 2 1.000000 NA 1.000000 41.100000 IGS_017 igs infA|rps8 infA-rps8 20987 21193 0 207 LSC 0.024155 5 0 107 92 no 1.000000 2 1.000000 NA 1.000000 58.300000 rps8 gene rps8 rps8 21194 21583 -1 390 LSC 0.010256 4 0 60 5 no 1.000000 2 1.000000 NA 1.000000 45.600000 IGS_018 igs rps8|rpl14 rps8-rpl14 21584 21944 0 361 LSC 0.034375 11 41 102 111 no 1.000000 2 1.000000 NA 0.886427 68.800000 rpl14 gene rpl14 rpl14 21945 22313 -1 369 LSC 0.005435 2 1 155 18 no 1.000000 2 1.000000 NA 0.997290 43.700000 IGS_019 igs rpl14|rpl16 rpl14-rpl16 22314 22682 0 369 LSC 0.127596 43 32 17 11 yes 1.000000 2 1.000000 NA 0.913279 78.600000 rpl16 gene rpl16 rpl16 22683 24570 -1 1888 LSC 0.040064 75 16 15 26 no 1.000000 2 1.000000 NA 0.991525 67.900000 IGS_020 igs rpl16|rps3 rpl16-rps3 24571 24697 0 127 LSC 0.055118 7 0 47 126 no 1.000000 2 1.000000 NA 1.000000 70.400000 rps3 gene rps3 rps3 24698 25360 -1 663 LSC 0.004525 3 0 4 34 no 1.000000 2 1.000000 NA 1.000000 46.700000 IGS_021 igs rps3|rpl22 rps3-rpl22 25361 25424 0 64 LSC 0.031250 2 0 124 26 no 1.000000 2 1.000000 NA 1.000000 57.400000 rpl22 gene rpl22 rpl22 25425 25780 -1 356 LSC 0.011594 4 11 15 50 no 1.000000 2 1.000000 NA 0.969101 49.400000 IGS_022 igs rpl22|rps19 rpl22-rps19 25781 25869 0 89 LSC 0.022472 2 0 61 60 no 1.000000 2 1.000000 NA 1.000000 54.900000 rps19 gene rps19 rps19 25870 26148 -1 279 LSC 0.003584 1 0 27 86 no 1.000000 2 1.000000 NA 1.000000 41.600000 IGS_023 igs rps19|rpl2 rps19-rpl2 26149 26761 0 613 LSC 0.103873 59 45 218 135 yes 1.000000 2 1.000000 NA 0.926591 92.600000 rpl2 gene rpl2 rpl2 26762 28324 -1 1563 LSC 0.011681 18 22 58 35 no 1.000000 2 1.000000 NA 0.985925 54.300000 IGS_024 igs rpl2|rpl23 rpl2-rpl23 28325 28828 0 504 IRb 0.087571 31 150 119 131 yes 1.000000 2 1.000000 NA 0.702381 78.700000 rpl23 gene rpl23 rpl23 28829 28948 -1 120 IRb 0.000000 0 0 56 11 no 0.000000 1 0.000000 NA 1.000000 19.600000 IGS_025 igs rpl23|trnI-CAU rpl23-trnI-CAU 28949 29109 0 161 IRb 0.006211 1 0 176 300 no 1.000000 2 1.000000 NA 1.000000 54.300000 trnI-CAU tRNA trnI-CAU trnI-CAU 29110 29183 -1 74 IRb 0.000000 0 0 149 270 no 0.000000 1 0.000000 NA 1.000000 29.900000 IGS_026 igs trnI-CAU|ycf2 trnI-CAU-ycf2 29184 29369 0 186 IRb 0.000000 0 0 223 84 no 0.000000 1 0.000000 NA 1.000000 25.100000 ycf2 gene ycf2 ycf2 29370 36293 1 6924 IRb 0.002619 18 51 300 300 no 1.000000 2 1.000000 NA 0.992634 54.700000 IGS_027 igs ycf2|ndhB ycf2-ndhB 36294 37817 0 1524 IRb 0.014749 20 168 300 154 no 1.000000 2 1.000000 NA 0.889764 66.700000 ndhB gene ndhB ndhB 37818 38300 -1 483 IRb 0.002070 1 0 56 300 no 1.000000 2 1.000000 NA 1.000000 46.700000 IGS_028 igs ndhB|rps7 ndhB-rps7 38301 38614 0 314 IRb 0.000000 0 37 300 156 no 1.000000 2 1.000000 NA 0.882166 52.400000 rps7 gene rps7 rps7 38615 39082 -1 468 IRb 0.002137 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.200000 IGS_029 igs rps7|rps12 rps7-rps12 39083 39140 0 58 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps12_part2 gene rps12 rps12 39141 40855 -1 1715 IRb 0.036168 57 139 300 300 yes 1.000000 2 1.000000 NA 0.918950 82.700000 IGS_030 igs rps12|ycf1 rps12-ycf1 40856 40987 0 132 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ycf1 gene ycf1 ycf1 40988 42100 -1 1113 IRb 0.000903 1 6 300 2 no 1.000000 2 1.000000 NA 0.994609 44.900000 IGS_031 igs ycf1|rrn16 ycf1-rrn16 42101 43089 0 989 SSC 0.043981 19 557 66 255 no 1.000000 2 1.000000 NA 0.436805 63.900000 rrn16 rRNA rrn16 rrn16 43090 44580 1 1491 SSC 0.007378 11 0 21 101 no 1.000000 2 1.000000 NA 1.000000 49.600000 IGS_032 igs rrn16|rrn23 rrn16-rrn23 44581 46342 0 1762 SSC 0.088218 146 107 83 127 yes 1.000000 2 1.000000 NA 0.939274 86.800000 rrn23 rRNA rrn23 rrn23 46343 49161 1 2819 SSC 0.004257 12 0 136 35 no 1.000000 2 1.000000 NA 1.000000 46.100000 IGS_033 igs rrn23|rrn4.5 rrn23-rrn4.5 49162 49228 0 67 SSC 0.029851 2 0 300 33 no 1.000000 2 1.000000 NA 1.000000 57.100000 rrn4.5 rRNA rrn4.5 rrn4.5 49229 49331 1 103 SSC 0.009709 1 0 0 12 no 1.000000 2 1.000000 NA 1.000000 43.100000 IGS_034 igs rrn4.5|rrn5 rrn4.5-rrn5 49332 49514 0 183 SSC 0.057471 10 9 69 149 yes 1.000000 2 1.000000 NA 0.950820 76.800000 rrn5 rRNA rrn5 rrn5 49515 49635 1 121 SSC 0.000000 0 0 53 28 no 0.000000 1 0.000000 NA 1.000000 20.900000 IGS_035 igs rrn5|trnN-GUU rrn5-trnN-GUU 49636 51111 0 1476 SSC 0.083393 116 85 174 30 yes 1.000000 2 1.000000 NA 0.942412 83.000000 trnN-GUU tRNA trnN-GUU trnN-GUU 51112 51183 -1 72 SSC 0.013889 1 0 45 124 no 1.000000 2 1.000000 NA 1.000000 48.900000 IGS_036 igs trnN-GUU|ycf1 trnN-GUU-ycf1 51184 52062 0 879 SSC 0.129606 102 92 41 197 yes 1.000000 2 1.000000 NA 0.895336 85.100000 ycf1 gene ycf1 ycf1 52063 57708 1 5646 SSC 0.007831 44 27 69 300 no 1.000000 2 1.000000 NA 0.995218 47.600000 IGS_037 igs ycf1|rps12 ycf1-rps12 57709 57840 0 132 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps12_part2 gene rps12 rps12 57841 59555 1 1715 IRa 0.036168 57 139 300 300 yes 1.000000 2 1.000000 NA 0.918950 82.700000 IGS_038 igs rps12|rps7 rps12-rps7 59556 59613 0 58 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps7 gene rps7 rps7 59614 60081 1 468 IRa 0.002137 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.200000 IGS_039 igs rps7|ndhB rps7-ndhB 60082 60395 0 314 IRa 0.000000 0 37 156 300 no 1.000000 2 1.000000 NA 0.882166 52.400000 ndhB gene ndhB ndhB 60396 60878 1 483 IRa 0.002070 1 0 300 56 no 1.000000 2 1.000000 NA 1.000000 46.700000 IGS_040 igs ndhB|ycf2 ndhB-ycf2 60879 62402 0 1524 IRa 0.014749 20 168 154 300 no 1.000000 2 1.000000 NA 0.889764 66.700000 ycf2 gene ycf2 ycf2 62403 69326 -1 6924 IRa 0.002619 18 51 300 300 no 1.000000 2 1.000000 NA 0.992634 54.700000 IGS_041 igs ycf2|trnI-CAU ycf2-trnI-CAU 69327 69512 0 186 IRa 0.000000 0 0 84 223 no 0.000000 1 0.000000 NA 1.000000 25.100000 trnI-CAU tRNA trnI-CAU trnI-CAU 69513 69586 1 74 IRa 0.000000 0 0 270 149 no 0.000000 1 0.000000 NA 1.000000 29.900000 IGS_042 igs trnI-CAU|rpl23 trnI-CAU-rpl23 69587 69747 0 161 IRa 0.006211 1 0 300 176 no 1.000000 2 1.000000 NA 1.000000 54.300000 rpl23 gene rpl23 rpl23 69748 69867 1 120 IRa 0.000000 0 0 11 56 no 0.000000 1 0.000000 NA 1.000000 19.600000 IGS_043 igs rpl23|matK rpl23-matK 69868 4 0 635 IRa 0.068041 33 150 131 82 no 1.000000 2 1.000000 NA 0.763780 78.500000